TCONS_00053850 (transcript) - C. hemisphaerica

Overview
NameTCONS_00053850
Unique NameTCONS_00053850
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2726

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00053850 ID=TCONS_00053850|Name=TCONS_00053850|organism=Clytia hemisphaerica|type=transcript|length=2726bp
ACAACATTAGGGGACTTGTTTTGGAAGAGAGATTTCTTTCCACTTGAGCC
AGGATTTTGGGTTGTGTAGACCAAGAGCCATTGACAAAGGTATTTTGAAA
TATCACCAGCTTGTTCAAACTTCCATGGAGACCCCTTGTTAAGTGTGTGT
GGTAGCTTTAAGATTGCTTGTCTTGGAATTCCTGATTGAGGCTCAAGTGC
TGGAAAAGTAATGCTGTTTAAAAGGGGTGCTTTTACTGACATGTCTTCTA
AGTTGCGTTGAATGATACTGTAAATCAAACCAAACATTCGCTTCCATTTT
AAATCTGGTGGCAATTCGCTTATATTTGTGTATGATAATTTGAGAAAAAG
TACAATCAGTAGTTTATTTCTATGGTTGATACCACTTTGGGCAGCAAGAA
CATCACTGAAAGTGGTCAAATGacaaagaaattcaaagattgttttcttg
aaatttgggtGCAATGATCCAGGTTTGGCTCCATATAAAATTAATCTTAC
AGCAGATTTCAGTTCTGTTGTGATTGATACCTTCTTTCCCGATTTAACTT
CTTCAAATTTGGCTAATAAAGTTTTGCAAACTGTATAAAGTTCCCTGTCT
GTGAAAGCTTGACCACTTACCGCCGCCATATTTGTTTTCTTTCCACCGCA
GATGATTTTTCCGGAATTTGTTGACCTTTGGTTGATCTCCTGTAAGAAAA
GTTAAGGCTCTGAGGAAGAGAACATTGTTTCACGCCTGCATCACATGAGA
AATGAAAGTTGaataaaatcgaaagtgaattGCAAATGCGCCATTTTGGC
TTTCATGGCAGTGATTGCAGCAACTTGCAGTGCAGCAATCAATGGACATC
CTCATCCCAGAAGTTCTGCTTGTTGCTTATGTTGCATCATTATTATAGTG
CTGGACCAAATGGAAGATATCAACAGCGTTATTTGATTTCAGATGCATAT
TTTGATGGAAAAGGACCCATTCTCTTTTATACTGGGAATGAAGGAGATAT
TACTAATTTTTGGGACAACACCGGTTTTGTCTTTGCACTTGCTAAGAGAT
TCAAAGGCTTGATCTTATTTGGAGAACATAGATATTATGGGAAATCTTTA
CCATTTGGTGACCAATCTTTCAAAGGAGATAACATTGGCTTCCTCACAAC
TGAGCAAGCATTAGCAGATTTCGCATACCTTGTCAAGCAAGTGAAAAAAG
ATCATTCTGCTCAAAATAACACAGTATTTGCTTTTGGTGGAAGcTATGGA
GGTATGTTGACAGCATACATGAGATACAAATATCCTGATATCATTGATGG
TGGAGTTGCCAGCAGTGCTCCATTCATGACTGTTGCTGGAAACAGACCAA
GATCAGAATTTTGGGAAGCTGTCACAAACACATTCCATAAGGCAGACTCA
ACTTGTCCTACATCAGTTCAACAAGGATTTTCAGCACTGATCAAGCTTTT
TGATTCTGGCGATGTTGGAAAACAAGTCATCCAAAGCACCTTCAACTTGT
GTCCTGAGCAAATGAAAAACCCTAACCTCAAGAATAATGTTTTGTTATGG
GCTAGGAATGCATTCACCCTGTTGGCTATGGTTGATTATCCTTATCCAGC
TGATTTCATGGCAAAATTACCAGGGCATCCGGTCAATGTTGCTTGTAGTT
ATATTAAAGGTGCCAACAAACTATCTGGACTTGCTAACATCACTTctTTG
TTATATGGACCAGATGCAAAGTGTCACGACACTTTCACTGAGTATGTCTA
TTGTGCTGACCCAACTGGCTGTGGAACTGGACCTGATGCTCCACCATGGG
ACTACCAAGCTTGTACTGAATTGGCACTGCCAGGGAGCAGCACTAATGAA
ACTGACATGTTTCCACCATTACAATTTACTTTGGAGATGCGACAGCACTA
TTGTGCCGGTAAGTTTGGTCTTGGCATGTCCAGAAATGACTGGTACGGAA
CTCACTATTTTGGTACACTTGATGAAATCAAACATGCATCTCGTTTGATC
TTTCCAAATGGGGATTTGGATCCTTGGATGCCGGGAGGTGTGTTGGAAGA
