TCONS_00053845 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00053845
Unique Name	TCONS_00053845
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	3540

Sequence

The following sequences are available for this feature:

transcript sequence
protein sequence
transcript from alignment at scaffold_234:386765..396610-
coding sequence from alignment at scaffold_234:386765..396610-

transcript sequence

>TCONS_00053845 ID=TCONS_00053845|Name=TCONS_00053845|organism=Clytia hemisphaerica|type=transcript|length=3540bp
CACCCTAATATccttttttctgagaaaaaaaactaaacatcGATTCTATT
TTATTCTAGAAAGGGTAAAAATTTATACACAACCCAGCACAACCATCAAA
CTTTctgccaaaaaaatcaaaaaagttttctcttTTCAGCTCCACCTGAA
ATCACTTCAGACTTTTTGGACACAAAGCAAGTTGTAGGAGATGTTTATGA
ACTGTCTTGTGAAGCATCTGGTCGGCCTTTACCAACAGTCAACATTTACC
AGGGTGGTGTATCTAAAACTACTGGCATTGGAAATGCAACCTTCAACGTC
AAAGTAGCACTGGCTGCAAACGGGGGTTACATCACCGATTACAAGTGTGT
TGCCGGAAACGGAGCTAAAACGGATACAGGCGCTGACAGAGATGCCGAGA
AAAGTATGAAACTCACTATGCTCACTCCTCCAACTATTGAAAAGATCACT
GATGACGTCCAATCAGCTATCGGTTTAAAATTCTCCATCGAGTGCGTTGC
CAATGGTAACCCCATGCCAACTGTCACTCTCAAACAAGGAGGAGTGGATC
TAGTGCCCGCTGATAGCAAAACAGACACAACCTTGATTAACAAGCGAACT
GTTCTTTATGAAGTGTCTTCGGCAACTAAAGAAGATTTTCAAGACATTGA
CTGTATAGCTTCTAATGATATAGGAAGCACTAACAAGACAGTTAAGCTTA
TTGAAGTTGTGAGAGCTGAACCACCCGATGGCTTAGAACGGTATGGCGAT
GCTGGTCTTAAATATATTGTCTTGTCTTGGGACAAAGTGATGTCTGCCGA
CAGTTACCTTATATATGTAAACGACACTGAACCACCCAGAACCATCAAAA
CTGACGAAACAAGTCACCAGGTTCAAAACTTGAAACAGAACACAATTTAT
CTGTTCAACGTTGCCTCGGTCAATTTGGCCGGTGTCGGGGCTAACACGTC
TATAGTATTGTCTACGTCAGACATCATTCCCCCAGGAAATGTAACAAATG
TTCAAGCCAGTGATTTAACAACCACTACCGTGCTAATCCGTTGGGAACAG
CCTGAAAACATTGAAGGGATCGACATCTTATACCGTATATCGTATTGCCA
ACTCAATAACGGTACATTGGTTGGTGCGTGTAAAAGCGAAGACCAAAAAG
ACAATTCTTTACAACTGACCGACCTTGAAGTTGGATCGACGTACCAAGTC
AAGATATCAGCTGTTAATCAGAAAGTGGTTGGCCACCAAACTACATTCAA
TTTCACAACACTAGAGGAGAAAGTGACGCCTCCGCCACCCGCGCCTACCA
ATAAAAAGAAAGGGATGTCAACAGGTGCGATCGCAGGTGTCATCATCGCT
ATACTTCTCATCATTCTGTTGGTGGTGGATCTCTTCTGTTGTTTCTTCAA
CCAATGCGGTTTCACGCACTGTTGTACGGAAACATTCTGTGCAAACAAAT
CAGCAAAATATCAACCGACTGATACCAAGGACGGTGAGAATATGGATGAG
ACAGCAGAACTAAAGCCtaAAAACATTTCGAAAGAAGATGTTGTATGATG
ATATAATGCATTCACAACCATCAACACACTTTAGATGACATTTACAACAA
CCATCACTTACTCATCATGTCTGGTGTTACAGTAGTTTGAGaggaaaagt
tgaaaaagaatTCATCCATTATAAATGGAAGTACATCAGAGGCGTTAGTC
AGGTAGCTTGAtagaagaaagtgaaaattacTCTCCTGTGGATTTATGCT
TGTCTATATTTTACAGGCAACTGATGGTAATATTAAACAAAAGACGAGAA
TCGACTGTGTAACAGTAAATTTGTTCTTTGATATTTGAAGAGTTCGATGA
CTTGTTTTCAAACGAATATGTTGGATAttgcttgattttttttaatgaaa
tacgtttatttattatttttctttcttgattttatcaaaatcttaAATGA
TTATATTGCAAATTCATCATCGAGCCAGTAAGGAGCAAAAGTCTTTCTCC
CTACTAAGAGCAATCGAAATTCATTGAAGAACATTGTGGTTTTCTTtaat
catagtcattataaaaaaaccttgtctgtattgttttagctttattgtCC
AAGTTGCgatttgtatactttttgaccCCGTTACCGTTTCTGACTCTTAA
GGTTGGTTTATTTTCCAGTTACATGATCAAAAACTATACAAAACAAATCC
ATTTAAGGTACACAAGCTCTAATGGTTAATAATAGaaagacaaaagcctt
ccagacgggggttttttataatgactttacTTTAATGCAAGTTTTTCTTC
TATGATATGACTTCTCTAAAGAGAAAAgcacaaaaaattatgttttctcT
TGTGGGAACAGTCAGACTAACTAATAAATTTCCATTCAAGTTATGGTTAA
GTATTTTAATGTAGATACCCGTCCATCCAGGTATATTATAAATTAGTTCA
AACTAATACATTAACTTTATTACTAAGAATCTTAGAACTTTTTTTCTTGG
AATTTTCTTACAAAAACttaggaaatttttaaaaaactaaacTTTAAAAT
TGTAATATTATATTGTTGTTAAGCTATAGATAGTTTTTAATTaaggttta
aaaaatgttttaggtTTAAGAATGTTGATAAGTGATTTTAACCTTGGTTC
CAGGCCTTCTTTGCAGACTAAACTCGAGATTCTTAGAATTTTTCTCCTTT
GTCTTAGCTTTGatacttttttattcaaactgCAGGCTATTTGTTATAAG
AAAAAGTAAGATTTAACCCAGCCTGTTCAAGTCATTATTTCAAccttaaa
gattttgtttttaaatgagagcgatatcgtttgcttactcatcaatttta
attcaccaGCTTTTCCACATTTgattgacatggatgtggagcaagattgg
tcagaaagaggaaaagaacattttttttgcttatatcagcataatataac
aataggaagacactgtcctgacatgaaatatgtgtctgatatgaaacgag
tacacttatgtaaaacctttaaagtgtTATTAAGATAAATCGGATATGTT
TATTTTCCCTACCTAAGGCTTCTTAAAAGGTTATTCTTAATTTTAATGAA
TCCAATACTTGAAGACGTTTTGTGCAATTTCAACGATAGCTTTTGTTTGG
TCTTAATTTTGTTCTAAGGTTATGGCCTAATTTCAGCCTCAGGTCTTTGT
ATGAATTTAAATCTTCTTATAGAAACACGTGTTTTGTCCTGGATCCTAGG
TTAAGATTAAACTTATCGATGTAAAGTTTTCTTCTTAAAGATGATTTTAT
GTCAAGCTCGTTCCCAACTCTCCTCATAAAGAAGGTTGGGTTGGAGGTtg
aattttattgtaaattagttgttttttttgttttctttcattaTTTCCCA
ATCATagttttcttttctaaaatgattttaaattttttacttcatatttt
ttttctgtaaagacAATTCATTCGTTCATCGTCATGATTATTTTAGAATT
ATTGACCCTTATATCGTCAGTTTTATTTCCCTTTTTTGAC

