TCONS_00053920 (transcript) - C. hemisphaerica

Overview
NameTCONS_00053920
Unique NameTCONS_00053920
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length765

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00053920 ID=TCONS_00053920|Name=TCONS_00053920|organism=Clytia hemisphaerica|type=transcript|length=765bp
ATCCAGaccacagacagacagacattcaaCCTACCAACGAAAACATATAT
ATAAAAGGATATAAAAGGATAAAAGTCTCATCTGCTACAGTGAAATGGCT
GCTCCTGGATATAtctcaaaaagtgttttttcaccaaatttgcCATTGAG
ATTTTCTGCCAACTTAAGTTTTCTGTTCAGTCAAATTGAAGATCCTGGGC
AAAGATACAATCTTGCAAAGCAAGCAGGATTCACTTCTGTTGAATGGGGA
AATGACATTTACCAATATCCAATTCACGATTTGGTTGAAATCAATAAAGA
TAATCATTTTGAGCATGTTCTCATCAATATGTTTACAGGAAAAACCAAGG
GCCTTGCATGCGTACCTGGAAGGTCAGAAGAATTCAAACAATGTCTTGAA
TTATCAATAGAATATTGTAAAAATCTAAAGTGTAAAAGatTACACATATT
GGCTGGCCAATACTCTGAAGATACTGATATAACtcaagaaacaaagaaaa
cttACCACGATACCTTCATTAATAATGTGACCTTTGCATCAGAACGGCTT
GCCTTGGAAAATATGACCATTCTTTTAGAACCAATATCAACCATTGATCG
ATATTTCATGGAAAGCGCTGATCAAGctgTGGATATTATCAAAGAGTTAA
AATGCCAAAATGTCAAATTGCAGCTCGACCTCTTTCATCAACAAAGAACA
CGAGGAAGTTTGACAGAAACAATTACAAAATACTTGGATCATATTGGACA
CATTCAAATCAGTCA
Run BLAST on NCBI

transcript from alignment at scaffold_237:418..20100+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00053920 ID=TCONS_00053920|Name=TCONS_00053920|organism=Clytia hemisphaerica|type=transcript|length=19683bp|location=Sequence derived from alignment at scaffold_237:418..20100+ (Clytia hemisphaerica)
ATCCAGaccacagacagacagacattcaaCCTACCAACGAAAACATATAT
ATAAAAGGATATAAAAGGATAAAAGGTATTATCAAcggatttttaatttc
tttctttagtTTTGTCTTTTTATATCTTTCAATCAATAATTTCATTCTCA
GTTTTTGCTGTGTCTTAAGGCGCTGTGCTGTACCCTACGCAAATGCACGT
GTGGTATGTGATAAATTtataggttggtttggaaatcgttttattttgaa
atgtaatcttcactttagatgaatacttttatttattggGATTcctgaaa
ggttcaaggtttgtttactttttatttcaaattatttcattgatttatta
aGCTGCAATGGgctatttcatttttaaaccagacccccgcgctcgatagg
atcgatcatcggaacggctcgatgacggatcgatatgtgtttcgataagt
aatccatcgatccggataggagatcgatagaggatcgatactcaagattt
ttttaagcttatgattagttatcgatctatcatcgatctattatcgatct
atcatcgatcttttatcgatcttatcgaccctatcgactctttctaaaaa
tcgagctctaatattaatcgatctttctcgctatcgattacctatcgaca
catatcgattacctatcgacacctatcgattacctatcgacacctctatc
gatccaatcaaaatatcgaccgtttttttatattgattaatCGATCCATA
TCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNactcgattaacgatcgatgacgaatcga
ttaacgatcggtgacgaatcgattaacgatcgatgacgaatcgattaacg
atcgatgacgaatcgattaaccatcgatgacgaatcgatgacgaatcgat
taacgatcgatggcgaatcgatatactcgattgaaatactagctcgataa
tggatcaacgaaggatcgatactcaagactttttatggctgaatcttcca
tcgatctcctatccggatcgataagtaatccatcgatcacatatcgatcc
gtcatcgagccgttccgatgatcgatcctatcgagcgcgggggtctggtt
taaatcatacaggggtattgacgaacttttccagggggggctgagccttg
attttccaaggggcttttggtaattttcagattttccaagggggttatta
aaggtttccagggggttctctcCTCCTAAACTGGCATCGATAGTCACTTT
CCAGgccttttttcacaaaatttcactttccaagGGTGTCGTTGACtcct
aatttccaggggatagtttgaaaaaagtgaaaaaagttcgtcaatacccc
tgtacaattttttttggaatagcccaatagcTGACAAAGATTTTTGACAG
TTATCAgtgtgggcttggccgccattttgaatttcgatttttttctcctg
tactcggcaatttagaggttgttcgtaatacgcaaTTTGGCTTACACGTA
ACACTTGTGGGTATCACGAAACGCCCGTTAGAAAAGTGCTCACCGGACAG
TCTGGTGTACTTCAGTGCGCACTTTTAAATATTACTTAAAAAATTACCGG
