TCONS_00053692 (transcript) - C. hemisphaerica

Overview
NameTCONS_00053692
Unique NameTCONS_00053692
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3818

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00053692 ID=TCONS_00053692|Name=TCONS_00053692|organism=Clytia hemisphaerica|type=transcript|length=3818bp
ATCAATGTTTGACCACTGCTCGCTCTCATCATCTTCCATTGAATTTGTAG
ATGGTAGCTGATGGAACTGCTTGCTCGAGATGTGATGGTCTCGTATCACT
GAGACCTCAAAAAATAAAGGATTTATGCATAATATTGAACAAAATGAGCA
AAGATACGAACGAGGGAAATAACAATACAACCAATGGACATAAAGGAGAA
GAATCTGATGAAAAACAAGTACAACCAACATCATGGACAGAACTTGAAAT
TGTCGGTAGCACACGAAATCTAAGTCCAACTTTATGGACTTTCACGCACC
TCACTGCCTTGTATCTTCGTGACAATGGGATTTCTAGAATACCTCCAGAA
GTTTCACGACTGAAGGGCCTCACTAAGCTTGATTTATCAAAGAACAAGAT
CAGAAGTTTACCTACTGAAATTGGTGACATGATTGAACTCAATGATTTGA
ATTTATCATACAACGCTCTGCGAGTATTACCAAATGAAATTGGACGTTTA
TTCAAGTTGAAAAGCTTAGGGCTGCAAGGAAATCCTCTTCCCTCAGAAAT
AATGAATCTAGGTTTAGATAATTTGTTGATGTATTTGCTTGGGAATTATA
CTGtttGTCCACGTCCACCAAACAGAGAATGGCTACCTGTTACGCAAAAT
ACGACAAAGAACGGAAGCTTCACGGTCATGTCATATAATGTCTTATGTGA
GAAATACACTACAAGGCAATTGTATGGCTACTGCCCTCAGTGGGCATTGG
CATGGGATTACAGAAAGAGTGCGATCTTAAAAGAAATCTTGCAATTCAAT
GCTGATGTATTGAGTTTACAGGAAATTGGAACAGAAGTATTTTGGAATTT
CTTCCTGCCAGAATTAAAAAAGAACGGCTATGAAGGGATCTTCAATCCCA
AGTCTCGAGCGAAAACCATGTCTGAAGAAGATCGTCGATATGTTGATGGA
TGTGCTATTTTCTGGAACTCTGCTAAATTCACATTGTTGAAAGAACATCT
TGTTGAGTTCAACCAGCTAGCAGCTGCGAATTGTGAAAATGCAGATGATA
TGTTAAACCGGGTGATGCAAAGAGATAACATTTGTATGATGGCTTTATTG
GAGACAACAGAACCAGTAGCAGAGCTGAATAACAGCAAAGGGAAGCTAGT
TGTCACCAATGCCCACATCCATTGGGATCCAGAATTTAAGGatgtaaaag
ttattcaatcCGTCATGTTGATGAGAGAGCTCAAGAACTTCCTGGAAGAA
TCTAACGGAGGAAAAGCGGGCTTGAAAACACCATTTGTCATTTGCGCTGA
CATGAATTCCTTGGTGGACTCTGGCGCCATCGAATATgttgaaaaaggga
aaatccCAATCAATCATCCAGATTTCAAGACCATGAAATATGGGGGTTTC
CTCTCAAAGCACACAgataaggagaagaaaaatggGGAGATGGTGACGCA
CCCTTTCAAGTTGAGTAGAGTTGCAAAAGAGAATGAACTGCCATTCACTA
ATTATACATATGACTTTGAAGGAGTGTTAGATTATATCTTCTATACTAAA
GATGAGTTGACAATCCTAGGTGAACTTGGTCCTGTTAACTTGGAATATCT
GAAGAAAAATAAAGTCATTGGGTTTCCACATCCTCATTTCCCGTCAGATC
ATATTTGTTTGGTTGTCGAGTTTGATTTCAAATTGCCTTCCAGGTAGTTT
GGACTCTCTTCAACCATCAATTATCTAAAACGGTGAATTGTtatgtgaat
ttttttaacgtGGAATACTTCTTCCAGATTTTACATCTTGTCGGATTTGA
GCACATTTCTTCCAACCTACATTTCCCACAACCCTGCATTTTTCTTTATG
GATGACATGGCTGGCAAAACTGAGATCAAAGTGTACTGGTtgcatcaaat
ttttcttttgcttgaCTCGTGGAAATCGGTTTTAACAATTATTTGTGAAT
TTCATCCCCTGCCCCCATTATTATATATGATGTTTAGTTGTTTTTGCTTT
GTTTAAAAACATATacaacaaattttttcattCCTAAATATATGAAAGAT
GTTAGGAAATTAAGATAAGTgccaaaaatgtaaaatttattcAAGTTTCT
TATAAATGTGgttattatatattattttttagatttttttgtcaCATTTT
TATTGATTCAAAACTAAATGATATTTTCCTAGCATTATTAGATTCTAGAT
CTTCGTTGAACGAATAACCACGTTCActaatctcataaaaaaagaaactg
tgatactttttttctctcaaactaCCTAGTGAACTACCTACCTAGTAAAT
TAGTTCTTTTTTGGTACAAAACTTTCTCACTGATATCattattgataaat
ttttaaaaacacctttttattgattttgaattttccatTCTGTTATCAAG
GGACCTTcgttaaaattagaaatgaagCAACATTTaggaagaaatttatt
ttctgGATAGAATTATGGTAAAAAGCCAATAATATgcataattttgattt
taccaTCTTGTTAATAATTATAACTACTGTAATAGTAATAGATCTTTTAA
GAAATCCTGTTTAGATTTTTAGAAAGTGACTATTTTTTCTTGTACAAAGT
ATAATAATATGGTGTGTAGGGATGTTAAGCATATTGTATCTattaaaaag
aacattttttaagctttttccaAACAAACCCAAAGTTTTCACAGATTGTT
CTGCTGATGAGATTTTCATTTGTCAATACTTTGACGACGTAAAGAGTTTT
AAGTTCATATGAATTACAAAGTCTGGAAGATTTCGCACGAAAAGGTAAGG
TAGCATTTTTATGGCATGTGAAAAGATAATGagtggaaaaatattttgtc
attaGAAGAAGTTTGAGATTGAGAACtgtacacttttttatataaattgt
GGAAAAACTCACTTTTAAGCATTTCAAATCTTGACtattcaccttttgtc
aaaataCGACTGGATAAGAAAAGATAATTCCAAACACCTGTGAATAAGAT
TGGCTTTTATTATGTAAAATACTACtgcaaagattttttttatcaaactc
taatgtttttggtcatttataatattttttgtgcACATGTGTATTAAAGC
GAAACCATAATTGTATTTGTGTAATATTGAACACCTATCACGCAAGAAGC
AATCTATTTTATTGACATTATAGTCAATGTACTGATAATACCACAGATCG
TAATTTACTTTAACTAAGGATTTTTTAAAGGTAATCTAAAATAATGTTTG
TCATTTCTTGAGATTTTTGttgtggtttttttttttggcgtgaGATCTAG
AACTTTGAATTATGCGATTTTTTTAAAACGAGATCTTCTAAAGGATGAAA
ACCCAGGTTTTTCTTAAATTtactttacattttattttaaaactaatTCT
TATTTATGTATAGCAAGTTAGAAGCAGTAGTCGTCAATTTTCACCTTAGC
CTAGCACTTTTATTTGTTGACAACCTTTTTAATCAATCTTATCAATGACG
TTCAGAACGAAATGTCATTTTGAAATGAATAAGTAAATAATAGTGATCAT
TGAACTACCTTTGTTTGTGgaaattgatataaaaataaCTTCGAACCATC