CTTATCTGATGACCTTATTGCCATTGTTATTGAAGGTGGAGCTCACCATC
TTGATTTAAgAGAAGCAAATGATGCTGATCCACAATCTGTGATTGATGCT
CGTGAAAAAATCGCAACCATCCTCCAAAATTGGATGGAGCACCCTGAAAA
GAAATGAACGAACACGGAATGATCAATTGTCATCAGTCATTTCTTAGTTT
TAATTTATCATGGGGAATCATGGCTTAGCTCTAATCTAGAAGGCGGCTTT
CTACCCTACCTAGCCTACTTGCAAAAGTGGCCAGAAAGTTATTGCATTGA
CATTAGATGATCAACCAACTTTCTGCCCACTTCATTCACAAGTAAGATTG
GCAGGACtgaaagtgggctgtctaaaccAGAGTTATAGCAATTTCTTTGT
TGATCAGACACACAAGCAAGTCTTCAGAGTTTTAAGATATACAAGAAGTA
AAGATTAAAGCATAGAGGTCCTGATTCCCAAtgattcattttgactataa
agACCTATGACTTGCTAATGAATTGGATACTAGgagctaaaaacaaaaaa
tgacaactttTATAGCCTATTATtgattgaaattgtttttgtttaaattg
tttttgttaaaatttcctTTAAATCTTGACAActttgattttaagatttt
cgtTTATGTCTAAAATTTAACATTAC
Run BLAST on NCBI

transcript from alignment at scaffold_234:430308..439651-

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00053850 ID=TCONS_00053850|Name=TCONS_00053850|organism=Clytia hemisphaerica|type=transcript|length=9344bp|location=Sequence derived from alignment at scaffold_234:430308..439651- (Clytia hemisphaerica)
ACAACATTAGGGGACTTGTTTTGGAAGAGAGATTTCTTTCCACTTGAGCC
AGGATTTTGGGTTGTGTAGACCAAGAGCCATTGACAAAGGTATTTTGAAA
TATCACCAGCTTGTTCAAACTTCCATGGAGACCCCTTGTTAAGTGTGTGT
GGTAGCTTTAAGATTGCTTGTCTTGGAATTCCTGATTGAGGCTCAAGTGC
TGGAAAAGTAATGCTGTTTAAAAGGGGTGCTTTTACTGACATGTCTTCTA
AGTTGCGTTGAATGATACTGTAAATCAAACCAAACATTCGCTTCCATTTT
AAATCTGGTGGCAATTCGCTTATATTTGTGTATGATAATTTGAGAAAAAG
TACAATCAGTAGTTTATTTCTATGGTTGATACCACTTTGGGCAGCAAGAA
CATCACTGAAAGTGGTCAAATGACAAAGAAATTCAAAGATTGTTTTCTTG
AAATTTGGGTGCAATGATCCAGGTTTGGCTCCATATAAAATTAATCTTAC
AGCAGATTTCAGTTCTGTTGTGATTGATACCTTCTTTCCCGATTTAACTT
CTTCAAATTTGGCTAATAAAGTTTTGCAAACTGTATAAAGTTCCCTGTCT
GTGAAAGCTTGACCACTTACCGCCGCCATATTTGTTTTCTTTCCACCGCA
GATGATTTTTCCGGAATTTGTTGACCTTTGGTTGATCTCCTGTAAGAAAA
GTTAAGGCTCTGAGGAAGAGAACATTGTTTCACGCCTGCATCACATGAGA
AATGAAAGTTGAATAAAATCGAAAGTGAATTGCAAATGCGCCATTTTGGC
TTTCATGGCAGTGATTGCAGCAACTTGCAGTGCAGCAATCAATGGACATC
CTCATCCCAGAAGTTCTGCTTGTTGCTTATGTTGCATCATTATTATAGGT
ATAACTTCTATGCATCAAGTAATCTGGTATTTATGTTGATTTATATAAAG
AGACTTTTCTGTGGAGCTTAGGGGTGGTATAGAACACTGCGATCTCGTTT
CGGAAGTTCAAGAAGTTCTTTTCACGAATTATTTTCTCTTTCCTCTAATT
GCTGTGGAAGCGTTCGGTAAATAAGTCAGAGTTCCCTTATAATTGCGTCT
AATTGCAGAAGACTTTTTTCCGAAATAACTCACACTTCTTATTTAATTAC
GTTGCTTTGGTAACCTAATTTATATATCCACAAAAAGAGACAAAACATAA
ATGAGCAAATGACAGAACATATTTTTGCCATATTTAAATCTGTTTTTTCA
AGTTTGAACCGTGTTAAGAAAAAACTCAAAATTTGGCCTTATCCATGTGA
