TCONS_00054599 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054599
Unique NameTCONS_00054599
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1095

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054599 ID=TCONS_00054599|Name=TCONS_00054599|organism=Clytia hemisphaerica|type=transcript|length=1095bp
ACAAGGTGTTGTAAACATACACGAATTAGCATATTAATATTTAGATTTCA
TTTAGGCAACATCGGTGAACTTTTCACCCAAATACTTGGAGAAAAGGAAT
GAGGTTGTCAAGACTCCAGGATTGAAAACACAACGCTCGATATCAGTTAA
CTCGatgacgtcattcaaCAGTCCTTCACAACATTCTCCAAAGATGAATG
AGGCTTCCAACGAAGAAAAGACTGGGGATAGCGAACAGGTTCAAATCCCT
TTCGAAGCTTCCATGGCACGCCTTATTGTGTATTGTATAAGTGTACCTTA
TAAACATGGGGAAACCAACCCCAACTGTTGTGAAATGcattattttagtg
aaaaccaAATTTCAACACTGGTTGAAAAATGTCCCTTAGagATGATCTAT
TTGACACAACGCAAATTTATTCGAACATATCCCAAAGCATCACGGGTAGA
TTCATCAAATTACAATCCTATGTTGTCATGGAGACACGGAATACAAATGG
CTGCAATCAATGTTCAAAAACCTGATAATGGATTTTATATAAACGATGGA
CTCTTCATAAAATCTAATGGCACTGGATACGTTTTCAAGCCGTCACAGAT
GACAACAAAAgGATCTACATATCACCCTCAGATGACGAAACCGGCTACCG
GTGATTTTTCACAAAGAATGAAAATCGAGATCTTTTGTGGTCAGTTTGTT
GAAAGTGAACATTTTACAGACCTACCAGTTGCTATAGAGATGGAAATTAT
CGGCGCCGTAGAAAAAGATTGTCAATCTTTTTACACTGAGCCGTCAAATA
ACCTGTTCAATCCTGTTTGGGAACgaagcactttcactttcgatttatCG
TTACCCTCAATGTGCTTGTTGCTGGTAAAGGTTGTGAGTGTGTCACGTGT
CAACCGATTAGTTTAAAGACAGGTAATTTGTTTTGATAGAATTTCCCGGG
TACTAAAATCTCGGATTGAGGTCATCCCTGAGTATTTCCATGGTCTTTGT
GTCTTTTAACTACCTATGGCTATTTGTTGGTGAAATATCCTTACTAATTG
TCATCGTTATCAATAAACATTTTAAACTTGTCCTTGGAACGttct
Run BLAST on NCBI

protein sequence of TCONS_00054599-protein

>TCONS_00054599-protein ID=TCONS_00054599-protein|Name=TCONS_00054599-protein|organism=Clytia hemisphaerica|type=polypeptide|length=253bp
MTSFNSPSQHSPKMNEASNEEKTGDSEQVQIPFEASMARLIVYCISVPYK
HGETNPNCCEMHYFSENQISTLVEKCPLEMIYLTQRKFIRTYPKASRVDS
SNYNPMLSWRHGIQMAAINVQKPDNGFYINDGLFIKSNGTGYVFKPSQMT
TKGSTYHPQMTKPATGDFSQRMKIEIFCGQFVESEHFTDLPVAIEMEIIG
AVEKDCQSFYTEPSNNLFNPVWERSTFTFDLSLPSMCLLLVKVVSVSRVN
RLV
Run BLAST on NCBI

transcript from alignment at scaffold_243:186148..198603-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054599 ID=TCONS_00054599|Name=TCONS_00054599|organism=Clytia hemisphaerica|type=transcript|length=12456bp|location=Sequence derived from alignment at scaffold_243:186148..198603- (Clytia hemisphaerica)
ACAAGGTGTTGTAAACATACACGAATTAGCATATTAATATTTAGATTTCA
TTTAGGCAACATCGGTGAACTTTTCACCCAAATACTTGGAGAAAAGGAAT
GAGGTATGTAAATGATTGAAAATAGTTTGTTACGTAATAGTTATCGGACA
GTTGTGAGTACAATATGAGAAATATTTTACGAGCTCCGAGCTTTTTCCGT
ACAACATTTTCCGAGCCTTTAGGCGAGAATGAGTAAAATATTTCCATATT
GTACGAGCAAAGGTCTGATAACTGGTTTATCTGTGACCCAAAAAATACAT
TTTTCTGTGTTGGAAAAAAGCGGTCCGGTAGAATTAGCCTGAGACCTGGA
CAAAATTCCCAACAAGCTGAAATTTTGCACAGAGGTCCCNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGT
CCAGTTGAAGGTGGTGTTTCCGTTGAAGGTGGTGGTCCAGTTGAAGGTGG
TGTTTCCGTTGAAGGTGGTGGTCCAGTTGAAGGTGGTGTTTCCGTTGAAG
GTGGTGGTCCAGTTGAAGGTCGTGTTTCCGTTGAAGGTGGTGTTCCCGTT
GAAGCTGGTGTTTCCGCAGGAACAATAAAAAACTTTTTTGAGCAATATGC
AGCCGATAACATGGATAATAATCTGAGAACTCTAACAGGAAAGGGTACGT
TTCACGGGATGGGGATAATCTCCATGTCTACAAATGGTGCAAAAACATTC
CAAGCAATCAGACGTTTGAAGAAAAACGAGAAAAAACAAACAACGGGATC
CGTACCAATCATTCCTTATTTTGGATCTCATGAACGTGGCTTGTCAAAGC
TAAGATTCAAAAAGATTAAAGATCTTTCTGAGAGTTTCAAAGATGACGTC
ATGCACTATTACCAAGAGAAGACCATCGACCTTGTATGGCAATTAGCATG
GCACTTTAAAACCCGAGAATCTGCTAGACCGAATTGGCAAGGATTTATGC
AGACTGCGGCAGTACCAGAAAATAGCGACAATCCCGTGTCAAAGTCGTCC
ATAACATTCTTACCCATCATCGACCTCAGTTCATCTGACGAAACTTGCTT
ATACTCAACACTTCTATTCATTAAAGACGAAGCAAAGAAGCACAAAATTG
