TCONS_00054939 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054939
Unique NameTCONS_00054939
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2609

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054939 ID=TCONS_00054939|Name=TCONS_00054939|organism=Clytia hemisphaerica|type=transcript|length=2609bp
agtgTCGTCAATCGGTAAAATCACACTTGACAACAAACAACCccccaaaa
caaaacaaaagcaagCAAAACAAATTGTTTCACCAAAACAATACATATTT
CCTGATTATGCTCATGTTAATGGAGACTGGAATCGAAAAAAGGATGTTAT
AACATTACCCAAAAATCTCTTCGACAAAGATCGTTTGACAATGGTTTCAA
GTGTTGTTTACAAATCGTTGAGCCAACTATTACCACATCGATGGAAGTCA
CAAAAGTTTGTCACATTTACTGACGGGTTTGTTGTCAATAGCAACATATT
GTCATGCATAGTGGAGCCCAAACCTCTGAAAGTGCTCGTATCACCAGTCA
TAATTACACTTCATCATCTAAAGGAACAACATTTGGATCGCTCAAAATGT
GTTTGGTGGGACTTCAATAACAGCGGAGGCAGCTGGTCTACTGAAGGTTG
TGAAGTTATCACCAGCAACAGAACGGTCACTGTTTGTCAATGCCATCATC
TCACACATTTTGCCATCCTAAGCAGTACTAAAGAGGAGAAGatttcAGCC
AAGGAAGAGATCAAAGAGCACACAATGGCAATAATGTGGCTTGGTATACC
ATTGATGATTGTGCTCACATTGGGTGTTCTTTACACTTGCTTTTCATGGT
CGAAATCACCAAAGAAAAGTCAATCATCTTAGATAAGAAACCAGTCTTAC
CTAAAGACAATGTATTCACAACACAAGAAATTAATCAACGATATCGCGGC
TCACCTAAAAAGAATCTGTACGCAGCCAATCCTCAAAGACGACAACGACA
GAGCCGTTCATCAGAAAATCTATATgaaaatcgaacaaaaaaatcacctc
cTATAACTAAACCAAGTGAATGCATAccgaagcaaaattttttcgGAGGT
AGCAACCAAGCTAGCCATAATACTCCAAGCCCCTCAGATTTAGAATGGGA
GCACGCTTGGGATTGTTTGACCAACTCAGAGTTTGATACTAGAAACACTA
AAAGACTTCACGAAGAATTTAAAAGACAattgctgaaaaataaaatgatt
cgTCAGCAACGTTGCCTGCGTCGAAAGAACTCATCAGAAAGTTCGTCCTC
TTCTACGGATGCGATAAGTGAGATCTGTTCGCATGAGCGCAAACGTCGTG
GTGTATTCGAGAGATATTTTCGATGGAGAGCAGACGAGAAAATGGAATGG
TCGAAAGAAAAGATCAATTATAAAGTgatcaaagaagaaaaacaaaactt
gGTTTCACCAAATCAGGATCAAATGGAAAGCACGCAAGACCAAAAGCCTA
TCGGGCGCCATTTAAAGCCACCCTTGTCTTGCCACTCACCAAACAATACC
ATAAATGAAAGTGACCACCGACCTCTGTTCTCACCAGACGCTATAAGTTC
TCCTCACTCAATGAATGAATTCCCAGTTAGCAAAAACGTTGAAACTCCTT
ACATGGGTCAAACTCTCACAAACTCGAACCGCTATTTGCGAATTTCCTTT
GACGCTTTAGACGCGTGTACAGACTCTACTCTGGACTCGATTAATCAAAT
TGTATCAGACATCGAGACAAATTATGACGACTTATTGTTGGATTCCCAGC
AGAGATTACGTCTTCAACCTATACATCATCAAAAAATggctgacatcagc
attttTATTGAAAGTGATGATCCTACTACTCCGAATACACAACTGCGGGT
CAATGCAGGATCTTCAGAAGACACAGGTTATCAAACCTCACAAGCCAGCT
ATTGCGGTAGTAATTCTGAGGTCGATGTATCGTATGATCAAATCAAACTG
AAAAACACTGGCAAATATTTTAGAGACCATATCTTTACCCGGGAAGGTTT
CCAAGGCTTTCAATGCAACGAGTTTTGTTGTATAACATATATAGAACTTT