AGAACTAGTAACTCAAAGAGTCGAGAGCACTAGGTGAAATTGACAAACTG
CTATGATTTTATCCcagctttttttaaaaaaaataaagagacAGGTTGAT
GTATTTGTTTACTTCTGGTCATTGCAGAAGATGATATGAAAacagttgaa
aaagaaaaccacataaagattttaaacttaaaattctTTTATTCTATCAT
ATTGTAGTTCTTTATTTC
Run BLAST on NCBI

protein sequence of TCONS_00053692-protein

>TCONS_00053692-protein ID=TCONS_00053692-protein|Name=TCONS_00053692-protein|organism=Clytia hemisphaerica|type=polypeptide|length=548bp
MVADGTACSRCDGLVSLRPQKIKDLCIILNKMSKDTNEGNNNTTNGHKGE
ESDEKQVQPTSWTELEIVGSTRNLSPTLWTFTHLTALYLRDNGISRIPPE
VSRLKGLTKLDLSKNKIRSLPTEIGDMIELNDLNLSYNALRVLPNEIGRL
FKLKSLGLQGNPLPSEIMNLGLDNLLMYLLGNYTVCPRPPNREWLPVTQN
TTKNGSFTVMSYNVLCEKYTTRQLYGYCPQWALAWDYRKSAILKEILQFN
ADVLSLQEIGTEVFWNFFLPELKKNGYEGIFNPKSRAKTMSEEDRRYVDG
CAIFWNSAKFTLLKEHLVEFNQLAAANCENADDMLNRVMQRDNICMMALL
ETTEPVAELNNSKGKLVVTNAHIHWDPEFKDVKVIQSVMLMRELKNFLEE
SNGGKAGLKTPFVICADMNSLVDSGAIEYVEKGKIPINHPDFKTMKYGGF
LSKHTDKEKKNGEMVTHPFKLSRVAKENELPFTNYTYDFEGVLDYIFYTK
DELTILGELGPVNLEYLKKNKVIGFPHPHFPSDHICLVVEFDFKLPSR
Run BLAST on NCBI

transcript from alignment at scaffold_233:1025926..1036348-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00053692 ID=TCONS_00053692|Name=TCONS_00053692|organism=Clytia hemisphaerica|type=transcript|length=10423bp|location=Sequence derived from alignment at scaffold_233:1025926..1036348- (Clytia hemisphaerica)
ATCAATGTTTGACCACTGCTCGCTCTCATCATCTTCCATTGAATTTGTAG
ATGGTAGCTGATGGAACTGCTTGCTCGAGATGTGATGGTCTCGTATCACT
GAGACCTCAAAAAATAAAGGATTTATGCATAATATTGAACAAAATGAGCA
AAGATACGAACGAGGGAAATAACAATACAACCAATGGACATAAAGGAGAA
GAATCTGATGAAAAACAAGTACAACCAACATCATGGACAGAACTTGAAAT
TGTCGGTAGCACACGAAATCTAAGTCCAACTTTATGGACTTTCACGCACC
TCACTGCCTTGTATCTTCGTGACAATGGGATTTCTAGAATACCTCCAGAA
GTTTCACGACTGAAGGGCCTCACTAAGCTTGATTTATCAAAGAACAAGAT
CAGAAGTTTACCTACTGAAATTGGTGACATGATTGAACTCAATGATTTGA
ATTTATCATACAACGCTCTGCGAGTATTACCAAATGAAATTGGACGTTTA
TTCAAGTTGAAAAGCTTAGGGCTGCAAGGAAATCCTCTTCCCTCAGAAAT
AATGAATCTAGGTTTAGATAATTTGTTGATGTATTTGCTTGGGAATTATA
CTGGTAAGCTAGCTAGGTCTTTTTTTGTGATCTCAAATAGAGGCAATCAA
TTAATTATCCCCTTCATTTTAACTGTCCCGTTATTACCGGTTGGCAAACA
ATATCATCCACCAGGATGCTTTGTCTCTTATGTTCCCCCTATTTTCTACT
TTCCTATCTTCTATCCTGCTGATTTTCTGACTTTCTCAAGTGTTCTATAA
CTGTTTTCTAAGTATTTTTTCTGAAATTTGCCTGTACCGGTGGTCTCCGA
CCCCGGATCAAACCACCAAATACAAGCAACCTTGGTTTACAAACCCAATG
CCGCTTGCGCCAACAAGACACGACGAAGATCCATCAATCACAAATATACT
TATAGCGTGTAATTTGCAGACCTTAATTAAAAAAGCTCCCAACCCTACCA
GTGCCCCTACAAGGATCCCTACAGTACAGGATCCTAAGGTAAGTCTCAGG
GTACGAAGTGCCCCTAAGAAGGCCTTCAACCTTATTTTGTGACTCTCGAG
CTCCATCCCTAACCCTAACTGATGATAACCGAACCACCGTCTAGGTCCGC
AGATTGAAAAACTTCACTTGCATTCTGCCTGGTGGATGATATCGTCTGCC
AACCGTTATTACCCAAGATTACTATATATAAAAATAAAAAGAAGGGGACA
TCCCTAAAAATGGTGTTATTTTTATAAATTTGGATTTACATGGAGACGAT
TTTGTAGATAAAATGGCTGGCAAACCATATTATACTCCAGGATGCAAGTC
ACAGATTGTTGATGTATGAGAAATGTGTCTTTTTGAAAGGAAAACTTTTT
AAACGAAGTAATCAATACTGAAAAAACTAATTGGCAATGCTTCCCACAAA
GATTACAAAATCAAAACAACTTTTTGCATGCAAGGAATTTTTTAGTATGC
CTATTTGTCGTGAACCAAAAATGATAAAAAGAACCCAGTTTCCTTTTGTT
TGATGTGACCACCATACCGCCAACAACTCTGCCTTGCCGTCTCGCCGATC
AAAATGAAAATAGGTAGTCCTGTGTGTGTGTGGCTTCTTAGCGCCTAGAG
CGTGTGCTTACAATGAATAATAAGGACAGGGAAACCAGTTCCTAAGCTAG
TCTGAGAAAACCTCTTAGTTGTATGCTTGACTCCCAAGGCTGTAAGTAAG
TGCGCAATTACACAGTTAAAATTTACGCAAACGCCCGTGTGCAATCTGGT
GCAACTGCACGCTTATGATCCCGCCCGGGTTGAGATTGCTTGAGCAGATT
ATAGAGGGTTCAGATTTTTCAAAATTGGGCGAATACATGGTCAAACAGGC
AAAAGTTTCCAACATGATCATTTTCTACAATAAATTTTGAGTAAGATGTC
CAAGGCTTTCCAATTTCAACGAAGCGATCAGAAGCAAAAAAAGGTTTTTT
AAATGATAAGACTACAATCAACGCCAAAATATTTGGAACAAAAGGGGAAT
TCCCTCAAAACTTCAAAAACCGCAAGTGATTTGTGTTTTGAAGTACAGTT
TGGAAGTAGAGTTTTAACTCTGACAGCTACCTTAAGGGCAGAAATATTCG
CGAGAAGAAATTTTCGCGGAATTTAATTTCGCGAATCAGAGCTTCAAAAT
GGCAAATTTCGCGGAATTTAATTTCGCGAATGGGCCGATTTCAAAAGTTT
CACGGAATTTAATTTCGCGGTTGAGGGAATTATTTGTCTACGAAAAGCCC
TATTTTGCCCTAAAAAGACCAGTTTTAGGGGGGATTTTTTTAATTGTGAG
AATATTTATGTTTCGCGGAATTTAATTTCGCGAATCAGAGCTTCAAAATG
GCGAATTTCGCGGAATTTAATTTCGCGAATCAGAGCTTCAAAATGGCGAA
TTTCGCGGAATTTAATTTCGCGAATCAGAGCTTCAAAATGGCGAATTTCG
CGGAATTTAATTTCGCGAATCAGAGCTTCAAAATGGCGAATTTCGCGGAA
TTTAATTTCGCGAATCAGAGCTTCAAAATGGCGAATTTCGCGGAATTTAA