AAGTACCCTGTATCACCTTTGATCAGCCTCTATGGCAGAAAGCTATCGGG
ATCATACAGGATAAAAATTTGGTTATTGTGTGTCGTCTTGGTGGGTTTCA
TACGTTACTTAATAACAAGTTTCCTTGGTAGTATTGGGAAATTGATGATG
GGGTCTGGAATTGAGGAATTGTTTGAAGAAGTTTATGCTGAGGATACTGT
GAAACACATGACATCAGGGAAAGCCTATGCTAGGGCATATTACGAGTTCA
TTTGATGACTCAGAGTGTACTTGTGGAGCACCTCGTTGAAATCATGGATG
ATGAAGGAAAACTGCTCCCCATCAATGATTTCGAATCTTGCTACTCAAAA
CTTCTGAAAGGAGAGTTGGCAGTTGAAGATCTAGTTGAGTTTGCCAATGG
AGAAGGTGCAAAATCCTTTGAAAAGGAGATGAAGAAATTGAGTGATCGCT
TGAATGAAGATTCGAGAACCGCCAAACTATGGATCCAATATATCAACTAC
ATCGACATCGTCAAAGATTACATTATTGCAGAGTGAACATCCGATTGGAA
CTTCCATCTGAAAACTTTATCTAAAATGCTGAATCTTTTTGCTGCAACAG
GCCACGTTAACTACGCGAGAAGTGCAAAAATGTACCTCCAGCAAATGCCA
GAACTTAAAAAAAAGTACCCGTACCTGTTCGAAAAATTCTCCGCTGGTCA
ACATGCAGTGAGAATATCAAACCGCTACTGGGCTGGCTTGTGGTCTGACC
TAGTTATTGAACAAACGCTTGTGCGGTCTGCTAAAAGTCGAGGTGGGCTT
ACGCGAGGACAAGGAATGGAGGAGAATGTTCGTCAACTCTGGATTTCGAG
TATGAGCTATTGTGCAGCTGTCCATGATTCTATGACAACTTTGACCGGGG
TGAAAGTAATAAGTAGCGATCAACATCAAGAGATGGGGTTTTCCCGGATC
AAAACTGACAATGAACAATGAAGTTCTTCTGTTGGGTGGAGAAAAGGAAC
CCTTTCATCTTCAAAGATCAGCACCTACATTCGCTTTCATCAGGCGTTGT
ATCAATGAAAAACAAAGACAACGTGAACTGCGAAGAGGCCGAGAAAGTTG
GTAAGAAGTTCCAGGAAACTATCGATGAAAAGGCCTTCACGGACGCCAAA
CTTAAACGGAAAGACGAAGTGAAATCACTAGCAGTTATTCAAAATACGAT
AATTGTCGATGATGAACCAATAGCAGTTGACTCGACAAGCCTCTTCACTC
GCCTGGTGGCTGTTTCTCAAAGAGAAGAAAATGTGGAAAAGTATTTTGAG
TACGAGCTGACACAGTTTTTTTCTTTAAAAAGAGGATTGATGAGAAAACC
TGACAAAGCATCACTGAGAAAGCTAATTTTACCAGAACAGAAATCTTGTG
ATCGTTTGTCAAGTGGCTAGTTTGTTCTTGATGGTGGTGCTCTGATACAT
ATAGAGTCAGTTGGAGGAAAGGCATCACATTCATGGAAATAGCCTCATAT
CATGTCAGCTATGTGAGAGCCAACTATGGTACGTGTCGTGTCGTTTTCGA
TGGCTACNGACTCGACATCTGCTATATGTGGCAAGGCCAAAGTCAGTTTC
GTTAATCAAATCAAGAAATCAGAAATTTTGGGCGAAGTATCTGAAGCCTC
TACTGACTCTCAATCGACCAAGGAACAAATTCAGGATGTCTCAATCGTAG
CCTTCAGAGAGATATATGGTGGAAATCATGATAAATCACTTTCAAATTTA
AGGTATAGTTTACATAACAGTGTAATATGTACAATAAAATGCAACCATTC
TAACATTTAAGTATTCAAATGTCCATATGTATCAGATATTTTTATGATAA
TTGGTTTCAATTTCGACCACTTCAGATACAACAAATACCTTGAGATGCTT
TGCAAAGGATTAATTCAACCTGAGCGATTGCCCCCCCCACATCTGATGCT
GCAACGCAACATGGTGCCAGAGTTCACATCCAGGTAATCACCTCTGGCTG
ATCAAGTGCGAAACCAAAACCAAACAATTTATGAACTATAATAGATGTCA
TTTTCGTTACTTATTTAGGTGATTTGGTGGAAAGAACTTGATGAGAACGT
CTTAGACCCAACAAAATGGGGTTGGCAGGGCTCTGATACAGGTCTTCGTC
CAATTAGAACCATCAAGTCAGTCGCGCCACCCGAAATTCTCAAAATTATC
AAATGTAAATGCAAGATGTCCTCTAAGAATCCTTGTGGAACAAATCTTTG
CTCTTGCCGGAAAAATGGTATACCATGTATGCCTGCGTGTGGTAATTGCC
ATGGCATGGATTGTAACAATAAAACGGTAAGATTCCATAACCATTTAAGT
CTAGCCGGGCCAGAAAGCTTCTTTCTTAATTCTTATATNGTACCATGTAT
ACATGCGTGTGGTAATTGCCATGGCATGGATTGTAACAATAAAACGGAAA
GATTCCATAACCATTTAAGTCTAACCGGGCCTGAAATTTGGGGCGTAAAT
AAAGCTTCTTTCTTAATTCTTATATTGATGGTTTTCTCAGGTGGAAAGGG
ATCAAGACGGCGAGGAGATACCAGACGAAACAATACACGAAGCAACATAT
GACACGACAAATGAAACAACAGAGGAAAATCAGAACGAAACCTTCAATAA
CTTTTACGATGATAGGAATATTTTTGATTTGTTTGATTGAGGTCCTTGAA
AAACGAAACCGATTGTCCTTTATTTTTTATTGATAATGTATCCACTTTAA
GGCCTCATTAATCTTTGTGAGATGATTTTCAGGTTTCTTTGTAGGCAACT
TTTTTGTTCGTATTGAAATTATCTTTCTTTTGATATATGACACTTGCATA
TTTTGAGAACTTTTTTTTCAAGTTTTTTTTTCGGACGTGTCCGAAATTAA
ATCGTCCGTAAAAAGTTTTCCCATGTCCGAATCGATGGGGCTTTTTTTCT
GGTAGTCAAGTATCCTATTGGGGACCTATGTACAAAATTTCAGCTTGTTG
GGAATTTTGTCCAGGTTCTGGTGAAAATTTACATAATTCTACTGGACTGC
TTCTACCGCTACAATGCAACAACATCTTTTGGTCAATTTATATTTTGTAC
ATACAAAAATACAAAATACAAATACAAAATACAAGATATATTGTACTCTT
TTTAACCAATCAGATTGCTAATATTTTTTGGATCGCCGATAAAATTGATT
AATTTGAATAAAATTAACACTTTGACTTTGAGCTAGTTTGGAATTTTGTG
ATTTGCTTTTTTCAGTCTTACTCATAATAGGCATTTGATTATTTGACCTT