AATTGTAACAAATAAATTAAGATTAAGAAAGAAAAAAGGTTCGTTTCTTG
TAAGAGCGGAATCTATTCTTGAAAAATGTGAAAATTGAAGGTGATTTTTG
TGATTAAAAAAACAATCCCTCGACTACATACACGACTCCCTCGACTACAT
ACACGACAAAAGATCTTCATTTAAACAGTCATTTTTTTTTTTCAATTTTC
TCAATTTTAGGTTGATATCGAAGGCAAATCTATTTTCAATACACCAATAT
TGAAATTAAATTAAAATATTATGTTTTACAGTCAAAATATTGAAAATAAG
TTTCGTGATTGAAAAATTAACAAAAATCGGCGTAATTAAACTTCAATTAC
TTAAGCTAATTTTGTAGAGAGCGAGATCGCCGTGGAAGTGGGTAGACAGT
TCCATCAATATTCCAAACCAATTTTTGAAAACATGATTTAAACAGGCGTG
TAATTTCAGGACTGAATTTTTTTAACATTTTCTTTGAGAAAAACTTGGTT
TCTCTTAATTATATTAAATATATGAATGTTGTAAATTCATATAAATATTA
AATGTCTTATTTGGTATGAAAACATAGTCATAAATATACTTAGGGTGGAA
ATATTTGCNNGAGTTTACCGTCGGCCGCCCGCATCTCTAAAAAGCACCCG
CATGAAAATTTCATTATCTTCAAAATTCCTAAAATTTTCATTATTTCTAT
ATTTCTTTACAACTACAACCTCCATCGTTGTTAAAATCGTCTCTACGCAG
GATTCCCTCTACGCATGACTTTTTTCCCAGAGTAAACACGGGTAAACAAA
GAAGATTTTTTACAGAAAATGTGACCGCCCTCAATCCTACAACTAACAGC
GGGCCTCACGCCCATCTATCTGCCTAACCGCCCTGGCGGCCATTTTAGTT
TTTTGCCAAATCTAGCGCCACTGTAGCAATCGATCTTTATTTTTCGTTTG
CAAAACATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNAATGGTGGATAAGGTGCTGTTGGGAAAATAATGAATAAT
GAATAATAAAATCATGCCGCATCTATTTTTGGGTAAGTTCACGACGGTAA
ACTCATATGTAAATTTCATCGGCCCTAGTAAACTGGTCCTGGTTTTAAAC
TGCAGCGTGTCCAGGGGAAGCTCGTAAAGTTTTTTTGAGCGATATAAACA
AAAAACAGACAAATCTTATTTTGTACTATTTTGTTTGACTGGACATGATG
AATCAATTTAACATTTAACATGGCCCGAATGACTCGGGTCATGTTCGGGC
CAAAAGAATTGATAGGGTCTCTCGACACGAACATGGCCCGAAGAGGCCCG
AGAATTCTCGGGCCATGTCGAGGGTCGTCGGCAATCACAAATATCTTCAT
TTCGCATCCTCGTTGGGTCTAAAAAGTGAGTCGGTCGGTCGTAAAAAATT
TCGGGTTTCCATTTTTCCATCCATTTTTGAAGTGCATTCTTGAGGAAACT
GCCAGTGCCAGCCAGCAGCCAAAACAACCGCATGTAATGGGTGGTTTAAA
ATTATGACCTTTGAACACTATTAAACTCCAACCCCAAAATGGCGCATGTA
ATGATAAACAAAATCAAAATGCTGCAAATGCGCTAAAAATCGCTTGCGAA
AAATCAGCAATAATAAAATTTGAACGAAGGAAAGGTCATTGACAGAAAAA
GTCCGACAAATTTACCGACTCACCGGCTCAATTATTTTCAATTTTCAAGA
GTCGGTCGGGCGATGCGAAACGGAGATATTTGTGATTGCCGCCTAACTAG
CCCAGAGAAAAATTTTAAACCTTTATTATTTGAATGCATGCCTTTTTAAT
ACTCAAATATAAAAAAATTAAAATTTTTTAACTTGGTCATTAGTCAAAAA
AGTCATTAAAATTGATAAGCCTCTGCAACAATGGAGTGCAAGGCTGAAAG
CCACATGAATATGGTTCATCCTATAAAAGGAAGTTCATTCTATGGTGGCC
TATCTTGAAGTCTAAGTACATGCGGAAATGGGAACTTATAAAAACAACAT
TGTACAACTTTCCCTCCCTGCACTAAAAGATTCTCCTTACTTTTTTTGTA
ATTTTTCAACTACCCACTTGAAACACTTGTGGAAATTATGTAGAAAACGA
ATTTATAAAACTAAAACGTAAGAAACACTTATTTTCACAAGAAACAGAGA
AATCAAATTGATAAAGCTAAGCATAAGAGACACTCGTAAAAGTTATATAC
AAGATAGCAAATTGATCAAACCAACCATAAGAGGCACTCGTTAAAGAAAG
CAAATTGATAGTACTAAGCATAAAAGAGACCCTTATAAAAGCCAGGAAAA