TATTTGTTTCCTTCgagacaaaagaaaaaggttacCAGTATGGGCGGAGG
TTGGATCTTGGGGGCGTATCTACAACTGACGTCTCTACAGATGAAGAGAG
TGACCACAAAAAGAGAATTTACAACTACAAACAGAGTAAAAATAAGAGAA
ACAGGTTCTCCAGTACCCAACCTTCTAGTGCAATGAAACCCTTAAGAAAA
CTTATGTTAGAGAACACAACAGTTACAGCTTCAGGTTGCCGTGTAAAACG
CTACAGCGCAAGAGAGTGCAAAGTCTCTCCAACACAGAGCGGAAATCGCA
ACCAAACACGACACATGAAGAGCTATATAGCTTTACGTCAACAATGTCGA
TTAAATGATGATTTGTCTCCATTATCCAAACACAAAGGACTTATACCGAA
CTTAAAATCACCTCTCGAAACGGCAGGTGCTATACGAAAATCTAAACTGA
AACGAAAGAAAGCCTTCAAAGTGTCAAGTGAGACGGATAATATCGGGAAA
GCGAGACAACGTATAATGAGACGGGAAAATCGAGGCAAACGAACATTGAG
CAGAGTTGATACTTCATCTGACTCATCGAGTTTGTCATCAGCAAACACGT
CATGGGACTCACTTGTTCAGacttaTCAATTAAGCGAAGGATCTTCTCTT
GAAAGCCATGAAATCGAAATGGAATGCAACAACAAGTTTGGAGATTGGTG
ATCTGCAAA
Run BLAST on NCBI

transcript from alignment at scaffold_247:54196..71571+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054939 ID=TCONS_00054939|Name=TCONS_00054939|organism=Clytia hemisphaerica|type=transcript|length=17376bp|location=Sequence derived from alignment at scaffold_247:54196..71571+ (Clytia hemisphaerica)
agtgTCGTCAATCGGTAAAATCACACTTGACAACAAACAACCccccaaaa
caaaacaaaagcaagCAAAACAAATTGTTTCACCAAAACAATACATATTT
CCTGATTATGCTCATGTTAATGGAGACTGGAATCGAAAAAAGGATGTTAT
AACATTACCCAAAAATCTCTTCGACAAAGGTAGTGAAACTTCTTTAATTT
AAAAACTAAACCGCtaaataaatatcaaaattagCTAAAACCAGCTCttt
cacacccctgtgtcacagacccgctgggaccctcgctgggaccccagccc
caccgaaagatttgactgaaatttcatCCCTGTCGgacaaaataccctac
aattttagccccactgggaaattaactttgatttcatccccattggtaat
tcaatgcaaaaatttgctGTCCGAAatcatccccactggatattTTAAGC
TCGGGAGCAATAGAACTTCTATCCTCATCGGGGTTTCGatggaaattttt
atccccactgtggaaaaaagttccaccggggctgtgagacaggggtgttc
ttaCAGATTCACATAGGCTTTCATGTTGACGAGCTTGGATTTCTCTAGTG
AGTAGTGAAACTTCTTTAATTTAAAAACCAAAACCACTAAAAGGTTCTAG
TTGGCACGCAAAGTTTCAACTTTAATCTTATGGAGATCAAATAGATGTTT
AGAGATAtattatataaaacactagacgGAGCTTTTCCGTTCCTAACTAA
AATAAAATCACACTCAAATCTTTAATAGATTGACTTCGCTTGCACgagac
ttgaaattttaaagtttcTACTTCTACAAGGTTTCTACTTATCAGGTCTA
CTTTCAGCAAATATGGTGCATTATTCCGCCTTGGCTAGGGAGAGATAGAG
TAGCTCTATTTAGTGTTTTATATTTGATATCAAGTGATGCTGTTTGCCAA
CTGAATTGTAGACTCTTCACATACATTTTATGAGTGAAACACTGGGTGTG
CTTGCAATGGGTTCGATTCTCTTTATTGCTTATCGCCAATCCCTAATATT
TTCCAAAGAGCTACTAGGGCTGGACAACGTTAGGTATGTACAGGCCAGAC
CTGTGAAAAGCGAGTAATTAGTGAGGTGAAAAGTGACCCTTAAAAAGACG