TTTCGCGAATCAGAGCTTCAAAATGGCGAATTTCGCGGAATTTAATTTCG
CGAATCAGAGCTTCAAAATGGCGAATTTCGCGGAATTTAATTTCGCGAAT
CAGAGCTTCAAAATGGCGAATTTCGCGGAATTTAATTTCGCGAATCAGAG
CTTCAAAATGGCGAATTTCGCGGAATTTAATTTCGCGAATCAGAGCTTCA
AAATGGCGAATTTCGCGGAATTTAATTTCGCGAATCAGAGCTTCAAAATG
GCGAATTTCGCGGAATTTAATTTCGCGAATCAGAGCTTCAAAATGGCGAA
TTTCGCGGAATTTAATTTCGCGAATCAGAGCTTCAAAATGGCGAATTTCG
CGGAATTTAATTTCGCGAATCAGAGCTTCAAAATGGCGAATTTCGCGGAA
TTTAATTTCGCGAATCAGAGCTTCAAAATGGCGAATTTCGCGGAATTTAA
TTTCGCGAATCAGAGCTTCAAAATGGCGAATTTCGCGGAATTTAATTTCG
CGAATCAGAGCTTCAAAATGGCGAATTTCGCGGAATTTAATTTCGCGAAT
CAGAGCTTCAAAATGGCGAATTTCGCGGAATTTAATTTCGCGAATCAGAG
CTTCAAAATGGCGAATTTCGCGGAATTTAATTTCGCGAATTATGCCCAAA
TTCGCGAAATTAAATTCCGCGAAAATTTCTTCCGCGAAAATTTCTTCTCG
CGAAAATTTCTTCCCTTAAGGTAGGTAAAATCCATGTGTTTCCATTTCAA
GAAATTTTGCGCAAGTCATCGATGACTCAAGAAATCAACATTATAAACCA
ATAAAAGATCAAAGAGAAAAGCCTTAAGTGGGAAAAAATGAGGTTTGCCA
ATCTTGGGGATTTCCCAAGCTCAAGATTAAGTTGCCAGGTTTCATCATAA
GTTTTCCTGTGGTATATATATATGAAGACTCCCCGGATTGGCGAACATGA
ACGAATAGGAGAAAAACTAAAAACTCACACCTGGAAAAAATTTACATTGT
TCTATTTTGTTCAATCACAAACGCTCATGAAAGCGCCAAATATTTTACTA
TCCAATCACGGCGATATCAATTGTTTTATTTTGTCCAATCAAAAAATTGT
TGTACGATTGTTTAAAAAGAAGTATCCAATCAAATGAGGGTAAAAGGGCT
TTCATCCAATCAGAACAGAAAGGATTCTTTGAAAAAATAATCTGTTCTGA
TTGGATGAAAGCCCTTTTACCTTAATTTGATTGCATCAAATTCCTGCTTT
CGTTTAAAAACTAAATTCATCCCTTAGAATCAACGATTGAAACAAATAAA
GTTAATTGACTACTCATTATCCAAGGTGCCGAAAAGCCATTAGCGCAAAA
AAGTAGGGTCAGTCATTAACCTTCATCATACATGGCAATCTCATTGGTTG
AAATTTAAAAAAGACTTTCAGATGGAGCGAATTACGGAAACAACTAAGAA
GAAGGGACCACTTTTGTTTTTATTGCAGATTTCGATATAAAAATTGCATG
GGGAATACTTCTGTCAATGTGTATTATGTGTCAAATATGTATATAAGCAT
TGTATTGTTGGAATAGAAAAGAGAGAAGAGGTAAGTCTAGTCTAGCCAAA
TTGTCAGCTGTCAGAGGGCGTAAAAATAATGTGAGAGCTTATTCGTATCA
AAAGCAAAACACACAGATTTTACCAAGACTTAAGACTTAAGACCTTAGGA
TCTCAGGATCTCAAAGCTCAAAAATGTTCCAATAAGCCTGAGTTCCGCCC
GCATACCTTAGAATATGTCCTGTATTTTCGAGAAAACTCAGAAATTCGTA
GAACTCTTGGAAAAAAATATAGAAATGCTACTAAAAATATGTTTCCACAA
GCACAAACTCACTTCCTCGTTTTTTCTCTTTGCTCTGTAACGGCCCGTCC
AATTGCGTGCGTATTCGATACATCGGATATGCGTTGGACAGAGATGTCGA
AGCGAAGAAAGCAAAAAGATTGACCAGCTTTGATCATGTATTGTTTTAGC
CATTCCTATGTCATTTCAGGCCCAAAAAAAAAATTTCTAACACCCCCGTG
GGGGGGAGCTTAAAGCATCCCCCAAACCCCCAGCTCAATTTTTCTCGCTC
GTTCCGCTCGCTCGTACCGCATTTTCATTCTCATAAGTTGGCAACTATGT
GTAATTTTAAGGATGGACACAAGTATTTTGCATGTGTTTCATGTGTTTTG
TTTAAAATTCCTACGTCATTTCAGACTGTTTTTTTAATTGAATATTGAAA
GAATTTTGAAATGTTTACTGAACTTCTAGTTTGATAAATGAACTTGTTTG
TTTGAGTACCGTGAACTTGGGTAACTTGCATCAGTGGATGCATCAAATGC
CTGACCAATCAAGGCAGCAAAATTTCAAAACAAATGGAGCAGTGCAAGAA
CTGCGAGTTTCTCACCGACATAATTGCAGGTAAATAAAACAGCATGGTTG
GACAATAAAAAATCATGCAAGATCATAAATTTTAAGATGGCAGGAATTCA
GATGTTTCTCGATGGCTGCTGGATGTAATCTCAAATTTAATAATGATATT
AAACACACTTATGTATGACATCGCTTTTATGATTAGGAGATACACATTTT
ACAACCTGCAAATTTTGTAAATCAGGTTTATTTTGATTTAACTTTGTATT
TTGATAATAACAAACTAGGTCATTTATTTGAGGACTATGCATGTTAGCCT
CCACTGATGCAAGTTACAGGATCTCACGGTAATACATAGCGTCAGCCTGG
GTTTAGTACAATTCCCAACTGTATAAACAAAGGAAAAACTTGAATTACAA
ATTTGTATCCACAAACATTCTGATACAAAAACATAGATTTTTGTTTAGTG
TTTTTTTCTTAATATTTTCTATTTCTATGCGGGATTGCTGTCTTTCAGGG
GCTCCTTTTCTTTTATTTTCCTAGGGGCTTTTGCCAAAACTATGATTTTA
AATGATTTCCTGAGGACTAATTTTCAAGAACATGGCCAAAAATTGCAAAT
ATTGTTAAAATCAATTCACACAAAATTTAAAATCCACTTAAGGTAGTGAT
TCATTCATTCATTCATTTATTTTCAGTTTGTCCACGTCCACCAAACAGAG
AATGGCTACCTGTTACGCAAAATACGACAAAGAACGGTTTGTTCAAATGA
CTTGTCCTTGAAAAAGATTTTTATAAGAAATTTTTCTATTGCTATCTTAT
TTCTTACCCATCAATAGTTGCTTGATTAAAATGAAATTCATTCATGATCC
AAAATAATAGTGTTATGTCCTCTAGCATTTAGTAAGTAAACACACAGAAA
AGATCTTTTCCCTAGGGTAATTCGACCCAGCATTAATCCATTAGTCCATA
AATCATATCATACAACTCTGTACAACTCCCTTTTTAGGAAGCTTCACGGT
CATGTCATATAATGTCTTATGTGAGAAATACACTACAAGGCAATTGTATG
GCTACTGCCCTCAGTGGGCATTGGCATGGGATTACAGAAAGAGTGCGATC
TTAAAAGAAATCTTGCAATTCAATGCTGATGTATTGAGTTTACAGGTATG
TAGTTTACATAAAGTTTGGCTGAGAAACTACTTTTCTTTTCGTAGTATGA
TGAAATTCTCAACTTCAGTTGAGCTAGAATCTGAGAATGTCTGTGTGTAT
GTCTCAAAACTTTGGGGCAGCCTGGAGACTTCAAAAATTATCAGATTTGG
CTGAAATTGGGCACACTTGTTCCTTCAGTGAATATAAAGTTATTCAAATT
ATTTAAAATTTTCAAATTAACCCCCAGTTGTTTTTTTTTCAAAAATTTTG
ATTTTTGGGTCGTGGAGACAAGTTTTAAAACTAGTTTGTTTTGCTACAAT
CGGGTTTTTGAATAATCTGAAGCTACTGAAGTTAAGCCCACCCAGAGCAT