ACACAGGAAAAACAACACCAGAATGTCCAGTGAATCGGCAGGGTcgtgca
tcagtggaggcaaacatgcatggccctcaaatgaatgacctgtctggtca
ttaaaatacaacttcacagctccactcgcagctctactctaccatttttg
ttttgatttaactttgtattttaatgaccagacaggtctttcatttgagg
gctatgtatgttagcctccactgatgcaatttacctgatctcacggtagT
ACACCGTGAAGactgaagtcgggtaacttgcatcagtggaggcaaacatg
catagccatcaaatgactgaccaatcaaagcaacaaaatttcaaaacaaa
tgaactacgcagctccgctcgcagctctactctatcatttttgtttttat
ttaagtttgtatttttACCAAActagacaggtcattcatttgagggctat
gcatgtttgcctccactgatgcaagttacccgacttcatggtatacatgt
tttttttataagcataacgtttataagcataccaagacctgaatttgtct
aaaaaataaacatattacaagcatattaATTAAGTGAGCTTGCTTTTGAG
GTATGtaagtgaaaattttaatttaaaaaaatacaagcTAAACGCGGCAA
TCGTTCACAACTCTCCTGAACAATCTTTGTATCATTACTTATTTCCCTAT
CCTCATGTATActttaattgtaaaaattttagcgagactaattttagcgt
atattagcgagtcaggaaaatcttgagtttttattggatttattttagcg
aatcacgatttcaaaaaatttcgcgtggataaattttagcgaatatttGT
ATTaaattattgactgaattcgttttctatcatttctttgcactgaaacc
cttcttattgataaaaatttatcaagtcaatataaccagaaattttgcGC
GGATaaaatttagcgatctgtcgattcggcgtgttttagcaagatttatt
ttggtgaaaatagggtaaactcgctaaaacgctaaaattagtctcgctaa
aatttctaccatTAAAGTAGCAAcgacagattttggaaaaattggagacT
CAAATCTTtcggaaaaataagcatatgataaacatacttcgagcctgagt
ctaaaatatctctaagcataactgagcttgttttccaaaaaacatatgct
tataaaaaaacaacatgtagTAGTGgtgtcattgaccttggttgctgcac
aggtgACTGAGGTTCAATttccactcgcagcggttcactttgcccgggtc
aacccatgccatgtgaggggaattggatagtcagtccaaggtgctgacgg
ggcgctcattgaaagcgtatatagttgcgaaaataggcctcacaaagcct
cctgcaactcaaccaaatagaaatagaaataagtgaacaaaaaagtaaaa
tcaacacagTTTGTTACGATATTTCGTTCTATTTTCAGAACTTTATCAGG
TATGATACTGCACAAGCGTTAACACATTTTTAAATGCTACAAAATCAGTG
ATGCGTAAATCAAaagcaagaaataaaaaaatctacagtatgtggccccc
aaaacggcgataaAATTTGAANtcgagaaataaaaaaatctaatgaacaa
aggaaaaaattctATAGGgaatgaaacaaagaaaatgttaaaaagattta
ataaaAATAGGTGTGTAGCGATAATATTTACAACGTTAAAACAGTAcaat
aaaattgatgaaaaaaaaaaacccgtggggaATAATcgtcaaaaacaata
aaactgaaaatcaaacgAAAAAGGTTTCAAATTAGCACAGTAAACGCAGT
GGAAATTAAAACGGAAAATTAAATGCTCATGTCCCCAAGTCAATTACCTG
GAAGCgaaataaatatttcataatttgttTTATCACACGAGCCTTTCACT
AGTTAGATCTCGATAAAGCGAACAgggaatataattttgtttgaattaaa
CATCCCTTTATCacagaaacaaagaaaaatttacttGAATTTCAAACTAC
CatcatccactaaatatttgagacaaaggagATTTCCCGGCGAAATTTCA
Aataacaccacaaatgatttttaagcgggttaaactacagttggaaagta
gagttttaactctgagttaggacttaggaccttaggatctcaggatttaa
aagctcaaatttgctcaaatgaggcatggaatatagcctagaagccatca
aacccctctaaaatcaaagtgttcaatggaagaaagtcgaagtgctaaaa
tagcaattcttgcccgaactttaaattctgaaaaacgttaaaatacacta
aaatctcaatatatttcgagggtGACTGTAGcgacaatagaatttcaaac
cTCACTTGTCTAAAGCAGGAAGTTCTCTTTTGGACTCATCGCNTATGTTA
GTGTCATCCCCCTCCCACCCCGGGCTGAAAAATTCTACcagatctgtgag
aaggggtgttacATTTGCTTGATTCCAAATTCTTTTTAGGTGTGATCAAA
GTTTCAGCCTGATTTGTAATTGGATGAAAATTTGCGTGactcattttatg
ttttttatatttaaaaaataNCTGTAGcgacaatagaatttcaaaccTCA
CTTGTCTACAGCAGGAAGTTCTCTTTTGGACTCATCGCGTCCAGCACATC
AATTTATCCCTACTGATAGTCAATTTTCGACTTGTCACTGAAACAGGAGT
GTGCTGTATGTAATTCGTAATTAAAGGaagttttgaattgaaaagggTTA
AAGTATCTAGCGGTGAATCAAATCCCAACCATTCTTTGCATAACTCTGAA
TTATAATACACTCAAAAAATGTAATCTTAATTCTTATTACTTGGACAaat
gtttcttgatttttgttaCTGTATGATGGCAATTCGTTACGAAAAAAAAT
GCCCTCGGAAGTTAGAAGTGATTAGGGCTTCTGTTTTTTACCTacattac
acccccttctcaccaaNATTTAATCTCTTTTTTCAGCATGATATTACaat
