TCONS_00053790 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00053790
Unique Name	TCONS_00053790
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	4401

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at scaffold_234:102359..115311+
coding sequence from alignment at scaffold_234:102359..115311+

transcript sequence

>TCONS_00053790 ID=TCONS_00053790|Name=TCONS_00053790|organism=Clytia hemisphaerica|type=transcript|length=4401bp
GATAAAATGGCTGAGCCAATATAAATTGAACTCTCTTCTCAGAATGTCTT
ACAAAGGagatttaaagaaattatttagAGAAGAAAGAAGTTATGAAATT
GATTCTACTTGTTTTTGGCTTAATCCAAGCCCATGCATCAGTCCTTGATG
TTTTTGCTTTCACCAATGGACATGAGCCACGAGTTGCCATGAACTGTGAT
CATGTACCATTCTACATTGACTTGAAAACCGGATCATGGGTTGAAGACAG
CGAAGGACTTGAAATTTGTGATCACAACAAAGAAGTTGTCAAGAAATACT
GTCAAAAGATGTACCCCAAACTGAACATCACCAACATTGTTGAAGCCAAT
ACACCACAAACCTTTAACAACTGGTGCCGATCCGGACAATCCCAATGTAC
TGAAGCCAAAGAAGTTGTTCCATACAGATGTTTGGTCAATGAATACGAAG
CTGATGCTCTTATGGTTCCAGATGGTTGTAAATTTGATCACATCCATGAC
CCAAACCAGTGTTTGAGCCATGACCaatggaaagaaaaagcctCCAAAAA
ATGTGACAGCCAatacaaaatgaaattgaaggaCTACGGAATCTTGCTCT
CATGCGGTACTGATGTCTTCACCGGTGTTGAATTTGTCTGCTGCCCAGAG
AAAATGCCAGAAACCAAACCAGCCCCAAGTGCTGCTACCCCAAAAATCAC
CAAGGATGTCTTCCAAGCTGCTGTTGCCAAATTCTTGCAATACTTACCAA
GTGTCACCAAGGGATGTGACAGAAGCACCTATTTGACCAAACAAGCCTCC
ATGGGAGAACACCACCAAAGCCAAATCGCTGCTGTTGTCGATGAATGGGA
CAATGCTGAGAAGAGATACAACGACTTGAAGAAAAAAGACCCTGTTGTTg
ctgaagaaaaaatgaaacGAACCTTGGAAGTTTTCCGACAAACTCTTGCT
GCCCTTGAACAAGAGTCCAAGGACGAGAAAGAACGATTGAGAGTCGAACA
TGCTGACTGTATCAACACCCAAATCTCCAAGGACAAGAGAGATGCCATGA
TCAACTATTTGGCCTCCATCCAAAAGGAACCTGCCAATGCTGACGAAATC
TTGGGAGCTGTCCGCAAATTCATCCAAGTCTGCGAACACGACAGAGTCCA
CAGCCTCCGACACTTTGAACATGTTCGCCGACGAAATGCAAGCGAAGCCG
ATTCCATCCGATCTGAATTATTGCAACACTTAAAGGGATTGAACAAAGTT
GTCAATGAAAGCATGGCCCTCTTGAACTACTTGCCAACTATTGCCAAGAA
ATTCGGACTCACTGGAAACACTGCTGTTTTGAAACCAAAAACTGAATTAC
CAGAAATCAAGCACGAAGACCATGTCCATGAACGTGTCAAAGAAATCCTT
GAAAACAACAAACACCTTGAGGAAGATGATGATGAAGAcgacgatgatga
tgatgaagaatCTATTTTCGTCACATCCAAACCCGTCCCATTGAAGAAAT
TATTGGCCGctgccaaaatcaaaaatacCGTCGAGAAAACACCCACTATC
AAATCTTTGGGTAAAATGGCTGCCAAGATTAAAAACGAATATGATGACTC
CGATGATGAGGATGATGATAATGACATCATTGCCGATGCTTTCCCAGTCC
CACAAAAAGACGCACCCACCCACCACAAAGGAAAGAAGGAACATCACCGA
TCACCGATGGTTATTAACATCATCTTGGGATTGTGTTGTGGTATCTTGGT
CGTCATGTTGATTGTCGTTATCGTCATGGTCGTCCAACGCCGACGTGTCG
CCCACACTCGAGTCGTCATTGCCGAAAATAATGATGACCGTGAGCATTTG
ATTCAAATgcaaaaaagtggatttgaaaatccAACCTACAAATTCTTTTA
TTattaaatttttccttttttaataataattgGATTTCGAATGATGTATG
TGATTTAAGAACAAACACGACAtgagaaagaaattttatttgttacttat
tttggttattttggtaaaaaaaatctACATATGTAACCAACCTTGGAAAG
ATTTAGTGAGAGAAAATGTAGatagattgaaaaaaaagcaCATTTTCTGT
AAGAAAATTGGTGTTGTCATCACACAAAGTATCGTTGTTGCCACTACTat
tattttttgtagaaaaaaatttttgtaacaATGAGATCGAATTATAGATG
AGTTGTAGGTCGACTTGGCTCACTCGATTTTTCGATTACTTTTAAAGTTT
CTGAAATTCCCAGTTCGCAAACAGGATTTTGTATCTTTTATCCCTCTTTT
GTTGtacagaaaattgaaaattccccTTGGAATTCTTTCTCAATACAATT
CACTTTAAGAAGGTCTCttgtttttaccattttactttattaaaagaaaa
atatacctTCGTTGTTCTAagtgtaaattttttgattttttatatgatgt
aaattttaagtattttttttgtGCCCTTTATTATGCCATGCTACCGTTCC
ACATAACTACGATCTGACGACATTGACATTTTGACCAAGACTTAAATAGA
ATTGACTTTCTGACGAAAACATGACTTCGCGATTTAGTACCTGACTTACA
AGACAAGACTAATTAAGACTGTTACTTCAATGAAACACAGACCTGTGAGG
ACTGTTTTTTTAACTACAATACTTTTGAGACAGGACAGACAAAAAAACTT
CCTTCGACTTCTATCGTTaccacaaagaaaaaaagatttgaggGGAGGTA
TCAGGAGGCATCTCAAACAACTAAAAAGGAGGTCTAGATAAAGAAAtagg
aatttcattttcatttgatgCATCAATATCTATCCATCAAACGACGACAA
GATAATAACAAAACATCAACAttctttttatagtttttttatatagagag
aaaatgtttttgtcaAGTTAATTAAAAAGCTTTTCTTTTAAGACGCATTT
CCTGACCCCATGTTTCGAAATAACCTCTTTGTAAAGACGAAATACCGACC
GACATACACGATAACAAAAGAACTACtctcttttttattagaactctatt
ttacaagaaaaatctggcTCTAAATCACCACAAAATTGGAAGACAAAAGC
TTTTTGTTGACTTTCATAAAGTATAAATTTGAAGTCTCCCAACctcaatt
ttggtgaaaaagaaatatgaCCAATCTCCTGAAGCTTGATTCTTTTAGAG
AAAGACCTAACGACAGAACAAAAGACATTGACTGCacaaaacaatataat
attccACCCACACCTCCTGATTACTTTAAACTTTGTTCCTTCACTAATTA
TGTTACACATCATATTACCCATCATctcttgttttttattattaattatt
ttggtattttataaTAAATGTTTTAAAAGATGTCTTTTTTAAATTGGAGG
ATAGGTACTGTAATGTGAAATTGGTCTATAATAAGGTAACTATAGTAATC
AAACGCCTTTGAACTTAATTGGAAtgttggttctttcaaaataTAACCAG
CCTACACCTTCCTTCATTTTTGAAAAGCATTCTactgtcttttttttttt
aattcttatttattttgttaataACAGCTCCTTTTTGCTCTTCTAAGATA
TCCTGCCAGACATCCTGGAAATTCAGCATGATTTCTCGGTGATGTTCTCA
TAGTACAATACCTAAGATCTAAAATCTTCGTGATATTCGttgtaaaattc
aaatttacgtcactttttctacaaaatgtcaatttttatcaGCTTTTTTC
GAGCATTTGTAATGACGTTTTTAACTAGTGAAAAAGTGTCGTCTGTTATA
TTCAGGCGAATATCACGTGTTCTAGTCTTTTACAGGAATCTTAACAAACA
ACTGACCCtaataattttacattttaattttGCTTTGAATCTGATTAACG
ACTgtcatttcatttttaatatATATAATGATTCCTTTTGTTCAAGATTT
TTCGAAAGTTTGAAACACCTGGTAAACACACCTACCTACTATGATAATAA
GTTCGGTATCTCAATTTTGTCATATTTGGCACTCAACTGACATTAATCAT
TATGTCATAAATTGCGATTCATTATGACACATAATGACGTTTCAGTCTTG
ATTATGACGTAAGAGATACCCTACTAATTATCGCCAGTAGGAGTTTGTGT
TTGTCTATTCGACTAATTtaataattgataaaataaaaaggagctggatt
tttttcttaatccgatttttgtcaattttctttgtctttctGAATATCCC
TGTCTTTTCGTATACACCCAATGTGTTCATAtggatggagtttttacaag
attttattttcatttatttttctttagttctttTAACTCGTCCATCCTTT
GAAAGGCTAGCTTTCTCTCGTATGATAggagaattgttttttcaaaccgT
G