AAAGCCAATTCATTACTTTAAATGGACCAATTTTTTCGGGGATTAGATTT
CACAGACTTCACTGATTTAGTTGTCATCTGACAAAATAAGTTGCAATGTA
AGTTTGAAAAGGTCAAAGATTAACTGCAAACTTTTTTTGAATTAAACTCC
AAAAAAAGAACCAAGTCAAAAACAATGAGTCATCCGCAAAATTAAGTCTC
CGCAAAATCTTAATAAGATTTCCCAGATGAGCTTGACCCAGAATTTAATC
CCCACATAAATCAATCCCATTAAGGTAAACGAAGCAGAGGAGACTGTCGT
AAAAGTAAAAAAGAAAGCAAATATATAAAACTAAGAACTAATAAGAAACA
CTCATGAAAGTTACAAAGAAATCAAATTGATAAGACTGAGCATAAGAGAC
ACTCCTAAAATTTTATCAGGCCCGGGGACCTTGTTCTCAGGGGGGACCTA
GAACCCCAGTTGGAGCCATGTGCTTTTATCACTATTTGAAGTGTTTTGTG
CTTAAAGAGTTCACTATCAGCAAAAAGAGGTAAAAGAATCAGGGGTTAAA
GAATCCTATATGCACTATACTGTAAACTGTATAGACTTTGTGCATTATTA
CAATAACTTTTTGTTTTTGGATAGGAAATATGAAAATAATATTTCTATTT
GTATGTATTGGGCTGGCTTTAGCTTACCCACATCCTCTAAAGTCAGAACC
ATATCAGACCAAATATATTGGTCAATTCATTGATCACTTTAACTTTTTGG
GAAGTGCTGGACCAAATGGAAGATATCAACAGCGTTATTTGATTTCAGGT
ATATATAGAAGATAGTTGGACAGAAATTCTTCGAATTTCTTCACATATAT
ATAATTTTTCAGCATTTATACGATACAAAGGAAAATATCTCATTTGCATA
ATTTTTCCTGTGTTATTTTGAAAGGAACAATCAATTTTCATAATCTTTTT
ATAATCTTTACTCATCATCCTTATATTATTTCAGTTTAAAAATGTATGGC
AAATAATATTTATGAAAATTGAACTGGCTTGTTCTTTTTCAGTGTAAATT
TTGCAACTATTTGTGTTATTGTAATGAGAAACCACATCCTGTATAATTAT
TTTCTATTGATCTTTTTAGATGCATATTTTGATGGAAAAGGACCCATTCT
CTTTTATACTGGGAATGAAGGAGATATTACTAATTTTTGGGACAACACCG
GTTTTGTCTTTGCACTTGCTAAGAGATTCAAAGGCTTGATCTTATTTGGA
GAACATGTATGTCACTGAAACCTATTGATATTTGAATAACTTGTCTTTGT
TCATCTGAATTCCTTTTTTAATGTCTATACTTAGCTTGATCTTTAAAAAA
AAGAGAAAACCAATTATATGATATTATTTTCACCTTGAACTCCAAAGCTT
TTATTTTTTTCAAATTTTTAAGTTAAAATTGAATCTCTGATAATAATAAT
TCCAGTTTTTCTTGTGTAACTTATTTTCCTGTGTTTCTATCTACTTGTAT
GTTTTATGGGGAAAAAGAATGCTGCTATTATCATTTGATTCTTCCCGAAA
TGTTTTGGTCCATTCTCAAGGGGAATGATATTTCTTATATCTATTTATAG
AGATATTATGGGAAATCTTTACCATTTGGTGACCAATCTTTCAAAGGAGA
TAACATTGGCTTCCTCACAACTGAGCAAGCATTAGCAGATTTCGCATACC
TTGTCAAGCAAGTGAAAAAAGATCATTCTGCTCAAAATAACACAGTATTT
GCTTTTGGTGGAAGGTATGTGATTGTTTTTTGCTATTTAATAACTCAACT
CTTTGTTCTCTTTTTACTACTACAGACAGTTAGTTTTGAAACTAACGAAT
ATTTAAATCACTCTTAACTATCAAAGTTTGTGGAAAATTGCTAAACTTAG
ATTTTAAAGAAATTACCTTCAATTCTAAAACTGAGTTCCAGTAGTTTTAG
TCTTGAAGTTTGAGTAGTAGTCTGGTTTTACTTCAACGATTTAAGCTTTG
CAACCAAAGTCCTGTTAAATTTAATTTTCAGCTATGGAGGTATGTTGACA
GCATACATGAGATACAAATATCCTGATATCATTGATGGTGGAGTTGCCAG
CAGTGCTCCATTCATGACTGTTGCTGGAAACAGACCAAGATCAGAATTTT
GGGAAGCTGTCACAAACGTATGATGATATTTCTACATGATAATTATTCAA
AAATATTCAAAATTCATACCATTCATATATTAAGTTTATAACCAGTCTAA
ATCATTTGAAGCATTTGATCACGCTCTCTGAGGAGTGCAATCAACCATAC
ACCATAAATTAAGACTTTTCTATTAAAAATACTGTGTGATAAACTAGCAA