atttagatttaaaaaaattgagacaGTGCTTGTAAGTACAAATTactggt
ttgagaaaaaaaaaaaattggtggtTAGAAGTTTTATATCATGTAAAGTT
ATCAAGGTAAAGTACTAACATTGTAGGATTCATTATCTCCCAGTTTGAAT
ATTTCGATNTTAATTTTTGTCtccgttgaaaataatcaaataaaaaaatc
cttgCTTAAActtttgtgctatttttctctatccccactgaattttctga
caaatatatattttctgggAATGTTAAAAATGTCTGTAAGggcaaaatat
tcattcaaaatcATCATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNGAGCCGATCTATCAATTTGTACGTATTTTTCCCTCCGACATTAAGT
GTCGTAACAAACTATACACTCTTATCTTTTTCCTTAGAAAGACAAATCAT
TGAAGCACCAAGGCAAGAAGCATAGTCATGAGTCAAACGTTCTCGTTTGA
AGATAGAGTAAAGAGtataaagagaatttttttaaagacaatcTGAAGAT
ACGTTTCAGCAAGATGAGATACGAGCACTGCAAAAAATTTGTCTCGCAAA
TGAACTTAATACAGACTTGAGCAGTATTTCGGCTGTTATTTTCTTAGTAT
GATTGAACCCCCGGTGGGGGGATGTACTTCGGCAAAAATATGGGCGCTGG
GTATGACGCGTGCCTTAAGGGCTGGGtcaccctcccaaagtctctctaag
gtttACCAAGATCACGGCTTTGGGGGATCTCTTTTTTGTGACACTGTAAT
GTCTTCTTTCGAGAGTAGAAAATGTTGCAAGTGCTTGTCAATAAattaat
ttcgcaaattttcaaggaagaaagaaaagaaacctAATAAGTTTACCTAA
TTTAGTTAGGTATAAAGAGAAggagattttttggcctttgaTTTTAATGG
TCGAGCAacttcgaaacttataaaattagttttgttgatatttttaccTA
GCTGTTTCCTTTTACCCCTCTGATTAATAAATATGTATTTTAAACGTTCT
CTTTAATAAAACCCTCTTTATTCCAGTTTATATTTGGGCTGAAACTTTGA
AGAAACTAGTGTAAGTCGGGTGTAAGTTAAGTTAATTATATACAtaaaag
gctttaaaaaaaactgaaaaaagaaagttttaaaaaatttgcaagCGATA
CATACATCTCTTGATTGACTCCCTCCCTCACGTATGCTTTTTGAAGAACC
CTTTTTATTACGTATCGAAGTAATTAATTAGGAGATTCCAACCTGTTCTT
ACTTCTACCGACAAAGCTTTCCgcgatatttttatccccaaccAAAACTT
GCATTTCATTCCATTGTTAACCTCCCACGCCCTTTTTGCACTCTTACAGT
atataatttcatcaaaatgggGTGAAATGAGTGGTTCTCCCTCTGGGTAG
AAACACTTATTTCCAAAACtactaaagtaaaaatttttgaatgttctaaG
GTGAGCCACTTTTTCCCGTCGAAGCTTTGGCCTAGGCTTCTATTATTCTC
AAACGAAAAAAGCTTCTTacaggaagtatatctatagggTCTATGAATCA
GCTATTGTTTTTCCTCCAGTAGAGTAAGGGACTTGCGAAAAGGTACTATG
tagaatttttcttatttaataCTAACTGTTATTTATTTGCAAACTTTCTG
TTTTATaagcttttttgtttgttttaagaCAACCAaatactactttaggc
gtacagacTCGCAGACTTTCACgggtagaaactttcgcgattttcacgAA
TTCTATTTTANAGGGACTTGCGAAAAGGTACTATGtagaatttttcttat
ttaatactaaagtctgtctcgaaataatttgcagctggagaaaaaaatgg
ctgtaacttttgatagaattccaatcaagttgcgattttgtgctcgttaa
aaagNtgtctttgaaaattcttgacaaaataaaaaaatctgtaaaacgtc
taacttaaaataaaatttaagatttatggcactttttagcctgttaaAGT
CTCATAAGTCAAAAGACATAAGTTTCAATCCAGTTCTAGAAGTATACGCT
CGCAAAAGTAAATGTTGTAAATTTTCGTGATTCTTCGATCTCGCGAAACT
TTGCACGCCTCAACAAGTACGCAAGCACTCAACAAGTACGCAAGTACTCA
ATTTCAATCCTTCATTTTCGACAATAAAACTGGAAATCAGAGAAAGATAG
TGAAGCACGTTTCTAAGAGCGTGGGAAATTTATATCACGTAATAAACAtt
ggaatgtcttctttttcttttaaatgttgcaaaaaaggagaaaaaaatgt
tgcaaaaaaggagaaaaaaatgttgctcAGTGGCGGCTTATTTGATCTTC
ATAAATGACACTGCattatcttctttttctttgcaaaGAGCAGAACTGGG
GATGAGCGCAATGAAATACGCTAGAAAGTAAATTTCAATAAATGATGAGT
TTGACATGGGCAAATGtatcaaattcaaataaaaaatgataatcaaGCAT
CATCTGATTATGATCATTTCTCCCCAACATGTTGCTAAATAGAGAAACCT
TCGATTTGTAACATTTCAATCTCCAAGagaaaaggagtgagcctatAAAA
GtcattttccactaaataaagACAAAGTACTGAGACATGTAAAAAAGGAa
acatttctttctttaaaactttatttataAGTAGATACCAGTATTGGACT
CGCCCATGGTGATGACGATCTTTAATATGTTCGAGACGGGAGTTATTAAA
GTCAGTGCTTATTtaggaaaatcaaatttaagaaaTCTTTGGGCCTTTTT
ATCGATTATCTTTCCAAGATTCGAACTCGTATGTCGTATActccattttg
tttttgagatACTGCCCATAATGGTTAAGCTTAAATACTGCTGTGGTGAA
GTGTCTATCTTGATTTGAAAATTATCACTCGATTTGTCTTAAGGTAATTT