TCGCAACGTAAAAAGTACCGCCAAAATTGCTAAAATATGTTTACAATGTA
TTAATTCATGATATGCACCACTGGAGAGTCTTCTGAAAACTTTTAAAATT
CTCCACCCAATACGTCACTTAAACAATAGAAAAATTGACGTATTGGGTGG
AACAAAAACAGAAAAGTTGCATAATTTTGTGAAATCATTGCGGTGGTACA
TATCATGAATACCAATAAACACGAATATGCTTTATGTGAAGGTTGTCAAG
ACTCCAGGATTGAAAACACAACGCTCGATATCAGTTAACTCGGTAAGTAT
GTTTTACTCTTATTTTTGAAGAAAAAAATGAGCCTCAATACTCCAAAGAA
AAAGGGAATTTTAAGAAGTATAGCATGAATGAATTCGAAAGGTCAAAATT
AGGTGTAAAATAAGGTATTAAACCTACGAGAAAGTTTCGGACAGTTATCA
AGTAAATTTAGAATTTTCGGACATGTGTATAGTGCTACACTAAGAGATAT
CTTTACACGTGCATCATAGCTGGTTGAGACGGCCAGCTTTCTGATCTGAC
ATATTCTAAATGTAACATTTGACAACAGTTAAGATCGTGAATTTGACTTG
AAAGAAGTCATTGCATTTACGTTATTATGTGCTGTTTTCAGTCAATCGTT
GCTTTTTGAGTGCATTTTTAGGCATTCTCTAAAGATACAAAAATCTAAGC
TTTAGCCCCCAAATATCAAAATGCTTCCTACACTGTCTGCACCCAAAAAC
GTCGATGAATTTTGTTTTCTTTCTGACGCCTCAAATAATCGTTGAAAATA
AAAAAATGAGCCAAATGCCACTGATTTGTCACCTAAAGAATCTATCCTAG
TGCATAGTTCCATTTGAATCCATTTTGGATGAAAATCATTCAAGCTGAAA
GTTTAATTTTTTAAAGTTACTGCACCCCAAAATGTAGGTGAGCCTTTTTC
CCTATAGCTTCAGGTGGAACCAACAAATCTTGTCGATTTTTTGTATGATA
AGACCTAATAGAATACAGAATCGACAAAAATTTTAGAATAAGAGAGATGA
TCCAGAAAGTTGTCAAAAAAACTTGAATTGTTTTCTACTTCATCCCAAAA
TGAGGGTGTATTCTTTTGTGTGTTTTCAGAGAAAAGCAGAAAATTACGGG
ACTATTAATTCACAATCATTTGGTCATCTAAACCAAAGCATAATTGACCC
CCCAAGCTCCCGGACTGCTAAAATACTTATAAATTATTTTACGAGCGTCA
GATTTTCCCTGTATACTACAACGTTATGATCTTTTTCAGATGACGTCATT
CAACAGTCCTTCACAACATTCTCCAAAGATGAATGAGGTTGGAAAAGATT
CTTTATATCTCATTATTTTTTTATTCCAGGTCGATTCTAATTCACGATTT
TTTTTCACGATAGTCAAGACTTTCATTTTAAATCCGCTTCTACTACTAGC
AGGGGGGAATTTGTTTTTTGGTCGCTGGATTTTTTACTCAAAGCACTTAT
TATACATAAGTGAAAAAAGGAATGGGTAGGGGAATGGTAAGGGGTAGGGG
AATCAAATTCTCTTGGGTGCCAATTTTTTTTCGGACATTTTGGTGTTATG
TTCGGACAAATCTGACGGTCTCTGATGTTTTTTAAGGACCATAATTTGAT
AGACTAGCAAAATTATAGCGGAAATTTAAACAAATTGGGAACAACCTGAG
GCTCCAACCTCAGAAATATGCAAGAAAATGTCGAATTTCATTAAATATTT
GGGACTTGGGGCTAAGAACATACAACCATGGATAGTAGTACTGTTTACCC
AAAAATGAAAAAAAATGAAAGTTGCCGGAAATCGCCTAATTGGATTTTCG
TCGGAAAGTCCATAGCCCAAACCATGCTTGATGATGTTTAGTACTGTGTT
TTCGAAGAAAATTTCGTTAATTATATCTCATTTTATTCCTTTTTGCTAGG
CTTCCAACGAAGAAAAGACTGGGGATAGCGAACAGGTTCAAATCCCTTTC
GAAGCTTCCATGGCACGCCTTATTGTGTATTGTATAAGTGTACCTTATAA
ACATGGGGAAACCAACCCCAACTGTTGTGAAATGCATTATTTTAGTGAAA
ACCAAATTTCAACACTGGTTGAAAAATGTCCCTTAGGTANATTTTAGTGT
AAACCAAATTTCAACACTGGTTGAAAAATGTCCCTTAGGTAAATATAACA
CTATTACGTATTATTATCCATATCGGACATTCAAACAACGTTTTTTTCTA
GCGTCAGCTAAATCTTTTCACTTCAATGCTATGACTTTAATAAGTTTTTA
GCACCTTGCGAGTGGGCCGCAAATGACCAAAACGTGTTTTTTTCTGACGT
TAGTTTAGTCTCTTCGCTTCAATGCAACAACTTCAATCCAATTCCGAGCG
GGCCGCAAATGACGTTATTGCCCTATAACCCAGGCGGTTAATGATATTTC
AGCCCTCTGAAGCCTGGTGCTTTAGTTTCCTCAGCGCGGGTATGACAATT
TGAGTCACAAAACCTTTCAATAGCGCCCGCCGATTGAATCTTTAATGGCT
TACTTAATGACCGCTGTATGGATAATAATTGATGTTTGATGTGTTTCAGA
CATTGAGTTTAAAGCTCCAAAATGGCTAGAGAGGAATCTTCACCTTTCCT
AACCAAAAAGAAAGTGAAGCCTTAATTTTGCATAACATTTAGAAATCTTG
TTTGCAAAACACACGGGTCACGTGTTCTGGATAGGAAATTTCCAATCCAG
GAGTTTCGGATCTAGCACCTTCCGGTGCTTTAAAATCAATGGGTTCAGAC
GTGCGCGAAAAATGTCCTTCTTGTAAGTGAAGAACACTAAAAACTATTTG
AATTGTGATTTTGTGCTACCTGGTAATTTAGTTTTTCTGTACAACTCTGT
GTGCATTTTTCCTGTTTGACACAAAAGTTCACGTTGACAAGGTCCGTGAC
TTTGCTTAGCTTATTTTGAAAAATTCTAAAACATATTTTAATACGACTAG
TACTGCTTAACGAATCTTGGGTTTTTCTCCAATTTTTACTTCTGTGTAGG
AATTCCAAAAACGACGATTGTTGTTGTTTTTTTCAGAGATGATCTATTTG
ACACAACGCAAATTTATTCGAACATATCCCAAAGCATCACGGGTAGATTC
ATCAAATTACAATCCTATGTTGTCATGGAGACACGGAATACAAATGGCTG
CAATCAATGTTCAAAAACCTGGTCAGTTTTATTTTACTTTTGTTGTGCTA
CACGGCTTTAACATAAACCAGCAAATTTTGGCTTGGATAGCTTTTAACCA
TCCGAGCAACCAAAATGATGTGCACTTTTTTATAAGAACACACTATATAA