Run BLAST on NCBI

protein sequence of TCONS_00053790-protein

>TCONS_00053790-protein ID=TCONS_00053790-protein|Name=TCONS_00053790-protein|organism=Clytia hemisphaerica|type=polypeptide|length=604bp
MKLILLVFGLIQAHASVLDVFAFTNGHEPRVAMNCDHVPFYIDLKTGSWV
EDSEGLEICDHNKEVVKKYCQKMYPKLNITNIVEANTPQTFNNWCRSGQS
QCTEAKEVVPYRCLVNEYEADALMVPDGCKFDHIHDPNQCLSHDQWKEKA
SKKCDSQYKMKLKDYGILLSCGTDVFTGVEFVCCPEKMPETKPAPSAATP
KITKDVFQAAVAKFLQYLPSVTKGCDRSTYLTKQASMGEHHQSQIAAVVD
EWDNAEKRYNDLKKKDPVVAEEKMKRTLEVFRQTLAALEQESKDEKERLR
VEHADCINTQISKDKRDAMINYLASIQKEPANADEILGAVRKFIQVCEHD
RVHSLRHFEHVRRRNASEADSIRSELLQHLKGLNKVVNESMALLNYLPTI
AKKFGLTGNTAVLKPKTELPEIKHEDHVHERVKEILENNKHLEEDDDEDD
DDDDEESIFVTSKPVPLKKLLAAAKIKNTVEKTPTIKSLGKMAAKIKNEY
DDSDDEDDDNDIIADAFPVPQKDAPTHHKGKKEHHRSPMVINIILGLCCG
ILVVMLIVVIVMVVQRRRVAHTRVVIAENNDDREHLIQMQKSGFENPTYK
FFYY