AttccgaaaaattatttttgcccttagagattttttttgacttctCATGG
TGTTCGTACTCTAAAAAGATCCAAAAGGGGGAAATCCCGAACTTTGTAAC
TATTTCAGCCTTTTCTTGTTTTGTAACTCGTGGAAAGTCttttgattggt
caaaaagaCCAACCCTTGCCGTCCTTACACCCAGCATCTGCTTCACCTAA
GTACCGCTAAAAAAGAGATTGACTTCGACTTTTCTTCATAGATCGTTTGA
CAATGGTTTCAAGTGTTGTTTACAAATCGTTGAGCCAACTATTACCACAT
CGATGGAAGTCACAAAAGTAAGTACATTAAAGTCTCCATagttcgaacct
ctataattcgaatgtctccataactcgaataagTTTCCTTCAGTCAACAA
AATCTCATGAACAAGTTTATGTTGCCCGtgagtgttcgagttatggagat
tcaGTTGTATCAATGCAAGGATACTGTATCCGATCTCTACACAAAATTCG
ATTACAAGCTGACATTAAAgcagggccggcgaatcaattttgaaagtgga
ggggccaaatagtaagtgtctaaaaaggcgccaccatggttggcgccgac
gggcctttcttagaaaaaaagtggggggccatggccccccggcCCCCCAG
TTTCGCCGGCCCTGTAAAGGAAGTTATAATGTAATCTCCGAGCATATGCT
GACTAATTTGCCCATGACACGTACTCGCCCTAAGGCCATGAGTTCGTAAG
GTTCTGATCCAATTGGTGGAGTTTTTCTATTCCACCTCTATGTAATCATT
TACACATATTTCTTTAAGGTTTGTCACATTTACTGACGGGTTTGTTGTCA
ATAGCAACATATTGTCATGCATAGTGGAGCCCAAACCTCTGAAAGTGCTC
GTATCACCAGTCATAATTACACTTCATCATCTAAAGGTAGGATAAACACC
AACTTGAAAGGCTGTCATAATTCCGGCATGAAGATTAGTTGCTTGTCCCA
ATTATCCACCTTATAAAACTATTTCATTTGTTAATAAAACTCATCATCAG
GGAAAAATCAGGAAACAAAAATTCGACAATATCCAACAATTTGCAAAAGT
ACTTTTGATCATTCCCTCTGGATATCCATCATTTCTAAAAATGCTTTATT
TGGAGTGCGTACCGAAGGATGACTACACTAAACAggctagactagcaaac
taatCTCTTAAAATAGGGGCTACGTTGGAGAGTGAGTAACTAGCTGGAGA
GAGGGAGTTGATTTCAGCCCCTCCCGTCGCTAAATTCTCTTCTTTCTATC
CCCATGTGGGATTTCGCTAGAAACTTTTATCCCTGTTATGGCGAAAAGTT
CCAGCGgggctatgagacaggggtgtctttttTGTCGTCAACTATATATC
GAATCATTCTTTTATTACAGGAACAACATTTGGATCGCTCAAAATGTGTT
TGGTGGGACTTCAATAACAGGTATTGACCAAATTAAGATAAAATTGATCT
CCAAAAACTTCTAACTTCTATCTGGCGATTAAAATAATCCAGAATCTAGT
CAAAACCTTCTGTAAATTTGCCTCAATTTATCAAAGGGGGTGTAttttgt
atttgttttcaaaaattggatcaagctaatttttaatcaatattagataa
aattcaaagaaattaaaatcGTGTCTAGCACAAATGCTAAACTCGTACAC
ATACAAAAGCAAATAAATTAGATCATAAAGTTGTGATCAGGATTTAACCA
AAAGAGAAGGACCTCAAAATTCTGATCCTTGATATCCAATACAATGCCAA
CAATTCAATCGATTCGAAGGATCATATTTACGTTTTAAACTTTCAAGTTG
TTCAAGATTATCTCCCCAAAACACTCTCCTCCATTCGAGTTCCGTTTTGC
TGCCGTGGTTGTAACATGAGCCTGAATCAGGCACCATTTGGTGAATAAGC
TTTAAGATACTATCATCAAAAGTATGGATCACCCAAAGAGCACCTCTCAT
GACCGGGTTGATCGATGTTTTGTCTTTTCCAACTCGGCTGACTTGTCATC
CTAGTAGATATTTGATAAATTAGCTAAAACCAGGTCTTACAAATTCACAT
AGGCTTTCATGTTGACAAGCTTGGATTTCtctctttcaaaaaaatctgga
aaatctACTACGTGTACCTCAAAAATTGGTTGAAAACTCCAAGCCAAATT
