TCONS_00054366 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054366
Unique NameTCONS_00054366
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1230

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054366 ID=TCONS_00054366|Name=TCONS_00054366|organism=Clytia hemisphaerica|type=transcript|length=1230bp
TTAGTTTAGATATGAACAAAAATGATAATATGCTATTGTCAGCAATATTT
TTACTCTTGATTGGTTTCATCGAAAgTGAAGTAACACCTTGCACTAAACT
TCCAGAAGTTGTAACATTTAAATATGGTTCAAAGCCATCATTTGATGTTT
GTTTGAAAGCAAAGCAACGTCCAACATTAGTATACAAATTTGCTGACGGA
AATGAAACTCTCGTTAATGAGATCATCAGTCAAGACAATCAAAGAGAAAG
ATaccattttaaaatcaatttaccAAAGCTTCAAGAAAAGCATTGCGGGA
ACGTTTTAATATTACGTTATTCTGGTGGTGGGAAGGAGATGTTTGGTGAA
CATCGCCTGACTGTTGTAGTTATTGACATTCCTTTAGACGTCAACCTATT
AACCTACCATTATGATGGCAGAGTCACAAAAATTACTTGGACGCCCATCA
ACACAGGGGGTTGCCAGGCGGTGAAGTACTTCATTCGCATACAAGAATTT
TCTggagatttcgaaaaatttgggcCGATAAGCAATACATCATGGGAAAC
AAACCAGTTAATATCACCCCATCGAATGAGTGTTTATGCGAAAGATGGAT
CAAGAGAAGGAAAACCATCTATTGATCTTTTTAAGATCAGTGGTGATCAA
ATCAACACGGtACAGAAGACAAATCCTAGAAGCTCTTCGCAAGCTGGATT
TTCTTCGTATGTGTGGATTGGTATTACTGCTGGAGTTTCTCTCTTTATGG
CTCTCATCACTTTTTTCGTCACATATCTATTGTACAGGAAAAGAATGAAA
CGCAGGGCTCCGTCAGCAAAATATGTGAATTCGTACACAGATTTACCAGA
AAATTATCATCTAGAGAATCGGACACAAACAGGGCTTTCTGGTAAATATG
CAAGTCTTTCGTATGTTCAACCGAATAAACTATCTAATCGAATAGAAGAA
TGCGATGAACTACCTACGGATAACGGATATGAATTAAACGATAGCTACTA
TGAAGTGAATCCAAAATAGTTGGTGATTGTCCGCAATGTAAATAGTAATG
TAAATAGACTTTTATTATACGTATTCGAtattttggagaattttttattt
ttttttacaatttccgGATGCTGTTATCCGCTTCGAAGTTTCAACTTTTA
TTTATGACTACTGTACTATAATTACTAAACTACGAGAACGCACAATAAAT
ATCAAACGAGATATCAAAAATCGACTCAGG
Run BLAST on NCBI

protein sequence of TCONS_00054366-protein

>TCONS_00054366-protein ID=TCONS_00054366-protein|Name=TCONS_00054366-protein|organism=Clytia hemisphaerica|type=polypeptide|length=338bp
SLDMNKNDNMLLSAIFLLLIGFIESEVTPCTKLPEVVTFKYGSKPSFDVC
LKAKQRPTLVYKFADGNETLVNEIISQDNQRERYHFKINLPKLQEKHCGN
VLILRYSGGGKEMFGEHRLTVVVIDIPLDVNLLTYHYDGRVTKITWTPIN
TGGCQAVKYFIRIQEFSGDFEKFGPISNTSWETNQLISPHRMSVYAKDGS
REGKPSIDLFKISGDQINTVQKTNPRSSSQAGFSSYVWIGITAGVSLFMA
LITFFVTYLLYRKRMKRRAPSAKYVNSYTDLPENYHLENRTQTGLSGKYA
SLSYVQPNKLSNRIEECDELPTDNGYELNDSYYEVNPK