Run BLAST on NCBI

transcript from alignment at scaffold_234:102359..115311+

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00053790 ID=TCONS_00053790|Name=TCONS_00053790|organism=Clytia hemisphaerica|type=transcript|length=12953bp|location=Sequence derived from alignment at scaffold_234:102359..115311+ (Clytia hemisphaerica)
GATAAAATGGCTGAGCCAATATAAATTGAACTCTCTTCTCAGAATGTCTT
ACAAAGGGTAATGTATAGACTTTTATCATTTTGAAACATTCTTTTCACAT
GTTTTAAAGGTTTGAGTATGTTATTTCGAATCTAGCTCGCTTCGCGGCCT
ATAATTCCTGCAATATTGGTCTGTTTTGAGCAACAActttttgtgtttgt
ttgtgTTTGTGTTTGTTGAAACTAACCAGCCAGTCAGAGTAAGGATATCT
TATAATAGTTGGTTTTAAGAATGATATCATTTGCTACTTAATGGATTTAG
ATGAAATGGTCCTTGAAGAGGCAGGACTTAGATGGCCGAGAAAAACTTTG
GGAGGGAAAAATTCTGACATTTTacatttgacatttttattttgactCTT
TTCAGTCCAGtcgaatgggccattccagaatttgtctgtaacaggggggc
gaacgacacaggatttccaagGACAAAagcttttcaccaaaattcaaaat
ttccaaggcgagagaagaaaatgtatgaatttccatggcaattgaattaa
aaaaggcaaaaaagagtggaatttccaacGTATTTTTCGAAAGTACAtgc
attttcatttgaaatatccgaccaccactggagaaaaaaaattatttccg
aggctagaaaaaattgcATGTCGTCCAACAGGGGGTAACAAGAATTTTCT
TAAATGGCCCAATCTAATTCCCAAAACAGTAACTCTTTTTATAGCTTTGA
ATTTGCCTTAGgtcattgggctattccatttttaaaccacaCAGGGGTAT
TGatgaacttttccaggggggtctgaaccttgattttccaaggggttttt
ggtcattttcagattttccaagggggttattatAGGTTTCCAGGGGTTTC
TCTCCTCCTGAACTGGCATCAATAGTCACTTTCTAGGcccttttttacaa
aattttacttTCCAGGGGTGTTGACtcctaatttccaggggatagtttgt
tatccaaaatttccaggggggttagtgaaaaaagttcgtcaataccccgg
tacaatttttttttggaatagcccattttgattgaatttaagagaaagaa
caataaaaaagaacaatacctttttcataaaacaaaaaattgtgacttca
aattcaatctttttcttcctctaaaccatctaaaaatcttgaaaggtatg
attttatttgtctttggtacagtttttcaaaaatttgtggTTTATAGGAG
AAAATCCTGTTTTAAATTTggctaccgtaagttggtctaatgtcaataTC
TCTCTTTAATTTTGACATCCTTCTTTGGAGATAGGAAGGTTTGAATCACT
GATGGACTCCTTGACTGATTGCTTAGCCACGCTTAGCGTTATTCCGACAC
TATAGGCTGGGTGGGTTAGATCGACTGACGCTAACAAAATTTACTAGAGA
TATCAATTTTCGAGGCCCGAGAGATGTtcaaatttctagaaaattatAAC
CGTCgtacttattattttttagcAGCCTCTCCATATTCAAGATTTAACAA
AACATCCTCACTTAAAATTTGTCTCTTTTTCACGGCATCAAGAATAACTT
Tataatcattttctcaagcaaagagtactcaaagcaattttagctttacg
atagtgccgggGATTTTCAGTGGATAGTatttaattatcattatcccttt
attttcatttcttgaactttagcaaaaaaaaaaggaaaaatagaaaagtt
gtatgtTTTACTGccctattcacatactgaattttaaagattttctatGG
AATTTTGCAAGATTCAAAAGACTAACTTTTGTCTCGCTTTAGtgggactt
tagcttaagtgcttgcgtccagcattgggtacaaagtccaaatatgtggT
TCCCATATATGAAGAGTTAGGGCTATACTGTTTTTGTTCGaacttgttcg
attgacacGGTCTGGTAATGTCAGCATGTATCGTCTAATTCTAACACTTC
TTTAGAGATGAATAGTGTAGAAAGGTTGGAATCTTGACGTGGTCAGaaag
gaaaaatcttttttcaatcttaAGTACTAGtctagaaaatcttttttcag
tcAATAATtccaacctttctatcaataaGAAGATTTTGGAATAAGATGAG
GGTTGACCTCATTAAATCAACTCACAGTAGACTTTTCTGGAAATTGACCA
tgtgaatttattttcaatctccCTTGGTCAATAAGTAAATTTGTTTGTGT
TAtaaaataatgttttaaaaGCTTAAACAATAGGTGGCGTGCTTTTGACA
CAGTGGATTGCAAAATTCATAGTTTGCCCCGTTATAAATTAGCCAATGTT
TAAATCATTTTAGAAAGGTGGTTTTATCTAAATGGAGGATTAAGATGTCA
GTGATGTGTTTTTGTGTTTCCCCTGGTTTTCCCAAATTAGAAGTTTGATT
TCTGATTTACCATGCAATGTCTTCTATCTTTATTGTTTAGTatgtttcaa
aacattcaatttgTAATGATTCTTCTGTTTTTCGTAGTGCAACAATGTAG
GGTAgtatcaaatttttataaaacagTGAAGAACCCTAGTGTAGGGGTAG
TTCTATTTACTTGATGACTATGGCGTCAgcaggggggggcacgcagttac
tacaagacatgatgtgtagtaagtgctttttcaacactttttttcaggac
caccaccctttgcagttNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNGTCAGAGGAATTATCAATGACTGGTTACAAATTTATCTCTCCAAGT
TGCTCTTAGTATCAGTAATCGAAACAGCAATCAGTTATCGGTTAAACCCA
ACCAGACAAAAAAATCACCAACcctaaaattttcagaatttgtgaAAATA
ACCGACcaatattgattgattgacttAAACTAATCTTGACGTTATTAATA
GACTAAATACTTTATTACTAGTTCCCTAGTAGTGATtttcttctctaatt
tcttTGTTACTTGAACTTTATTCCTCCTAGCTTTCTCCTCTGACTTCTTC
CTTTATCAAACTTATTAACTTTTTTACATTGTCAAGAATActcatttaca
aaatttttcaaaaactgtatggaGTTTTCTAACtgatttaatggatgaca
aaaatGTATTATGTTTAATTGCTAGTTATATTGGGAAATCTTTGGCTTGT
AACTGTATATACTTTGTCCTATTTGATCATTTTGGTGGTGCATAGAGCAA
GTTTTCTTTGAAATGGATTTTCAGTAAAAAAGGGGGATAAATAATTTGAC
TCCTAAATTGAttttaagtacctgaaaattgGACTGGTCTTGGTATGGTA
TCATGAGCGATCTAGTAGCGGTCAAATTTGTTTTAGATTGGCCTTCAGAC
CTTCtacgaaatttgattttaaaaggtCCTGGTCGCTCGTTagactacct
tattggaactaattttcgcggtcgaaaaaaaatatccaaaaaattgcatt
tcgcgggttctaattttcgcggttttttccattctggaattttcgcagtt
ttgcccatttttggacaaatttctctcattttcctagggatttttcaaat
ttttcgataaaattggaaaaaattgtatttcgcaggaattaatttttgcg
gttttcaactctcaaaattttttgtgggatcaaattttcgcgattttgac
gaagaaccgcgaaaaacgctaaaattaaaacccgtgaaaattagttccaa
taaggtagtccTGACCTCTAGTTAGTGTTTTTAGTAACAATTACATCAAA
CAAATTGTTATAAAAGGATGTCAACTGGTCAATTGAGGTTGGTCTTGATC