TAACAGGTTTCAGGGTGTATTTACAGACGTAGGCCTAGAACggccaaaaa
tgaccaaaaacaacaaaaatgaccttcaaaaatgaacttcaaaggACTGT
ACTTTTACATCCAAGAAAGATACGAAAAATCTGAACACAGATTTTAAAAT
CAACAACGTTTAAATTTTCTGAATAGCCTGAAgtcatgattaaaaaaaaa
atccagaaaaattcccttttctttattttcatttttcttcttcatttttc
atcctttaagcttttttcacatgcacgtaaaattttacttcagACCTTAC
GGAAAATCGTTCGTAAGACTGTCgtttgggaatttccccgacattatgta
gagtttttgttgattaaaaGGGTCTTACGTGAACTTTTTGAACGTAAACA
AACTCTACTTAAagccttaaaacactacgtaagcttagggaaattcccca
cccttcaaggtcttaagtaaaattttacgtacatgtgaaaaaagctttaa
attaatctccttggaaatatctttccaacgttgtataaccccgggggggg
gggggggtNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNgggggggggggggtacttagggaAATTCAC
GATTTTAGGGATTTTTCAAGTGATTGATTTcaagtgaaaaaattcaaatt
cgttGGTGAATGTCAGCAGCCAAAGCtcgagagcaaggaaaattttgttc
gaataacagagagatttgaattaAAGAAAGTCTTTTATAAGAGTGTATTT
CCTTGACGGGAACTGAGAATAAGCTCGAATTACAGAATTATTAAAAAGTA
GTCAAAATTCAAACTAGCGAGAGATCTCGGCAAAACCTCCAGTGTGACAC
GGGTAAAATATACCTAAATTTAAGACTAAAGTTAAAAAGGGTGTGTCAAA
CGATCCGAGTCCACTGGTAGCAAAAATGCGCAATCTATGTTATGTTTGAA
CGTATAGAAAGGCTAAGACACAAGAATTCTGACAAGTATGATCTCCACAg
tgagaaataaaaaaagaagtagTTATTTTAATTAGAACTTGTTACAAAAA
TGGAGATCAGAAAATCAATATTAGTCTCTATCTTCTAGATACGTGATATT
TGATCGCGTAATTCATTTCAAACATGAGCCATTCGACGTGAACCGTAGTC
GCAAGATTTTGTCGCGCTACTTTACGAcctttctctttttctctcttctt
cctctagactatgctatagtctaagacgagtttcatctaagacgaacaaa
cgtgaagacgggagtTTTTTCGGGGGTAGCTGTTGTCTACATTAATATAT
AATTCGTATTATTCATACCTTTCGCGGCATTTTTCCTCTACAGCCATAAC
GGGTTTAACCTATCCTGCATCTTATTTTCCCGCGCACTAATCTTGACAGA
CGATAACATCGTTCTTTCTCAACGAAAGTCGGTAGAGGACGAAAATTCGA
CGAAAATTTGACGTATTTCTGCTCATATCAGCGGTATTACTTAAAGTAAA
GATACGAAACTTGCACGAAAAGTTAGCCTATTATAAGAGTAACAAGCGTC
CCAAGTTTCATTATTCAGCATTGTACTGTTTTTACGGAATAAGGGATTTA
GTAATGACGGTTGACGTCAAAATAATTTCGGAATTTTTgcgttctggtct
gtaaaatagacaCCTACAAGAAAATTTCGGACGGCAAACAAGTAAATTCG
GAAACTTCAGACATAGTGCTACATGATGATATATGTTTGATTGTGCCTCT
ATGACTGTCATAGTTGACCTCCTCCCAGCTCCCGGACTATTCCTTTCTCC
CTATACCTTTCCTCGATTCGGGTTATTTCGTAACGTAGTGTCGTTAGGAC
GGAAGTTATTTACCTTTAACTGCCTGGTTATTTAACTGTCGTTAATGTCC
CTGCGCATACATAGTAAGCCCCTAAATGGGTTCGTTATGGAGGTGATTTA
AATGGATGATGTTCTATTTATATAGATGTtattaatgtttcaaaatttcc
ttcACCACAGTATATAAagattaaattcaaaatattaaagATTACAATCA
CAATTAAAACTAAGAAAGACTTACACAAgtaaatttagattttgaagaaa
tctgttttataaattaaaaacaGTCTCAATATTCCCTGTCTCGTTGACCC