TGTGCACGTTCGTTATTTTGTATGGATGGGTGAATATTGAGAAACTGATT
CCATACACGGTTTTTTTTTTAAGCTACTAGTTTTACCAAGCAGCCTCAAT
GTTTCTTAAGAAATTGGCTATTTGAGCCTTAAATGTTTCTTACATGTTTC
TAAACTTTTTGACATAATCAGCCTTATGGAAGGCTGGATTGGAAGGTTCT
TAAAAAAAACGAATTAAAAAATGTTATTTTCTCATTCTCAGCCTCGGCAT
GTTTCTTAGATGTTTGTTAGTTTTTAGGCATTCTGAGTTTTTAGGCATTC
TTGTTTCTTAAAAGTGTGTTTCTTAAAATAAAAAAAACGTGTATTCAGAG
AGAAAACCTGTTCAATTAAATTGTATACACATCGATTAATTACTTTCCAA
AAGTTTTCACTTATGTTTTTTCCTTTAGGAAATTGGAACAGAAGTATTTT
GGAATTTCTTCCTGCCAGAATTAAAAAAGAACGGCTATGAAGGGATCTTC
AATCCCAAGTCTCGAGCGAAAACCATGTCTGAAGAAGATCGTCGATATGT
TGATGGATGTGCTATTTTCTGGAACTCTGCTAAGTAAAAGGACTTTTCAG
TCAGGGCACATAAATCAAATCAATATTGAAGTCATGTTATGTGAATTGTA
TTCTTACATTTTAACAAGGATTTCTCATGAATAATTTCTCTTTTTTGAAA
GTTTTTTCTATTTAATTTGAAAAAGAATTTGTGTACCTTGCAGCTCTACT
GCAACACTCTAGTTTCTTTGAATGTATAGAATTTTTCTGAATTTATTTGT
GTTGTATTCTTCCTTAGATTCACATTGTTGAAAGAACATCTTGTTGAGTT
CAACCAGCTAGCAGCTGCGAATTGTGAAAATGCAGATGATATGTTAAACC
GGGTGATGCAAAGAGATAACATTTGTATGATGGCTTTATTGGAGACAACA
GAACCAGTAGCAGAGCTGAATAACAGCAAAGGGAAGCTAGTTGTCACCAA
TGCCCACATCCATTGGGATCCAGAATTTAAGGATGTAAAAGTTATTCAAT
CCGTCATGTTGATGAGAGAGCTCAAGAACTTCCTGGAAGAATCTAACGGA
GGTATAACTAAAGTCCTTCCTAGATTAGTTATCCATAAATGTTCATACGA
TTATAACTTATGAATTTCAACAGGGTATTTTTGGATGAATTAAATCTGTT
TGCAGTGAAATTAAAAATTATCCTAAATAGAAGACCGTTTTAACTGATAC
TGAGAAAAAGAAATTCTATTCTATTCTATAATGGTGACATTTCAACTTGA
CCAATATTTTAAATGTCTTAATATTTAAGTCTTCAATCTTTAATAAATCC
TTCTCTTTTCTTCAGGAAAAGCGGGCTTGAAAACACCATTTGTCATTTGC
GCTGACATGAATTCCTTGGTGGACTCTGGCGCCATCGAATATGTTGAAAA
AGGGAAAATCCCAATCAATCATCCAGATTTCAAGACCATGAAATATGGGG
GTTTCCTCTCAAAGCACACAGATAAGGAGAAGAAAAATGGGGAGATGGTG
ACGCACCCTTTCAAGTTGAGTAGAGTTGCAAAAGAGAATGAACTGCCATT
CACTAATTATACATATGACTTTGAAGGAGTGTTAGATTATATCTTCTATA
CTAAAGATGAGTTGACAATCCTAGGTGAACTTGGTCCTGTTAACTTGGAA
TATCTGAAGAAAAATAAAGTCATTGGGTTTCCACATCCTCATTTCCCGTC
AGATCATATTTGTTTGGTTGTCGAGTTTGATTTCAAATTGCCTTCCAGGT
AGTTTGGACTCTCTTCAACCATCAATTATCTAAAACGGTGAATTGTTATG
TGAATTTTTTTAACGTGGAATACTTCTTCCAGATTTTACATCTTGTCGGA
TTTGAGCACATTTCTTCCAACCTACATTTCCCACAACCCTGCATTTTTCT
TTATGGATGACATGGCTGGCAAAACTGAGATCAAAGTGTACTGGTTGCAT
CAAATTTTTCTTTTGCTTGACTCGTGGAAATCGGTTTTAACAATTATTTG
TGAATTTCATCCCCTGCCCCCATTATTATATATGATGTTTAGTTGTTTTT
GCTTTGTTTAAAAACATATACAACAAATTTTTTCATTCCTAAATATATGA
AAGATGTTAGGAAATTAAGATAAGTGCCAAAAATGTAAAATTTATTCAAG
TTTCTTATAAATGTGGTTATTATATATTATTTTTTAGATTTTTTTGTCAC
ATTTTTATTGATTCAAAACTAAATGATATTTTCCTAGCATTATTAGATTC
TAGATCTTCGTTGAACGAATAACCACGTTCACTAATCTCATAAAAAAAGA
AACTGTGATACTTTTTTTCTCTCAAACTACCTAGTGAACTACCTACCTAG
TAAATTAGTTCTTTTTTGGTACAAAACTTTCTCACTGATATCATTATTGA
TAAATTTTTAAAAACACCTTTTTATTGATTTTGAATTTTCCATTCTGTTA
TCAAGGGACCTTCGTTAAAATTAGAAATGAAGCAACATTTAGGAAGAAAT
TTATTTTCTGGATAGAATTATGGTAAAAAGCCAATAATATGCATAATTTT
GATTTTACCATCTTGTTAATAATTATAACTACTGTAATAGTAATAGATCT
TTTAAGAAATCCTGTTTAGATTTTTAGAAAGTGACTATTTTTTCTTGTAC
AAAGTATAATAATATGGTGTGTAGGGATGTTAAGCATATTGTATCTATTA
AAAAGAACATTTTTTAAGCTTTTTCCAAACAAACCCAAAGTTTTCACAGA
TTGTTCTGCTGATGAGATTTTCATTTGTCAATACTTTGACGACGTAAAGA
GTTTTAAGTTCATATGAATTACAAAGTCTGGAAGATTTCGCACGAAAAGG
TAAGGTAGCATTTTTATGGCATGTGAAAAGATAATGAGTGGAAAAATATT
TTGTCATTAGAAGAAGTTTGAGATTGAGAACTGTACACTTTTTTATATAA
ATTGTGGAAAAACTCACTTTTAAGCATTTCAAATCTTGACTATTCACCTT
TTGTCAAAATACGACTGGATAAGAAAAGATAATTCCAAACACCTGTGAAT
AAGATTGGCTTTTATTATGTAAAATACTACTGCAAAGATTTTTTTTATCA
AACTCTAATGTTTTTGGTCATTTATAATATTTTTTGTGCACATGTGTATT
AAAGCGAAACCATAATTGTATTTGTGTAATATTGAACACCTATCACGCAA
GAAGCAATCTATTTTATTGACATTATAGTCAATGTACTGATAATACCACA
GATCGTAATTTACTTTAACTAAGGATTTTTTAAAGGTAATCTAAAATAAT
GTTTGTCATTTCTTGAGATTTTTGTTGTGGTTTTTTTTTTTGGCGTGAGA
TCTAGAACTTTGAATTATGCGATTTTTTTAAAACGAGATCTTCTAAAGGA
TGAAAACCCAGGTTTTTCTTAAATTTACTTTACATTTTATTTTAAAACTA
ATTCTTATTTATGTATAGCAAGTTAGAAGCAGTAGTCGTCAATTTTCACC
TTAGCCTAGCACTTTTATTTGTTGACAACCTTTTTAATCAATCTTATCAA
TGACGTTCAGAACGAAATGTCATTTTGAAATGAATAAGTAAATAATAGTG
ATCATTGAACTACCTTTGTTTGTGGAAATTGATATAAAAATAACTTCGAA
CCATCAGAACTAGTAACTCAAAGAGTCGAGAGCACTAGGTGAAATTGACA
AACTGCTATGATTTTATCCCAGCTTTTTTTAAAAAAAATAAAGAGACAGG
TTGATGTATTTGTTTACTTCTGGTCATTGCAGAAGATGATATGAAAACAG
TTGAAAAAGAAAACCACATAAAGATTTTAAACTTAAAATTCTTTTATTCT
ATCATATTGTAGTTCTTTATTTC