CAAATGCATCAAAATGACAGTTAAATTAACTGGACTCGTCTCTTTGTGGC
CTTTTGTCAAAGTTTTACCGGTCATTTACTAGCCTTGAAAAGACAGTCTG
AAGACCAGTccgattttcaggtacttaaaaTTGCTGAGCAAGGcacaaat
ttcatttaaaaagagGAAATGACAGAAACGAGGGGAATCATACCCCTCTT
TTATTAGCAGGTATTAGCCTAAAATTTATATtctttatattattattata
catTTTCCAGTCTAAATAGACAATTATGGatattattcattatttttgta
tgGCATCGTCATGTTTTGCAAAACCACTATTAATGACGAAATAACTGACA
CATAACAAACATTATTCAGACTCATGGTCTTGATCTAAACATAGAATGCA
GAGGGATCCAGCCcccagaaaaaaggaaaataggCCCAGCTAAATTTCAA
AACGTAGCCCCCACCTTCAAAAtagcaaagaaattttgcatccaaattct
caataaatgtattttaataTGATAAGATAGCCCccagaatctttaaaaaa
tggtttaccctccccccccccaaaaaaaaaaaaaaactcaggGGGGGGCA
TTCCATGGccagaatttaatttttaaaatggtTTTGCTCCTTCCTGCAGT
TCATGAAAATCTTCCATAAGGAAGCCACATCCTAGAAGGGCAGGGCAACG
TCGGGTAGCAGCCAAATAAGAGCACTTTTTGGagtattttttataaaact
tgtttttaccttaattttgtttaaaaaccaAATACTTAAAAGGCATGAAA
ATGGCCTGATACTCTTTGCAGTGGATTTTGCTTGACTGGTACGAAACTTT
AGTTCAGTCCTCAACTTGgtgaataattagaatttacgTTGTGTATTAGT
ATTGAAGCGGTCATTTCTCCTGTTTTTCTATTCAATATGTCTATGTTCGT
CTCAATTCACCTTCTTTTTTTTCGCTGatgttttcatcttcttttcaATT
ATTGTCATTCTGATACCAttgtcaatacttttctttaattttgttaATCC
CCAGATTTGTACAGTTATCAATTCAAGATcttcatgaaaaattattttta
ctacACAGAAACAGCTGGACCATTTTCTTACATTTATACATATTTATATA
CTAATCAAActgtttttcttccttttatctCTATGTGATTCTGAGGGTTA
TTATTTATTGGTTTAAGTTGTAAAGAACACTCTTATTAGGGGGTCAAAAT
ACTGATGGTACTTCAAAAGGTCATTATTAGGAAACTATTTGAAGGCATTT
GAAGCAAAATTCAGGCCACAGGATCCTTTAAAAGTCAATCTAGTGAGTTG
AACCCAAAAAATATCCACTGCCGGGTGTGAACAAATTTTTTCCCTAAATT
TCCTGAAATTTCTATCCCTAATCTTTTAAAGCATTCGTCAAGGTTAAAAG
GATGGTCttttttgggacaagctggagtttttacaagctcttatttgatt
tggttggtcgttaagatgtaataaaagaatcttattactttttctaaaga
acgcgtcatctctatcactttaaatgaccaattagtgaagtatcttgtaa
aaactctagCTCATCATCCCTCTCTTTTGCCTTAAAACTGCAGTAATTTG
ACACCACTATTAGAAATGTAGGTTTTGTGTTTGAATTTTCAGCTAAATAA
GAATGTGCGCCTAATTTTTTCTCCTGTTATTCTAATGCTCCCTGCTTTTA
CATGGGGTCAAGTTTAGTTGAACTTTGACAATGGCCATGTCATAGTTAac
tatgtttatgtttctttatAATTGCAATACTTAGAAATTGTCAAGTTACT
TATTTGAGACAGTGTAAACATTTgcattttttctatttcattgaTGGTGG
GGAATTTATTCTTTCTGTATTCCTAGTGGTTAAGCAGTGAGACTTTGAGA
AAGAGACAACATTTTAACAAAGACGTTTTTTTAACAATATTCTTAATATG
TTGAATCTAATGAATGAGATTTGTTATGATCTTTTCAATTTGGATTTTGT
GTATCTATTTAGTGAGTGTGGGTTTTTTGCAGAAGAAAAACCCCTGCTGT
TTCATTCCTCTTTCTATTTAACTAACATtccatgaaaaattgatgaagac
tTTTCAAAGTTTCTTCACAATCTTCCCTTGACTCACAATCAACTTgatga
aaataggaaaaaatgaAATAGGAAAGAAAACGTTTTCTCAGCATGTTTTA
TAATGGGggaaaagtaaaaagtaaagtCTTTCTGGGTTTTACAAGAttgc
tttttcatttttgtatacAGTAAATTTTATGTCAACAGTGAATTACACTT
CTTgattatcatgaaaattttcttgatagttttttatcaattattcaTCT
ATTTCATCATTGTAAatgtgagagaaaaaaattgataaaaacttaTTCAA
TGTCTCTCTATAATATCTTTTGCTCAAGAAAGTAAACTACTAAAAAGTAT
GATGAAAAGACCATTGTGTCTTTTTACAAATTTAATTAATACTACATGAA
AGCAAGCTGGTTTTTACCAATCTTTATGCATTGAGATAAATTGCACCACT
CTCATGAGAGTATTGACTTATTTAGTAATGATGTCACAAGTTATGTGATT
AGCTTCTTACATGGAAACCAGGCTGCTTTCCTGATGACCAGTTGATTGTT
ATTATATTGCTGCTAATGGTGAaatgagaagaaaaattacagaaaatcaT
AGGAGCGGAAAATTTGAAGGGAATTTTATAATACCTCTATTATGACGACA
CTTATTGACGCATTAAAAAGCTATTCAGTCATTTTTTGATGCATtcattt
tgtttctttctaatGGACATACCCTGCTTTCGACTTGTATAAAAAGTTTT
GtgttgagaaaattattttcagtgacaAAAAAATTCGCATAGCATAcact
gtatatatttttaagaaaactaatttattaatacaaatttttatagagat
ttaaagaaattatttagAGAAGAAAGAAGTTATGAAATTGATTCTACTTG
TTTTTGGCTTAATCCAAGCCCATGCATCAGTCCTTGATGTTTTTGCTTTC
ACCAATGGACATGAGCCACGAGTTGCCATGAACTGTGATCATGTACCATT
CTACATTGACTTGAAAACCGGATCATGGGTTGAAGACAGCGAAGGACTTG
AAATTTGTGATCACAACAAAGAAGTTGTCAAGAAGTaagttttttcattt
cttatttaagaaaattttgacatttttcaatgtTTCTTACCTTGGCCTGA
ATTAATATGGTTATCcctttttttgtgatttcaatAACATTCGACAGACT
GATATGGTTGATttcttttaaatgattttttttgactgtgcCCCAGAATC
AGTAAGTCTTGTATTGCTCAAAATACTCATAATTTTTGTCCATCCTTGAT
CTTCAGATACTGTCAAAAGATGTACCCCAAACTGAACATCACCAACATTG
TTGAAGCCAATACACCACAAACCTTTAACAACTGGTGCCGATCCGGACAA
TCCCAATGTACTGAAGCCAAAGAAGTTGTTCCATACAGATGTTTGGTCAA
TGAATACGAAGCTGATGCTCTTATGGTTCCAGATGGTTGTAAATTTGATC
ACATCCATGACCCAAACCAGTGTTTGAGCCATGACCaatggaaagaaaaa
gcctCCAAAAAATGTGACAGCCAatacaaaatgaaattgaaggaCTACGG
AATCTTGCTCTCATGCGGTACTGATGTCTTCACCGGTGTTGAATTTGTCT
GCTGCCCAGAGAAAATGCCAGAAACCAAACCAGCCCCAAGTGCTGCTACC
CCAAAAATCACCAAGGATGTCTTCCAAGCTGCTGTTGCCAAATTCTTGCA
ATACTTACCAAGTGTCACCAAGGGATGTGACAGAAGCACCTATTTGACCA
AACAAGCCTCCATGGGAGAACACCACCAAAGCCAAATCGCTGCTGTTGTC
GATGAATGGGACAATGCTGAGAAGAGATACAACGACTTGAAGAAAAAAGA
CCCTGTTGTTgctgaagaaaaaatgaaacgtAAGGAGAGTTATGATTTGT
GAGAATTTGCTTCATGCACTGTGTTTAGATTACTTTATTTACTGTGTCCA
CTAGCAAGGATGAAACCTACAACATTTTAATGAGTTTTCTTTGTATTCTT