Run BLAST on NCBI

protein sequence of TCONS_00053845-protein

>TCONS_00053845-protein ID=TCONS_00053845-protein|Name=TCONS_00053845-protein|organism=Clytia hemisphaerica|type=polypeptide|length=380bp
MKLTMLTPPTIEKITDDVQSAIGLKFSIECVANGNPMPTVTLKQGGVDLV
PADSKTDTTLINKRTVLYEVSSATKEDFQDIDCIASNDIGSTNKTVKLIE
VVRAEPPDGLERYGDAGLKYIVLSWDKVMSADSYLIYVNDTEPPRTIKTD
ETSHQVQNLKQNTIYLFNVASVNLAGVGANTSIVLSTSDIIPPGNVTNVQ
ASDLTTTTVLIRWEQPENIEGIDILYRISYCQLNNGTLVGACKSEDQKDN
SLQLTDLEVGSTYQVKISAVNQKVVGHQTTFNFTTLEEKVTPPPPAPTNK
KKGMSTGAIAGVIIAILLIILLVVDLFCCFFNQCGFTHCCTETFCANKSA
KYQPTDTKDGENMDETAELKPKNISKEDVV

Run BLAST on NCBI

transcript from alignment at scaffold_234:386765..396610-

Legend: exonfive_prime_UTRCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00053845 ID=TCONS_00053845|Name=TCONS_00053845|organism=Clytia hemisphaerica|type=transcript|length=9846bp|location=Sequence derived from alignment at scaffold_234:386765..396610- (Clytia hemisphaerica)
CACCCTAATATCCTTTTTTCTGAGAAAAAAAACTAAACATCGATTCTATT
TTATTCTAGAAAGGGTAAAAATTTATACACAACCCAGCACAACCATCAAA
CTTTCTGCCAAAAAAATCAAAAAAGTTTTCTCTTTTCAGCTCCACCTGAA
ATCACTTCAGACTTTTTGGACACAAAGCAAGTTGTAGGAGATGTTTATGA
ACTGTCTTGTGAAGCATCTGGTCGGCCTTTACCAACAGTCAACATTTACC
AGGGTGGTGTATCTAAAACTGTATGTATACGTCATAATCTTCAGTGTTCA
AAGTTTGTCCGTCTCAGACGGATTTTTGTCTTAGGTAGAAATGTGCCTAA
GTAGAATTTTGTTGTGGTGATTTTGAAGACGAAAATTGCATCTCTCATGA
GGCCCCCCCAGCGGACCCTCGATTCACGCAATCACGCAATTTTTTTTCGA
AATTCACGCATTCATGCAAATTTTCCTCGAGTTTCACGCAATAACCCGAT
TTTTCAGGAAATCGGAAAATTTTTGGGGNAGTTTCTGTCTAAATCCACCT
CCATCGACTATGAATTGAACAAAACATTGGAAAATCGGGAAAACTGCACA
TGATCCGTGGAAAAAAGGGAAAATTCACGTATTCACGCACAAAATAGCCC
AGATTCACGCATTCACGCAATCAAAAAGTGAGTTTTCACGTTCACGCAAG
TTTTTTCAATTCATGCATTTTCACGCATTTTTTTCCAATTTTCACGCATT
CACGCAACCGAAAATGCCTATTCACGCATTCACGCAAACCGCTGGGGGAG
GCCCTCTCATGCTAAACCAAACGAAGCATCAAATCCAGGAAAGAATAATA
ATAGAACTTCATCATCAACCATTTCTTGTAACAATCACACAAAAATCAAA
TCAATTCAACTCATTAAAGCATAAAAACCAAAGAAAAATAGCGAAAGAGC
AGTAGCAACCCGTTGTTTATTTTTGCCGCCATCTTTATTTTGACTGTTAA
AAAGCAGTATGGTCCGATCAAAAATACGCTTCTGAGTTAGAATCTTCTTA
GGTACAAGAAAAGGCTTTTCCGCCTCAAAATTCTGCAAGACATGGAGAAT
CGGGCCAGATTTGTTGTTTAAAGTCAATTTCCTTCTGTGATGAAAACTTT
TGACCACTGAATCTTGTGTTGATAAAAAGTGTTCGATCTGCTCATTCTTA
TTCGACGGGTCTTACTAAAACCTAAGTACATGAACCAGGCTCACTTTTCA
CGGAACCACACTACGGTTTCGAAAAAGAAAAATAAAGCATAGGCTCGAAC
TAACATCATATTCGGCAAATTATGTAACTTTTTTAGAATAAGGTGGAGGA
ATCCATAGAAAAAATTGACCTCCCCTACTATCGCTTTGATGAACCAAACC
TTTTTGTACCATTGCTATTGGTAAATAGATCGATCATTTTTCGCCANNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCTAAATG
TAGGGGGTAGAAACTATGTACAATGACTTTAAAAAGCTCGACAAAATTTT
GTTTCTAAACTGTTTTGAAAAACTTACGTATCGGGTATAGGATATTCCGA
ATTATCATTCCTTTTAATAGACTGGCATTGGAAATGCAACCTTCAACGTC
AAAGTAGCACTGGCTGCAAACGGGGGTTACATCACCGATTACAAGTGTGT