Run BLAST on NCBI

transcript from alignment at scaffold_242:918360..924054-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054366 ID=TCONS_00054366|Name=TCONS_00054366|organism=Clytia hemisphaerica|type=transcript|length=5695bp|location=Sequence derived from alignment at scaffold_242:918360..924054- (Clytia hemisphaerica)
TTAGTTTAGATATGAACAAAAATGATAATATGCTATTGTCAGCAATATTT
TTACTCTTGATTGGTTTCATCGAAAGTAAGGAGGCACATAATCTTCGAGT
TATATGATCGAGTTATATGGCTTCGAGTTATGAAATCTTCGAGTTAAGGC
CCGTAACTCGAAATAAAAATGAAGCATTTTCATTNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNAGAGTCAATAAGGACCGAATTGTCAAATTGTGAAC
AGAAGAGAACCCTTTGAAAAGTTCAAAATAATGTCTTTTAGTTTTAGAAT
TTTCTGGACTAAAAACTGTTTAATAGTTTATGAAAATCTACCGCCTTGTT
TACTGGTTTTTTACCACAGTAATATTTCTCAACTTCAGTTCAGCTAGAAT
CTCAGTATTTTATGTGTGTATGAATAATTGGTTTACGGAGCTGGAATTTG
GCATACACCTTCCTTAGGTCGAAACTTAGGGGTAGTTTGTTCATTTCTTT
AAATTTCGATTTATTTTGCGAGTTATCCCCGGAATTACCGAGATCTTGCG
TTTATTAAACGTCATAAAATTAAAATAATTGACGTCAAATATTTTTAAAG
AGTAGTCAGGAATATGTTGGACGGTGAAAAAGAATGCGGCTATTATATTT
TGATTTTTCCCAAGAGCCAGAAATAGATTTTAGTTGATTTCATTGTTGAT
GTCAAATATTATTTTTATTGATTTTTAAAATCCCGTTCTCCTGGTCCCAA
GTCTACAATAATATTGAGTTTACAATTGTGCCTTCTCTAATCCCGAACGC
CCATCAACAAGTGACGAGGGTGTATAGTTAGCCTTTTCCTAAATCGTGTA
ACCATCACCGTACTCAGTCCCTAATACCAAGTACTTCAATCAGTATCACA
TTGGGTTTACAACTGAGCCTTCTCTACCCCATCTACCTGGGTTTATAAAT
TCTCTAAGTTCACAACCGAGCCTTCCCTTTATCCATAGTCGATTGATAAA
GTTTGGGGCATTTTATTTATGACGTCACTTTTTAACACAAATTCCTGTAA
ATAAGATTTTCAAAAAGTTCTCGAAAGACAATTCTGACTATTTTATGACG
AAAAGTAGATGACGAAACTGGGGTCAATTGTAAAACTTCGTCGTTTAGAA
CCCCTAAAATGACTGAAAAAATGGCCAAAAATCCGCAACATTGCTTAATT
ACTCAGCAAAAATCCATTTGCTTCCATGGTTTTAAACGGCTGAAATTGTT
ATTTGAAAAGTCAATTTTTCCATCCAATACGTACCTAACTGATAGACACA
ACTAACCCTATTTACGTAACTCGAAACCAATATTGTAACATTTTGAGTTC
GAGTTATATAACTCGAGATCATTTTGATGGCATTTTAATTTCGAGTTATA
TAACTCGAAATCATTTTGACGAAATTTTCATTTCGAGTTATATAACTCGA
AATTAAAATGCCATCAAAATGATTTCGAGTTATTTTCCTTGATTTAACTC
GACAGGAAAATGATCAATAAAAAAACTGAGTTAAAAAAATAACTCTAAAT
GAAAATGCTTCATTTTTATTTCGAGTTACGGGCCTTAACTCGAAGATTTC
ATAACTCGAAGCCATATAACTCGATCATATAACTCGAAGATTATGTGCCT
CGAAAGTAAGTGATCGTTTTACATAATGTTATTTGATTTCATGAAAAATT
CTGCTTCTCAGGTTTTGTTAATTCTACAAAAATAGTAAAAAGGGTAATTT