TTCAGGAACCTTGGAAGTTTTCCGACAAACTCTTGCTGCCCTTGAACAAG
AGTCCAAGGACGAGAAAGAACGATTGAGAGTCGAACATGCTGACTGTATC
AACACCCAAATCTCCAAGGACAAGAGAGATGCCATGATCAACTATTTGGC
CTCCATCCAAAAGGAACCTGCCAATGCTGACGAAATCTTGGGAGCTGTCC
GCAAATTCATCCAAGTCTGCGAACACGACAGAGTCCACAGCCTCCGACAC
TTTGAACATGTTCGCCGACGAAATGCAAGCGAAGCCGATTCCATCCGATC
TGAATTATTGCAACACTTAAAGGGATTGAACAAAGTTGTCAATGAAAGCA
TGGCCCTCTTGAACTACTTGCCAACTATTGCCAAGAAATTCGGACTCACT
GGAAACACTGCTGTTTTGAAACCAAAAGTGAGTGTTGTTTTTTCTTGGGA
AATTTTTGTAGGAATTGAGGATGATGAAAAGATTTCTGAGTGTATTAAGA
GAAAGGAGAACGTCCCTACTTTGTATTTTAAAGTTTGTgttttttagaaa
actttttaacacctttttgttcgtttttgaagaattttagtGTGAATTCA
TGTGTTATTTTAATGTTGTTTATATCTCTACAGACTGAATTACCAGAAAT
CAAGCACGAAGACCATGTCCATGAACGTGTCAAAGAAATCCTTGAAAACA
ACAAACACCTTGAGGTACATTTTCTAATCGTGATAAGCTTTTTTATCACC
TTTTTCTGGCATTTAGATACACCtcagaaattttaaaacttttcgtTAAA
TGGTATAAGGAGAAAAAATTAGCTTTCCAAGCTTTTTCTGATTCgagaat
ttttaatttcttactAAAATTATCTGCTTGGATTCCTTGAATTTTTAATC
CATGACTTAAAAATTAATCGATTTTTTGACGAGAGGTTATAACCCCTAAT
TTATACTCTGTTCACTCCTCAAAACGTCACGACAAGGTCAAGTTTTGTAA
GAATTTATGcaatttagaattttcaaaattcatgatGGAGATTTCTCTTA
ATCCTAGACTTTTCCTTCCGTAAAAAGCTTCTTGATGAATTCAATTCTTA
GAACCAATGAAGAGCTAGTATTTCGATTTTCTATCCTTTTCACTTTGTTC
TTGGTTGCACACACTAAACTGTGTAATTCTTAAAGTCTAAAATTTAATCA
TGGTTCGTGTGTCCATTTTTTAGGAAGATGATGATGAAGAcgacgatgat
gatgatgaagaatCTATTTTCGTCACATCCAAACCCGTCCCATTGAAGAA
ATTATTGGCCGctgccaaaatcaaaaatacCGTCGAGAAAACACCCACTA
TCAAATCTTTGGGTAAAATGGCTGCCAAGATTAAAAACGAATATGATGAC
TCCGATGATGAGGATGATGATAATGACATCATTGCCGATGCTTTCCCAGT
CCCACAAAAAGACGCACCCACCCACCACAAAGGAAAGAAGGAACATCACC
GATCACCGATGGTTATTAACATCATCTTGGGATTGTGTTGTGGTATCTTG
GTCGTCATGTTGATTGTCGTTATCGTCATGGTCGTCCAACGCCGACGTGT
CGCCCACACTCGAGTCGTCATTGCCGAAAATAATGATGACCGTGAGCATT
TGATTCAAATgcaaaaaagtggatttgaaaatccAACCTACAAATTCTTT
TATTattaaatttttccttttttaataataattgGATTTCGAATGATGTA
TGTGATTTAAGAACAAACACGACAtgagaaagaaattttatttgttactt
attttggttattttggtaaaaaaaatctACATATGTAACCAACCTTGGAA
AGATTTAGTGAGAGAAAATGTAGatagattgaaaaaaaagcaCATTTTCT
GTAAGAAAATTGGTGTTGTCATCACACAAAGTATCGTTGTTGCCACTACT
attattttttgtagaaaaaaatttttgtaacaATGAGATCGAATTATAGA
TGAGTTGTAGGTCGACTTGGCTCACTCGATTTTTCGATTACTTTTAAAGT
TTCTGAAATTCCCAGTTCGCAAACAGGATTTTGTATCTTTTATCCCTCTT
TTGTTGtacagaaaattgaaaattccccTTGGAATTCTTTCTCAATACAA
TTCACTTTAAGAAGGTCTCttgtttttaccattttactttattaaaagaa
aaatatacctTCGTTGTTCTAagtgtaaattttttgattttttatatgat
gtaaattttaagtattttttttgtGCCCTTTATTATGCCATGCTACCGTT
CCACATAACTACGATCTGACGACATTGACATTTTGACCAAGACTTAAATA
GAATTGACTTTCTGACGAAAACATGACTTCGCGATTTAGTACCTGACTTA
CAAGACAAGACTAATTAAGACTGTTACTTCAATGAAACACAGACCTGTGA
GGACTGTTTTTTTAACTACAATACTTTTGAGACAGGACAGACAAAAAAAC
TTCCTTCGACTTCTATCGTTaccacaaagaaaaaaagatttgaggGGAGG
TATCAGGAGGCATCTCAAACAACTAAAAAGGAGGTCTAGATAAAGAAAta
ggaatttcattttcatttgatgCATCAATATCTATCCATCAAACGACGAC
AAGATAATAACAAAACATCAACAttctttttatagtttttttatatagag
agaaaatgtttttgtcaAGTTAATTAAAAAGCTTTTCTTTTAAGACGCAT
TTCCTGACCCCATGTTTCGAAATAACCTCTTTGTAAAGACGAAATACCGA
CCGACATACACGATAACAAAAGAACTACtctcttttttattagaactcta
ttttacaagaaaaatctggcTCTAAATCACCACAAAATTGGAAGACAAAA
GCTTTTTGTTGACTTTCATAAAGTATAAATTTGAAGTCTCCCAACctcaa
ttttggtgaaaaagaaatatgaCCAATCTCCTGAAGCTTGATTCTTTTAG
AGAAAGACCTAACGACAGAACAAAAGACATTGACTGCacaaaacaatata
atattccACCCACACCTCCTGATTACTTTAAACTTTGTTCCTTCACTAAT
TATGTTACACATCATATTACCCATCATctcttgttttttattattaatta
ttttggtattttataaTAAATGTTTTAAAAGATGTCTTTTTTAAATTGGA
GGATAGGTACTGTAATGTGAAATTGGTCTATAATAAGGTAACTATAGTAA
TCAAACGCCTTTGAACTTAATTGGAAtgttggttctttcaaaataTAACC
AGCCTACACCTTCCTTCATTTTTGAAAAGCATTCTactgtcttttttttt
ttaattcttatttattttgttaataACAGCTCCTTTTTGCTCTTCTAAGA
TATCCTGCCAGACATCCTGGAAATTCAGCATGATTTCTCGGTGATGTTCT
CATAGTACAATACCTAAGATCTAAAATCTTCGTGATATTCGttgtaaaat
tcaaatttacgtcactttttctacaaaatgtcaatttttatcaGCTTTTT
TCGAGCATTTGTAATGACGTTTTTAACTAGTGAAAAAGTGTCGTCTGTTA
TATTCAGGCGAATATCACGTGTTCTAGTCTTTTACAGGAATCTTAACAAA
CAACTGACCCtaataattttacattttaattttGCTTTGAATCTGATTAA
CGACTgtcatttcatttttaatatATATAATGATTCCTTTTGTTCAAGAT
TTTTCGAAAGTTTGAAACACCTGGTAAACACACCTACCTACTATGATAAT
AAGTTCGGTATCTCAATTTTGTCATATTTGGCACTCAACTGACATTAATC
ATTATGTCATAAATTGCGATTCATTATGACACATAATGACGTTTCAGTCT
TGATTATGACGTAAGAGATACCCTACTAATTATCGCCAGTAGGAGTTTGT
GTTTGTCTATTCGACTAATTtaataattgataaaataaaaaggagctgga
tttttttcttaatccgatttttgtcaattttctttgtctttctGAATATC
CCTGTCTTTTCGTATACACCCAATGTGTTCATAtggatggagtttttaca
agattttattttcatttatttttctttagttctttTAACTCGTCCATCCT
TTGAAAGGCTAGCTTTCTCTCGTATGATAggagaattgttttttcaaacc
gTG