TGAACAATATCTTTGACCTGCCGTAAGTAATTAACGATTTAGACCTTTAC
AAAtgtaaaaaacaaattcaattgCCTATTctatagtatagtatagtaaG
TATAGATtaataaaatatcgaaatatgcGTAGTGGGAACTGATAATTTAT
ACAATCTTTCAGTACTTACTTTAAAATCTATACTTTCGATAGACCTAACA
AGTTCTTTTTGATACCAAAAATTTGTACTCGTAATGACTGCCTCGAATTT
ATAaagttcttttatttatttcataaatcttcactgaaaaagaaagcaaa
taCATATTATAAAAAGCCTCTTCTGATCAGAATGGTATTGGGAGAGGTAT
ACTCGCTTCCCTTTTTACACCTTCCAACCAAGGGCCAGATCTAAAGTAAA
GAGTTGTTAAATTTAAAGACTTATGGATTGAACTGAGATTGAACTATACA
AGTAAACTTTAGTAAGTAATAATGTTGGAAAGCATCCACCGAGAGGGCCC
TTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACAG
TATTTGATGTCTCACGTCTTGGTTTGGCTAAGTCGTTACTTTGTATGGCA
TTTTTGCATAAAGTTTCCACatgataattattttcattactgGATTTTAA
ATTCAATGACATTTTCGAATTTACTTTGTAAACATAACGAACACTTTAAT
AACATAGTCTACCTTTTTCTGACATTCTTCACGaacagattttattttat
ttgcgtGACCCTATTCGAAAAATGCACACATTCGTCATAACGCTTAGACA
TTCGTTTTATTAAGAGGCAAAGCGTTCGTCATGAACGCTTAAACTTTCGT
TTAAAAGCAAAGCGTTCGTCACGAACGCTTAAACTTTCGTTTAAAAGCAA
AGCGTTCGTCGTGAACGCTTAGACATTCGTCGTGAACGCTTAGACATTCG
TCGTGAACGCTTAGGTATTCGTTATAAATCATAAAGCATTCGTGACAAAC
GCCTCCCTGTTAAAGCGTTCGTCACAAATGAGTCGAAATCTAGAAAGCGT
TTTTGACGAACGCTTTAAAAGAAAGTCGCTCGAAAAGCATTCGTGACGAA
CGGATAGACCGTTCGTGACGAATGACTGACCATTCGTGTGTCCACGACGA
ATGCTTTTCGTTCCAGTAGTGGTTTATTCAGgacaaaaagcaaaacaaaa
agaaattacgGAACAAAACATGGGAACACCTGATACTAGTAGAGCACACA
ACTGTGCTGTAGGCATGCCCGTAGGTCATACCAAGCAGTCCAAAGAAGGG
CGTTCTCCCAAAAACGACCGGTCATAACCAAATGAACGCAGTATTAGCTC
AATACTAGCATCAGTTATCCCCAGAAAACTAAGGAGTTCAAAAAATGGCC
TAACCCGGAACAACAACTTCACGAGCGTTCAACCTGTGAGGAAGGAACGT
ATTAAGTTTATATTGCCAAAAACATACCATATAGAAATATATGGTGTGCT
GAAGcgccaataaatactatctttgttgaaaacatactatctttttaaaa
cctactatctttttgaaacaatactatctttttttaaacataccgtcaac
tgctctaacttgggactatctgacaaaacatgggacagcaattcggccac
catttaccaaacttccaaagtcatttgatttgagttaatgaacggggtat
taaaaaatacacgatttctatTTTacactgagtaggcttttaaatcgaaa
tatgaaaaaactcCGTAGTGGAACATATGCAAGTGTCTGGAATGAAGAAG
AATAAATTAGTAGCAAaatgatggagcgtttgaccTCACTCACGCGACAA
GTTGcacacttgttatttgttaatcccatcgggtgataggcggttaggcg
gcggtCGTTATCTAATTCTCTGATTAGCgtttaggctgcacgcatcccct
ctgatatgatttgatataggggatgcgtatcgtctaaGATATTCCTGTCC
CagcttacccccgtcttttcttttctctttNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNcgtcttttcttttctcttttttgattATGT
GTCACAGCTGTACAACGacttctctttttctttgtttaatgaatgaaaat
ttataattatgaAAGCAATAagacaatgacgtcatttttctctttctgtg
ATTGGGTGTAgcaaaattatgtaaatttataCAACTTtcggttaccccaa
atttgaggtaactctcggacgagaatttcatacacgatacgcatccccta
taacaaaataaattctggggatgcgtgcagcctaattAGCGTTTGGTCAT
tgttaataaaaacaaagagttaaaaagcgctatcagtaaaagttatcgtg
acatgttatgacagaaagtatgattgataaacttggtggagttatcaaaa
caaatttgttgtcaaagagatttgagagtaagtgaaaatacaggccagaa
tatcaacagtcccatttTTTGACCAATTGTCCCAATTTAGAGCAGTTAAC
GGTATTATTActatactatcttttttttaaacatactatctttttaaaac
aatactatcttttttaaaaacatactatatcttcgtttaaaaacatacta
tttcgtttaaaaagaaactatcatatTTAAACCAAAACTATCTAAGTATC
TAATCCAATcttagggagaccaggctgtaaaccagaacataaaatatcaa
aaactaaactgtgaaatagtttacagcctggatatccaggctactatCTA
AGTTTAACCGATACTTGGatccaaaatcgaaatcgaaacttAACTTCTAA
GGCCGAGTTACGGTTGTCGAGTTATAGATCAACTAATTTGACTGATAATA
AAAAATTCTGAGctaaaaatttttcttgtctTGCTTATCTGATTTCCAGC
AACTTGTTTCTCGTCAATGATTTTGATTGGCCTTCCCCTCCTCGTTGACA