AAGGAGAACAATGAAGGAAAGGGGATAGGGGACACGATGATAATAAATGC
CTAGCTTCTGGTCGGTCGGGACTCCAGATTCTATTAGCGAGTTtgtgtat
gtgtgtttttttcTACGACGGAggcggtaaggttctaatttggctaGATG
CTGACCAGCCGAGGacaacggtaaatcagcactttgaCCATTCTCAATTT
TGCGGTTTAGAACTTCGGGTTATTCCAAACTGTGCAAACGTGCAAATACA
CAAACTCACTATTGTTTGCTGCTCAAAGAATACAGTGAAGATCGGGTGAA
GATCTTTAgttttttagtttattttctagtggggatgaaaatttagTGTG
ATTTTCCTATGAAGGAtaatttttctgctgattttttCGAGACAATAGTT
TTCATAGTAAGAAAATTTAGATATCTTATTAACCTTTTAAGCAGAATTTT
ATGAAATCTTACGAAATATTAATTATGTTAAGTTCATTTTCCTGCCAAAA
CAGAATGGTATCAAAACATGAAACCTATTTAAGAGTTTTCCTAAATTTCT
GATCCTTGATATCCAATACAATGCCAACAATTCAATCGATTTGAAGGATC
ATATTTACGCTTCAAACTTTCAAGTCGTTCAAGATTATCTCCCCAAAACG
CTCTCCTCCAATCAGGTTCCGTTTTGCTACCGTGGTTGTAACAAGACCCT
GAATCGGGCACCGTTTTCCGAATGAACTGTAAAATGCCGTCATCAAAGGT
TTGCATCTCCCAAAGAGCGTCTCTGATGTGAGGACTCACCGATGTTTCAT
ACTTTCCGACTCGGCTTACTTCGCCTCCTGTaataaagagaaaattttga
aatctctgAAATAACTacatactttttttaaaagaattatttCATAATAG
TATGAGACTGAATTTTGGTCCAGACCTTAGAACAAATGTTCCAGCTTCAG
ATATCAGAAATGGCTAAGAACGTTTTGATTTTATGACGCTTTTACGTCAA
TAAATACCAACAAGTAAGCATTTTTAGaacaatttaaagaaaatttgagc
cTGAAAATCCCGAGAAAGATAATGAGAACTGCCGGGTCTCGGCCaaaatt
ccttataaaaaagagcgTGACAGAGGGTAACCACACAGACCTAAGATGAT
CTGTGAATTCTGGATAGTCCATCAAAACAGGCGTATTCAAATTGCGTCAT
AGTATTTTCATTCGTCTAACTAACCTTGAGTTACCCATTATATATTCAGG
TCATTGTATATTATAATTTGGTCTTTGCTCTTGTCACATATAATGAGTTT
TCTGGTTGTTAAAGTTATGTTAATGCTAATTTCAAAGCTCTAAAAATCGA
AGAAATTGTTAACACCTTTAAAGTTTGGAATACACAATTTTTGTTCTTAA
AAGATGCATGGGTAATGGTTATATATGATGTATTATATGGGATATCAGAT
AATTCTAAAACATACCTAAAATGTAACTGAGGACAAGTTTGCCACTCCTG
GcaatatcttttaaaaatttcctaGCTCTCTTCTCGTCATCGACAACCCA
CTTCCTTGATACAAACCAGCTCCCAGAATTCTTTGTCAAAGCTGACACTG
CTGTACTGTCAAATCCCCAAAATCCATCTAATGCTAAGCTGGCTGATGAT
ATTCCATCTAATCCATCTTGAACTTGTATGATGATATTCTGATGATATTT
TGGTTTGATGGAGTTTTTCCATTTTCGtagatcatttaaaaaagttttgt
cgGCATCCTCCATTGAACctaaaatcattcaaaaaatgTCAATAGTTTAT
TATGATAATGACTGGTTTCTCCTTACTTGGCGAGACACTACCTCACAGTT
TTTCTGATCGGGTCGTGAGTTAATCCGGCGTGAACCACCAGGGAAAAAGG
TCTACACACTCTCGCCTTATCCACGATGTATTGTGGAATCGATACCTAGC
ACAGTCACCGACAGGCTTCTCAAGTTTCTGTCTACCCAATTCTCCTCACA
TGGAATGGGTTGGCCCGGGTGAAgatacattcacttgccaagtgaatcac
atCACCGgttgggaatcgaaccctgtcCACCTGGACGGCCGTCAAGATTG
ATAACCACTACAATACTACACCTTATAGTTTATATACACCCCAAACAATA
GGTTATTGATAAGTGTACGACCACAGTCAAACGCAACGCTAAGACTCCTC