Coding sequence (CDS) from alignment at scaffold_234:102359..115311+

>TCONS_00053790 ID=TCONS_00053790|Name=TCONS_00053790|organism=Clytia hemisphaerica|type=CDS|length=9075bp|location=Sequence derived from alignment at scaffold_234:102359..115311+ (Clytia hemisphaerica)
ATGAAATTGATTCTACTTGTTTTTGGCTTAATCCAAGCCCATGCATCAGT
CCTTGATGTTTTTGCTTTCACCAATGGACATGAGCCACGAGTTGCCATGA
ACTGTGATCATGTACCATTCTACATTGACTTGAAAACCGGATCATGGGTT
GAAGACAGCGAAGGACTTGAAATTTGTGATCACAACAAAGAAGTTGTCAA
GAAATACTGTCAAAAGATGTACCCCAAACTGAACATCACCAACATTGTTG
AAGCCAATACACCACAAACCTTTAACAACTGGTGCCGATCCGGACAATCC
CAATGTACTGAAGCCAAAGAAGTTGTTCCATACAGATGTTTGGTCAATGA
ATACGAAGCTGATGCTCTTATGGTTCCAGATGGTTGTAAATTTGATCACA
TCCATGACCCAAACCAGTGTTTGAGCCATGACCaatggaaagaaaaagcc
tCCAAAAAATGTGACAGCCAatacaaaatgaaattgaaggaCTACGGAAT
CTTGCTCTCATGCGGTACTGATGTCTTCACCGGTGTTGAATTTGTCTGCT
GCCCAGAGAAAATGCCAGAAACCAAACCAGCCCCAAGTGCTGCTACCCCA
AAAATCACCAAGGATGTCTTCCAAGCTGCTGTTGCCAAATTCTTGCAATA
CTTACCAAGTGTCACCAAGGGATGTGACAGAAGCACCTATTTGACCAAAC
AAGCCTCCATGGGAGAACACCACCAAAGCCAAATCGCTGCTGTTGTCGAT
GAATGGGACAATGCTGAGAAGAGATACAACGACTTGAAGAAAAAAGACCC
TGTTGTTgctgaagaaaaaatgaaacGAACCTTGGAAGTTTTCCGACAAA
CTCTTGCTGCCCTTGAACAAGAGTCCAAGGACGAGAAAGAACGATTGAGA
GTCGAACATGCTGACTGTATCAACACCCAAATCTCCAAGGACAAGAGAGA
TGCCATGATCAACTATTTGGCCTCCATCCAAAAGGAACCTGCCAATGCTG
ACGAAATCTTGGGAGCTGTCCGCAAATTCATCCAAGTCTGCGAACACGAC
AGAGTCCACAGCCTCCGACACTTTGAACATGTTCGCCGACGAAATGCAAG
CGAAGCCGATTCCATCCGATCTGAATTATTGCAACACTTAAAGGGATTGA
ACAAAGTTGTCAATGAAAGCATGGCCCTCTTGAACTACTTGCCAACTATT
GCCAAGAAATTCGGACTCACTGGAAACACTGCTGTTTTGAAACCAAAAAC
TGAATTACCAGAAATCAAGCACGAAGACCATGTCCATGAACGTGTCAAAG
AAATCCTTGAAAACAACAAACACCTTGAGGAAGATGATGATGAAGAcgac
gatgatgatgatgaagaatCTATTTTCGTCACATCCAAACCCGTCCCATT
GAAGAAATTATTGGCCGctgccaaaatcaaaaatacCGTCGAGAAAACAC
CCACTATCAAATCTTTGGGTAAAATGGCTGCCAAGATTAAAAACGAATAT
GATGACTCCGATGATGAGGATGATGATAATGACATCATTGCCGATGCTTT
CCCAGTCCCACAAAAAGACGCACCCACCCACCACAAAGGAAAGAAGGAAC
ATCACCGATCACCGATGGTTATTAACATCATCTTGGGATTGTGTTGTGGT
ATCTTGGTCGTCATGTTGATTGTCGTTATCGTCATGGTCGTCCAACGCCG
ACGTGTCGCCCACACTCGAGTCGTCATTGCCGAAAATAATGATGACCGTG
AGCATTTGATTCAAATgcaaaaaagtggatttgaaaatccAACCTACAAA
TTCTTTTATTattaaATGAAATTGATTCTACTTGTTTTTGGCTTAATCCA
AGCCCATGCATCAGTCCTTGATGTTTTTGCTTTCACCAATGGACATGAGC
CACGAGTTGCCATGAACTGTGATCATGTACCATTCTACATTGACTTGAAA
ACCGGATCATGGGTTGAAGACAGCGAAGGACTTGAAATTTGTGATCACAA
CAAAGAAGTTGTCAAGAAATACTGTCAAAAGATGTACCCCAAACTGAACA
TCACCAACATTGTTGAAGCCAATACACCACAAACCTTTAACAACTGGTGC
CGATCCGGACAATCCCAATGTACTGAAGCCAAAGAAGTTGTTCCATACAG
ATGTTTGGTCAATGAATACGAAGCTGATGCTCTTATGGTTCCAGATGGTT
GTAAATTTGATCACATCCATGACCCAAACCAGTGTTTGAGCCATGACCaa
tggaaagaaaaagcctCCAAAAAATGTGACAGCCAatacaaaatgaaatt
gaaggaCTACGGAATCTTGCTCTCATGCGGTACTGATGTCTTCACCGGTG
TTGAATTTGTCTGCTGCCCAGAGAAAATGCCAGAAACCAAACCAGCCCCA
AGTGCTGCTACCCCAAAAATCACCAAGGATGTCTTCCAAGCTGCTGTTGC
CAAATTCTTGCAATACTTACCAAGTGTCACCAAGGGATGTGACAGAAGCA
CCTATTTGACCAAACAAGCCTCCATGGGAGAACACCACCAAAGCCAAATC
GCTGCTGTTGTCGATGAATGGGACAATGCTGAGAAGAGATACAACGACTT
GAAGAAAAAAGACCCTGTTGTTgctgaagaaaaaatgaaacGAACCTTGG
AAGTTTTCCGACAAACTCTTGCTGCCCTTGAACAAGAGTCCAAGGACGAG
AAAGAACGATTGAGAGTCGAACATGCTGACTGTATCAACACCCAAATCTC
CAAGGACAAGAGAGATGCCATGATCAACTATTTGGCCTCCATCCAAAAGG
AACCTGCCAATGCTGACGAAATCTTGGGAGCTGTCCGCAAATTCATCCAA
GTCTGCGAACACGACAGAGTCCACAGCCTCCGACACTTTGAACATGTTCG
CCGACGAAATGCAAGCGAAGCCGATTCCATCCGATCTGAATTATTGCAAC
ACTTAAAGGGATTGAACAAAGTTGTCAATGAAAGCATGGCCCTCTTGAAC
TACTTGCCAACTATTGCCAAGAAATTCGGACTCACTGGAAACACTGCTGT
TTTGAAACCAAAAACTGAATTACCAGAAATCAAGCACGAAGACCATGTCC
ATGAACGTGTCAAAGAAATCCTTGAAAACAACAAACACCTTGAGGAAGAT
GATGATGAAGAcgacgatgatgatgatgaagaatCTATTTTCGTCACATC
CAAACCCGTCCCATTGAAGAAATTATTGGCCGctgccaaaatcaaaaata
cCGTCGAGAAAACACCCACTATCAAATCTTTGGGTAAAATGGCTGCCAAG
ATTAAAAACGAATATGATGACTCCGATGATGAGGATGATGATAATGACAT
CATTGCCGATGCTTTCCCAGTCCCACAAAAAGACGCACCCACCCACCACA
AAGGAAAGAAGGAACATCACCGATCACCGATGGTTATTAACATCATCTTG
GGATTGTGTTGTGGTATCTTGGTCGTCATGTTGATTGTCGTTATCGTCAT
GGTCGTCCAACGCCGACGTGTCGCCCACACTCGAGTCGTCATTGCCGAAA
ATAATGATGACCGTGAGCATTTGATTCAAATgcaaaaaagtggatttgaa
aatccAACCTACAAATTCTTTTATTattaaATGAAATTGATTCTACTTGT
TTTTGGCTTAATCCAAGCCCATGCATCAGTCCTTGATGTTTTTGCTTTCA
CCAATGGACATGAGCCACGAGTTGCCATGAACTGTGATCATGTACCATTC
TACATTGACTTGAAAACCGGATCATGGGTTGAAGACAGCGAAGGACTTGA
AATTTGTGATCACAACAAAGAAGTTGTCAAGAAATACTGTCAAAAGATGT
ACCCCAAACTGAACATCACCAACATTGTTGAAGCCAATACACCACAAACC
TTTAACAACTGGTGCCGATCCGGACAATCCCAATGTACTGAAGCCAAAGA
AGTTGTTCCATACAGATGTTTGGTCAATGAATACGAAGCTGATGCTCTTA
TGGTTCCAGATGGTTGTAAATTTGATCACATCCATGACCCAAACCAGTGT
TTGAGCCATGACCaatggaaagaaaaagcctCCAAAAAATGTGACAGCCA
atacaaaatgaaattgaaggaCTACGGAATCTTGCTCTCATGCGGTACTG
ATGTCTTCACCGGTGTTGAATTTGTCTGCTGCCCAGAGAAAATGCCAGAA
ACCAAACCAGCCCCAAGTGCTGCTACCCCAAAAATCACCAAGGATGTCTT
CCAAGCTGCTGTTGCCAAATTCTTGCAATACTTACCAAGTGTCACCAAGG
GATGTGACAGAAGCACCTATTTGACCAAACAAGCCTCCATGGGAGAACAC
CACCAAAGCCAAATCGCTGCTGTTGTCGATGAATGGGACAATGCTGAGAA