AAATAGCGACAAAATAACATTCAATAAATGTTCTTTTCTGTACTGTACAG
TAGTCCACTGATATACTTATACATAAGTTACATGCTTATCAAATCCAATC
TTAGCAGCTAGTAAATAAGGAAGGAACTTTTGAGGcagaaattttctaaa
aaaataaggaactccagtcTAGGAGCCAAGTTAAGTTAAGGttcctttat
aaaaaaaacaagtatcTCTAAGCCTTGTTGAAAATATTATGATATATGAT
TCATATTTTCTTCTTTACAGTCTCATCTGCTACAGTGAAATGGCTGCTCC
TGGATATAtctcaaaaagtgttttttcaccaaatttgcCATTGAGATTTT
CTGCCAACTTAAGTTTTCTGTTCAGTCAAATTGAAGATCCTGGGCAAAGA
TACAATCTTGCAAAGCAAGCAGGTAATAATTGTAAAATGTAACAAACTTA
TAAATAGCTTATatgatttcaaaaagaattgtcatgattatttgaaaatt
attcaaaCNTTCAAAAAGATTTGTCATgattatttgaaaattattcaaaC
TTCTTTATTTAGGGTATATActtttgctatattttcttttttttaaatct
ttttacaGGATTCACTTCTGTTGAATGGGGAAATGACATTTACCAATATC
CAATTCACGATTTGGTTGAAATCAATAAAGATAATCATTTTGAGCATGTT
CTCATCAATATGTTTACAGGTTTGATGTCATTATTGAAATAATCCTGATA
ACTTTACAACTTTCACATAACTGAAATGTTCAAATAACCTGGAAAACCTt
aagtttattaatttttgttgtGTACTTATTTAGCCGTTGGCCAAAATGCA
ATCTTTGGGGAAAATTCAATTTGGTGAGTGGGGAGATTTTAGGCATTTGT
AAATCAAAGATTACTTGgtattttaatagtttttacttaaaaatgctgat
tttagATAGAATTTCTATTCTAAAAAGGTTTTGTTTAATTTGTCACCAAA
AAATGCCAAACCTACTAACACTAAAGGTTTTAGTTTTTCTTATTGTCCAG
GTATTAATCTTCCAAAGAGTTTTCTTTTACATGAATATGGTTGTTCCTAT
TATTGTACAAGAATTGTTACATAAAGATATGATGGTAATATCAGGTATAT
ATAATGCTGATAAAGGAAACTTGAACATGATATATAGCAATAACATTTTC
ATTATCTTTTCAGGAAAAACCAAGGGCCTTGCATGCGTACCTGGAAGGTC
AGAAGAATTCAAACAATGTCTTGAATTATCAATAGAATATTGTAAAAATC
TAAAGTGTAAAAGGTATAATTGAATCTTGTGAGATGAATTCCTTGGGACA
TAATAATTTAAAAGCTCTCTCTGCTTTGATGATGAGAATACCATGGTGTA
GGCTCATGCGATTTCCTCAAGTGTAGGCTTCATTAACTATATAAAGTTGT
AATTAGGTTGTCTTGTATTAGCCTAGTAGCTATTTGTTTTTATGTCAACA
ATtaatgaataaacaaaaaacttttttttcttagatTACACATATTGGCT
GGCCAATACTCTGAAGATACTGATATAACtcaagaaacaaagaaaacttA
CCACGATACCTTCATTAATAATGTGACCTTTGCATCAGAACGGCTTGCCT
TGGTAAATACTTTAGCTTTGGTTTCGGAAATTTTCAGACCACCACTAGTC
CATTCGCGTCGCTTTATGTTTTTCGTTTATAGAAAACTCAAATGATTAAA
GGCTAATTTCTTTTTAAGATGTTTGATGTCAAATACATTTACCTTTAAag
ggcttttccaaaaaaaaattttgatcttATACTTTCCTGTCAGTCCTGGG
GAAGGTACTAGGATTGCAAGTTGACAGGGGTTGCTGCCTGAAACTTTTGG
GTcttgttttggtttgattttcagatttttacaactcttagtgggacttt
ggaagaccaaaaaaggtaccctaaagGGTGACACATAcctgtaccctcca
tttgcccaAGTAGCCTCCCTCCACTAAGTGTCAGTCAAAGTCAAACTTAA
ACATTCAttgcaaaataaaaattgattttgtttatAATCAATAATAAGGT
ATGAAAATGATATTCAACCTGTAAAAAGATTTGGTCAGACCAAAGAAGCa
acaaattactgaattttcaTGTTTCAGGAAAATATGACCATTCTTTTAGA
ACCAATATCAACCATTGATCGATATTTCATGGAAAGCGCTGATCAAGGTT
AGTCAGGTCTTCAGGTCTTTGCTGTAAAATGGACATGCTTCAGATCATTG
TACACAATTTTAGACGAACAAtgaatgaggctcaaaatcactaaaaaata
agaacaatttgagaacAATGCTGAACCTGGAATTACttaatttcaatcaa
tttagggaTCAAAGTAGTAATAATTGGGTATAACGTCCTGAAAACCTCAA
TTTCACCCTATACATAAGAACAGGATAGAagcaatttgaggctcaaagtg
tcaaaaaaagaacaactaagTCTCGTCAAAATTCtactagttcttataaa
gaagtGTTCTTCTAAGACAAGTTAAACAATCAATACATTACTCAGAGTTT
CGTGCTCCAAGCAATCACTGGTATTGAGCACTTTCTTGTAAATATGTTCA
CCAAACAATCGATATTGTTAATGCTATAcattcattttgttttattagca
taacgtttataagcatacttaggctcaatTTCGGTAGAAAgtaagcataa
tgctaagcatacctctaagctgaaatgaaaaaaaatcgtcCAGCTTTTCT
CAAATGCTGACGtttttagggttacttttaaagctgtttcagctttctta
gaccaaagattttcgccTACGGcgccaaattacaaaaaaaattacgttCT
TAGAGCAGAATCAATGTTCTGactaaaaaattcgaaattttcatggaccc
aaagaaaattgacaaatcaaagtctaagcatataaataagcataaactaa
ggctgaaaatgagattttgctaagcatattgagCTATCACCCGaattttc