GAACATAATAGGCCTCGATGGCTGAATTATCAAGAACAAATTCAGAGCAC
CCTAAAACATCCAATTTCTTTGGAAAATGGGTCAAAAATACTCTTAAAAT
GGTGAAAATAAAAACATTTTAAGAACATTTTAGGCTTTAAACTCAAAAAA
TTAAGAACATCCAAAGGCTTCAAAATTGTGGATATTCTTATGAAAAAACG
TGTATATTTATGTTTTGTTCTTGTTAATACAGATAATGGATTTTATATAA
ACGATGGACTCTTCATAAAATCTAATGGCACTGGATACGTTCTCAAGCCG
TCACAGATGACAACAAAAGGTANATTCTTATAAAAAAACGTGTATATTTA
TGTTTTGTTCTTGTTAATACAGATAATGGATTTTATATAAACGATGGACT
CTTCATAAAATCTAATGGCACTGGATACGTTTTCAAGCCGTCACAGATGA
CAACAAAAGGTACTTTTTTTTAAATTGGCGAGACCAATTTAATTTGTTGT
TTTACGGGCCAAGCTACCCAAAAAAGAGGGTCGGTCGGTCTGTCGGCGAA
AAAATATAATAAAAGTAGAATTTCTCCTATAAAATCTCCTAAAAAGTCAG
CAAAAACTAGTACATCTTGACAAAAATGTCAAATAGAGAATAAAAAGACA
CCAAAATTTTGAAAATTTGGCAGTCTGTAAAGCAAACGTTTTACCAAAAT
CAATTTAATTTTATCTCGATTTTTGAGATTTCAGGGTTGGTCGGGCCCGT
AAATCAAATCGGTCTCGCCTAAGCATCCAAAAACTGGCTCGGAGATGATT
AGATCAATACTGAAAAATGCTTGAACGATATATCCTTGAGCAAAATTTTA
AGCAAGACTCTGTAGCCTCAAAAAATGTAGCTTCAAGGTAATGCTTAGAG
TAGAGTCCAGTGAAGCAGACAAGAGGATATCGCTATCTTGAATTTTTTCA
CTTTCGTTTTCAAAAATCATAAAAAAACAACCAAACAAGAAGTACCTCCA
AAATTTGAAAAAAGTTGGTTCATTAGTCATGGTTTTATGTTTGTTTTTCT
CTAAAAAGGGTGTGGATCTAGTGGCATGTATTTGATACCACCTCAAGCAA
AGCCAAAAAATGCAGTTTACCAACTTACACCGGGCCACTTATCAGCGCCA
CCCAGTCTATCAAAAAGCTATAAGTCTATTAAGCCCCCGGGCTAGGTAAT
CCTTAGTATACTCTTAAGTTTTTGCCATATAATATGATATATGCTTATAA
GTTCAATTCTTATTAAAAAAAAATTATTTTTATAAGTATGCTGATGAGGA
GGACAAATTAAAACTTTATTGAAACTCTATTTTCTTTACAGGATCTACAT
ATCACCCTCAGATGACGAAACCGGCTACCGGTGATTTTTCACAAAGAATG
AAAATCGAGGTTTGTAAGTTATATATCGAAAGTGTATCTGAAATCACTTT
ATTACTAGCCATCACAAAAAGTCTCAACTGAGTGAGAAATGGAATGGAAA
ATCTTATTGTTTGATTTCATCAGCAAGAAAATTTCAACATTTCTATGATT
TGTGAATATTTATTTTCCATTTATTCTTCGTATTTTTACAGATCTTTTGT
GGTCAGTTTGTTGAAAGTGAACATTTTACAGACCTACCAGTTGCTATAGA
GATGGAAATTATCGGCGCCGTAGAAAAAGATTGTCAATCTTTTTACACTG
AGGTATAAATGAGGCTCATTGTAACCGCACTAAACACTTTTTAATTTAGC
GAGGAACTTGCTTTGACGAGACAATAATTTTTTTTCCTTCTGATAAGAAC
TAATTTGTAAAAAAGTTGTTTTTTTTTCCAAAAANGCATTCTTCTTATGA
GTTTCTCCGGGAATCAAAAAAATATTTGTAAAATAAGGTAAGCATCACTC
GTTACGTAATTCATGGACTGCGCCTGCTAAACATTATTTACTTTTATCTA
TTTTTTCAAGCCGTCAAATAACCTGTTCAATCCTGTTTGGGAACGAAGCA
CTTTCACTTTCGATTTATCGTTACCCTCAATGGTATGTACTTTTAAGGGG
NGGAACTTGCTTTGACGAGACAGTAAATTTTTTTATTATTCTGATAAGAA
CTAATTTGTAAAAAAGTTGGTTCTTTTTCCAAAAAGTGAGTAATTCAGAC
AACAGACAAAACTAAGGTTTTTAGGAACTTACTTTGGCGTGACGAAATTT
GTCAAAATTTGCTAAATTGGCCAAAAGAAATTCCCTTGAGATATTTACTA
AAAGACACCAGTAGCTGTTGCTGAGGAGCTATCACAAGTGGTCTAAGGCG
TTTATGTGTATGAAATTTATCGTAGATTAGTTTCTCTATTATTGTAAATT
TTGGCCAAAACTCATAGAAAAATGAAAAAAAGAGACTCGTTCGCAAACTT
TACTCAACGCAAAAATTTTAGATTCTCGCTTTGCGNTATGTGATTTTTGA
CTTTCAAATTACCTTTGAATGGATAACCAGAGATAAAAATTCCATCTTAC
CATGGTTGTGACTTCAGCGCTTACTTTGTCGTTACGGTGATATATTTTAC
TTTCAACTATGTGTAGCCAAGCGTCGTGCGCTTTTGATATGAGATAAGTG
GTTTCGTTTCCCCAATGGAAAAGATTCAACTCAGGTTTTAAACTAAATGT
TTCCCTCAAAGTTTTTCTTAGAATGTGCTTTGAGTATTAAGTTCATTAGG
GAGTGGTCAGAAAGTATCTACTAGGGGGATGGAGGATTCTAGGGGTATGA
AAAGTTTTTCCCACCCTTAGGGGAGGGTCTGAAAAATATTCATGTCTTTA
GGGGGGTTCTTTATTAGAAAGGATAGGGGCGAAAAATATCTTGACTGGTT
AGAGGGTTTGAATTTATTTTGAGGATATCAAGGGGGGGGTGCAAATTATT
TTTGGAATTTTTGAAAATATCCTCCATCCCACCCTACTATAATCAGCGCC
GAAATATTTGGCACAAAAGGGGAATTCAAAAATGTTCCAATAATAAGGCT
GACAATATAGCCTGGAAGCCACTTAACCCCTCCCAAATCGAAAAATCCAA
TGAAGCAAAGTGGAAGTACTGAAATTGCAATTCTCGCCCGACCTTTAAAT
TCTGAAAAACGTTAAAATACCTAAAATTGCCAATATATCTCGGCGCTGAT
TATAGATACCTTCTGACTACTCCCTTAGGAAAAGTTTTTGATGAAATTAC
ATTATGACTGTCTTACATTTCAGTGCTTGTTGCTGGTAAAGGTTGTGAGT
GTGTCACGTGTCAACCGATTAGTTTAAAGACAGGTAATTTGTTTTGATAG