GAGATACAACGACTTGAAGAAAAAAGACCCTGTTGTTgctgaagaaaaaa
tgaaacGAACCTTGGAAGTTTTCCGACAAACTCTTGCTGCCCTTGAACAA
GAGTCCAAGGACGAGAAAGAACGATTGAGAGTCGAACATGCTGACTGTAT
CAACACCCAAATCTCCAAGGACAAGAGAGATGCCATGATCAACTATTTGG
CCTCCATCCAAAAGGAACCTGCCAATGCTGACGAAATCTTGGGAGCTGTC
CGCAAATTCATCCAAGTCTGCGAACACGACAGAGTCCACAGCCTCCGACA
CTTTGAACATGTTCGCCGACGAAATGCAAGCGAAGCCGATTCCATCCGAT
CTGAATTATTGCAACACTTAAAGGGATTGAACAAAGTTGTCAATGAAAGC
ATGGCCCTCTTGAACTACTTGCCAACTATTGCCAAGAAATTCGGACTCAC
TGGAAACACTGCTGTTTTGAAACCAAAAACTGAATTACCAGAAATCAAGC
ACGAAGACCATGTCCATGAACGTGTCAAAGAAATCCTTGAAAACAACAAA
CACCTTGAGGAAGATGATGATGAAGAcgacgatgatgatgatgaagaatC
TATTTTCGTCACATCCAAACCCGTCCCATTGAAGAAATTATTGGCCGctg
ccaaaatcaaaaatacCGTCGAGAAAACACCCACTATCAAATCTTTGGGT
AAAATGGCTGCCAAGATTAAAAACGAATATGATGACTCCGATGATGAGGA
TGATGATAATGACATCATTGCCGATGCTTTCCCAGTCCCACAAAAAGACG
CACCCACCCACCACAAAGGAAAGAAGGAACATCACCGATCACCGATGGTT
ATTAACATCATCTTGGGATTGTGTTGTGGTATCTTGGTCGTCATGTTGAT
TGTCGTTATCGTCATGGTCGTCCAACGCCGACGTGTCGCCCACACTCGAG
TCGTCATTGCCGAAAATAATGATGACCGTGAGCATTTGATTCAAATgcaa
aaaagtggatttgaaaatccAACCTACAAATTCTTTTATTattaaATGAA
ATTGATTCTACTTGTTTTTGGCTTAATCCAAGCCCATGCATCAGTCCTTG
ATGTTTTTGCTTTCACCAATGGACATGAGCCACGAGTTGCCATGAACTGT
GATCATGTACCATTCTACATTGACTTGAAAACCGGATCATGGGTTGAAGA
CAGCGAAGGACTTGAAATTTGTGATCACAACAAAGAAGTTGTCAAGAAAT
ACTGTCAAAAGATGTACCCCAAACTGAACATCACCAACATTGTTGAAGCC
AATACACCACAAACCTTTAACAACTGGTGCCGATCCGGACAATCCCAATG
TACTGAAGCCAAAGAAGTTGTTCCATACAGATGTTTGGTCAATGAATACG
AAGCTGATGCTCTTATGGTTCCAGATGGTTGTAAATTTGATCACATCCAT
GACCCAAACCAGTGTTTGAGCCATGACCaatggaaagaaaaagcctCCAA
AAAATGTGACAGCCAatacaaaatgaaattgaaggaCTACGGAATCTTGC
TCTCATGCGGTACTGATGTCTTCACCGGTGTTGAATTTGTCTGCTGCCCA
GAGAAAATGCCAGAAACCAAACCAGCCCCAAGTGCTGCTACCCCAAAAAT
CACCAAGGATGTCTTCCAAGCTGCTGTTGCCAAATTCTTGCAATACTTAC
CAAGTGTCACCAAGGGATGTGACAGAAGCACCTATTTGACCAAACAAGCC
TCCATGGGAGAACACCACCAAAGCCAAATCGCTGCTGTTGTCGATGAATG
GGACAATGCTGAGAAGAGATACAACGACTTGAAGAAAAAAGACCCTGTTG
TTgctgaagaaaaaatgaaacGAACCTTGGAAGTTTTCCGACAAACTCTT
GCTGCCCTTGAACAAGAGTCCAAGGACGAGAAAGAACGATTGAGAGTCGA
ACATGCTGACTGTATCAACACCCAAATCTCCAAGGACAAGAGAGATGCCA
TGATCAACTATTTGGCCTCCATCCAAAAGGAACCTGCCAATGCTGACGAA
ATCTTGGGAGCTGTCCGCAAATTCATCCAAGTCTGCGAACACGACAGAGT
CCACAGCCTCCGACACTTTGAACATGTTCGCCGACGAAATGCAAGCGAAG
CCGATTCCATCCGATCTGAATTATTGCAACACTTAAAGGGATTGAACAAA
GTTGTCAATGAAAGCATGGCCCTCTTGAACTACTTGCCAACTATTGCCAA
GAAATTCGGACTCACTGGAAACACTGCTGTTTTGAAACCAAAAACTGAAT
TACCAGAAATCAAGCACGAAGACCATGTCCATGAACGTGTCAAAGAAATC
CTTGAAAACAACAAACACCTTGAGGAAGATGATGATGAAGAcgacgatga
tgatgatgaagaatCTATTTTCGTCACATCCAAACCCGTCCCATTGAAGA
AATTATTGGCCGctgccaaaatcaaaaatacCGTCGAGAAAACACCCACT
ATCAAATCTTTGGGTAAAATGGCTGCCAAGATTAAAAACGAATATGATGA
CTCCGATGATGAGGATGATGATAATGACATCATTGCCGATGCTTTCCCAG
TCCCACAAAAAGACGCACCCACCCACCACAAAGGAAAGAAGGAACATCAC
CGATCACCGATGGTTATTAACATCATCTTGGGATTGTGTTGTGGTATCTT
GGTCGTCATGTTGATTGTCGTTATCGTCATGGTCGTCCAACGCCGACGTG
TCGCCCACACTCGAGTCGTCATTGCCGAAAATAATGATGACCGTGAGCAT
TTGATTCAAATgcaaaaaagtggatttgaaaatccAACCTACAAATTCTT
TTATTattaaATGAAATTGATTCTACTTGTTTTTGGCTTAATCCAAGCCC
ATGCATCAGTCCTTGATGTTTTTGCTTTCACCAATGGACATGAGCCACGA
GTTGCCATGAACTGTGATCATGTACCATTCTACATTGACTTGAAAACCGG
ATCATGGGTTGAAGACAGCGAAGGACTTGAAATTTGTGATCACAACAAAG
AAGTTGTCAAGAAATACTGTCAAAAGATGTACCCCAAACTGAACATCACC
AACATTGTTGAAGCCAATACACCACAAACCTTTAACAACTGGTGCCGATC
CGGACAATCCCAATGTACTGAAGCCAAAGAAGTTGTTCCATACAGATGTT
TGGTCAATGAATACGAAGCTGATGCTCTTATGGTTCCAGATGGTTGTAAA
TTTGATCACATCCATGACCCAAACCAGTGTTTGAGCCATGACCaatggaa
agaaaaagcctCCAAAAAATGTGACAGCCAatacaaaatgaaattgaagg
aCTACGGAATCTTGCTCTCATGCGGTACTGATGTCTTCACCGGTGTTGAA
TTTGTCTGCTGCCCAGAGAAAATGCCAGAAACCAAACCAGCCCCAAGTGC
TGCTACCCCAAAAATCACCAAGGATGTCTTCCAAGCTGCTGTTGCCAAAT
TCTTGCAATACTTACCAAGTGTCACCAAGGGATGTGACAGAAGCACCTAT
TTGACCAAACAAGCCTCCATGGGAGAACACCACCAAAGCCAAATCGCTGC
TGTTGTCGATGAATGGGACAATGCTGAGAAGAGATACAACGACTTGAAGA
AAAAAGACCCTGTTGTTgctgaagaaaaaatgaaacGAACCTTGGAAGTT
TTCCGACAAACTCTTGCTGCCCTTGAACAAGAGTCCAAGGACGAGAAAGA
ACGATTGAGAGTCGAACATGCTGACTGTATCAACACCCAAATCTCCAAGG
ACAAGAGAGATGCCATGATCAACTATTTGGCCTCCATCCAAAAGGAACCT
GCCAATGCTGACGAAATCTTGGGAGCTGTCCGCAAATTCATCCAAGTCTG
CGAACACGACAGAGTCCACAGCCTCCGACACTTTGAACATGTTCGCCGAC
GAAATGCAAGCGAAGCCGATTCCATCCGATCTGAATTATTGCAACACTTA
AAGGGATTGAACAAAGTTGTCAATGAAAGCATGGCCCTCTTGAACTACTT
GCCAACTATTGCCAAGAAATTCGGACTCACTGGAAACACTGCTGTTTTGA
AACCAAAAACTGAATTACCAGAAATCAAGCACGAAGACCATGTCCATGAA
CGTGTCAAAGAAATCCTTGAAAACAACAAACACCTTGAGGAAGATGATGA
TGAAGAcgacgatgatgatgatgaagaatCTATTTTCGTCACATCCAAAC
CCGTCCCATTGAAGAAATTATTGGCCGctgccaaaatcaaaaatacCGTC
GAGAAAACACCCACTATCAAATCTTTGGGTAAAATGGCTGCCAAGATTAA
AAACGAATATGATGACTCCGATGATGAGGATGATGATAATGACATCATTG
CCGATGCTTTCCCAGTCCCACAAAAAGACGCACCCACCCACCACAAAGGA
AAGAAGGAACATCACCGATCACCGATGGTTATTAACATCATCTTGGGATT
GTGTTGTGGTATCTTGGTCGTCATGTTGATTGTCGTTATCGTCATGGTCG
TCCAACGCCGACGTGTCGCCCACACTCGAGTCGTCATTGCCGAAAATAAT
GATGACCGTGAGCATTTGATTCAAATgcaaaaaagtggatttgaaaatcc
AACCTACAAATTCTTTTATTattaa