TGCCGGAAACGGAGCTAAAACGGATACAGGCGCTGACAGAGATGCCGAGA
AAAGTATGAAACTCACTATGCTCAGTAAGTCGTCTTTTATTGGAAATTCT
TTTCATGATATGCACCATTGCAATGTCTTCTGATATTACATCACGGACCC
AATAGCTGATTGGTTGTAAGTGACGTAAGATCAGTTAATACGTCACTTTC
AACCAATCAGCTGTTGTTGTCTTCCACTACATTGCAATGGTGCATATCAT
GAATTGGTGTTTAGCCATCATTCTTCTAGAGGAGATAAAATTAGATTTGG
TATTCTGAAAAAGATTTTCTCTATTATATTGGTACTACAACGGCGCAGGT
TTTTGCCTGGAAGACTTGGTCTCAATTCTACCGGGTGACCCACGAAAAAG
TTCAGACGTTTCCCGACGTCTTGAGGCCGAAGAAATGTCCCAAAGTTCTT
GGAGTTTTGATAGTCTGAACTTTTTCGTGGGTCACCCGGTATTTATTGAA
TCTTGAAATTTGTTTGCTTTTCTATTTTCCCGCAAATAGCAAAAGTGACA
AAGCAGAAAAACAGAAAACATCACTACTTGTGAAAGTAAAACCTTTTTAA
CTGCTCTAGTAGAAGCTTGCTATTTTTGTACCTCATTATTCTAGCTCCTC
CAACTATTGAAAAGATCACTGATGACGTCCAATCAGCTATCGGTTTAAAA
TTCTCCATCGAGTGCGTTGCCAATGGTAACCCCATGCCAACTGTCACTCT
CAAACAAGGAGGAGTGGATCTAGTGCCCGCTGATAGCAAAACAGACACAA
CCTTGATTAACAAGCGAACTGTTCTTTATGAAGTGTCTTCGGCAACTAAA
GAAGATTTTCAAGACATTGACTGTATAGCTTCTAATGATATAGGAAGCAC
TAACAAGACAGTTAAGCTTATTGAAGTTGGTAAGTATCTTACTCTATGTT
TTGTTCTGTTTGTAGGTTTTGATGTTTGATTTCGTTTGTTTGATATTACT
ATAATGGGATAAAATTTCGCGGATTTGGGTGTCATCCGCGAAATTAAGTC
TCAATGGAAATTTGGAAAGGGCTCAACTGCGAAATATTTTTAAACAAAAC
TCAAAAAACGTTAAATAAACTGCCTGTGTTTACTGGCATCAACGAAGCAT
TAATAATGCGCATTTCAACAACCAACATGCATGATTTGGCAGTAAACGGC
ACAAAAGCCGGAAAATCCATCTTCTAATAATAGTGTCATACGCGAAATTA
AGTCTTCGCGAAATCTTGAAATTTTGCGGATGAGCTCAGACCTGCAAAAT
TTAATCCCATTAAAGTATGGCATGGTGCTTGTCTTTCTATCTATCTAGCT
TACTACTAAATGACATCAATTTCTAACGACCTGTAACCTGCACACTGTTT
GTCTTTGCACGTTTTGTATTATTGCTATTGACATGATTTCTAATTTTATG
TCTATCACTAGTCCTTGTGCTTTGCCAAAATTCATAGAAAGGCTTTTTTT
ATCTCTTTTTGCAATTTTAAGATGGAAAAAGATAGCTTCCCAAATGTCTT
TTTAATTACTTTTAATGATGAAATTGAATGCAACAAAACCCTCGGCTAGT
GGCTTCTAGTATCACATTTTTAAAGTCTCTAATGAGGATTTGACTATGAA
ACTGACTTGAAAAAATTAGATATTGTCCGCCAATCGAGAGGTGAACTTGT
GGACTTACGCAAATTCTCTCTACTACCACAAATTATATTTTAGTTTGCAG
AAATTTGTAAAACTTACTTGTTTTTATACATAAAGCAAGCAAAGCCACAT
GCCTATGTGACAGCATCAATAATTTATAATACTGCATACTTCACCCGTAA
TTCACTCACTTCTAATGACCACTACAATAAAAAAAAACACAAAAATACAT
TAAAAATTCACAATCTCGCCATTACACATTTCTAATACTCTTCAGTGAGA
GCTGAACCACCCGATGGCTTAGAACGGTATGGCGATGCTGGTCTTAAATA
TATTGTCTTGTCTTGGGACAAAGTGATGTCTGCCGACAGTTACCTTATAT
ATGTAAACGACACTGAACCACCCAGAACCATCAAAACTGACGAAACAAGT
CACCAGGTTCAAAACTTGAAACAGAACACAATTTATCTGTTCAACGTTGC
CTCGGTCAATTTGGCCGGTGTCGGGGCTAACACGTCTATAGTATTGTCTA
CGTCAGACATCAGTGAGTTTTTTGTTTACATTTTATGTTTCCATTGATGG
CGGCGCAGGGTCAGCAATCTTGATTGTGAAATGTTTCATAGATAGATTGA
ATAAGAAATAATTACAACCAAAATTGTTCCATTCTTTCAGTCAGCAGAAA
GAACTTGCTTTTATTAACTTTACCTTTTCGTGATATGCAGTACTATGACG
GCTAGACGAAATGGGTTTCAAATCTGCCAAAATTAGTACTTTTTTAGTAA
CTGCGGAATCCGAGGCTCAGATTGTTCTTAATTTGTTCTTGGGGTTTTTG
GCCGATTTTCAGGCTCGTTTTCTTATAAAATTGTTCTTATATATAAAAAA
GCGTTTAGTCCAGATTACTGGCCCTGTCGCGTATCATTTTTCTGTTCTTG
TATTTTCCGTTTACCATTTTCGTTTGTTTTTATTACCACGTGTTAGTTTA