CTTAGGGTATGACCAATACCATTTGGCTATCATTTATTACACGTTTTTTT
ATAAGAACAAACTATATTAAGGATATAGGATTTTGATGGCCAAAATATTA
AGGACAAGTTAAGAACATTTAAGACTTCAAAGACTTCAAAATACCCAATT
TTTTTAAGGAATGTACAATTAAAAGAACATTTTTAGGCTTAAAACTCAAA
AAGCTTTTATTCGAATTCTTCAAAAATTTTGGATGTTCTTTTAAAAATGT
ACATAAGCTTGAAACTCTAAATCCTCCTGGTAAATTTCTGCACTATGTAT
TCATGCTATTGTTAATACAATATACTTTCACTTTCAGGTGAAGTAACACC
TTGCACTAAACTTCCAGAAGTTGTAACATTTAAATATGGTTCAAAGCCAT
CATTTGATGTTTGTTTGAAAGCAAAGCAACGTCCAACATTAGTATACAAA
TTTGCTGACGGAAATGAAACTCTCGTTAATGAGATCATCAGTCAAGACAA
TCAAAGAGAAAGATACCATTTTAAAATCAATTTACCAAAGCTTCAAGAAA
AGCATTGCGGGAACGTTTTAATATTACGTTATTCTGGTGGTGGGAAGGAG
ATGTTTGGTGAACATCGCCTGACTGTTGTAGTTATTGGTAAGTTAGTAGT
TACTGATCTATTTGAATAATTCATTTCAATAATAGTTACAACTAGAGCGG
TACTAGAATTGGTTACGGTAAATGCAGCCAATTTTACTTTTAATGTAACA
CAATGTTAGTACAGAAGATTTTGAATACTGAGTTCTCGTGAATAGAAAAA
GTAATGGTATGACAATTTAAGATCAATTTTTTTTTTCATATTGCAGACAT
TCCTTTAGACGTCAACCTATTAACCTACCATTATGATGGCAGAGTCACAA
AAATTACTTGGACGCCCATCAACACAGGGGGTTGCCAGGCGGTGAAGTAC
TTCATTCGCATACAAGAATTTTCTGGAGATTTCGAAAAATTTGGGCCGAT
AAGCAATACATCATGGGAAACAAACCAGTTAATATCACCCCATCGAATGA
GTGTTTATGCGAAAGATGGATCAAGAGAAGGAAAACCATCTATTGATCTT
TTTAAGATCAGTGGTGATCAAATCAACACGGGTATGACTTTTCAAATCGA
TACACGTTTTGTTTTATAAGAAACTATATAAGAACATAAGGCTTCGATGG
GCTAAAATGTTAAGAACAAATTAAGAACATTTATAGCCTTTTTTCTTTGA
AAATTGACAAAGGACAAAAACGCTCGTTAAAGTTAAGAACATCCAAAGGC
TTCAAAAATTTTGGATGTCTTGTATTAAAAAAACGTGTAGCTTTGTTCGT
GCTGTGATGATTTTTGCAAATGACGAAATATTTCCCGACGAACATGATAC
CTTATATAGTTGCTCTATGGGTTTACGCACCCCTATTATGGAAAATTAAG
AAAACTTTTAGAAGTAGATTGATTCCTGTATTTGGATGCAAGAATTTTTT
AGACTTTTTGAATGGAAAGTTGTGATGAATATAAAAGAGATTTTTTAGCT
TTTTTTTTCTGCTGCTCATGAAGATTAAAAACCCTGCGAATAATGTTTAA
GTGATTTTACTTTTAATGTACATTACTTGGGTTTAAATGCATATTATTTT
TAACTTTTCAGTACAGAAGACAAATCCTAGAAGCTCTTCGCAAGCTGGAT
TTTCTTCGTATGTGTGGATTGGTATTACTGCTGGAGTTTCTCTCTTTATG
GCTCTCATCACTTTTTTCGTCACATATCTATTGTACAGTAAGTAAATAAC
ACCTAACTCTAACGGTACGGAGTTTAACGAAACCAAATAAACTCATTTTT
ATAAGAACCAGTAGATTTTTTATGAGGCTCGGCTGTTCTTATTTTTTCGT
AATTTGAACCTCAAATTGTTCTTATTTTTGAGGTATTTTAGACTTTTAGT
CATCAATGCTAACCCGGTTTCTGCGTTTTAGCGGTAAAAAGTGAAATTCA
GTCTGGTGCGAAGCTGTATTTTGAGAACTAAACCTGACAATTAAAATATG
AAACTGGACTCTAATAAATTTGTTACGATTGTTGATTGATTTTCCTTTTC