AACTTTTAGGAGTGTGATTGACACACGTCTTGAGATTTTAAATAAAAAAA
CCCTGTATACTATACAAATAATACCAATATGCTCTTCATTTTTCTAGACA
TTCCATAAGGCAGACTCAACTTGTCCTACATCAGTTCAACAAGGATTTTC
AGCACTGATCAAGCTTTTTGATTCTGGCGATGTTGGAAAACAAGTCATCC
AAAGCACCTTCAACTTGTGTCCTGAGCAAATGAAAAACCCTAACCTCAAG
AATAATGTTTTGTTATGGGCTAGGAATGCATTCACCCTGTTGGCTATGGT
TGATTATCCTTATCCAGCTGATTTCATGGCAAAATTACCAGGGCATCCGG
TCAATGTTGCTTGTAGTTATATTAAAGGTGCCAACAAACTATCTGGACTT
GCTAACATCACTTGTAAGTAAAAGCTATATCTGGAGAATATAAAGTGCTA
AATACCCACTTTGAAAGGTCTGCTAGCTATCCTACCTAGTTCCTAGTCTG
GAAAACAAGGCATTGTACCCTGGAGATATTTTAAAATCAAACTTTCAATT
TCAAAGACCTAGTTCAAAAGCTAATAAATGAAGATATTGATTGATATTGT
AAAATGGCGCAGTAGTGTAGTGGTCATCATTCTTGACTTTCGTGCTGGAG
GTCAGGGTGCGATTCCCACTAGGTGCTGCGATTCACTTGGCAAGTGAATG
TACCTTGGCCCGGGTCAACCCATACCATGTGAGGGAAATAGGGTACCATC
ACTCTGATACAAGAGTATCGGGAGATATGCTGGACATTAAATGTGGTGTG
GTGATGGTTCTCATATGTTCAGTACCTGCGAGAACGCAAGGTTCTCCCGT
ACTGTTCGAGTATCATAATCGATACAGCACGGCTCTGATGTGTCGCGAGC
ACAGAGTACAATGTCTGGTAAGCGCTGTGATTTCCCCATCTAGGGGTAGG
AAACTATCCCAGGATAGGGCCCGGTCCGATGATATCGGAGGGTCAGCTTC
TCTCTCTTCACTCTCATTGTAAAATGTAATGATAAATAGTCCTCATATAC
TTCTTTGGCCCTCTTTAGGCGTGTTTACACAGACAATCTCTCTAATGATA
ACATGGTTGATAAATGTCCTAATCAAGTTAAGTTATATCCAAGAAAGAGT
CTTAACTTAACTTTTCATCTTTAAAAAAAAATTGATGCTAATCTAAACAA
TTGCATTTTTGTCTTTTTAGCTTTGTTATATGGACCAGATGCAAAGTGTC
ACGACACTTTCACTGAGTATGTCTATTGTGCTGACCCAACTGGCTGTGGA
ACTGGACCTGATGCTCCACCATGGGACTACCAAGTAAATGATTTGATTTA
CATTAAGGAAACTTATTTTGGCGAGAACTAATCTTGGTGAGTTTAGACGA
AATTCACCAAAATTAGTTATGACTAAAATTAGATATTATACTCACTCGCC
AAATTAAGTTCTTGCCAAAATAATCCCTAAGTTTCATCAAAATTGCTTAA
AATTGGGCAAAAGAGGACATTTAGTCAGTCATCCCCCAAAACTAATTCTA
ACCAAATTAAAAAGTTTGACTATTTGTCTATATTACATTATTAGTTTTCA
CAAAAATAAGCTCCCTTATTAAAAATGTATCTTTAGTCTCGTTGAATAAT
GTATTCACTGGAATTCGGTATATACATATTTCTTTCATTGACCTCAGTGA
CTTGCCATCCAAAAGAAAAACTAACTTTAAATTTCAACATGGATTGACTT
GCAAGCTGAAATATAAAGATCTATGTGAAGAAGTATCCAAAAAATTAATA
CTTTTATGATGATAGGCTTGTACTGAATTGGCACTGCCAGGGAGCAGCAC
TAATGAAACTGACATGTTTCCACCATTACAATTTACTTTGGAGATGCGAC
AGCACTATTGTGCCGGTAAGTTTGGTCTTGGCATGTCCAGAAATGACTGG
TACGGAACTCACTATTTTGGTACACTTGATGAAATCAAACATGCATCTCG
TTTGATCTTTCCAAATGGGGATTTGGATCCTTGGATGCCGGGAGGTGTGT
TGGAAGACTTATCTGATGACCTTATTGCCATTGTTATTGAAGGTGGAGCT
CACCATCTTGATTTAAGGTAAAGTAAAAATATTATATGTTTTATCCTACT
CACCTTGATAATTTTGTTGAGGAATATCAAAACCATTGACAGAATTAACA
ATTGACAAGTTTTTAAAGAACTGTAAATTTTAATTCTCTTAAGACCACTG
ATATATAAAACATTAGATAGAGCTACTCTGTATTTCCCAAGCAACGACAT
GGAAAAAAAATAATCAGCCATCTTTGCTGAAAGTAGGTCACAGTAGGTTT
