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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00053774 ID=TCONS_00053774|Name=TCONS_00053774|organism=Clytia hemisphaerica|type=transcript|length=872bp
TAGAACTTGGTATTATGTTTTGTCGCTCGATGAAATAAGCGCTTGTCTTT
CTCCGGCGAAATCCACTATTGAAAACTTGGTATTATGTTTTGTCTCCCAA
TGAAATGAGCGTTGTTCTTTCTCTTGCAAAATCCACAATTTAGAAATTGG
TATTATGTTTTGTCGCCCTTTGAAATAAGCGTTGGTCTTTCTCTGGCGAA
ATCCACAACTGAGAACTTGTTATTATGTTTTGTCTCCCAATGAAATCAGC
GTTGGTCTTTCTTTGGCAAAATCCACAATTGAGAACTCGATATTATGTTT
TGTCTCCTAATGAAATCAGCGTTGGTCTTTCTTTGGCAAAATCCACAATT
GAGAACTCGATATTATGTTTTGTCTCCCAATGAAATAACCGTTGGTCTTT
CTCTGGCAAATCCACAAGACAGAACTTAACATTATGTTTTTTCTCCCAAT
GAAATAAACGCTTGTCTTTCTCTGGCGAAATCCACAATTGAGAACTTGGT
ATTATGTTTTGTCTCCCCATGACATAAGCGCTGGTTTTTCTCTGGCAAAT
CCACTATTGAAAGTTTGCTCGGCTTTCAGAAGTTTACTGCATATTATAaa
atatgaacaaaattttcatttgatatAACTTAGACATATATCTGCCGGGG
GTCATACCTAGCTTCTCCAAAATCAAGGATAGCTTTTGCAACCAATTTTA
AAATTGGAAATGGCATCATACGTGCCGAACGGTATTGTTGCAAAGAGACG
TACTTTGCTTTCGGAATGCGCTCCCAGATCAAAGCGTGAAACGCTTCATT
TTGATTCCGAGTCGAAATCTTTCCAAGAGTTTTGAAGCACATGTGTCAAT
AAAATGTCCATTGGTAGTCCTT Run BLAST on NCBI transcript from alignment at scaffold_233:1167495..1168366 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00053774 ID=TCONS_00053774|Name=TCONS_00053774|organism=Clytia hemisphaerica|type=transcript|length=872bp|location=Sequence derived from alignment at scaffold_233:1167495..1168366 (Clytia hemisphaerica)
AAGGACTACCAATGGACATTTTATTGACACATGTGCTTCAAAACTCTTGG
AAAGATTTCGACTCGGAATCAAAATGAAGCGTTTCACGCTTTGATCTGGG
AGCGCATTCCGAAAGCAAAGTACGTCTCTTTGCAACAATACCGTTCGGCA
CGTATGATGCCATTTCCAATTTTAAAATTGGTTGCAAAAGCTATCCTTGA
TTTTGGAGAAGCTAGGTATGACCCCCGGCAGATATATGTCTAAGTTatat
caaatgaaaattttgttcatatttTATAATATGCAGTAAACTTCTGAAAG
CCGAGCAAACTTTCAATAGTGGATTTGCCAGAGAAAAACCAGCGCTTATG
TCATGGGGAGACAAAACATAATACCAAGTTCTCAATTGTGGATTTCGCCA
GAGAAAGACAAGCGTTTATTTCATTGGGAGAAAAAACATAATGTTAAGTT
CTGTCTTGTGGATTTGCCAGAGAAAGACCAACGGTTATTTCATTGGGAGA
CAAAACATAATATCGAGTTCTCAATTGTGGATTTTGCCAAAGAAAGACCA
ACGCTGATTTCATTAGGAGACAAAACATAATATCGAGTTCTCAATTGTGG
ATTTTGCCAAAGAAAGACCAACGCTGATTTCATTGGGAGACAAAACATAA
TAACAAGTTCTCAGTTGTGGATTTCGCCAGAGAAAGACCAACGCTTATTT
CAAAGGGCGACAAAACATAATACCAATTTCTAAATTGTGGATTTTGCAAG
AGAAAGAACAACGCTCATTTCATTGGGAGACAAAACATAATACCAAGTTT
TCAATAGTGGATTTCGCCGGAGAAAGACAAGCGCTTATTTCATCGAGCGA
CAAAACATAATACCAAGTTCTA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00053774-exon-scaffold_233-1491911889:1167495..1168366 | TCONS_00053774-exon-scaffold_233-1491911889:1167495..1168366 | Clytia hemisphaerica | exon |
| TCONS_00053774-exon-scaffold_233-1510915933:1167495..1168366 | TCONS_00053774-exon-scaffold_233-1510915933:1167495..1168366 | Clytia hemisphaerica | exon |
| TCONS_00053774-exon-scaffold_233-1575043694:1167495..1168366 | TCONS_00053774-exon-scaffold_233-1575043694:1167495..1168366 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_233 | supercontig | scaffold_233:1167495..1168366 . |
Blast
The following BLAST results are available for this feature:
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