TTAACTTTCCAGGGAAAAGAATGAAACGCAGGGCTCCGTCAGCAAAATAT
GTGGTAAGAGTTATTCTCAGCTCAATCTATAATATTTCAAACTATCACAG
AATGTTTATAGAATACCGCATTACTTAGAATAAAAGCTGTCTTCTTTCGA
ATGCTGCCACTCGAATATATCCCCCCCTTGGAGTAAAAATTTTCAATAAA
TGTCCTCACCTCCCTCAAATAAACACCCCATTTGAATAAACGCCACTCCT
CTGGAAGGGGGCGTTTTTATAGAAACGAGAAACTGTAAGGAAGCGTCATT
ATTCGAATTAATAATAGGTATTGGCTTTACCAGGTGAGATCTAGCGTTTT
AGGATGTTATGAATGTTCGATAGGCGTTGAAACAACAACGAATTGTTTGC
TGATGCTTGAATACGATTTTTTTTCTTTTCTAACTTTTATAGAATTCGTA
CACAGATTTACCAGAAAATTATCATCTAGAGAATCGGACACAAACAGGGC
TTTCTGGTAAATATGCAAGTCTTTCGTATGTTCAACCGAATAAACTATCT
AATCGAATAGAAGAATGCGATGAACTACCTACGGATAACGGATATGAATT
AAACGATAGCTACTATGAAGTGAATCCAAAATAGTTGGTGATTGTCCGCA
ATGTAAATAGTAATGTAAATAGACTTTTATTATACGTATTCGATATTTTG
GAGAATTTTTTATTTTTTTTTACAATTTCCGGATGCTGTTATCCGCTTCG
AAGTTTCAACTTTTATTTATGACTACTGTACTATAATTACTAAACTACGA
GAACGCACAATAAATATCAAACGAGATATCAAAAATCGACTCAGG

Coding sequence (CDS) from alignment at scaffold_242:918360..924054-

>TCONS_00054366 ID=TCONS_00054366|Name=TCONS_00054366|organism=Clytia hemisphaerica|type=CDS|length=6102bp|location=Sequence derived from alignment at scaffold_242:918360..924054- (Clytia hemisphaerica)
AATTCGTACACAGATTTACCAGAAAATTATCATCTAGAGAATCGGACACA
AACAGGGCTTTCTGGTAAATATGCAAGTCTTTCGTATGTTCAACCGAATA
AACTATCTAATCGAATAGAAGAATGCGATGAACTACCTACGGATAACGGA
TATGAATTAAACGATAGCTACTATGAAGTGAATCCAAAATAGGGAAAAGA
ATGAAACGCAGGGCTCCGTCAGCAAAATATGTGTACAGAAGACAAATCCT
AGAAGCTCTTCGCAAGCTGGATTTTCTTCGTATGTGTGGATTGGTATTAC
TGCTGGAGTTTCTCTCTTTATGGCTCTCATCACTTTTTTCGTCACATATC
TATTGTACAACATTCCTTTAGACGTCAACCTATTAACCTACCATTATGAT
GGCAGAGTCACAAAAATTACTTGGACGCCCATCAACACAGGGGGTTGCCA
GGCGGTGAAGTACTTCATTCGCATACAAGAATTTTCTGGAGATTTCGAAA
AATTTGGGCCGATAAGCAATACATCATGGGAAACAAACCAGTTAATATCA
CCCCATCGAATGAGTGTTTATGCGAAAGATGGATCAAGAGAAGGAAAACC
ATCTATTGATCTTTTTAAGATCAGTGGTGATCAAATCAACACGGGTGAAG
TAACACCTTGCACTAAACTTCCAGAAGTTGTAACATTTAAATATGGTTCA
AAGCCATCATTTGATGTTTGTTTGAAAGCAAAGCAACGTCCAACATTAGT
ATACAAATTTGCTGACGGAAATGAAACTCTCGTTAATGAGATCATCAGTC
AAGACAATCAAAGAGAAAGATACCATTTTAAAATCAATTTACCAAAGCTT
CAAGAAAAGCATTGCGGGAACGTTTTAATATTACGTTATTCTGGTGGTGG
GAAGGAGATGTTTGGTGAACATCGCCTGACTGTTGTAGTTATTGAGTTTA