ATCCCAAAGTGATGTTCATTCCATTGGCAATAACTAACAAATATCATACT
AATTCCTCGAGGACAACCAATCCGACCATACTAATAGCACGACAAAACTT
TTTAATATTCCACTAATAAGGTTGAAGCCTTATAACGAGGCTCCCTTTAC
ACTGAATAACGTCGCATGAGCTCACGGCTCGAAGTTTCTAGAATTATAAC
TTTATAGCTAAAGAATGGAATGTGTAACGAAATAACCAGGCGCTATTTAA
GAAAACTTCCATTAAATGTATTCATGATATGCACCATTGCAATGTCTTCC
ACGGACCTAGCACCTGATTGGATGAAAGTGACGTACTGACTGTTTTTATG
TCACTTACAACCAATCAGCTGTTAGGTCCGTGATGTAATATCAGAAGATA
TTGCAATGGTGCATATCATGAATACTCTGGTATACTGTATGAATATCTGA
ATATACTTTATTGCCTGTTTATCAGTTCCCCCAGGAAATGTAACAAATGT
TCAAGCCAGTGATTTAACAACCACTACCGTGCTAATCCGTTGGGAACAGC
CTGAAAACATTGAAGGGATCGACATCTTATACCGTATATCGTATTGCCAA
CTCAATAACGGTACATTGGTTGGTGCGTGTAAAAGCGAAGACCAAAAAGA
CAATTCTTTACAACTGACCGACCTTGAAGTTGGATCGACGTACCAAGTCA
AGATATCAGCTGTTAATCAGAAAGTGGTTGGCCACCAAACTACATTCAAT
TTCACAACACTAGGTGAGTTCTTGTTTTTTTAGATTCATGATTGAACTTT
TTACTTTTTTATCACGACGTTTTCTTAAGCACGATGCCATGTTGAATAAT
TTAAAAATCCAGTTTAACAACAATTACACACTGCATAATCAGTAAAGATA
CATGTGCATTAATTTTTGGTTTAGTTTTGTCTTGATGTTGGAGTGTTTTA
AATTATTCAACAGCTTTCAATGAGCTTTCTGTAGTGCACTGCAACAACAA
TGGCTCACACTTTCCGAAATTTCGCGGGTTTTTTTTTTGACAAATCTGTC
ATATTGTAAACAAGAAATTCTCTCAACCGCGAATTTGAATTCCGCGAAAC
TTCTGAATTTTGAGCTGTGAACCACGAAAATTTCTTAAGGTAGACATATG
AGGCGAATGACATCCTACCTTTGGAAGAGTGCTTGGATTTATTTCATTTG
GTAAATTGAGGGGGAATAAAATTCATAAACGAGTTTAGGTTGAGATTCTC
TGTTCCAGTTCGAATAAATGAGATTAAAATACAATCTCTTATTATCATTT
AATTACAGAGGAGAAAGTGACGCCTCCGCCACCCGCGCCTACCAATAAAA
AGAAAGGGATGTCAACAGGTGCGATCGCAGGTGTCATCATCGCTATACTT
CTCATCATTCTGTTGGTGGTGGATCTCTTCTGTTGTTTCTTCAACCAATG
CGGTTTCACGCACTGTTGTACGGAAACATTCTGTGCAAACAAATCAGCAA
AATATCAACCGACTGATACCAAGGACGGTGAGAATATGGATGAGACAGCA
GAACTAAAGCCGTAAGTCCTTTTTTTGATACGAGGCGTTAGCTCCATAGA
TTTATAAAGCCCGTAGGGGTAGATGTCGTGCTTTGGCTGAAAAGTGTGTC
GAGGTTAGGTAGGAAATCCTAACTAGGTCACGTGGCATTACAATTGAATT
TTAGCGCTTGACCAATCAGAAGCTTCGCGGGTTTTCGAAAACAATAGCAG
CAATATTCACATTTTTTTGCTTGGAATTGAGCTTAAAGGGACATAACAGT
ACTTGCGAAATTTGTAAACAAACTGTATGCAGCGGATACAAAATCAAAAC
AAATGTCACATGTCAAAATAAAAAATCAAACCAAATATGGCTAATTTTGA
TTGTTCAATTGTTTTACAAGTTTGTTTTGGACACGTGATTTCAATGTTTA
CATTTTACTACGTTAATGTCCCTTTAATAGATAGAGAAGCATTTTTCGAT
CCCAGAAGCTTTGTTTCGTAGTTGTAAATCATTTTCTTATTTTGATATTT
CTGCTATATACAGCTTGGTCTACCTAGATGCTTGTAAACCCAGAGTCGGC
AAATTGTTAGCTTTGCGTGTTATTTAAATTGACAAAATACGCATGCGCTG
CCTTCTAATATTAGAATCTAATAGACGATATCGGATTTAGATAAATGCAA
TGCATTCTGGTTTCTAGGGACTCTCAAAGGAATTATAATAGATCAATTAT
AATAGATTATAATTCCTTTGAGAGTCCCTAGAAACCAGAATGCATTGCAT
TTATCTAAATCCGATATCGTCTATTCGCTTTAGGAAGACCAGGATACTGT
TCCTCCTGCCATTGAGTTTCAAGCCCGAAGGGCTAGAGGGAGGCGAGACT
CCTGGATGGGAAGTGAAACCACTTATTTCCCATCCAGAACGCCCGCGCTA
AGTTTTTACACAAACGCCGGATTGAAACTAAAATCTATCGCTAGATTTCA
AAAAATGTAGTCCTCCAAAACAAAGGAACCGCTAGATATACAATCCGTCG
TCATGATTGCGGCGCGTTCTATGCGCGTTATGGATGGGAAATAAGTGACT