TTTAAGGAAGACTGTCACTATTTCTCTCTTAATTACTACTCTTAATTGTT
GAGTAATAAGCAAAAAAGCATCGAGTATCATTTTATACTGAGTGTGAAGT
CATTCGTATGACCCAGCCGGGGATTAAACTCTCAACATTGTGCACCGTAG
CCAAATGTTTCTCGACCTTTACAATTCCTTCCCGAGTATACAAAATAATA
TAAGAGCTAATACCTTCAAAGATGAACGTTCCTAGGGTGGTATTCCAATA
ACCGCCCCATCTTTGATCCAAATGAGGTGATTTCATGACCCACAAGTCAA
TGAAACTGTCTACGACTTCAATCGGTGTTCCTGGCACAATGTTGAATATT
AAAAACACAAAGGGATTTTTCGGTAAAAGCTTGTATTGTGTTGAAACAAC
CACTCCAAAAGTCCCGCCACCTCCGCCTCGGAGCGCCCAGAAAAGGTCAG
TATTTTGACAAGCATCTGCAGTAACGAGACAACCATTTGGTAAAACGACA
TCAAATCTAAGCACATTGTCGATTCCCAAGCCATGGTTTGGACTCATCGG
TGATAGTCCGGCACCCATTAGCCAGCCACCCGAGCTTGAGATCACATTTG
CCAAAGCTCCTAATATATTATAATCAGTACCAGCAAGTCTACCGTAAATC
TCTCTCCATGTTTGACCACCACCCATTTTGATGGAAGCGGGATGTACTTT
TCCACAAGAATCACAAAAATCATTTGAAATTTGTCCgaacttttggaaat
ttctcaTCCAAATTAAAAGAGTGTCTCTTCCAAAACTTGAACCAGAAAAA
GAATGGCCTGTTGTTTTGACAGTAATAGCGATATTGAATTTGTTTGCAAA
CTGAATAGCATGGATCACATCCTGTGTAGTCTTTGCTTCTACGCTATACG
AAGGCAAATTTGACGTTTCGTTAGCCAAACAAAACCTTTTTGAACAATCT
GGAATCTGCATACAAGCTCCATCTGCAGCTTTGCTCAGACTATCTGAGCT
ACTAATATCGGAACACTTTTCAAGAATAGAAGGTGTAAATTTGTGAAGTT
TTCCATCCAAGCGATCACTGAGGAGCCTCTGCCAAGTCTCAGAAATCGGC
CAACAATTATGGTTCTTAGGTGTACAGTAAAAACAATGAGTTTTCTCAAT
ATAAATATTGAACACAGAAATTATTAGTAAAATATAACGCAAAATCTCCA
TAGTTGTTCACTATCCAGCAGCTAGGTTAAGATAAGACATATCATTTATT
CAAAGTCAGTCAAGATTTATAGCTTTTCTTTGGCATTATAATGAAGCTCC
GGAAACTAGTACACTTAACACTTAACAATAGAATTACATTAACTACTTAA
AGAATTACATTTTATGTCTAAATGTATAATTGGAAATTCTTTCCGGATTT
TCATTACAAACAATTAAAGAGAATATAGATAATTTCAAATCTTTAGCACT
CTAAATTACTTAGCACATCGTACCTTTTGCTTTTGCCggtttatttatca
aaaatcaatctATTCAAGAAAAATAATTCCGAGATTATTTCGACATTAGC
TTATCCACTGAGGAACGAAAGGAGTTTGGCTATTGCTTGCTAACCCAGAC
ACCACTATCTCAGTgctccggtggaactttttcccacctTTGGGAAGCAA
ATTCCTATCGAAATCCTAATGGTGATAGTAATTATCCCAGGCTCTAAAGA
TTCAGGGGCTTTGGAGAGTACTTTCGTCTATTCAGTTTGAAACAAGTTGA
AATCAAAGCCAATTTCTTAGTGTGGTAGATATTCGGATATTGtaggccaa
attttccagtggataGGGTCCCCCAAGGTCTGTGACACGGTGTGAAAGAT
TTTGTCTGGGGCAGAGAATTACAAACAATCTTTTTtctacaaaattaaaa
ttttgtatcTTTCTTTAAAACCTTATTCTGGCTGCCTTTGTAATTCCGCT
CACCATCAtgattttacatgtttaaatcAACTTCGCTATTCGGGAAATTC
TCTCATATTTTTACACTTTAATGCGTAAAGCTCGAATTAGAGGGATAATC
AACTCAATGGCATTTCTAATATATGACAAAATAGTTTATCAGATCTACTC
TTCCACACAGGATGTGATAAAGTGGGACAATCCGGAAACTAGTGCACTTA
ACTATGAAATTAAAGAATTACATTCTATGTCTAATATTATTGGAAAGTCT