AATTTCCCGGGTACTAAAATCTCGGATTGAGGTCATCCCTGAGTATTTCC
ATGGTCTTTGTGTCTTTTAACTACCTATGGCTATTTGTTGGTGAAATATC
CTTACTAATTGTCATCGTTATCAATAAACATTTTAAACTTGTCCTTGGAA
CGTTCT

Coding sequence (CDS) from alignment at scaffold_243:186148..198603-

>TCONS_00054599 ID=TCONS_00054599|Name=TCONS_00054599|organism=Clytia hemisphaerica|type=CDS|length=6096bp|location=Sequence derived from alignment at scaffold_243:186148..198603- (Clytia hemisphaerica)
TGCTTGTTGCTGGTAAAGGTTGTGAGTGTGTCACGTGTCAACCGATTAGT
TTAACCGTCAAATAACCTGTTCAATCCTGTTTGGGAACGAAGCACTTTCA
CTTTCGATTTATCGTTACCCTCAATGATCTTTTGTGGTCAGTTTGTTGAA
AGTGAACATTTTACAGACCTACCAGTTGCTATAGAGATGGAAATTATCGG
CGCCGTAGAAAAAGATTGTCAATCTTTTTACACTGAGGATCTACATATCA
CCCTCAGATGACGAAACCGGCTACCGGTGATTTTTCACAAAGAATGAAAA
TCGAGATAATGGATTTTATATAAACGATGGACTCTTCATAAAATCTAATG
GCACTGGATACGTTTTCAAGCCGTCACAGATGACAACAAAAGAGATGATC
TATTTGACACAACGCAAATTTATTCGAACATATCCCAAAGCATCACGGGT
AGATTCATCAAATTACAATCCTATGTTGTCATGGAGACACGGAATACAAA
TGGCTGCAATCAATGTTCAAAAACCTGGCTTCCAACGAAGAAAAGACTGG
GGATAGCGAACAGGTTCAAATCCCTTTCGAAGCTTCCATGGCACGCCTTA
TTGTGTATTGTATAAGTGTACCTTATAAACATGGGGAAACCAACCCCAAC
TGTTGTGAAATGCATTATTTTAGTGAAAACCAAATTTCAACACTGGTTGA
AAAATGTCCCTTAGATGACGTCATTCAACAGTCCTTCACAACATTCTCCA
AAGATGAATGAGTGCTTGTTGCTGGTAAAGGTTGTGAGTGTGTCACGTGT
CAACCGATTAGTTTAACCGTCAAATAACCTGTTCAATCCTGTTTGGGAAC
GAAGCACTTTCACTTTCGATTTATCGTTACCCTCAATGATCTTTTGTGGT
CAGTTTGTTGAAAGTGAACATTTTACAGACCTACCAGTTGCTATAGAGAT
GGAAATTATCGGCGCCGTAGAAAAAGATTGTCAATCTTTTTACACTGAGG
ATCTACATATCACCCTCAGATGACGAAACCGGCTACCGGTGATTTTTCAC
AAAGAATGAAAATCGAGATAATGGATTTTATATAAACGATGGACTCTTCA
TAAAATCTAATGGCACTGGATACGTTTTCAAGCCGTCACAGATGACAACA
AAAGAGATGATCTATTTGACACAACGCAAATTTATTCGAACATATCCCAA
AGCATCACGGGTAGATTCATCAAATTACAATCCTATGTTGTCATGGAGAC
ACGGAATACAAATGGCTGCAATCAATGTTCAAAAACCTGGCTTCCAACGA
AGAAAAGACTGGGGATAGCGAACAGGTTCAAATCCCTTTCGAAGCTTCCA
TGGCACGCCTTATTGTGTATTGTATAAGTGTACCTTATAAACATGGGGAA
ACCAACCCCAACTGTTGTGAAATGCATTATTTTAGTGAAAACCAAATTTC
AACACTGGTTGAAAAATGTCCCTTAGATGACGTCATTCAACAGTCCTTCA
CAACATTCTCCAAAGATGAATGAGTGCTTGTTGCTGGTAAAGGTTGTGAG
TGTGTCACGTGTCAACCGATTAGTTTAACCGTCAAATAACCTGTTCAATC
CTGTTTGGGAACGAAGCACTTTCACTTTCGATTTATCGTTACCCTCAATG
ATCTTTTGTGGTCAGTTTGTTGAAAGTGAACATTTTACAGACCTACCAGT
TGCTATAGAGATGGAAATTATCGGCGCCGTAGAAAAAGATTGTCAATCTT
TTTACACTGAGGATCTACATATCACCCTCAGATGACGAAACCGGCTACCG
GTGATTTTTCACAAAGAATGAAAATCGAGATAATGGATTTTATATAAACG
ATGGACTCTTCATAAAATCTAATGGCACTGGATACGTTTTCAAGCCGTCA
CAGATGACAACAAAAGAGATGATCTATTTGACACAACGCAAATTTATTCG
AACATATCCCAAAGCATCACGGGTAGATTCATCAAATTACAATCCTATGT
TGTCATGGAGACACGGAATACAAATGGCTGCAATCAATGTTCAAAAACCT
GGCTTCCAACGAAGAAAAGACTGGGGATAGCGAACAGGTTCAAATCCCTT
TCGAAGCTTCCATGGCACGCCTTATTGTGTATTGTATAAGTGTACCTTAT
AAACATGGGGAAACCAACCCCAACTGTTGTGAAATGCATTATTTTAGTGA
AAACCAAATTTCAACACTGGTTGAAAAATGTCCCTTAGATGACGTCATTC
AACAGTCCTTCACAACATTCTCCAAAGATGAATGAGTGCTTGTTGCTGGT
AAAGGTTGTGAGTGTGTCACGTGTCAACCGATTAGTTTAACCGTCAAATA
ACCTGTTCAATCCTGTTTGGGAACGAAGCACTTTCACTTTCGATTTATCG
TTACCCTCAATGATCTTTTGTGGTCAGTTTGTTGAAAGTGAACATTTTAC
AGACCTACCAGTTGCTATAGAGATGGAAATTATCGGCGCCGTAGAAAAAG
ATTGTCAATCTTTTTACACTGAGGATCTACATATCACCCTCAGATGACGA
AACCGGCTACCGGTGATTTTTCACAAAGAATGAAAATCGAGATAATGGAT
TTTATATAAACGATGGACTCTTCATAAAATCTAATGGCACTGGATACGTT
TTCAAGCCGTCACAGATGACAACAAAAGAGATGATCTATTTGACACAACG
CAAATTTATTCGAACATATCCCAAAGCATCACGGGTAGATTCATCAAATT
ACAATCCTATGTTGTCATGGAGACACGGAATACAAATGGCTGCAATCAAT
GTTCAAAAACCTGGCTTCCAACGAAGAAAAGACTGGGGATAGCGAACAGG
TTCAAATCCCTTTCGAAGCTTCCATGGCACGCCTTATTGTGTATTGTATA