TCAATTTATCTTGCCTGAGCTGGCCTGAGAAGGGTTAAAGTTTCGCCTCT
AGCCCTTCGGGCTTGAAACTCATGCTTCTTGCCTTCGCTAATGCAATGAC
TTCTTTCAATCCCTTACAAACAAATATTTTCACTGCCAACTCTCTGCTCA
CTTTTTGCTTATTCTCGCTATTAGAATAAGCAGGGTTGAAAGTCGTCTAA
ACTAGACTGGACACGGTTGAGTTTTTAAAAACTTCGAGGTTTGTCATGTG
TTGTTAAGTTACGTAACTTCCACCATTATGAACCCAAACGTTCGATTCTT
GATATTCATGACGTAATCTTTTATGCAGAAACACCTGAAAAACACCGGGT
GTTTGTCACCAGTTTTGAATTAAAACAATGAAACTGGTGACAAACGCCCG
GTCTTTTTTCGTGTGTTTCCGTTTAAAAGAATACGTCATGAATATCAAGA
ATTGGCGTCAAGGTGACCGCCTCTACAGGTTCGAACTTTTGCTCTCATAA
TGAAGGTGATTACATAACTTAACCAAACATTTAAAACCTCTAGACTTTCA
TCGGTGAAAAATTGGTCACTTTCTCGACTTTTAGTGCCTAATTATACTAT
CATCTTTGTTTGTTTGTTTTCAGTAAAAACATTTCGAAAGAAGATGTTGT
ATGATGATATAATGCATTCACAACCATCAACACACTTTAGATGACATTTA
CAACAACCATCACTTACTCATCATGTCTGGTGTTACAGTAGTTTGAGAGG
AAAAGTTGAAAAAGAATTCATCCATTATAAATGGAAGTACATCAGAGGCG
TTAGTCAGGTAGCTTGATAGAAGAAAGTGAAAATTACTCTCCTGTGGATT
TATGCTTGTCTATATTTTACAGGCAACTGATGGTAATATTAAACAAAAGA
CGAGAATCGACTGTGTAACAGTAAATTTGTTCTTTGATATTTGAAGAGTT
CGATGACTTGTTTTCAAACGAATATGTTGGATATTGCTTGATTTTTTTTA
ATGAAATACGTTTATTTATTATTTTTCTTTCTTGATTTTATCAAAATCTT
AAATGATTATATTGCAAATTCATCATCGAGCCAGTAAGGAGCAAAAGTCT
TTCTCCCTACTAAGAGCAATCGAAATTCATTGAAGAACATTGTGGTTTTC
TTTAATCATAGTCATTATAAAAAAACCTTGTCTGTATTGTTTTAGCTTTA
TTGTCCAAGTTGCGATTTGTATACTTTTTGACCCCGTTACCGTTTCTGAC
TCTTAAGGTTGGTTTATTTTCCAGTTACATGATCAAAAACTATACAAAAC
AAATCCATTTAAGGTACACAAGCTCTAATGGTTAATAATAGAAAGACAAA
AGCCTTCCAGACGGGGGTTTTTTATAATGACTTTACTTTAATGCAAGTTT
TTCTTCTATGATATGACTTCTCTAAAGAGAAAAGCACAAAAAATTATGTT
TTCTCTTGTGGGAACAGTCAGACTAACTAATAAATTTCCATTCAAGTTAT
GGTTAAGTATTTTAATGTAGATACCCGTCCATCCAGGTATATTATAAATT
AGTTCAAACTAATACATTAACTTTATTACTAAGAATCTTAGAACTTTTTT
TCTTGGAATTTTCTTACAAAAACTTAGGAAATTTTTAAAAAACTAAACTT
TAAAATTGTAATATTATATTGTTGTTAAGCTATAGATAGTTTTTAATTAA
GGTTTAAAAAATGTTTTAGGTTTAAGAATGTTGATAAGTGATTTTAACCT
TGGTTCCAGGCCTTCTTTGCAGACTAAACTCGAGATTCTTAGAATTTTTC
TCCTTTGTCTTAGCTTTGATACTTTTTTATTCAAACTGCAGGCTATTTGT
TATAAGAAAAAGTAAGATTTAACCCAGCCTGTTCAAGTCATTATTTCAAC
CTTAAAGATTTTGTTTTTAAATGAGAGCGATATCGTTTGCTTACTCATCA
ATTTTAATTCACCAGCTTTTCCACATTTGATTGACATGGATGTGGAGCAA
GATTGGTCAGAAAGAGGAAAAGAACATTTTTTTTGCTTATATCAGCATAA
TATAACAATAGGAAGACACTGTCCTGACATGAAATATGTGTCTGATATGA
AACGAGTACACTTATGTAAAACCTTTAAAGTGTTATTAAGATAAATCGGA
TATGTTTATTTTCCCTACCTAAGGCTTCTTAAAAGGTTATTCTTAATTTT
AATGAATCCAATACTTGAAGACGTTTTGTGCAATTTCAACGATAGCTTTT
GTTTGGTCTTAATTTTGTTCTAAGGTTATGGCCTAATTTCAGCCTCAGGT
CTTTGTATGAATTTAAATCTTCTTATAGAAACACGTGTTTTGTCCTGGAT
CCTAGGTTAAGATTAAACTTATCGATGTAAAGTTTTCTTCTTAAAGATGA
TTTTATGTCAAGCTCGTTCCCAACTCTCCTCATAAAGAAGGTTGGGTTGG
AGGTTGAATTTTATTGTAAATTAGTTGTTTTTTTTGTTTTCTTTCATTAT
TTCCCAATCATAGTTTTCTTTTCTAAAATGATTTTAAATTTTTTACTTCA
TATTTTTTTTCTGTAAAGACAATTCATTCGTTCATCGTCATGATTATTTT
AGAATTATTGACCCTTATATCGTCAGTTTTATTTCCCTTTTTTGAC