Coding sequence (CDS) from alignment at scaffold_233:1025926..1036348-

>TCONS_00053692 ID=TCONS_00053692|Name=TCONS_00053692|organism=Clytia hemisphaerica|type=CDS|length=9882bp|location=Sequence derived from alignment at scaffold_233:1025926..1036348- (Clytia hemisphaerica)
GAAAAGCGGGCTTGAAAACACCATTTGTCATTTGCGCTGACATGAATTCC
TTGGTGGACTCTGGCGCCATCGAATATGTTGAAAAAGGGAAAATCCCAAT
CAATCATCCAGATTTCAAGACCATGAAATATGGGGGTTTCCTCTCAAAGC
ACACAGATAAGGAGAAGAAAAATGGGGAGATGGTGACGCACCCTTTCAAG
TTGAGTAGAGTTGCAAAAGAGAATGAACTGCCATTCACTAATTATACATA
TGACTTTGAAGGAGTGTTAGATTATATCTTCTATACTAAAGATGAGTTGA
CAATCCTAGGTGAACTTGGTCCTGTTAACTTGGAATATCTGAAGAAAAAT
AAAGTCATTGGGTTTCCACATCCTCATTTCCCGTCAGATCATATTTGTTT
GGTTGTCGAGTTTGATTTCAAATTGCCTTCCAGGTAGATTCACATTGTTG
AAAGAACATCTTGTTGAGTTCAACCAGCTAGCAGCTGCGAATTGTGAAAA
TGCAGATGATATGTTAAACCGGGTGATGCAAAGAGATAACATTTGTATGA
TGGCTTTATTGGAGACAACAGAACCAGTAGCAGAGCTGAATAACAGCAAA
GGGAAGCTAGTTGTCACCAATGCCCACATCCATTGGGATCCAGAATTTAA
GGATGTAAAAGTTATTCAATCCGTCATGTTGATGAGAGAGCTCAAGAACT
TCCTGGAAGAATCTAACGGAGGAAATTGGAACAGAAGTATTTTGGAATTT
CTTCCTGCCAGAATTAAAAAAGAACGGCTATGAAGGGATCTTCAATCCCA
AGTCTCGAGCGAAAACCATGTCTGAAGAAGATCGTCGATATGTTGATGGA
TGTGCTATTTTCTGGAACTCTGCTAAGAAGCTTCACGGTCATGTCATATA
ATGTCTTATGTGAGAAATACACTACAAGGCAATTGTATGGCTACTGCCCT
CAGTGGGCATTGGCATGGGATTACAGAAAGAGTGCGATCTTAAAAGAAAT
CTTGCAATTCAATGCTGATGTATTGAGTTTACAGTTTGTCCACGTCCACC
AAACAGAGAATGGCTACCTGTTACGCAAAATACGACAAAGAACGATGGTA
GCTGATGGAACTGCTTGCTCGAGATGTGATGGTCTCGTATCACTGAGACC
TCAAAAAATAAAGGATTTATGCATAATATTGAACAAAATGAGCAAAGATA
CGAACGAGGGAAATAACAATACAACCAATGGACATAAAGGAGAAGAATCT
GATGAAAAACAAGTACAACCAACATCATGGACAGAACTTGAAATTGTCGG
TAGCACACGAAATCTAAGTCCAACTTTATGGACTTTCACGCACCTCACTG
CCTTGTATCTTCGTGACAATGGGATTTCTAGAATACCTCCAGAAGTTTCA
CGACTGAAGGGCCTCACTAAGCTTGATTTATCAAAGAACAAGATCAGAAG
TTTACCTACTGAAATTGGTGACATGATTGAACTCAATGATTTGAATTTAT
CATACAACGCTCTGCGAGTATTACCAAATGAAATTGGACGTTTATTCAAG
TTGAAAAGCTTAGGGCTGCAAGGAAATCCTCTTCCCTCAGAAATAATGAA
TCTAGGTTTAGATAATTTGTTGATGTATTTGCTTGGGAATTATACTGGAA
AAGCGGGCTTGAAAACACCATTTGTCATTTGCGCTGACATGAATTCCTTG
GTGGACTCTGGCGCCATCGAATATGTTGAAAAAGGGAAAATCCCAATCAA
TCATCCAGATTTCAAGACCATGAAATATGGGGGTTTCCTCTCAAAGCACA
CAGATAAGGAGAAGAAAAATGGGGAGATGGTGACGCACCCTTTCAAGTTG
AGTAGAGTTGCAAAAGAGAATGAACTGCCATTCACTAATTATACATATGA
CTTTGAAGGAGTGTTAGATTATATCTTCTATACTAAAGATGAGTTGACAA
TCCTAGGTGAACTTGGTCCTGTTAACTTGGAATATCTGAAGAAAAATAAA
GTCATTGGGTTTCCACATCCTCATTTCCCGTCAGATCATATTTGTTTGGT
TGTCGAGTTTGATTTCAAATTGCCTTCCAGGTAGATTCACATTGTTGAAA
GAACATCTTGTTGAGTTCAACCAGCTAGCAGCTGCGAATTGTGAAAATGC
AGATGATATGTTAAACCGGGTGATGCAAAGAGATAACATTTGTATGATGG
CTTTATTGGAGACAACAGAACCAGTAGCAGAGCTGAATAACAGCAAAGGG
AAGCTAGTTGTCACCAATGCCCACATCCATTGGGATCCAGAATTTAAGGA
TGTAAAAGTTATTCAATCCGTCATGTTGATGAGAGAGCTCAAGAACTTCC
TGGAAGAATCTAACGGAGGAAATTGGAACAGAAGTATTTTGGAATTTCTT
CCTGCCAGAATTAAAAAAGAACGGCTATGAAGGGATCTTCAATCCCAAGT
CTCGAGCGAAAACCATGTCTGAAGAAGATCGTCGATATGTTGATGGATGT
GCTATTTTCTGGAACTCTGCTAAGAAGCTTCACGGTCATGTCATATAATG
TCTTATGTGAGAAATACACTACAAGGCAATTGTATGGCTACTGCCCTCAG
TGGGCATTGGCATGGGATTACAGAAAGAGTGCGATCTTAAAAGAAATCTT
GCAATTCAATGCTGATGTATTGAGTTTACAGTTTGTCCACGTCCACCAAA
CAGAGAATGGCTACCTGTTACGCAAAATACGACAAAGAACGATGGTAGCT
GATGGAACTGCTTGCTCGAGATGTGATGGTCTCGTATCACTGAGACCTCA
AAAAATAAAGGATTTATGCATAATATTGAACAAAATGAGCAAAGATACGA
ACGAGGGAAATAACAATACAACCAATGGACATAAAGGAGAAGAATCTGAT
GAAAAACAAGTACAACCAACATCATGGACAGAACTTGAAATTGTCGGTAG
CACACGAAATCTAAGTCCAACTTTATGGACTTTCACGCACCTCACTGCCT
TGTATCTTCGTGACAATGGGATTTCTAGAATACCTCCAGAAGTTTCACGA
CTGAAGGGCCTCACTAAGCTTGATTTATCAAAGAACAAGATCAGAAGTTT
ACCTACTGAAATTGGTGACATGATTGAACTCAATGATTTGAATTTATCAT
ACAACGCTCTGCGAGTATTACCAAATGAAATTGGACGTTTATTCAAGTTG
AAAAGCTTAGGGCTGCAAGGAAATCCTCTTCCCTCAGAAATAATGAATCT
AGGTTTAGATAATTTGTTGATGTATTTGCTTGGGAATTATACTGGAAAAG
CGGGCTTGAAAACACCATTTGTCATTTGCGCTGACATGAATTCCTTGGTG
GACTCTGGCGCCATCGAATATGTTGAAAAAGGGAAAATCCCAATCAATCA
TCCAGATTTCAAGACCATGAAATATGGGGGTTTCCTCTCAAAGCACACAG
ATAAGGAGAAGAAAAATGGGGAGATGGTGACGCACCCTTTCAAGTTGAGT
AGAGTTGCAAAAGAGAATGAACTGCCATTCACTAATTATACATATGACTT
TGAAGGAGTGTTAGATTATATCTTCTATACTAAAGATGAGTTGACAATCC