TTCCGGATTTTTATTACAAACAATCAAAGGGAATAATTGGATAATTTCAA
ATCTTTAGCCTGGAAAAGCACTTTAAATTACTTAGCACGTCGTACGTTTT
GCTTTTGCCggtttatttatcaaaaatcaatctattcaataaaaataatt
tccgAGATTGTTTTGACATTAAAGCTTATCCTCTGAGGAACTGAGGAGTT
TATCCACCGGTGGAACTTTCTCACTTTTGCTTTTGGGAAGCAAATTCCTA
TCAAAATCCaaatgggaatagaaattatattgtttccAGCTCTAAAGATT
CAGTGGGTTTGATTGCACCTTTGTCTGTTTGAAACAAGtcgaaatcaaag
tcaaattcTTAGTATGATAGATATTGTAGGCCATTTTTTATCGGCGACAA
AGTTTTGGCCAAATCTTCCAGTNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNCTTAACTATGAAATTAAAGAATTACATTCTATGTCTAATATT
ATTGGAAAGTCTTTCCGGATTTTTATTACAAACAATCAAAGGGAATAATT
GGATAATTTCAAATCTTTAGCCTGGAAAAGCACTTTAAATTACTTAGCAC
GTCGTACGTTTTGCTTTTGCCGGTTTATTTATCAAAAGTCAatctattca
ataaaaataatttccgAGATTGTTTTGACATTAAAGCTTATCCTCTGAGG
AACTGAGGAGTTTATCCACCGGTGGAACTTTCTCACTTTTGGGAAGCCAA
TTCCTATCGAAATCCaaatgggaatagaaattttattgtttccaGCTCTA
AAGATTCAGTGGGTTTGATTGCACCTTTGTCAGTTTGAAACAAGTTGAAA
TCAAAGCCAATTTCTTAGTGTGGTAGATGTTGTAGGCCATTTTTTTTcta
ccggggacaaaattttggccaaatcttCCAGTAGATAGGGTCCCCCAAGG
TCTGTGACACGTTGTGAAAGATTTTGTCTGGGGCAGAGAATTACAAACAA
TCTTTTTTCtacaaaattaatattttgtaTCTTTCTTTAAGACCTTATTC
TGGCTGCCTTTGTTATTTCCGCTCACCATCATGATTTAATATGTTTAAAT
TAACTTCGCTATTAACTTTGGGAAATTCTCTCAAATTCTTACAGCTCGAA
TAAGAGGGATAATCGACACAATGACATTTCTAATAATATTAGATCGCTCG
AGAATAAATTAGGTGGACAAAAATATACGTTTGTCACTATATCTGATGAA
ATCAGACCAATCTGGTGCCCGAGGCTTTCGCACgacttttaaaaataatc
tcAGTATTGGTCAGCTAATATGAGtgtaattttttccaagggagaAAGTT
TCCTCATTTTCCGGGCGCAATTTCAAAGGCAAACTTCCAGGGAACCATGT
GGTTATCGTAAGTTCTATCATTAAACAAAAGCCAGCTAAAGTGGACATAC
AAGTTTCGAAATGATCGTAAAGTTCGATTATtgattttaaggaaatatta
TGTTTTACTCAATTTCAGCGGAGGCAGCTGGTCTACTGAAGGTTGTGAAG
TTATCACCAGCAACAGAACGGTCACTGTTTGTCAATGCCATCATCTCACA
CATTTTGCCATCCTAAGCAGTACTAAAGAGGAGAAGGTAGGTTGCTCAGA
TTAATTCTTGTTAAAATTATATTCTTTAGAATGTACTTCCTAGCTACCTT
ATTatacgaatattactaggcaagtatttaagggctctgaccatagtcca
aaaattgattttggtatttgaacataaaagttatatttcaggttccttaa
cacttttaacaaagaattgcctNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNtttcaaaatgttttttcttcgccgaaactaagctcttcaaagttgaa
atactcttcctcgcaaaagtcttcattttcttctttatcaaatcttttca
atgcaatttttaaattttcggattcaggaatagtttgtctaacagaaaat
gtataacatgccatagttttgttggttacatcagtcagaaaaaacatttt
aaacacggcaattatgagaaattcactatggtcagagcccttaaattgaa
atttgcacgatctgaaataaacacgtttttttctgctttttcaaggaaac
agcggctgtttccttgaaaaaagCAGAGAGCGGCTAGTTTtgattaaggg