Coding sequence (CDS) from alignment at scaffold_234:386765..396610-

>TCONS_00053845 ID=TCONS_00053845|Name=TCONS_00053845|organism=Clytia hemisphaerica|type=CDS|length=6858bp|location=Sequence derived from alignment at scaffold_234:386765..396610- (Clytia hemisphaerica)
TAAAAACATTTCGAAAGAAGATGTTGTATGAAGGAGAAAGTGACGCCTCC
GCCACCCGCGCCTACCAATAAAAAGAAAGGGATGTCAACAGGTGCGATCG
CAGGTGTCATCATCGCTATACTTCTCATCATTCTGTTGGTGGTGGATCTC
TTCTGTTGTTTCTTCAACCAATGCGGTTTCACGCACTGTTGTACGGAAAC
ATTCTGTGCAAACAAATCAGCAAAATATCAACCGACTGATACCAAGGACG
GTGAGAATATGGATGAGACAGCAGAACTAAAGCCTTCCCCCAGGAAATGT
AACAAATGTTCAAGCCAGTGATTTAACAACCACTACCGTGCTAATCCGTT
GGGAACAGCCTGAAAACATTGAAGGGATCGACATCTTATACCGTATATCG
TATTGCCAACTCAATAACGGTACATTGGTTGGTGCGTGTAAAAGCGAAGA
CCAAAAAGACAATTCTTTACAACTGACCGACCTTGAAGTTGGATCGACGT
ACCAAGTCAAGATATCAGCTGTTAATCAGAAAGTGGTTGGCCACCAAACT
ACATTCAATTTCACAACACTAGTGAGAGCTGAACCACCCGATGGCTTAGA
ACGGTATGGCGATGCTGGTCTTAAATATATTGTCTTGTCTTGGGACAAAG
TGATGTCTGCCGACAGTTACCTTATATATGTAAACGACACTGAACCACCC
AGAACCATCAAAACTGACGAAACAAGTCACCAGGTTCAAAACTTGAAACA
GAACACAATTTATCTGTTCAACGTTGCCTCGGTCAATTTGGCCGGTGTCG
GGGCTAACACGTCTATAGTATTGTCTACGTCAGACATCACTCCTCCAACT
ATTGAAAAGATCACTGATGACGTCCAATCAGCTATCGGTTTAAAATTCTC
CATCGAGTGCGTTGCCAATGGTAACCCCATGCCAACTGTCACTCTCAAAC
AAGGAGGAGTGGATCTAGTGCCCGCTGATAGCAAAACAGACACAACCTTG
ATTAACAAGCGAACTGTTCTTTATGAAGTGTCTTCGGCAACTAAAGAAGA
TTTTCAAGACATTGACTGTATAGCTTCTAATGATATAGGAAGCACTAACA
AGACAGTTAAGCTTATTGAAGTTGATGAAACTCACTATGCTCATAAAAAC
ATTTCGAAAGAAGATGTTGTATGAAGGAGAAAGTGACGCCTCCGCCACCC
GCGCCTACCAATAAAAAGAAAGGGATGTCAACAGGTGCGATCGCAGGTGT
CATCATCGCTATACTTCTCATCATTCTGTTGGTGGTGGATCTCTTCTGTT
GTTTCTTCAACCAATGCGGTTTCACGCACTGTTGTACGGAAACATTCTGT
GCAAACAAATCAGCAAAATATCAACCGACTGATACCAAGGACGGTGAGAA
TATGGATGAGACAGCAGAACTAAAGCCTTCCCCCAGGAAATGTAACAAAT
GTTCAAGCCAGTGATTTAACAACCACTACCGTGCTAATCCGTTGGGAACA
GCCTGAAAACATTGAAGGGATCGACATCTTATACCGTATATCGTATTGCC
AACTCAATAACGGTACATTGGTTGGTGCGTGTAAAAGCGAAGACCAAAAA
GACAATTCTTTACAACTGACCGACCTTGAAGTTGGATCGACGTACCAAGT
CAAGATATCAGCTGTTAATCAGAAAGTGGTTGGCCACCAAACTACATTCA
ATTTCACAACACTAGTGAGAGCTGAACCACCCGATGGCTTAGAACGGTAT
GGCGATGCTGGTCTTAAATATATTGTCTTGTCTTGGGACAAAGTGATGTC
TGCCGACAGTTACCTTATATATGTAAACGACACTGAACCACCCAGAACCA
TCAAAACTGACGAAACAAGTCACCAGGTTCAAAACTTGAAACAGAACACA
ATTTATCTGTTCAACGTTGCCTCGGTCAATTTGGCCGGTGTCGGGGCTAA
CACGTCTATAGTATTGTCTACGTCAGACATCACTCCTCCAACTATTGAAA
AGATCACTGATGACGTCCAATCAGCTATCGGTTTAAAATTCTCCATCGAG
TGCGTTGCCAATGGTAACCCCATGCCAACTGTCACTCTCAAACAAGGAGG
AGTGGATCTAGTGCCCGCTGATAGCAAAACAGACACAACCTTGATTAACA
AGCGAACTGTTCTTTATGAAGTGTCTTCGGCAACTAAAGAAGATTTTCAA
GACATTGACTGTATAGCTTCTAATGATATAGGAAGCACTAACAAGACAGT
TAAGCTTATTGAAGTTGATGAAACTCACTATGCTCATAAAAACATTTCGA
AAGAAGATGTTGTATGAAGGAGAAAGTGACGCCTCCGCCACCCGCGCCTA
CCAATAAAAAGAAAGGGATGTCAACAGGTGCGATCGCAGGTGTCATCATC
GCTATACTTCTCATCATTCTGTTGGTGGTGGATCTCTTCTGTTGTTTCTT
CAACCAATGCGGTTTCACGCACTGTTGTACGGAAACATTCTGTGCAAACA
AATCAGCAAAATATCAACCGACTGATACCAAGGACGGTGAGAATATGGAT
GAGACAGCAGAACTAAAGCCTTCCCCCAGGAAATGTAACAAATGTTCAAG
CCAGTGATTTAACAACCACTACCGTGCTAATCCGTTGGGAACAGCCTGAA
AACATTGAAGGGATCGACATCTTATACCGTATATCGTATTGCCAACTCAA
TAACGGTACATTGGTTGGTGCGTGTAAAAGCGAAGACCAAAAAGACAATT
CTTTACAACTGACCGACCTTGAAGTTGGATCGACGTACCAAGTCAAGATA
TCAGCTGTTAATCAGAAAGTGGTTGGCCACCAAACTACATTCAATTTCAC
AACACTAGTGAGAGCTGAACCACCCGATGGCTTAGAACGGTATGGCGATG
CTGGTCTTAAATATATTGTCTTGTCTTGGGACAAAGTGATGTCTGCCGAC
AGTTACCTTATATATGTAAACGACACTGAACCACCCAGAACCATCAAAAC
TGACGAAACAAGTCACCAGGTTCAAAACTTGAAACAGAACACAATTTATC
TGTTCAACGTTGCCTCGGTCAATTTGGCCGGTGTCGGGGCTAACACGTCT
ATAGTATTGTCTACGTCAGACATCACTCCTCCAACTATTGAAAAGATCAC
TGATGACGTCCAATCAGCTATCGGTTTAAAATTCTCCATCGAGTGCGTTG
CCAATGGTAACCCCATGCCAACTGTCACTCTCAAACAAGGAGGAGTGGAT
CTAGTGCCCGCTGATAGCAAAACAGACACAACCTTGATTAACAAGCGAAC