ccgtatgcttataaaaccaAATGAGCGTACTCATTTAAAATGTCTTTTAC
ACGAAAATTGCATTGAAAGAATGACTAAAACGATGTGATCATTTTTGGTT
TTCAAGGAATTGATTTGATGTCTTTCTAACGGATAGTGGTTTGTTACTCA
AACAATAACTATAACTTTCACTCTTAACCCTCCTGTAGGGAAGTTTGAAG
GCTGATTCCAATTTAATGTAGATgttaattcaaaaaaaaaattatttttt
tggacctaccccggtggaggtcctataaattaacctccgttcgtccgttt
gttcgttcgtttgttcgttcgttaccaacttttctcgagattggctcatt
agttttttctgattttttgcacaaagatatgtagctataaaccctcgaat
gtgacggagcccgattttcgaaaaaaaaattttttgggcaaatttggacc
aaaaaacggctcaaaaatgggttttttggactttgtgaaaaattggatca
ttaattttttcagattttttgcatgaaagtagagtaccatcataggtaaa
agatggctcaagcagattttcgtaaaaaaaaatttgttggctcaaaaaac
gcatgtttatctataagaatcactattaataagcatacataaaaatgttc
ttagtcaaattactcaattttttttatgaggtaGATGTtctttttgctca
tgagggcttacttttgaagaatatgtgtgtttagaaataaaattttggtt
gcCTAGCgtgattttatagaaaaactggccaaattccgatatttttttat
aagcacattatcaattacttaggtattagcttttctcgagattggctctt
tcattgtttatgattttttgcacaaagatgcataactataaaccctcgaa
tttGACGGAGCcctaatttcgaaaaaaaatgtttttgagcaaatttgggc
taaaaaacggctaaaaacaggttttttggacttggttaaaaattgcatca
ttaattttttctgattttttgtatgaaagtagggtaccatcataggtaaa
agatggccaagcagatttttgcaaaaaaagtttgttggctcaaaaaacgc
atgtttatctataagaatcactattaataagcatacatcaatgttcttag
tcaaattactcaattttttttatgagatagatgttccttttgctcatgag
ggcttacttttaaggaatatgtgtgtttagacataaaattttggttgctt
ggtgtgattttatagaaaaactggccaaattcgatatttttttaaagcac
attatcaataacttaggtattagcttttctcgagattggctgttttattc
tttatgattttttgcacaaagatgcataactataaaccctcgaatgtgac
ggagctcgatttttgagaaaaaatatttttggggtagattttagctaaaa
aacggccaaaaaaagagttttttggactttgtgaaatattggatcattga
ttttttgcatgaaattaggtaaaagatggctcaagcagatttttgtaaaa
aaaagaatttttcagctcaaaacacgcatctttatctataagaaccacta
ttaataagcatgaATTAATGCTCTTAGCCAAATTGGTAaattttttggag
atgttttgatatttttttgctcacgaagtcttgaatatgaaagaatattt
caagagcatgaaattttagtttctaaatgttttttttataagaaacaaat
gactaattttaatacATCGTcaatatttgtgttctgaatgattgtttaat
ggtcacgctcacgtagatatcagtTATATaggtgttaaatgcataaccag
gtaggtccataaaagtatcacttgttatttttattattttatttttgttg
tgcTTAAGATTTCACTCATGCTAGGTGCAGCTTGTGCCTCCTATTATTCT
TTAATTTCTAATCtcttgctttttctttttttagctgTGGATATTATCAA
AGAGTTAAAATGCCAAAATGTCAAATTGCAGCTCGTAAGTTAGTTATCTA
CAATAGTTTGGTTTGATTcctatttattttgttatatagGGCGAGactaa
tttaatttgttgttctacgggcccgaccgaccttATTTcagctaaaatca
aaaaaagaataatattgaatttccactaaaatatatttcacacactagtt
atttgtaagaattaaatttgaataaagctgaaaatcaattcaataaattg
aaaatttagaaaatcaagcaagcattccatacactaaaattttattatga
taaaaTTCTTCATCGAAGAttaaaaaagtgaacttttgatccagatattt
tttggaaaatattttcagtaccttaccaaccctgataaatgaaaaattta
ttcttattttaccgaccgaccgacccatatttttctaacaatctgcccgt
agaacaacaaattaaattggtctcgcctagtTGGGGGAGAGGAAAAAATC
ACCCTTGCCCTGGATGTAGCATAGCAACAAAGGTTATATCACAAACTTTG
TAACATTCTTATGTCTTGTTGGATAGCCAATGAGTCCTCATTCGAGTTGA
CTTCTCTGAAAATCTTCGTGTCGTCAGCAGTCTTAAATTCCTCTTTTTTC
TCTGTCAGCCATTTTGAATACCTACAAGTTAGTATTGTCAAAATAACACC
TTAAGTTAATATGATTGGTCCACTAATCTTAGCTAATGGGTGAATGAATT
ACcttaaagagatttttttttgggTCGCGAAAATTAACCCAATTATGAAA
TATGAATCAGacttgtttttaaaacattttccagGACCTCTTTCATCAAC
AAAGAACACGAGGAAGTTTGACAGAAACAATTACAAAATACTTGGATCAT
ATTGGTAGGAATTGTTCGTCATTGGAAGAATTGCCTTATGGGACATTGTC
ATTTAAATGgtacaaaaaatagctgtttttgCACCATCTTTACACCCCTG