TCTTTGTTGAAACTTTTTGACACTGCAGTGACTTCAAAATTTCAAGGATC
TCGCAAGCTTAATTTTGACGTCACCTCATCGTCCAAGATAGCGAATTATT
TTGCTTCAAATAGGGTAGGAAAAGCTCTATTTAGTGTTTTAAATAAGATA
TTTATACTAAAGACCAATCAAATTACAGGTGAATTTTCTTGAAATTAGCA
CAAATTTACTACAGGCCCTTTGGGTGTATTTTTTGGAGGACATTTTAATT
TTTAAATCAACATAACATTTTCTTACAGAGAAGCAAATGATGCTGATCCA
CAATCTGTGATTGATGCTCGTGAAAAAATCGCAACCATCCTCCAAAATTG
GATGGAGCACCCTGAAAAGAAATGAACGAACACGGAATGATCAATTGTCA
TCAGTCATTTCTTAGTTTTAATTTATCATGGGGAATCATGGCTTAGCTCT
AATCTAGAAGGCGGCTTTCTACCCTACCTAGCCTACTTGCAAAAGTGGCC
AGAAAGTTATTGCATTGACATTAGATGATCAACCAACTTTCTGCCCACTT
CATTCACAAGTAAGATTGGCAGGACTGAAAGTGGGCTGTCTAAACCAGAG
TTATAGCAATTTCTTTGTTGATCAGACACACAAGCAAGTCTTCAGAGTTT
TAAGATATACAAGAAGTAAAGATTAAAGCATAGAGGTCCTGATTCCCAAT
GATTCATTTTGACTATAAAGACCTATGACTTGCTAATGAATTGGATACTA
GGAGCTAAAAACAAAAAATGACAACTTTTATAGCCTATTATTGATTGAAA
TTGTTTTTGTTTAAATTGTTTTTGTTAAAATTTCCTTTAAATCTTGACAA
CTTTGATTTTAAGATTTTCGTTTATGTCTAAAATTTAACATTAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_033981XLOC_033981Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053850-exon-scaffold_234-1575043694:438754..439651TCONS_00053850-exon-scaffold_234-1575043694:438754..439651Clytia hemisphaericaexon
TCONS_00053850-exon-scaffold_234-1575043694:435104..435147TCONS_00053850-exon-scaffold_234-1575043694:435104..435147Clytia hemisphaericaexon
TCONS_00053850-exon-scaffold_234-1575043694:434646..434782TCONS_00053850-exon-scaffold_234-1575043694:434646..434782Clytia hemisphaericaexon
TCONS_00053850-exon-scaffold_234-1575043694:434138..434301TCONS_00053850-exon-scaffold_234-1575043694:434138..434301Clytia hemisphaericaexon
TCONS_00053850-exon-scaffold_234-1575043694:433735..433870TCONS_00053850-exon-scaffold_234-1575043694:433735..433870Clytia hemisphaericaexon
TCONS_00053850-exon-scaffold_234-1575043694:433139..433454TCONS_00053850-exon-scaffold_234-1575043694:433139..433454Clytia hemisphaericaexon
TCONS_00053850-exon-scaffold_234-1575043694:432219..432331TCONS_00053850-exon-scaffold_234-1575043694:432219..432331Clytia hemisphaericaexon
TCONS_00053850-exon-scaffold_234-1575043694:431435..431736TCONS_00053850-exon-scaffold_234-1575043694:431435..431736Clytia hemisphaericaexon
TCONS_00053850-exon-scaffold_234-1575043694:430308..430923TCONS_00053850-exon-scaffold_234-1575043694:430308..430923Clytia hemisphaericaexon
TCONS_00053850-exon-scaffold_234-1510915933:438754..439651TCONS_00053850-exon-scaffold_234-1510915933:438754..439651Clytia hemisphaericaexon