TAGGTGAACTTGGTCCTGTTAACTTGGAATATCTGAAGAAAAATAAAGTC
ATTGGGTTTCCACATCCTCATTTCCCGTCAGATCATATTTGTTTGGTTGT
CGAGTTTGATTTCAAATTGCCTTCCAGGTAGATTCACATTGTTGAAAGAA
CATCTTGTTGAGTTCAACCAGCTAGCAGCTGCGAATTGTGAAAATGCAGA
TGATATGTTAAACCGGGTGATGCAAAGAGATAACATTTGTATGATGGCTT
TATTGGAGACAACAGAACCAGTAGCAGAGCTGAATAACAGCAAAGGGAAG
CTAGTTGTCACCAATGCCCACATCCATTGGGATCCAGAATTTAAGGATGT
AAAAGTTATTCAATCCGTCATGTTGATGAGAGAGCTCAAGAACTTCCTGG
AAGAATCTAACGGAGGAAATTGGAACAGAAGTATTTTGGAATTTCTTCCT
GCCAGAATTAAAAAAGAACGGCTATGAAGGGATCTTCAATCCCAAGTCTC
GAGCGAAAACCATGTCTGAAGAAGATCGTCGATATGTTGATGGATGTGCT
ATTTTCTGGAACTCTGCTAAGAAGCTTCACGGTCATGTCATATAATGTCT
TATGTGAGAAATACACTACAAGGCAATTGTATGGCTACTGCCCTCAGTGG
GCATTGGCATGGGATTACAGAAAGAGTGCGATCTTAAAAGAAATCTTGCA
ATTCAATGCTGATGTATTGAGTTTACAGTTTGTCCACGTCCACCAAACAG
AGAATGGCTACCTGTTACGCAAAATACGACAAAGAACGATGGTAGCTGAT
GGAACTGCTTGCTCGAGATGTGATGGTCTCGTATCACTGAGACCTCAAAA
AATAAAGGATTTATGCATAATATTGAACAAAATGAGCAAAGATACGAACG
AGGGAAATAACAATACAACCAATGGACATAAAGGAGAAGAATCTGATGAA
AAACAAGTACAACCAACATCATGGACAGAACTTGAAATTGTCGGTAGCAC
ACGAAATCTAAGTCCAACTTTATGGACTTTCACGCACCTCACTGCCTTGT
ATCTTCGTGACAATGGGATTTCTAGAATACCTCCAGAAGTTTCACGACTG
AAGGGCCTCACTAAGCTTGATTTATCAAAGAACAAGATCAGAAGTTTACC
TACTGAAATTGGTGACATGATTGAACTCAATGATTTGAATTTATCATACA
ACGCTCTGCGAGTATTACCAAATGAAATTGGACGTTTATTCAAGTTGAAA
AGCTTAGGGCTGCAAGGAAATCCTCTTCCCTCAGAAATAATGAATCTAGG
TTTAGATAATTTGTTGATGTATTTGCTTGGGAATTATACTGGAAAAGCGG
GCTTGAAAACACCATTTGTCATTTGCGCTGACATGAATTCCTTGGTGGAC
TCTGGCGCCATCGAATATGTTGAAAAAGGGAAAATCCCAATCAATCATCC
AGATTTCAAGACCATGAAATATGGGGGTTTCCTCTCAAAGCACACAGATA
AGGAGAAGAAAAATGGGGAGATGGTGACGCACCCTTTCAAGTTGAGTAGA
GTTGCAAAAGAGAATGAACTGCCATTCACTAATTATACATATGACTTTGA
AGGAGTGTTAGATTATATCTTCTATACTAAAGATGAGTTGACAATCCTAG
GTGAACTTGGTCCTGTTAACTTGGAATATCTGAAGAAAAATAAAGTCATT
GGGTTTCCACATCCTCATTTCCCGTCAGATCATATTTGTTTGGTTGTCGA
GTTTGATTTCAAATTGCCTTCCAGGTAGATTCACATTGTTGAAAGAACAT
CTTGTTGAGTTCAACCAGCTAGCAGCTGCGAATTGTGAAAATGCAGATGA
TATGTTAAACCGGGTGATGCAAAGAGATAACATTTGTATGATGGCTTTAT
TGGAGACAACAGAACCAGTAGCAGAGCTGAATAACAGCAAAGGGAAGCTA
GTTGTCACCAATGCCCACATCCATTGGGATCCAGAATTTAAGGATGTAAA
AGTTATTCAATCCGTCATGTTGATGAGAGAGCTCAAGAACTTCCTGGAAG
AATCTAACGGAGGAAATTGGAACAGAAGTATTTTGGAATTTCTTCCTGCC
AGAATTAAAAAAGAACGGCTATGAAGGGATCTTCAATCCCAAGTCTCGAG
CGAAAACCATGTCTGAAGAAGATCGTCGATATGTTGATGGATGTGCTATT
TTCTGGAACTCTGCTAAGAAGCTTCACGGTCATGTCATATAATGTCTTAT
GTGAGAAATACACTACAAGGCAATTGTATGGCTACTGCCCTCAGTGGGCA
TTGGCATGGGATTACAGAAAGAGTGCGATCTTAAAAGAAATCTTGCAATT
CAATGCTGATGTATTGAGTTTACAGTTTGTCCACGTCCACCAAACAGAGA
ATGGCTACCTGTTACGCAAAATACGACAAAGAACGATGGTAGCTGATGGA
ACTGCTTGCTCGAGATGTGATGGTCTCGTATCACTGAGACCTCAAAAAAT
AAAGGATTTATGCATAATATTGAACAAAATGAGCAAAGATACGAACGAGG
GAAATAACAATACAACCAATGGACATAAAGGAGAAGAATCTGATGAAAAA
CAAGTACAACCAACATCATGGACAGAACTTGAAATTGTCGGTAGCACACG
AAATCTAAGTCCAACTTTATGGACTTTCACGCACCTCACTGCCTTGTATC
TTCGTGACAATGGGATTTCTAGAATACCTCCAGAAGTTTCACGACTGAAG
GGCCTCACTAAGCTTGATTTATCAAAGAACAAGATCAGAAGTTTACCTAC
TGAAATTGGTGACATGATTGAACTCAATGATTTGAATTTATCATACAACG
CTCTGCGAGTATTACCAAATGAAATTGGACGTTTATTCAAGTTGAAAAGC
TTAGGGCTGCAAGGAAATCCTCTTCCCTCAGAAATAATGAATCTAGGTTT
AGATAATTTGTTGATGTATTTGCTTGGGAATTATACTGGAAAAGCGGGCT
TGAAAACACCATTTGTCATTTGCGCTGACATGAATTCCTTGGTGGACTCT
GGCGCCATCGAATATGTTGAAAAAGGGAAAATCCCAATCAATCATCCAGA
TTTCAAGACCATGAAATATGGGGGTTTCCTCTCAAAGCACACAGATAAGG
AGAAGAAAAATGGGGAGATGGTGACGCACCCTTTCAAGTTGAGTAGAGTT
GCAAAAGAGAATGAACTGCCATTCACTAATTATACATATGACTTTGAAGG
AGTGTTAGATTATATCTTCTATACTAAAGATGAGTTGACAATCCTAGGTG
AACTTGGTCCTGTTAACTTGGAATATCTGAAGAAAAATAAAGTCATTGGG
TTTCCACATCCTCATTTCCCGTCAGATCATATTTGTTTGGTTGTCGAGTT
TGATTTCAAATTGCCTTCCAGGTAGATTCACATTGTTGAAAGAACATCTT
GTTGAGTTCAACCAGCTAGCAGCTGCGAATTGTGAAAATGCAGATGATAT
GTTAAACCGGGTGATGCAAAGAGATAACATTTGTATGATGGCTTTATTGG
AGACAACAGAACCAGTAGCAGAGCTGAATAACAGCAAAGGGAAGCTAGTT
GTCACCAATGCCCACATCCATTGGGATCCAGAATTTAAGGATGTAAAAGT
TATTCAATCCGTCATGTTGATGAGAGAGCTCAAGAACTTCCTGGAAGAAT
CTAACGGAGGAAATTGGAACAGAAGTATTTTGGAATTTCTTCCTGCCAGA
ATTAAAAAAGAACGGCTATGAAGGGATCTTCAATCCCAAGTCTCGAGCGA
AAACCATGTCTGAAGAAGATCGTCGATATGTTGATGGATGTGCTATTTTC
TGGAACTCTGCTAAGAAGCTTCACGGTCATGTCATATAATGTCTTATGTG
AGAAATACACTACAAGGCAATTGTATGGCTACTGCCCTCAGTGGGCATTG