ActagttttgaaaattaaagacTCGTAAATGTCTACTAGGCCCTACACTG
ATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNTATGGGTAGTCAAAAAACATTCTCAAATTTAAGTTCTCATGTC
ATCTCATCTGGCAAATTTAatatattttgatgattcttccattttgattt
tgattaacTTGTACCCTAAAGTTTGCTTACACAgcacttttaaataaaaa
taacaattttaccGCATTTcgagaaattctattgtttggTAGCATAAGAT
ACATTTTCATcacaaaaaactttaaaaaggcaaagacaaaaaaatacaTC
TTCTCAAACCATTTTTACAAGTAAATTTaaacgttttgtttttaaataag
agcgatatcgtttgcttactcatcaattttaattcacaagctttttcaca
ttggatgacacgtatgtggagcaaaattggccagaaagaggaaaagaaaa
acataatttgcttatatcagcataatataacaataggcagacactgtcct
gatatgaaatatgtatctgatataaaacgggaacacttatgtaaaaataa
aacctttaaaaaggcAAGGACAAAAAAATACATCTTCTCAAACTATTTTT
ACAAGTAAATTTAACCAAAATTTATATCAAATAAAACTTCactcgttttt
tgtttttattatatgcAAGTGTTTACTCTATATCAGGCTCGccttatgct
tagcattctattattcttaaacaatagagccattgctAAGGTACCCAAAA
CTGAGTTTgtatatatgcttataaacgttatgcttatatagaagaaaaaa
aaaaattttcatcaaatttagtCAAATTTCATATCATATAAAATCTCGTT
TTTGTCACCATAAGTTAAGAgtaatttttaccaaaaaaaaaaaatctcct
tTGATGATTTTCAGGACACATTCAAATCAGTCA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034043XLOC_034043Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00053920-exon-scaffold_237-1491911889:418..492TCONS_00053920-exon-scaffold_237-1491911889:418..492Clytia hemisphaericaexon
TCONS_00053920-exon-scaffold_237-1510915933:418..492TCONS_00053920-exon-scaffold_237-1510915933:418..492Clytia hemisphaericaexon
TCONS_00053920-exon-scaffold_237-1575043694:418..492TCONS_00053920-exon-scaffold_237-1575043694:418..492Clytia hemisphaericaexon
TCONS_00053920-exon-scaffold_237-1491911889:12338..12489TCONS_00053920-exon-scaffold_237-1491911889:12338..12489Clytia hemisphaericaexon
TCONS_00053920-exon-scaffold_237-1510915933:12338..12489TCONS_00053920-exon-scaffold_237-1510915933:12338..12489Clytia hemisphaericaexon
TCONS_00053920-exon-scaffold_237-1575043694:12338..12489TCONS_00053920-exon-scaffold_237-1575043694:12338..12489Clytia hemisphaericaexon
TCONS_00053920-exon-scaffold_237-1491911889:12676..12786TCONS_00053920-exon-scaffold_237-1491911889:12676..12786Clytia hemisphaericaexon
TCONS_00053920-exon-scaffold_237-1510915933:12676..12786TCONS_00053920-exon-scaffold_237-1510915933:12676..12786Clytia hemisphaericaexon
TCONS_00053920-exon-scaffold_237-1575043694:12676..12786TCONS_00053920-exon-scaffold_237-1575043694:12676..12786Clytia hemisphaericaexon
TCONS_00053920-exon-scaffold_237-1491911889:13281..13380TCONS_00053920-exon-scaffold_237-1491911889:13281..13380Clytia hemisphaericaexon
TCONS_00053920-exon-scaffold_237-1510915933:13281..13380TCONS_00053920-exon-scaffold_237-1510915933:13281..13380Clytia hemisphaericaexon
TCONS_00053920-exon-scaffold_237-1575043694:13281..13380TCONS_00053920-exon-scaffold_237-1575043694:13281..13380Clytia hemisphaericaexon
TCONS_00053920-exon-scaffold_237-1491911889:13602..13719TCONS_00053920-exon-scaffold_237-1491911889:13602..13719Clytia hemisphaericaexon
TCONS_00053920-exon-scaffold_237-1510915933:13602..13719TCONS_00053920-exon-scaffold_237-1510915933:13602..13719Clytia hemisphaericaexon
TCONS_00053920-exon-scaffold_237-1575043694:13602..13719TCONS_00053920-exon-scaffold_237-1575043694:13602..13719Clytia hemisphaericaexon