GATATGAACAAAAATGATAATATGCTATTGTCAGCAATATTTTTACTCTT
GATTGGTTTCATCGAAAAATTCGTACACAGATTTACCAGAAAATTATCAT
CTAGAGAATCGGACACAAACAGGGCTTTCTGGTAAATATGCAAGTCTTTC
GTATGTTCAACCGAATAAACTATCTAATCGAATAGAAGAATGCGATGAAC
TACCTACGGATAACGGATATGAATTAAACGATAGCTACTATGAAGTGAAT
CCAAAATAGGGAAAAGAATGAAACGCAGGGCTCCGTCAGCAAAATATGTG
TACAGAAGACAAATCCTAGAAGCTCTTCGCAAGCTGGATTTTCTTCGTAT
GTGTGGATTGGTATTACTGCTGGAGTTTCTCTCTTTATGGCTCTCATCAC
TTTTTTCGTCACATATCTATTGTACAACATTCCTTTAGACGTCAACCTAT
TAACCTACCATTATGATGGCAGAGTCACAAAAATTACTTGGACGCCCATC
AACACAGGGGGTTGCCAGGCGGTGAAGTACTTCATTCGCATACAAGAATT
TTCTGGAGATTTCGAAAAATTTGGGCCGATAAGCAATACATCATGGGAAA
CAAACCAGTTAATATCACCCCATCGAATGAGTGTTTATGCGAAAGATGGA
TCAAGAGAAGGAAAACCATCTATTGATCTTTTTAAGATCAGTGGTGATCA
AATCAACACGGGTGAAGTAACACCTTGCACTAAACTTCCAGAAGTTGTAA
CATTTAAATATGGTTCAAAGCCATCATTTGATGTTTGTTTGAAAGCAAAG
CAACGTCCAACATTAGTATACAAATTTGCTGACGGAAATGAAACTCTCGT
TAATGAGATCATCAGTCAAGACAATCAAAGAGAAAGATACCATTTTAAAA
TCAATTTACCAAAGCTTCAAGAAAAGCATTGCGGGAACGTTTTAATATTA
CGTTATTCTGGTGGTGGGAAGGAGATGTTTGGTGAACATCGCCTGACTGT
TGTAGTTATTGAGTTTAGATATGAACAAAAATGATAATATGCTATTGTCA
GCAATATTTTTACTCTTGATTGGTTTCATCGAAAAATTCGTACACAGATT
TACCAGAAAATTATCATCTAGAGAATCGGACACAAACAGGGCTTTCTGGT
AAATATGCAAGTCTTTCGTATGTTCAACCGAATAAACTATCTAATCGAAT
AGAAGAATGCGATGAACTACCTACGGATAACGGATATGAATTAAACGATA
GCTACTATGAAGTGAATCCAAAATAGGGAAAAGAATGAAACGCAGGGCTC
CGTCAGCAAAATATGTGTACAGAAGACAAATCCTAGAAGCTCTTCGCAAG
CTGGATTTTCTTCGTATGTGTGGATTGGTATTACTGCTGGAGTTTCTCTC
TTTATGGCTCTCATCACTTTTTTCGTCACATATCTATTGTACAACATTCC
TTTAGACGTCAACCTATTAACCTACCATTATGATGGCAGAGTCACAAAAA
TTACTTGGACGCCCATCAACACAGGGGGTTGCCAGGCGGTGAAGTACTTC
ATTCGCATACAAGAATTTTCTGGAGATTTCGAAAAATTTGGGCCGATAAG
CAATACATCATGGGAAACAAACCAGTTAATATCACCCCATCGAATGAGTG
TTTATGCGAAAGATGGATCAAGAGAAGGAAAACCATCTATTGATCTTTTT
AAGATCAGTGGTGATCAAATCAACACGGGTGAAGTAACACCTTGCACTAA
ACTTCCAGAAGTTGTAACATTTAAATATGGTTCAAAGCCATCATTTGATG
TTTGTTTGAAAGCAAAGCAACGTCCAACATTAGTATACAAATTTGCTGAC
GGAAATGAAACTCTCGTTAATGAGATCATCAGTCAAGACAATCAAAGAGA
AAGATACCATTTTAAAATCAATTTACCAAAGCTTCAAGAAAAGCATTGCG
GGAACGTTTTAATATTACGTTATTCTGGTGGTGGGAAGGAGATGTTTGGT
GAACATCGCCTGACTGTTGTAGTTATTGAGTTTAGATATGAACAAAAATG
ATAATATGCTATTGTCAGCAATATTTTTACTCTTGATTGGTTTCATCGAA