AGTGTACCTTATAAACATGGGGAAACCAACCCCAACTGTTGTGAAATGCA
TTATTTTAGTGAAAACCAAATTTCAACACTGGTTGAAAAATGTCCCTTAG
ATGACGTCATTCAACAGTCCTTCACAACATTCTCCAAAGATGAATGAGTG
CTTGTTGCTGGTAAAGGTTGTGAGTGTGTCACGTGTCAACCGATTAGTTT
AACCGTCAAATAACCTGTTCAATCCTGTTTGGGAACGAAGCACTTTCACT
TTCGATTTATCGTTACCCTCAATGATCTTTTGTGGTCAGTTTGTTGAAAG
TGAACATTTTACAGACCTACCAGTTGCTATAGAGATGGAAATTATCGGCG
CCGTAGAAAAAGATTGTCAATCTTTTTACACTGAGGATCTACATATCACC
CTCAGATGACGAAACCGGCTACCGGTGATTTTTCACAAAGAATGAAAATC
GAGATAATGGATTTTATATAAACGATGGACTCTTCATAAAATCTAATGGC
ACTGGATACGTTTTCAAGCCGTCACAGATGACAACAAAAGAGATGATCTA
TTTGACACAACGCAAATTTATTCGAACATATCCCAAAGCATCACGGGTAG
ATTCATCAAATTACAATCCTATGTTGTCATGGAGACACGGAATACAAATG
GCTGCAATCAATGTTCAAAAACCTGGCTTCCAACGAAGAAAAGACTGGGG
ATAGCGAACAGGTTCAAATCCCTTTCGAAGCTTCCATGGCACGCCTTATT
GTGTATTGTATAAGTGTACCTTATAAACATGGGGAAACCAACCCCAACTG
TTGTGAAATGCATTATTTTAGTGAAAACCAAATTTCAACACTGGTTGAAA
AATGTCCCTTAGATGACGTCATTCAACAGTCCTTCACAACATTCTCCAAA
GATGAATGAGTGCTTGTTGCTGGTAAAGGTTGTGAGTGTGTCACGTGTCA
ACCGATTAGTTTAACCGTCAAATAACCTGTTCAATCCTGTTTGGGAACGA
AGCACTTTCACTTTCGATTTATCGTTACCCTCAATGATCTTTTGTGGTCA
GTTTGTTGAAAGTGAACATTTTACAGACCTACCAGTTGCTATAGAGATGG
AAATTATCGGCGCCGTAGAAAAAGATTGTCAATCTTTTTACACTGAGGAT
CTACATATCACCCTCAGATGACGAAACCGGCTACCGGTGATTTTTCACAA
AGAATGAAAATCGAGATAATGGATTTTATATAAACGATGGACTCTTCATA
AAATCTAATGGCACTGGATACGTTTTCAAGCCGTCACAGATGACAACAAA
AGAGATGATCTATTTGACACAACGCAAATTTATTCGAACATATCCCAAAG
CATCACGGGTAGATTCATCAAATTACAATCCTATGTTGTCATGGAGACAC
GGAATACAAATGGCTGCAATCAATGTTCAAAAACCTGGCTTCCAACGAAG
AAAAGACTGGGGATAGCGAACAGGTTCAAATCCCTTTCGAAGCTTCCATG
GCACGCCTTATTGTGTATTGTATAAGTGTACCTTATAAACATGGGGAAAC
CAACCCCAACTGTTGTGAAATGCATTATTTTAGTGAAAACCAAATTTCAA
CACTGGTTGAAAAATGTCCCTTAGATGACGTCATTCAACAGTCCTTCACA
ACATTCTCCAAAGATGAATGAGTGCTTGTTGCTGGTAAAGGTTGTGAGTG
TGTCACGTGTCAACCGATTAGTTTAACCGTCAAATAACCTGTTCAATCCT
GTTTGGGAACGAAGCACTTTCACTTTCGATTTATCGTTACCCTCAATGAT
CTTTTGTGGTCAGTTTGTTGAAAGTGAACATTTTACAGACCTACCAGTTG
CTATAGAGATGGAAATTATCGGCGCCGTAGAAAAAGATTGTCAATCTTTT
TACACTGAGGATCTACATATCACCCTCAGATGACGAAACCGGCTACCGGT
GATTTTTCACAAAGAATGAAAATCGAGATAATGGATTTTATATAAACGAT
GGACTCTTCATAAAATCTAATGGCACTGGATACGTTTTCAAGCCGTCACA
GATGACAACAAAAGAGATGATCTATTTGACACAACGCAAATTTATTCGAA
CATATCCCAAAGCATCACGGGTAGATTCATCAAATTACAATCCTATGTTG
TCATGGAGACACGGAATACAAATGGCTGCAATCAATGTTCAAAAACCTGG
CTTCCAACGAAGAAAAGACTGGGGATAGCGAACAGGTTCAAATCCCTTTC
GAAGCTTCCATGGCACGCCTTATTGTGTATTGTATAAGTGTACCTTATAA
ACATGGGGAAACCAACCCCAACTGTTGTGAAATGCATTATTTTAGTGAAA
ACCAAATTTCAACACTGGTTGAAAAATGTCCCTTAGATGACGTCATTCAA
CAGTCCTTCACAACATTCTCCAAAGATGAATGAGTGCTTGTTGCTGGTAA
AGGTTGTGAGTGTGTCACGTGTCAACCGATTAGTTTAACCGTCAAATAAC
CTGTTCAATCCTGTTTGGGAACGAAGCACTTTCACTTTCGATTTATCGTT
ACCCTCAATGATCTTTTGTGGTCAGTTTGTTGAAAGTGAACATTTTACAG
ACCTACCAGTTGCTATAGAGATGGAAATTATCGGCGCCGTAGAAAAAGAT
TGTCAATCTTTTTACACTGAGGATCTACATATCACCCTCAGATGACGAAA
CCGGCTACCGGTGATTTTTCACAAAGAATGAAAATCGAGATAATGGATTT
TATATAAACGATGGACTCTTCATAAAATCTAATGGCACTGGATACGTTTT
CAAGCCGTCACAGATGACAACAAAAGAGATGATCTATTTGACACAACGCA
AATTTATTCGAACATATCCCAAAGCATCACGGGTAGATTCATCAAATTAC
AATCCTATGTTGTCATGGAGACACGGAATACAAATGGCTGCAATCAATGT
TCAAAAACCTGGCTTCCAACGAAGAAAAGACTGGGGATAGCGAACAGGTT
CAAATCCCTTTCGAAGCTTCCATGGCACGCCTTATTGTGTATTGTATAAG
TGTACCTTATAAACATGGGGAAACCAACCCCAACTGTTGTGAAATGCATT
ATTTTAGTGAAAACCAAATTTCAACACTGGTTGAAAAATGTCCCTTAGAT
GACGTCATTCAACAGTCCTTCACAACATTCTCCAAAGATGAATGAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034408XLOC_034408Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054599-exon-scaffold_243-1575043694:198501..198603TCONS_00054599-exon-scaffold_243-1575043694:198501..198603Clytia hemisphaericaexon