TCONS_00053850-exon-scaffold_234-1510915933:435104..435147TCONS_00053850-exon-scaffold_234-1510915933:435104..435147Clytia hemisphaericaexon
TCONS_00053850-exon-scaffold_234-1510915933:434646..434782TCONS_00053850-exon-scaffold_234-1510915933:434646..434782Clytia hemisphaericaexon
TCONS_00053850-exon-scaffold_234-1510915933:434138..434301TCONS_00053850-exon-scaffold_234-1510915933:434138..434301Clytia hemisphaericaexon
TCONS_00053850-exon-scaffold_234-1510915933:433735..433870TCONS_00053850-exon-scaffold_234-1510915933:433735..433870Clytia hemisphaericaexon
TCONS_00053850-exon-scaffold_234-1510915933:433139..433454TCONS_00053850-exon-scaffold_234-1510915933:433139..433454Clytia hemisphaericaexon
TCONS_00053850-exon-scaffold_234-1510915933:432219..432331TCONS_00053850-exon-scaffold_234-1510915933:432219..432331Clytia hemisphaericaexon
TCONS_00053850-exon-scaffold_234-1510915933:431435..431736TCONS_00053850-exon-scaffold_234-1510915933:431435..431736Clytia hemisphaericaexon
TCONS_00053850-exon-scaffold_234-1510915933:430308..430923TCONS_00053850-exon-scaffold_234-1510915933:430308..430923Clytia hemisphaericaexon
TCONS_00053850-exon-scaffold_234-1491911889:438754..439651TCONS_00053850-exon-scaffold_234-1491911889:438754..439651Clytia hemisphaericaexon
TCONS_00053850-exon-scaffold_234-1491911889:435104..435147TCONS_00053850-exon-scaffold_234-1491911889:435104..435147Clytia hemisphaericaexon
TCONS_00053850-exon-scaffold_234-1491911889:434646..434782TCONS_00053850-exon-scaffold_234-1491911889:434646..434782Clytia hemisphaericaexon
TCONS_00053850-exon-scaffold_234-1491911889:434138..434301TCONS_00053850-exon-scaffold_234-1491911889:434138..434301Clytia hemisphaericaexon
TCONS_00053850-exon-scaffold_234-1491911889:433735..433870TCONS_00053850-exon-scaffold_234-1491911889:433735..433870Clytia hemisphaericaexon
TCONS_00053850-exon-scaffold_234-1491911889:433139..433454TCONS_00053850-exon-scaffold_234-1491911889:433139..433454Clytia hemisphaericaexon
TCONS_00053850-exon-scaffold_234-1491911889:432219..432331TCONS_00053850-exon-scaffold_234-1491911889:432219..432331Clytia hemisphaericaexon
TCONS_00053850-exon-scaffold_234-1491911889:431435..431736TCONS_00053850-exon-scaffold_234-1491911889:431435..431736Clytia hemisphaericaexon