AAATTCGTACACAGATTTACCAGAAAATTATCATCTAGAGAATCGGACAC
AAACAGGGCTTTCTGGTAAATATGCAAGTCTTTCGTATGTTCAACCGAAT
AAACTATCTAATCGAATAGAAGAATGCGATGAACTACCTACGGATAACGG
ATATGAATTAAACGATAGCTACTATGAAGTGAATCCAAAATAGGGAAAAG
AATGAAACGCAGGGCTCCGTCAGCAAAATATGTGTACAGAAGACAAATCC
TAGAAGCTCTTCGCAAGCTGGATTTTCTTCGTATGTGTGGATTGGTATTA
CTGCTGGAGTTTCTCTCTTTATGGCTCTCATCACTTTTTTCGTCACATAT
CTATTGTACAACATTCCTTTAGACGTCAACCTATTAACCTACCATTATGA
TGGCAGAGTCACAAAAATTACTTGGACGCCCATCAACACAGGGGGTTGCC
AGGCGGTGAAGTACTTCATTCGCATACAAGAATTTTCTGGAGATTTCGAA
AAATTTGGGCCGATAAGCAATACATCATGGGAAACAAACCAGTTAATATC
ACCCCATCGAATGAGTGTTTATGCGAAAGATGGATCAAGAGAAGGAAAAC
CATCTATTGATCTTTTTAAGATCAGTGGTGATCAAATCAACACGGGTGAA
GTAACACCTTGCACTAAACTTCCAGAAGTTGTAACATTTAAATATGGTTC
AAAGCCATCATTTGATGTTTGTTTGAAAGCAAAGCAACGTCCAACATTAG
TATACAAATTTGCTGACGGAAATGAAACTCTCGTTAATGAGATCATCAGT
CAAGACAATCAAAGAGAAAGATACCATTTTAAAATCAATTTACCAAAGCT
TCAAGAAAAGCATTGCGGGAACGTTTTAATATTACGTTATTCTGGTGGTG
GGAAGGAGATGTTTGGTGAACATCGCCTGACTGTTGTAGTTATTGAGTTT
AGATATGAACAAAAATGATAATATGCTATTGTCAGCAATATTTTTACTCT
TGATTGGTTTCATCGAAAAATTCGTACACAGATTTACCAGAAAATTATCA
TCTAGAGAATCGGACACAAACAGGGCTTTCTGGTAAATATGCAAGTCTTT
CGTATGTTCAACCGAATAAACTATCTAATCGAATAGAAGAATGCGATGAA
CTACCTACGGATAACGGATATGAATTAAACGATAGCTACTATGAAGTGAA
TCCAAAATAGGGAAAAGAATGAAACGCAGGGCTCCGTCAGCAAAATATGT
GTACAGAAGACAAATCCTAGAAGCTCTTCGCAAGCTGGATTTTCTTCGTA
TGTGTGGATTGGTATTACTGCTGGAGTTTCTCTCTTTATGGCTCTCATCA
CTTTTTTCGTCACATATCTATTGTACAACATTCCTTTAGACGTCAACCTA
TTAACCTACCATTATGATGGCAGAGTCACAAAAATTACTTGGACGCCCAT
CAACACAGGGGGTTGCCAGGCGGTGAAGTACTTCATTCGCATACAAGAAT
TTTCTGGAGATTTCGAAAAATTTGGGCCGATAAGCAATACATCATGGGAA
ACAAACCAGTTAATATCACCCCATCGAATGAGTGTTTATGCGAAAGATGG
ATCAAGAGAAGGAAAACCATCTATTGATCTTTTTAAGATCAGTGGTGATC
AAATCAACACGGGTGAAGTAACACCTTGCACTAAACTTCCAGAAGTTGTA
ACATTTAAATATGGTTCAAAGCCATCATTTGATGTTTGTTTGAAAGCAAA
GCAACGTCCAACATTAGTATACAAATTTGCTGACGGAAATGAAACTCTCG
TTAATGAGATCATCAGTCAAGACAATCAAAGAGAAAGATACCATTTTAAA
ATCAATTTACCAAAGCTTCAAGAAAAGCATTGCGGGAACGTTTTAATATT
ACGTTATTCTGGTGGTGGGAAGGAGATGTTTGGTGAACATCGCCTGACTG
TTGTAGTTATTGAGTTTAGATATGAACAAAAATGATAATATGCTATTGTC
AGCAATATTTTTACTCTTGATTGGTTTCATCGAAAAATTCGTACACAGAT
TTACCAGAAAATTATCATCTAGAGAATCGGACACAAACAGGGCTTTCTGG