TCONS_00054599-exon-scaffold_243-1575043694:192662..192712TCONS_00054599-exon-scaffold_243-1575043694:192662..192712Clytia hemisphaericaexon
TCONS_00054599-exon-scaffold_243-1575043694:191617..191664TCONS_00054599-exon-scaffold_243-1575043694:191617..191664Clytia hemisphaericaexon
TCONS_00054599-exon-scaffold_243-1575043694:190818..191004TCONS_00054599-exon-scaffold_243-1575043694:190818..191004Clytia hemisphaericaexon
TCONS_00054599-exon-scaffold_243-1575043694:189733..189867TCONS_00054599-exon-scaffold_243-1575043694:189733..189867Clytia hemisphaericaexon
TCONS_00054599-exon-scaffold_243-1575043694:189145..189231TCONS_00054599-exon-scaffold_243-1575043694:189145..189231Clytia hemisphaericaexon
TCONS_00054599-exon-scaffold_243-1575043694:188195..188262TCONS_00054599-exon-scaffold_243-1575043694:188195..188262Clytia hemisphaericaexon
TCONS_00054599-exon-scaffold_243-1575043694:187902..188012TCONS_00054599-exon-scaffold_243-1575043694:187902..188012Clytia hemisphaericaexon
TCONS_00054599-exon-scaffold_243-1575043694:187572..187643TCONS_00054599-exon-scaffold_243-1575043694:187572..187643Clytia hemisphaericaexon
TCONS_00054599-exon-scaffold_243-1575043694:186148..186380TCONS_00054599-exon-scaffold_243-1575043694:186148..186380Clytia hemisphaericaexon
TCONS_00054599-exon-scaffold_243-1510915933:198501..198603TCONS_00054599-exon-scaffold_243-1510915933:198501..198603Clytia hemisphaericaexon
TCONS_00054599-exon-scaffold_243-1510915933:192662..192712TCONS_00054599-exon-scaffold_243-1510915933:192662..192712Clytia hemisphaericaexon
TCONS_00054599-exon-scaffold_243-1510915933:191617..191664TCONS_00054599-exon-scaffold_243-1510915933:191617..191664Clytia hemisphaericaexon
TCONS_00054599-exon-scaffold_243-1510915933:190818..191004TCONS_00054599-exon-scaffold_243-1510915933:190818..191004Clytia hemisphaericaexon
TCONS_00054599-exon-scaffold_243-1510915933:189733..189867TCONS_00054599-exon-scaffold_243-1510915933:189733..189867Clytia hemisphaericaexon
TCONS_00054599-exon-scaffold_243-1510915933:189145..189231TCONS_00054599-exon-scaffold_243-1510915933:189145..189231Clytia hemisphaericaexon
TCONS_00054599-exon-scaffold_243-1510915933:188195..188262TCONS_00054599-exon-scaffold_243-1510915933:188195..188262Clytia hemisphaericaexon
TCONS_00054599-exon-scaffold_243-1510915933:187902..188012TCONS_00054599-exon-scaffold_243-1510915933:187902..188012Clytia hemisphaericaexon
TCONS_00054599-exon-scaffold_243-1510915933:187572..187643TCONS_00054599-exon-scaffold_243-1510915933:187572..187643Clytia hemisphaericaexon
TCONS_00054599-exon-scaffold_243-1510915933:186148..186380TCONS_00054599-exon-scaffold_243-1510915933:186148..186380Clytia hemisphaericaexon
TCONS_00054599-exon-scaffold_243-1491911889:198501..198603TCONS_00054599-exon-scaffold_243-1491911889:198501..198603Clytia hemisphaericaexon
TCONS_00054599-exon-scaffold_243-1491911889:192662..192712TCONS_00054599-exon-scaffold_243-1491911889:192662..192712Clytia hemisphaericaexon
TCONS_00054599-exon-scaffold_243-1491911889:191617..191664TCONS_00054599-exon-scaffold_243-1491911889:191617..191664Clytia hemisphaericaexon
TCONS_00054599-exon-scaffold_243-1491911889:190818..191004TCONS_00054599-exon-scaffold_243-1491911889:190818..191004Clytia hemisphaericaexon