TGTTCTTTATGAAGTGTCTTCGGCAACTAAAGAAGATTTTCAAGACATTG
ACTGTATAGCTTCTAATGATATAGGAAGCACTAACAAGACAGTTAAGCTT
ATTGAAGTTGATGAAACTCACTATGCTCATAAAAACATTTCGAAAGAAGA
TGTTGTATGAAGGAGAAAGTGACGCCTCCGCCACCCGCGCCTACCAATAA
AAAGAAAGGGATGTCAACAGGTGCGATCGCAGGTGTCATCATCGCTATAC
TTCTCATCATTCTGTTGGTGGTGGATCTCTTCTGTTGTTTCTTCAACCAA
TGCGGTTTCACGCACTGTTGTACGGAAACATTCTGTGCAAACAAATCAGC
AAAATATCAACCGACTGATACCAAGGACGGTGAGAATATGGATGAGACAG
CAGAACTAAAGCCTTCCCCCAGGAAATGTAACAAATGTTCAAGCCAGTGA
TTTAACAACCACTACCGTGCTAATCCGTTGGGAACAGCCTGAAAACATTG
AAGGGATCGACATCTTATACCGTATATCGTATTGCCAACTCAATAACGGT
ACATTGGTTGGTGCGTGTAAAAGCGAAGACCAAAAAGACAATTCTTTACA
ACTGACCGACCTTGAAGTTGGATCGACGTACCAAGTCAAGATATCAGCTG
TTAATCAGAAAGTGGTTGGCCACCAAACTACATTCAATTTCACAACACTA
GTGAGAGCTGAACCACCCGATGGCTTAGAACGGTATGGCGATGCTGGTCT
TAAATATATTGTCTTGTCTTGGGACAAAGTGATGTCTGCCGACAGTTACC
TTATATATGTAAACGACACTGAACCACCCAGAACCATCAAAACTGACGAA
ACAAGTCACCAGGTTCAAAACTTGAAACAGAACACAATTTATCTGTTCAA
CGTTGCCTCGGTCAATTTGGCCGGTGTCGGGGCTAACACGTCTATAGTAT
TGTCTACGTCAGACATCACTCCTCCAACTATTGAAAAGATCACTGATGAC
GTCCAATCAGCTATCGGTTTAAAATTCTCCATCGAGTGCGTTGCCAATGG
TAACCCCATGCCAACTGTCACTCTCAAACAAGGAGGAGTGGATCTAGTGC
CCGCTGATAGCAAAACAGACACAACCTTGATTAACAAGCGAACTGTTCTT
TATGAAGTGTCTTCGGCAACTAAAGAAGATTTTCAAGACATTGACTGTAT
AGCTTCTAATGATATAGGAAGCACTAACAAGACAGTTAAGCTTATTGAAG
TTGATGAAACTCACTATGCTCATAAAAACATTTCGAAAGAAGATGTTGTA
TGAAGGAGAAAGTGACGCCTCCGCCACCCGCGCCTACCAATAAAAAGAAA
GGGATGTCAACAGGTGCGATCGCAGGTGTCATCATCGCTATACTTCTCAT
CATTCTGTTGGTGGTGGATCTCTTCTGTTGTTTCTTCAACCAATGCGGTT
TCACGCACTGTTGTACGGAAACATTCTGTGCAAACAAATCAGCAAAATAT
CAACCGACTGATACCAAGGACGGTGAGAATATGGATGAGACAGCAGAACT
AAAGCCTTCCCCCAGGAAATGTAACAAATGTTCAAGCCAGTGATTTAACA
ACCACTACCGTGCTAATCCGTTGGGAACAGCCTGAAAACATTGAAGGGAT
CGACATCTTATACCGTATATCGTATTGCCAACTCAATAACGGTACATTGG
TTGGTGCGTGTAAAAGCGAAGACCAAAAAGACAATTCTTTACAACTGACC
GACCTTGAAGTTGGATCGACGTACCAAGTCAAGATATCAGCTGTTAATCA
GAAAGTGGTTGGCCACCAAACTACATTCAATTTCACAACACTAGTGAGAG
CTGAACCACCCGATGGCTTAGAACGGTATGGCGATGCTGGTCTTAAATAT
ATTGTCTTGTCTTGGGACAAAGTGATGTCTGCCGACAGTTACCTTATATA
TGTAAACGACACTGAACCACCCAGAACCATCAAAACTGACGAAACAAGTC
ACCAGGTTCAAAACTTGAAACAGAACACAATTTATCTGTTCAACGTTGCC
TCGGTCAATTTGGCCGGTGTCGGGGCTAACACGTCTATAGTATTGTCTAC
GTCAGACATCACTCCTCCAACTATTGAAAAGATCACTGATGACGTCCAAT
CAGCTATCGGTTTAAAATTCTCCATCGAGTGCGTTGCCAATGGTAACCCC
ATGCCAACTGTCACTCTCAAACAAGGAGGAGTGGATCTAGTGCCCGCTGA
TAGCAAAACAGACACAACCTTGATTAACAAGCGAACTGTTCTTTATGAAG
TGTCTTCGGCAACTAAAGAAGATTTTCAAGACATTGACTGTATAGCTTCT
AATGATATAGGAAGCACTAACAAGACAGTTAAGCTTATTGAAGTTGATGA
AACTCACTATGCTCATAAAAACATTTCGAAAGAAGATGTTGTATGAAGGA
GAAAGTGACGCCTCCGCCACCCGCGCCTACCAATAAAAAGAAAGGGATGT
CAACAGGTGCGATCGCAGGTGTCATCATCGCTATACTTCTCATCATTCTG
TTGGTGGTGGATCTCTTCTGTTGTTTCTTCAACCAATGCGGTTTCACGCA
CTGTTGTACGGAAACATTCTGTGCAAACAAATCAGCAAAATATCAACCGA
CTGATACCAAGGACGGTGAGAATATGGATGAGACAGCAGAACTAAAGCCT
TCCCCCAGGAAATGTAACAAATGTTCAAGCCAGTGATTTAACAACCACTA
CCGTGCTAATCCGTTGGGAACAGCCTGAAAACATTGAAGGGATCGACATC
TTATACCGTATATCGTATTGCCAACTCAATAACGGTACATTGGTTGGTGC
GTGTAAAAGCGAAGACCAAAAAGACAATTCTTTACAACTGACCGACCTTG
AAGTTGGATCGACGTACCAAGTCAAGATATCAGCTGTTAATCAGAAAGTG
GTTGGCCACCAAACTACATTCAATTTCACAACACTAGTGAGAGCTGAACC
ACCCGATGGCTTAGAACGGTATGGCGATGCTGGTCTTAAATATATTGTCT
TGTCTTGGGACAAAGTGATGTCTGCCGACAGTTACCTTATATATGTAAAC
GACACTGAACCACCCAGAACCATCAAAACTGACGAAACAAGTCACCAGGT
TCAAAACTTGAAACAGAACACAATTTATCTGTTCAACGTTGCCTCGGTCA
ATTTGGCCGGTGTCGGGGCTAACACGTCTATAGTATTGTCTACGTCAGAC
ATCACTCCTCCAACTATTGAAAAGATCACTGATGACGTCCAATCAGCTAT
CGGTTTAAAATTCTCCATCGAGTGCGTTGCCAATGGTAACCCCATGCCAA
CTGTCACTCTCAAACAAGGAGGAGTGGATCTAGTGCCCGCTGATAGCAAA
ACAGACACAACCTTGATTAACAAGCGAACTGTTCTTTATGAAGTGTCTTC
GGCAACTAAAGAAGATTTTCAAGACATTGACTGTATAGCTTCTAATGATA
TAGGAAGCACTAACAAGACAGTTAAGCTTATTGAAGTTGATGAAACTCAC
TATGCTCA