TCONS_00053920-exon-scaffold_237-1491911889:14245..14314TCONS_00053920-exon-scaffold_237-1491911889:14245..14314Clytia hemisphaericaexon
TCONS_00053920-exon-scaffold_237-1510915933:14245..14314TCONS_00053920-exon-scaffold_237-1510915933:14245..14314Clytia hemisphaericaexon
TCONS_00053920-exon-scaffold_237-1575043694:14245..14314TCONS_00053920-exon-scaffold_237-1575043694:14245..14314Clytia hemisphaericaexon
TCONS_00053920-exon-scaffold_237-1491911889:17102..17151TCONS_00053920-exon-scaffold_237-1491911889:17102..17151Clytia hemisphaericaexon
TCONS_00053920-exon-scaffold_237-1510915933:17102..17151TCONS_00053920-exon-scaffold_237-1510915933:17102..17151Clytia hemisphaericaexon
TCONS_00053920-exon-scaffold_237-1575043694:17102..17151TCONS_00053920-exon-scaffold_237-1575043694:17102..17151Clytia hemisphaericaexon
TCONS_00053920-exon-scaffold_237-1491911889:17952..18021TCONS_00053920-exon-scaffold_237-1491911889:17952..18021Clytia hemisphaericaexon
TCONS_00053920-exon-scaffold_237-1510915933:17952..18021TCONS_00053920-exon-scaffold_237-1510915933:17952..18021Clytia hemisphaericaexon
TCONS_00053920-exon-scaffold_237-1575043694:17952..18021TCONS_00053920-exon-scaffold_237-1575043694:17952..18021Clytia hemisphaericaexon
TCONS_00053920-exon-scaffold_237-1491911889:20082..20100TCONS_00053920-exon-scaffold_237-1491911889:20082..20100Clytia hemisphaericaexon
TCONS_00053920-exon-scaffold_237-1510915933:20082..20100TCONS_00053920-exon-scaffold_237-1510915933:20082..20100Clytia hemisphaericaexon
TCONS_00053920-exon-scaffold_237-1575043694:20082..20100TCONS_00053920-exon-scaffold_237-1575043694:20082..20100Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_237supercontigscaffold_237:418..20100 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	3.03548e-09	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
Blast
[Close]
BLAST of TCONS_00053920 vs. Swiss-Prot (Human)
Match: HYI (Putative hydroxypyruvate isomerase OS=Homo sapiens GN=HYI PE=1 SV=2)

HSP 1 Score: 131.724 bits (330), Expect = 4.338e-36
Identity = 74/214 (34.58%), Postives = 116/214 (54.21%), Query Frame = 2 
Query:  143 PLRFSANLSFLFSQIEDPGQRYNLAKQAGFTSVEWGNDIYQYPIHDLVEINKDNHFEHVLINMFTGKTK----GLACVPGRSEEFKQCLELSIEYCKNLKCKRLHILAGQYSEDTDITQETKKTYHDTFINNVTFASERLALENMTILLEPISTI---DRYFMESADQAVDIIKELKCQNVKLQLDLFHQQRTRGSLTETITKYLDHIGHIQIS 763
            PLRFSANLS+LF ++     R   A  +GF +VE      + P        +      VLIN   G  +    GL  VPGR   F++ LE ++ Y K L C R+H++AG+  +  D     K      F+ N+  A+  LA E++  LLEPI+T     +YF+++  QA  I++++   N++LQ+D+FH Q   G+LT  I ++L  +GH+Q++
Sbjct:    3 PLRFSANLSWLFPELSGLPARVRAAGSSGFEAVEVAWPYAETPEALARAAREAG-LRLVLINTPPGDQEKGEMGLGAVPGRQAAFREGLEQAVRYAKALGCPRIHLMAGRVPQGADRI-AVKAEMEAVFLENLRHAAGVLAQEDLVGLLEPINTRITDPQYFLDTPQQAAAILQKVGRPNLQLQMDIFHWQIMDGNLTGNIREFLPIVGHVQVA 214
The following BLAST results are available for this feature:
BLAST of TCONS_00053920 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
HYI4.338e-3634.58Putative hydroxypyruvate isomerase OS=Homo sapiens... [more]
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