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_033950	XLOC_033950	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00053790-protein	TCONS_00053790-protein	Clytia hemisphaerica	polypeptide

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_234	supercontig	scaffold_234:102359..115311 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
29.7614	20.4749	82.2161	95.1589	442.464	351.091	323.053	355.561	177.511	238.539	125.092	176.36	268.555	271.621	150.216	91.4682	188.238	195.302	246.834	347.664	253.471	254.566	175.518	222.963	395.507	359.984	951.405	1072.55	100.724	83.3201

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR008155	Amyloid_glyco
IPR008154	Amyloid_glyco_extra
IPR015849	Amyloid_glyco_heparin-bd
IPR019543	APP_amyloid_C
IPR024329	Amyloid_glyco_E2_domain
IPR011178	Amyloid_glyco_Cu-bd
IPR019744	Amyloid_glyco_extracell_CS

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **Molecular Function**
Term	Definition
GO:0008201	heparin binding
GO:0046914	transition metal ion binding

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0008201	heparin binding
molecular_function	GO:0046914	transition metal ion binding

Blast

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BLAST of TCONS_00053790 vs. Swiss-Prot (Human)
Match: APLP1 (Amyloid-like protein 1 OS=Homo sapiens GN=APLP1 PE=1 SV=3)

HSP 1 Score: 192.2 bits (487), Expect = 1.797e-50
Identity = 130/459 (28.32%), Postives = 218/459 (47.49%), Query Frame = 3

Query:  180 RVAMNCDHVPFYIDLKTGSWVEDSEGLEICDHNKEVVKKYCQKMYPKLNITNIVEANTPQTFNNWCRSGQS-QCTEAK-EVVPYRCLVNEYEADALMVPDGCKFDHIHDPNQCLSHDQWKEKASKKCDSQYKMKLKDYGILLSCGTDVFTGVEFVCCPEKMPETKPAPSAAT---------------------------PKITKDVF----QA---------------AVAKFLQYLPSVTKGCD-----------RSTYLTKQASMGEHHQSQIAAVVDEWDNAEKRYNDLKKKDPVVAEEKMKRTL-EVFRQTLAALEQESKDEKERLRVEHADCINTQISKDKRDAMINYLASIQKEPANADEILGAVRKFIQVCEHDRVHSLRHFEHVRRRNASEADSIRSELLQHLKGLNKVVNESMALLNYLPTIAKKFGLTGNTAVLKPKTELPEIKHEDHV 1376
            +VA  C  +  + DL+TG W  D +    C  + + V +YC++MYP+L I  + +A        WC   +S  C     +VVP+RCL  E+ ++AL+VP+GC+F H    +QC S  +  ++A + C SQ  + L   G+LL CG+D F GVE+VCCP   P   P PS                              P+   D F    QA               AV   +   P  T G D              +L  +  + E    QI  V+ EW  A+ +  +L K D        ++ L E F+  L  LE++   E++RL   HA  +   I+  +R A+  +LA++Q +P  A+ +L A+R++++  + ++ H+LRH++HV   +  +A  +R ++  HL+ + + VN+S+ LL+  P +A++         L+P+ +  E+ H +H+
Sbjct:   55 QVAGLCGRLTLHRDLRTGRWEPDPQRSRRCLRDPQRVLEYCRQMYPELQIARVEQATQAIPMERWCGGSRSGSCAHPHHQVVPFRCLPGEFVSEALLVPEGCRFLHQERMDQCESSTRRHQEAQEACSSQ-GLILHGSGMLLPCGSDRFRGVEYVCCP---PPGTPDPSGTAVGDPSTRSWPPGSRVEGAEDEEEEESFPQPVDDYFVEPPQAEEEEETVPPPSSHTLAVVGKVTPTPRPTDGVDIYFGMPGEISEHEGFLRAKMDLEERRMRQINEVMREWAMADNQSKNLPKAD--------RQALNEHFQSILQTLEEQVSGERQRLVETHATRVIALINDQRRAALEGFLAALQADPPQAERVLLALRRYLRAEQKEQRHTLRHYQHVAAVDPEKAQQMRFQVHTHLQVIEERVNQSLGLLDQNPHLAQE---------LRPQIQ--ELLHSEHL 490

The following BLAST results are available for this feature:

BLAST of TCONS_00053790 vs. Swiss-Prot (Human)

BLAST of TCONS_00053790 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
APLP1	1.797e-50	28.32	Amyloid-like protein 1 OS=Homo sapiens GN=APLP1 PE...	[more]

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TCONS_00053790 (transcript) - C. hemisphaerica