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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00054889 ID=TCONS_00054889|Name=TCONS_00054889|organism=Clytia hemisphaerica|type=transcript|length=1238bp
cgagcatttactttcgcgaacatttactttcgcgaattgccctttcaaga
attttcaaatacatttactttcgcgaaaagggccaaaattcgcgaaaatc
gcgaaagtttctgttcgcgaaagtttctacgcctaaagtaaaaAATACTT
TTACGTTCTATTCCAAACTTCAAATGTTGTTAATACATATTAAAATGAAG
GTCAGTATAAAGTTTCATGAACTGAATGCAAGTATAAGAAAAGTTACGGG
taacggaaaaaaaaatttccgataaGACAAAAATTATGAAGTTTTCGGGC
CGCAGTGTAAAAAATACTTTTACGTTCTATTCCAAACTTCAAATGCTGTT
AATACATATTAAAATGAAGGTCAATATAAAGTTTCATGAACTGAATGCAA
GTATAAGAAAAGTTACGGgtgacggaaaaaaaaatttccgataagacaaa
aattataaagtttttggGCCGCAgtgtaaaaaaatacttctacGTTCTAT
TCCAAACTTCAAATGCTGTTAATACATATTAAAATGAAGGTCAATATAAA
GTTTCATGAACTGAATGCAAGTATAAGAAAAGTTACGGgtcacagaaaaa
aaattttccgataaGACAAAAATTATAAAGTTCTCGGGCCGCAgtgtaaa
aaaatacttttacgTTCTATTCCAAACTTCAAACGCTNTGATAGCAATGA
TCTTAGGTTTGGGAATATGTATCTGtatatctttcattttttaggGATTT
CTGAAATACTTATTTCTCTTAATTTCTTTCATTCAGCCACAAAACTGCCA
GTGCACACGCTACATTCATGTTCGAATCGTGCAGCACAAGTCAAACCTGA
TGAAATTGGGTTATTCGTGCAGGAAAACAAAAGCAAGGTGGTGGATCTGG
CAACTGGGAAACTCACTTCGTTCCGTTATGATATTTACAGCAGGAGTAAA
CGGCAATACTTTCAAAATATGGTATGTAACGTCTTTTTTTTATGTGCTAA
TATCTTCTGATACAATGTGATACCCAATTCTCTCAACTATTCAGCCACAT
CATTAAAGCTTTTTGTATGGTCTTTGTTTGCAAAAAGTAGAACATTTGGT
ACTCAAACAGAAGCCtactttccaaaaaaaggctatcacataaaaataaa
gtcttgTACTTTCTTTCTGACTAAGAAAATCCAGTTTCCTTCAACCAAAT
CAAAGCATAGCAAGCACATCGACATCTTCGATTCTTCC Run BLAST on NCBI transcript from alignment at scaffold_245:900795..902032 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00054889 ID=TCONS_00054889|Name=TCONS_00054889|organism=Clytia hemisphaerica|type=transcript|length=1238bp|location=Sequence derived from alignment at scaffold_245:900795..902032 (Clytia hemisphaerica)
GGAAGAATCGAAGATGTCGATGTGCTTGCTATGCTTTGATTTGGTTGAAG
GAAACTGGATTTTCTTAGTCAGAAAGAAAGTAcaagactttatttttatg
tgatagcctttttttggaaagtaGGCTTCTGTTTGAGTACCAAATGTTCT
ACTTTTTGCAAACAAAGACCATACAAAAAGCTTTAATGATGTGGCTGAAT
AGTTGAGAGAATTGGGTATCACATTGTATCAGAAGATATTAGCACATAAA
AAAAAGACGTTACATACCATATTTTGAAAGTATTGCCGTTTACTCCTGCT
GTAAATATCATAACGGAACGAAGTGAGTTTCCCAGTTGCCAGATCCACCA
CCTTGCTTTTGTTTTCCTGCACGAATAACCCAATTTCATCAGGTTTGACT
TGTGCTGCACGATTCGAACATGAATGTAGCGTGTGCACTGGCAGTTTTGT
GGCTGAATGAAAGAAATTAAGAGAAATAAGTATTTCAGAAATCcctaaaa
aatgaaagatataCAGATACATATTCCCAAACCTAAGATCATTGCTATCA
NAGCGTTTGAAGTTTGGAATAGAAcgtaaaagtatttttttacacTGCGG
CCCGAGAACTTTATAATTTTTGTCttatcggaaaattttttttctgtgac
CCGTAACTTTTCTTATACTTGCATTCAGTTCATGAAACTTTATATTGACC
TTCATTTTAATATGTATTAACAGCATTTGAAGTTTGGAATAGAACgtaga
agtatttttttacacTGCGGCccaaaaactttataatttttgtcttatcg
gaaatttttttttccgtcacCCGTAACTTTTCTTATACTTGCATTCAGTT
CATGAAACTTTATATTGACCTTCATTTTAATATGTATTAACAGCATTTGA
AGTTTGGAATAGAACGTAAAAGTATTTTTTACACTGCGGCCCGAAAACTT
CATAATTTTTGTCttatcggaaatttttttttccgttaCCCGTAACTTTT
CTTATACTTGCATTCAGTTCATGAAACTTTATACTGACCTTCATTTTAAT
ATGTATTAACAACATTTGAAGTTTGGAATAGAACGTAAAAGTATTtttta
ctttaggcgtagaaactttcgcgaacagaaactttcgcgattttcgcgaa
ttttggcccttttcgcgaaagtaaatgtatttgaaaattcttgaaagggc
aattcgcgaaagtaaatgttcgcgaaagtaaatgctcg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00054889-exon-scaffold_245-1491911889:900795..902032 | TCONS_00054889-exon-scaffold_245-1491911889:900795..902032 | Clytia hemisphaerica | exon |
| TCONS_00054889-exon-scaffold_245-1510915933:900795..902032 | TCONS_00054889-exon-scaffold_245-1510915933:900795..902032 | Clytia hemisphaerica | exon |
| TCONS_00054889-exon-scaffold_245-1575043694:900795..902032 | TCONS_00054889-exon-scaffold_245-1575043694:900795..902032 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_245 | supercontig | scaffold_245:900795..902032 . |
Blast
The following BLAST results are available for this feature:
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