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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00054817 ID=TCONS_00054817|Name=TCONS_00054817|organism=Clytia hemisphaerica|type=transcript|length=367bp
CTATTCagttaaatttttatatttttaggaGAAAACATTCAAATCATATC
TTGGTACTGGAAATGATCAACCTAGGATCTTGTAGTGGTAAAGAAAATTG
ATGATGAAATTGGTGAGAGGATATCAGTCGAAACGGCAGAACAGAGGGAG
ACAGATTATGAGAAAATTGGCATTGGATGCTACATATATTTCGGCATAAA
GGAAAAAGATCATTATTTCTGGTATGAACCTTTTCAAACTTTATTACCAA
CTTGAAACACGTTTCCCTTTTTATTTGCTGATGATAGTGATGCCTGTCCA
TGAAATTGACCTCGTGGCTTTGAAGTTCAATCTATAATATCATTAGGCGT
ACAATTTGCAAAATTCC Run BLAST on NCBI transcript from alignment at scaffold_245:421899..423241- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00054817 ID=TCONS_00054817|Name=TCONS_00054817|organism=Clytia hemisphaerica|type=transcript|length=1343bp|location=Sequence derived from alignment at scaffold_245:421899..423241- (Clytia hemisphaerica)
CTATTCAGTTAAATTTTTATATTTTTAGGAGAAAACATTCAAATCATATC
TTGGTACTGGAAATGATCAACCTAGGATCTTGTAGTGGTAAAGAAAATTG
ATGATGAAATTGGTAAGATATCATTCTTTGATAATCTTCTTTGATAAGTG
CCATTGAATTTGAATGAAATTTTAAGGACTGTTTTTACACTTGATGAATT
GTCTTTAAAAGTGTCATATACTTCGAATAAAGAATGGTCATTTTTTATAT
AATATATTGAATTTACAATATTTCGACCTCCTTGGTGATCTTTTTTTTAA
TTTTTCCATTGTTAAAAAAATATATTTTCTGAAAGCTAATAAAATCCTCT
TTAAGATGGTGTAGGTTATTAAAGGATATAAAATTTAGAGGAAAACGAAA
TGTGTCAATTTCCGGGTACCACTACATTCACTTTTCAAAAATAATTATTA
CATAGATGATCTTGTAAAAGAAAGGTTGCTCTAAAAAAGCTTGCCTGCCT
TTTGAATAAGGTCCCAGAAAAAAGATTACTGACAAAAATTCATGAATATT
AAATCCAGACCCTCAAAAGATATTTTTCTCAGACTTTTGTTAGTACGCAT
ACTCATTCTTTGTACTTTTATTGGCTAAAGAAACTTATGTTCTTATGTTT
ATTGTACTTCCCTGTCTCTGTGACCCAGTGAGATCCACCCACTGGCCACC
CCAGTGGAAAAATGACTCAAAAAAGGCCCATTATTTTGCCCCATTGGAAA
AAAATAGTCACCTCACTGGAAACTCGGGTTTTCTCTCTCACCCTAGTGGT
AAGATTCAAAATGTAAAAAAGCCACCCTGGCACTGAAAATATGGTAAAAT
AATATAGAACTTTATAACCCCAGTGGAAAAACAGAACCGTTTGACCCACC
CAAGTGGGTTTGAAAGATTCACCCCAACTGATCTTTTGGTACTCACTGTT
GAGAGACGATTGTGCTTTAACAAAGAAGATTATTTTAAATCATATCTTCA
AGTTATGTATAGCATGAGTTTACATCTTCTGAGAGTCAATTTATGCTGAA
TAACCCTACCCCAGGCTACTTTTCACCATTTCTTTTAGGTGAGAGGATAT
CAGTCGAAACGGCAGAACAGAGGGAGACAGATTATGAGAAAATTGGCATT
GGATGCTACATATATTTCGGCATAAAGGAAAAAGATCATTATTTCTGGTA
TGAACCTTTTCAAACTTTATTACCAACTTGAAACACGTTTCCCTTTTTAT
TTGCTGATGATAGTGATGCCTGTCCATGAAATTGACCTCGTGGCTTTGAA
GTTCAATCTATAATATCATTAGGCGTACAATTTGCAAAATTCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00054817-exon-scaffold_245-1575043694:423130..423241 | TCONS_00054817-exon-scaffold_245-1575043694:423130..423241 | Clytia hemisphaerica | exon |
| TCONS_00054817-exon-scaffold_245-1575043694:421899..422153 | TCONS_00054817-exon-scaffold_245-1575043694:421899..422153 | Clytia hemisphaerica | exon |
| TCONS_00054817-exon-scaffold_245-1510915933:423130..423241 | TCONS_00054817-exon-scaffold_245-1510915933:423130..423241 | Clytia hemisphaerica | exon |
| TCONS_00054817-exon-scaffold_245-1510915933:421899..422153 | TCONS_00054817-exon-scaffold_245-1510915933:421899..422153 | Clytia hemisphaerica | exon |
| TCONS_00054817-exon-scaffold_245-1491911889:423130..423241 | TCONS_00054817-exon-scaffold_245-1491911889:423130..423241 | Clytia hemisphaerica | exon |
| TCONS_00054817-exon-scaffold_245-1491911889:421899..422153 | TCONS_00054817-exon-scaffold_245-1491911889:421899..422153 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_245 | supercontig | scaffold_245:421899..423241 - |
Blast
The following BLAST results are available for this feature:
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