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_033978	XLOC_033978	Clytia hemisphaerica	gene

The following polypeptide feature(s) derives from this transcript:


Feature Name	Unique Name	Species	Type
TCONS_00053845-protein	TCONS_00053845-protein	Clytia hemisphaerica	polypeptide

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_234	supercontig	scaffold_234:386765..396610 -

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.11146	1.40318	1.32657	1.87486	40.1305	29.0805	27.0695	32.4193	20.1916	24.8893	20.368	13.5159	18.4061	16.0149	13.6085	13.4269	25.2774	21.0815	13.2833	17.1857	17.0125	19.0515	12.9595	16.0569	49.0503	45.9662	47.171	38.5027	13.3625	11.673

Annotated Terms

The following terms have been associated with this transcript:

Vocabulary: **INTERPRO**
Term	Definition
IPR003961	FN3_dom
IPR013783	Ig-like_fold
IPR013098	Ig_I-set
IPR007110	Ig-like_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

GO Annotation

GO Assignments

This transcript is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding

Blast

The following BLAST results are available for this feature:

BLAST of TCONS_00053845 vs. Swiss-Prot (Human)

BLAST of TCONS_00053845 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0


Match Name	E-value	Identity	Description

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TCONS_00053845 (transcript) - C. hemisphaerica