TCONS_00053850-exon-scaffold_234-1491911889:430308..430923TCONS_00053850-exon-scaffold_234-1491911889:430308..430923Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_234supercontigscaffold_234:430308..439651 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.609411	0.401602	3.30753e-07	0	2.00216	1.82789	1.55172e-07	0.879119	3.94468e-08	0.187782	0.18223	0.000915784	0	0.502374	0.396044	1.81633e-05	0.469298	0.0384661	0.150446	0.477421	0	0.569379	0.554175	2.82078	0.773383	0.995249	0	0	0	0.501766
Blast
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BLAST of TCONS_00053850 vs. Swiss-Prot (Human)
Match: DPP2 (Dipeptidyl peptidase 2 OS=Homo sapiens GN=DPP7 PE=1 SV=3)

HSP 1 Score: 391.349 bits (1004), Expect = 3.058e-125
Identity = 202/453 (44.59%), Postives = 283/453 (62.47%), Query Frame = 3 
Query:  858 QKFCLLLMLHHYYSAGPNGRYQQRYLISDAYF-DGKGPILFYTGNEGDITNFWDNTGFVFALAKRFKGLILFGEHRYYGKSLPFGDQSFKGDNIGFLTTEQALADFAYLVKQVKKDHSAQNNTVFAFGGSYGGMLTAYMRYKYPDIIDGGVASSAPFMTVAGNRPRSEFWEAVTNTFHKADSTCPTSVQQGFSALIKLFDSGDVGKQVIQSTFNLCPEQMKNPNLKNNVLLWARNAFTLLAMVDYPYPADFMAKLPGHPVNVAC-SYIKGANKLSGLANITSLLYGPDAK--CHDTFTEYVYCADPTGCGTGPDAPPWDYQACTELALPGSSTNETDMFPPLQFTLEMRQHYCAGKFGLGMSRNDWYGTHYFGTLDEIKHASRLIFPNGDLDPWMPGGVLEDLSDDLIAIVIEGGAHHLDLREANDADPQSVIDAREKIATILQNWMEHPEKK 2204
            ++F    + H  +    N  + QR+L+SD ++  G+GPI FYTGNEGD+  F +N+ FV  LA     L++F EHRYYGKSLPFG QS +  +   LT EQALADFA L++ +++D  AQ+    AFGGSYGGML+AY+R KYP ++ G +A+SAP + VAG    ++F+  VT  F      C   V++ F  +  LF  G      ++  F  C       +L   + ++ARNAFT+LAM+DYPYP DF+  LP +PV V C   +  A +++GL  +  L+Y       C+D +  Y  CADPTGCGTGPDA  WDYQACTE+ L  +S N TDMFP L FT E+RQ YC   +G+   R DW  T ++G   +++ AS +IF NG+LDPW  GG+  +LS  +IA+ I+GGAHHLDLR ++  DP SV++AR+  ATI+  W++   ++
Sbjct:   33 ERFFQQRLDHFNFERFGNKTFPQRFLVSDRFWVRGEGPIFFYTGNEGDVWAFANNSAFVAELAAERGALLVFAEHRYYGKSLPFGAQSTQRGHTELLTVEQALADFAELLRALRRDLGAQDAPAIAFGGSYGGMLSAYLRMKYPHLVAGALAASAPVLAVAGLGDSNQFFRDVTADFEGQSPKCTQGVREAFRQIKDLFLQG--AYDTVRWEFGTCQPLSDEKDL-TQLFMFARNAFTVLAMMDYPYPTDFLGPLPANPVKVGCDRLLSEAQRITGLRALAGLVYNASGSEHCYDIYRLYHSCADPTGCGTGPDARAWDYQACTEINLTFASNNVTDMFPDLPFTDELRQRYCLDTWGV-WPRPDWLLTSFWG--GDLRAASNIIFSNGNLDPWAGGGIRRNLSASVIAVTIQGGAHHLDLRASHPEDPASVVEARKLEATIIGEWVKAARRE 479
The following BLAST results are available for this feature:
BLAST of TCONS_00053850 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
DPP23.058e-12544.59Dipeptidyl peptidase 2 OS=Homo sapiens GN=DPP7 PE=... [more]
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