TAAATATGCAAGTCTTTCGTATGTTCAACCGAATAAACTATCTAATCGAA
TAGAAGAATGCGATGAACTACCTACGGATAACGGATATGAATTAAACGAT
AGCTACTATGAAGTGAATCCAAAATAGGGAAAAGAATGAAACGCAGGGCT
CCGTCAGCAAAATATGTGTACAGAAGACAAATCCTAGAAGCTCTTCGCAA
GCTGGATTTTCTTCGTATGTGTGGATTGGTATTACTGCTGGAGTTTCTCT
CTTTATGGCTCTCATCACTTTTTTCGTCACATATCTATTGTACAACATTC
CTTTAGACGTCAACCTATTAACCTACCATTATGATGGCAGAGTCACAAAA
ATTACTTGGACGCCCATCAACACAGGGGGTTGCCAGGCGGTGAAGTACTT
CATTCGCATACAAGAATTTTCTGGAGATTTCGAAAAATTTGGGCCGATAA
GCAATACATCATGGGAAACAAACCAGTTAATATCACCCCATCGAATGAGT
GTTTATGCGAAAGATGGATCAAGAGAAGGAAAACCATCTATTGATCTTTT
TAAGATCAGTGGTGATCAAATCAACACGGGTGAAGTAACACCTTGCACTA
AACTTCCAGAAGTTGTAACATTTAAATATGGTTCAAAGCCATCATTTGAT
GTTTGTTTGAAAGCAAAGCAACGTCCAACATTAGTATACAAATTTGCTGA
CGGAAATGAAACTCTCGTTAATGAGATCATCAGTCAAGACAATCAAAGAG
AAAGATACCATTTTAAAATCAATTTACCAAAGCTTCAAGAAAAGCATTGC
GGGAACGTTTTAATATTACGTTATTCTGGTGGTGGGAAGGAGATGTTTGG
TGAACATCGCCTGACTGTTGTAGTTATTGAGTTTAGATATGAACAAAAAT
GATAATATGCTATTGTCAGCAATATTTTTACTCTTGATTGGTTTCATCGA
AA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034277XLOC_034277Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054366-proteinTCONS_00054366-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054366-exon-scaffold_242-1575043694:923980..924054TCONS_00054366-exon-scaffold_242-1575043694:923980..924054Clytia hemisphaericaexon
TCONS_00054366-exon-scaffold_242-1575043694:920668..920967TCONS_00054366-exon-scaffold_242-1575043694:920668..920967Clytia hemisphaericaexon
TCONS_00054366-exon-scaffold_242-1575043694:920174..920458TCONS_00054366-exon-scaffold_242-1575043694:920174..920458Clytia hemisphaericaexon
TCONS_00054366-exon-scaffold_242-1575043694:919518..919643TCONS_00054366-exon-scaffold_242-1575043694:919518..919643Clytia hemisphaericaexon
TCONS_00054366-exon-scaffold_242-1575043694:919152..919192TCONS_00054366-exon-scaffold_242-1575043694:919152..919192Clytia hemisphaericaexon
TCONS_00054366-exon-scaffold_242-1575043694:918360..918762TCONS_00054366-exon-scaffold_242-1575043694:918360..918762Clytia hemisphaericaexon
TCONS_00054366-exon-scaffold_242-1510915933:923980..924054TCONS_00054366-exon-scaffold_242-1510915933:923980..924054Clytia hemisphaericaexon