GCATGGGATTACAGAAAGAGTGCGATCTTAAAAGAAATCTTGCAATTCAA
TGCTGATGTATTGAGTTTACAGTTTGTCCACGTCCACCAAACAGAGAATG
GCTACCTGTTACGCAAAATACGACAAAGAACGATGGTAGCTGATGGAACT
GCTTGCTCGAGATGTGATGGTCTCGTATCACTGAGACCTCAAAAAATAAA
GGATTTATGCATAATATTGAACAAAATGAGCAAAGATACGAACGAGGGAA
ATAACAATACAACCAATGGACATAAAGGAGAAGAATCTGATGAAAAACAA
GTACAACCAACATCATGGACAGAACTTGAAATTGTCGGTAGCACACGAAA
TCTAAGTCCAACTTTATGGACTTTCACGCACCTCACTGCCTTGTATCTTC
GTGACAATGGGATTTCTAGAATACCTCCAGAAGTTTCACGACTGAAGGGC
CTCACTAAGCTTGATTTATCAAAGAACAAGATCAGAAGTTTACCTACTGA
AATTGGTGACATGATTGAACTCAATGATTTGAATTTATCATACAACGCTC
TGCGAGTATTACCAAATGAAATTGGACGTTTATTCAAGTTGAAAAGCTTA
GGGCTGCAAGGAAATCCTCTTCCCTCAGAAATAATGAATCTAGGTTTAGA
TAATTTGTTGATGTATTTGCTTGGGAATTATACTGGAAAAGCGGGCTTGA
AAACACCATTTGTCATTTGCGCTGACATGAATTCCTTGGTGGACTCTGGC
GCCATCGAATATGTTGAAAAAGGGAAAATCCCAATCAATCATCCAGATTT
CAAGACCATGAAATATGGGGGTTTCCTCTCAAAGCACACAGATAAGGAGA
AGAAAAATGGGGAGATGGTGACGCACCCTTTCAAGTTGAGTAGAGTTGCA
AAAGAGAATGAACTGCCATTCACTAATTATACATATGACTTTGAAGGAGT
GTTAGATTATATCTTCTATACTAAAGATGAGTTGACAATCCTAGGTGAAC
TTGGTCCTGTTAACTTGGAATATCTGAAGAAAAATAAAGTCATTGGGTTT
CCACATCCTCATTTCCCGTCAGATCATATTTGTTTGGTTGTCGAGTTTGA
TTTCAAATTGCCTTCCAGGTAGATTCACATTGTTGAAAGAACATCTTGTT
GAGTTCAACCAGCTAGCAGCTGCGAATTGTGAAAATGCAGATGATATGTT
AAACCGGGTGATGCAAAGAGATAACATTTGTATGATGGCTTTATTGGAGA
CAACAGAACCAGTAGCAGAGCTGAATAACAGCAAAGGGAAGCTAGTTGTC
ACCAATGCCCACATCCATTGGGATCCAGAATTTAAGGATGTAAAAGTTAT
TCAATCCGTCATGTTGATGAGAGAGCTCAAGAACTTCCTGGAAGAATCTA
ACGGAGGAAATTGGAACAGAAGTATTTTGGAATTTCTTCCTGCCAGAATT
AAAAAAGAACGGCTATGAAGGGATCTTCAATCCCAAGTCTCGAGCGAAAA
CCATGTCTGAAGAAGATCGTCGATATGTTGATGGATGTGCTATTTTCTGG
AACTCTGCTAAGAAGCTTCACGGTCATGTCATATAATGTCTTATGTGAGA
AATACACTACAAGGCAATTGTATGGCTACTGCCCTCAGTGGGCATTGGCA
TGGGATTACAGAAAGAGTGCGATCTTAAAAGAAATCTTGCAATTCAATGC
TGATGTATTGAGTTTACAGTTTGTCCACGTCCACCAAACAGAGAATGGCT
ACCTGTTACGCAAAATACGACAAAGAACGATGGTAGCTGATGGAACTGCT
TGCTCGAGATGTGATGGTCTCGTATCACTGAGACCTCAAAAAATAAAGGA
TTTATGCATAATATTGAACAAAATGAGCAAAGATACGAACGAGGGAAATA
ACAATACAACCAATGGACATAAAGGAGAAGAATCTGATGAAAAACAAGTA
CAACCAACATCATGGACAGAACTTGAAATTGTCGGTAGCACACGAAATCT
AAGTCCAACTTTATGGACTTTCACGCACCTCACTGCCTTGTATCTTCGTG
ACAATGGGATTTCTAGAATACCTCCAGAAGTTTCACGACTGAAGGGCCTC
ACTAAGCTTGATTTATCAAAGAACAAGATCAGAAGTTTACCTACTGAAAT
TGGTGACATGATTGAACTCAATGATTTGAATTTATCATACAACGCTCTGC
GAGTATTACCAAATGAAATTGGACGTTTATTCAAGTTGAAAAGCTTAGGG
CTGCAAGGAAATCCTCTTCCCTCAGAAATAATGAATCTAGGTTTAGATAA
TTTGTTGATGTATTTGCTTGGGAATTATACTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033862XLOC_033862Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053692-proteinTCONS_00053692-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053692-exon-scaffold_233-1575043694:1035746..1036348TCONS_00053692-exon-scaffold_233-1575043694:1035746..1036348Clytia hemisphaericaexon
TCONS_00053692-exon-scaffold_233-1575043694:1030613..1030672TCONS_00053692-exon-scaffold_233-1575043694:1030613..1030672Clytia hemisphaericaexon
TCONS_00053692-exon-scaffold_233-1575043694:1030204..1030361TCONS_00053692-exon-scaffold_233-1575043694:1030204..1030361Clytia hemisphaericaexon
TCONS_00053692-exon-scaffold_233-1575043694:1029266..1029420TCONS_00053692-exon-scaffold_233-1575043694:1029266..1029420Clytia hemisphaericaexon
TCONS_00053692-exon-scaffold_233-1575043694:1028748..1029031TCONS_00053692-exon-scaffold_233-1575043694:1028748..1029031Clytia hemisphaericaexon
TCONS_00053692-exon-scaffold_233-1575043694:1025926..1028483TCONS_00053692-exon-scaffold_233-1575043694:1025926..1028483Clytia hemisphaericaexon
TCONS_00053692-exon-scaffold_233-1510915933:1035746..1036348TCONS_00053692-exon-scaffold_233-1510915933:1035746..1036348Clytia hemisphaericaexon
TCONS_00053692-exon-scaffold_233-1510915933:1030613..1030672TCONS_00053692-exon-scaffold_233-1510915933:1030613..1030672Clytia hemisphaericaexon
TCONS_00053692-exon-scaffold_233-1510915933:1030204..1030361TCONS_00053692-exon-scaffold_233-1510915933:1030204..1030361Clytia hemisphaericaexon
TCONS_00053692-exon-scaffold_233-1510915933:1029266..1029420TCONS_00053692-exon-scaffold_233-1510915933:1029266..1029420Clytia hemisphaericaexon