TCONS_00054599-exon-scaffold_243-1491911889:189733..189867TCONS_00054599-exon-scaffold_243-1491911889:189733..189867Clytia hemisphaericaexon
TCONS_00054599-exon-scaffold_243-1491911889:189145..189231TCONS_00054599-exon-scaffold_243-1491911889:189145..189231Clytia hemisphaericaexon
TCONS_00054599-exon-scaffold_243-1491911889:188195..188262TCONS_00054599-exon-scaffold_243-1491911889:188195..188262Clytia hemisphaericaexon
TCONS_00054599-exon-scaffold_243-1491911889:187902..188012TCONS_00054599-exon-scaffold_243-1491911889:187902..188012Clytia hemisphaericaexon
TCONS_00054599-exon-scaffold_243-1491911889:187572..187643TCONS_00054599-exon-scaffold_243-1491911889:187572..187643Clytia hemisphaericaexon
TCONS_00054599-exon-scaffold_243-1491911889:186148..186380TCONS_00054599-exon-scaffold_243-1491911889:186148..186380Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054599-proteinTCONS_00054599-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_243supercontigscaffold_243:186148..198603 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.5976	2.78725	1.81593	2.3604	1.30865	1.09003	1.03792	1.82317	2.85884	1.36066	3.03945	4.53144	2.59808	1.59604	3.20485	5.29247	3.29837	4.61609	6.37241	5.99243	6.6536	5.9318	3.72061	6.08167	0	0	7.3133	4.32555	4.91535	2.59059
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001192PI-PLC_fam
IPR001711PLipase_C_Pinositol-sp_Y
IPR017946PLC-like_Pdiesterase_TIM-brl
Vocabulary: Biological Process
TermDefinition
GO:0035556intracellular signal transduction
GO:0007165signal transduction
GO:0006629lipid metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004435phosphatidylinositol phospholipase C activity
GO:0008081phosphoric diester hydrolase activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0035556 intracellular signal transduction
biological_process GO:0006629 lipid metabolic process
biological_process GO:0007165 signal transduction
molecular_function GO:0004435 phosphatidylinositol phospholipase C activity
molecular_function GO:0008081 phosphoric diester hydrolase activity
Blast
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BLAST of TCONS_00054599 vs. Swiss-Prot (Human)
Match: PLCB3 (1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-3 OS=Homo sapiens GN=PLCB3 PE=1 SV=2)

HSP 1 Score: 103.605 bits (257), Expect = 9.919e-24
Identity = 68/233 (29.18%), Postives = 111/233 (47.64%), Query Frame = 2 
Query:  179 QHSPKMNEASNEEKTGDSEQVQIPFEASMARLIVYCISVPYKHGET---NPNCCEMHYFSENQISTLVEKCPLEMIYLTQRKFIRTYPKASRVDSSNYNPMLSWRHGIQMAAINVQKPDNGFYINDGLFIKSNGTGYVFKPSQMTTKGSTYHPQMTKPATGDFSQRMKIEIFCGQFVESEHFTDLPVAIEMEIIGAVEKDCQSFYTEPSN-NLFNPVWERSTFTF-DLSLPSM 862
            Q  PK  + + +E T  SE   +     M+ L+ Y   V +K  E       C EM  F E +    + K P+E +   +++  R YPK +RVDSSNY P L W  G Q+ A+N Q  D    +N G+F  +  +GY+ KP  M     ++ P       G  +  +++++  GQF+       + + +E+++ G      + + T  S  N FNPVW+   F F  + LP++
Sbjct:  567 QTDPK--KPTTDEGTASSE---VNATEEMSTLVNYIEPVKFKSFEAARKRNKCFEMSSFVETKAMEQLTKSPMEFVEYNKQQLSRIYPKGTRVDSSNYMPQLFWNVGCQLVALNFQTLDVAMQLNAGVFEYNGRSGYLLKPEFMRRPDKSFDPFTEVIVDGIVANALRVKVISGQFLSDR---KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTL 791
The following BLAST results are available for this feature:
BLAST of TCONS_00054599 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
PLCB39.919e-2429.181-phosphatidylinositol 4,5-bisphosphate phosphodie... [more]
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