TCONS_00054366-exon-scaffold_242-1510915933:920668..920967TCONS_00054366-exon-scaffold_242-1510915933:920668..920967Clytia hemisphaericaexon
TCONS_00054366-exon-scaffold_242-1510915933:920174..920458TCONS_00054366-exon-scaffold_242-1510915933:920174..920458Clytia hemisphaericaexon
TCONS_00054366-exon-scaffold_242-1510915933:919518..919643TCONS_00054366-exon-scaffold_242-1510915933:919518..919643Clytia hemisphaericaexon
TCONS_00054366-exon-scaffold_242-1510915933:919152..919192TCONS_00054366-exon-scaffold_242-1510915933:919152..919192Clytia hemisphaericaexon
TCONS_00054366-exon-scaffold_242-1510915933:918360..918762TCONS_00054366-exon-scaffold_242-1510915933:918360..918762Clytia hemisphaericaexon
TCONS_00054366-exon-scaffold_242-1491911889:923980..924054TCONS_00054366-exon-scaffold_242-1491911889:923980..924054Clytia hemisphaericaexon
TCONS_00054366-exon-scaffold_242-1491911889:920668..920967TCONS_00054366-exon-scaffold_242-1491911889:920668..920967Clytia hemisphaericaexon
TCONS_00054366-exon-scaffold_242-1491911889:920174..920458TCONS_00054366-exon-scaffold_242-1491911889:920174..920458Clytia hemisphaericaexon
TCONS_00054366-exon-scaffold_242-1491911889:919518..919643TCONS_00054366-exon-scaffold_242-1491911889:919518..919643Clytia hemisphaericaexon
TCONS_00054366-exon-scaffold_242-1491911889:919152..919192TCONS_00054366-exon-scaffold_242-1491911889:919152..919192Clytia hemisphaericaexon
TCONS_00054366-exon-scaffold_242-1491911889:918360..918762TCONS_00054366-exon-scaffold_242-1491911889:918360..918762Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_242supercontigscaffold_242:918360..924054 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.45544	6.09927	2.67536	2.07854	2.48356	2.6661	2.81447	3.09493	3.39665	3.66326	3.73167	3.30931	11.578	9.81591	2.58477	3.43026	2.26941	4.65215	20.6114	44.3349	3.7292	4.22788	7.64955	8.8743	8.28225	13.3184	119.068	96.8684	40.1103	38.9406
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00054366 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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