TCONS_00053692-exon-scaffold_233-1510915933:1028748..1029031TCONS_00053692-exon-scaffold_233-1510915933:1028748..1029031Clytia hemisphaericaexon
TCONS_00053692-exon-scaffold_233-1510915933:1025926..1028483TCONS_00053692-exon-scaffold_233-1510915933:1025926..1028483Clytia hemisphaericaexon
TCONS_00053692-exon-scaffold_233-1491911889:1035746..1036348TCONS_00053692-exon-scaffold_233-1491911889:1035746..1036348Clytia hemisphaericaexon
TCONS_00053692-exon-scaffold_233-1491911889:1030613..1030672TCONS_00053692-exon-scaffold_233-1491911889:1030613..1030672Clytia hemisphaericaexon
TCONS_00053692-exon-scaffold_233-1491911889:1030204..1030361TCONS_00053692-exon-scaffold_233-1491911889:1030204..1030361Clytia hemisphaericaexon
TCONS_00053692-exon-scaffold_233-1491911889:1029266..1029420TCONS_00053692-exon-scaffold_233-1491911889:1029266..1029420Clytia hemisphaericaexon
TCONS_00053692-exon-scaffold_233-1491911889:1028748..1029031TCONS_00053692-exon-scaffold_233-1491911889:1028748..1029031Clytia hemisphaericaexon
TCONS_00053692-exon-scaffold_233-1491911889:1025926..1028483TCONS_00053692-exon-scaffold_233-1491911889:1025926..1028483Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_233supercontigscaffold_233:1025926..1036348 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.89302	7.06499	13.5903	15.9783	60.0185	46.4911	47.711	48.9448	31.3621	29.6077	21.0927	20.6539	17.4768	18.0555	17.0206	18.967	27.0041	23.0684	11.6514	13.1237	21.0899	21.387	25.011	25.946	23.7784	26.5917	12.8765	9.49446	20.2914	21.0435
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR005135Endo/exonuclease/phosphatase
IPR032675L_dom-like
IPR001611Leu-rich_rpt
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Blast
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BLAST of TCONS_00053692 vs. Swiss-Prot (Human)
Match: CNOT6 (CCR4-NOT transcription complex subunit 6 OS=Homo sapiens GN=CNOT6 PE=1 SV=2)

HSP 1 Score: 498.049 bits (1281), Expect = 2.021e-161
Identity = 249/517 (48.16%), Postives = 347/517 (67.12%), Query Frame = 3 
Query:  228 TSWTELEIVGSTRNLSPTLWTFTHLTALYLRDNGISRIPPEVSRLKGLTKLDLSKNKIRSLPTEIGDMIELNDLNLSYNALRVLPNEIGRLFKLKSLGLQGNPLPSEIXXXXXX-----------XXXXXXXXXXTVCPRPPNREWLPVTQ--NTTKNGSFTVMSYNVLCEKYTTRQLYGYCPQWALAWDYRKSAILKEILQFNADVLSLQEIGTEVFWNFFLPELKKNGYEGIFNPKSRAKTMSEEDRRYVDGCAIFWNSAKFTLLKEHLVEFNQLAAANCENADDMLNRVMQRDNICMMALLETTEPVAELNNSKGKL-------VVTNAHIHWDPEFKDVKVIQSVMLMRELKNFLEESNG-------GKAGLKTPFVICADMNSLVDSGAIEYVEKGKIPINHPDFKTMKYGGFL---SKHTDKEKKNGEMVTHPFKLSRVAKENELPFTNYTYDFEGVLDYIFYTKDELTILGELGPVNLEYLKKNKVIGFPHPHFPSDHICLVVEFDFKLP 1688
            + W ELEI G  R+LS +LW+ THLTAL+L DN +SRIP ++++L  L  LDLS NKIRSLP E+G+M+ L +L+L+ N LRVLP E+G+LF+L++LGL+GNPL  +I+NL  +              +          +PP R W+ + +   T     F+VM YNVLC+KY TRQLYGYCP WAL WDYRK AI++EIL  NAD++SLQE+ TE +++FFL ELK+ GY G F+PKSRA+TMSE++R++VDGCAIF+ + KFTL+++H VEFNQLA AN E ++ MLNRVM +DNI +  LLE  +   E+ + K  L       +V NAH+HWDPE+ DVK++Q++M + E+KN +++++        G+ G   P V+CAD+NSL DSG +EY+  G +  NH DFK ++Y   L   S H      NG  +TH FKL    +   +P+TNYT+DF+G++DYIFY+K +L  LG LGP++  +L +N + G PHP  PSDH  L  + +  LP
Sbjct:   29 SHWAELEISGKVRSLSASLWSLTHLTALHLSDNSLSRIPSDIAKLHNLVYLDLSSNKIRSLPAELGNMVSLRELHLNNNLLRVLPFELGKLFQLQTLGLKGNPLTQDILNLYQEPDGTRRLLNYLLDNLSGTAKRITTEQPPPRSWIMLQEPDRTRPTALFSVMCYNVLCDKYATRQLYGYCPSWALNWDYRKKAIIQEILSCNADIVSLQEVETEQYYSFFLVELKERGYNGFFSPKSRARTMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQLAMANSEGSEAMLNRVMTKDNIGVAVLLELRKESIEMPSGKPHLGTEKQLILVANAHMHWDPEYSDVKLVQTMMFLSEVKNIIDKASRNLKSSVLGEFG-TIPLVLCADLNSLPDSGVVEYLSTGGVETNHKDFKELRYNESLTNFSCHGKNGTTNGR-ITHGFKLQSAYESGLMPYTNYTFDFKGIIDYIFYSKPQLNTLGILGPLDHHWLVENNISGCPHPLIPSDHFSLFAQLELLLP 543
The following BLAST results are available for this feature:
BLAST of TCONS_00053692 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
CNOT62.021e-16148.16CCR4-NOT transcription complex subunit 6 OS=Homo s... [more]
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