ggtttttattaacacaaaatttttcaattcgtaaTATtcgactagtaata
ttcgtgtaataaggtataccAATTCTATTTTCTGATCATACAGCGGAATA
TTCTTTCGACGTACAAGGATCCGCAAACAGAAAcgatttttgcgattttt
ggcCTCTTTTGAAAGACCTGACAGATCTCTCCGAACTAAATAAATTGGCC
TAAATAGTATCCCAAGTGAGAAAATTGAGCTGAATTTTTGTCTCCATTGA
AAGCCTCATTAACGCTTATTCCAGTCAGTCTTCTTTGAAGAATACCGCCG
AGACTTTTAGTAAAATTTCATTTACTTGAAGTTGACTAACTTATATAAGA
catattttcttttcagatttcAGCCAAGGAAGAGATCAAAGAGCACACAA
TGGCAATAATGTGGCTTGGTATACCATTGATGATTGTGCTCACATTGGGT
GTTCTTTACACTTGCTTTTCATGGTAAGTTGGTGTAAGTTGAATGTGTCG
GCGAAgcaattttaaaacttaaattttCGAATTACATTGACTATTATAAG
GAATTTAtcgaataaatatttcaattttcagagGGATCGATGGTGTGGTG
GGaaagattttcagggtggacaagcaaaaattttcgcccccTCTAACGCG
ATTATTGAATTGTGAGCGAAGCGagcagaaaaaaactttttacccATTAC
AATTCAAGATACTTGTGAAATGACGCGATTTTCGTAGTAAATGAGCGCCT
TTTCACGTTTGCTGCCTCTTGCTACCACGTGActgagaccatgttcagac
gttaagATTTTGTATCGCTCCGGTATAATATTTGTTACGGATAGGAAGTG
TTCATATTAATTTTGGAACGTGTCGAAGCACGGGAACGGAGCAGTTTCGT
TCCGACaaaaatagtggagcgaaactgtttcgatctgttttgcttggTAA
CGTCTttatttttgacgtttcgaattttgacgttcacacagtgtttcgga
accgtttcatTTCGGAGTGAAACGATACCGTAACGTTTgaacatagtata
agaaagccgcggctggaatatgtactgcattgtcttttcagttaagtttg
ttctatctctgtctccgagctttataagaacatcaagattgtcagtttat
tattggtagatagtttttgaaatgtttctcttattttccttcacaaattt
ttttattgatagatatctttgaatctgtacccaatagaacaattgaactg
attttggacaaattttaggggtattttgtggaaacgatagtttttcgcca
aaattagaattataagaactatattcaagatgacaactttcctgttagtt
tgctggcttgaaattttcaaacaattatcttgatgtaccatttcattgat
ttctaaaaagatttcactgaaatattgtgaaggcatttcgaggcacttta
ttaatttttgagttctttcaacccagccattttgtgcttgtttaaatttc
ttattgttaaactttcctgcacaatgattttataatgcaagtgtattatc
aagggcatatcattaatgtctaaaacgcacagagggaagtaagtattaac
gacaaaccaataaaatttaccattaaagatgctacattacttatttcttg
atcaacaaatagtcatcaaatacgacagagatagaacaacagacattcag
atgttatcattccagccgcggctttcttatactatggtttgaACATGGTC
TGAAAGGGTTCAAGTAGAATTTCACAAATAATTTCTAAATACGTTTTATT
TCAGGTCGAAATCACCAAAGAAAAGTCAAGTAGGTTAGCTGGGTATccta
ttttgtttaaaattttctaaactttAATTTACCAAATTAATTATGCTtct
ataaaaattatttttgaactgGTACCTTTTTTTACAGTCATCTTAGATAA
GAAACCAGTCTTACCTAAAGACAATGTATTCACAACACAAGAAATTAATC
AACGATATCGCGGCTCACCTAAAAAGAATCTGTACGCAGCCAATCCTCAA
AGACGACAACGACAGAGCCGTTCATCAGAAAATCTATATgaaaatcgaac
aaaaaaatcacctccTATAACTAAACCAAGTGAATGCATAccgaagcaaa
attttttcgGAGGTAGCAACCAAGCTAGCCATAATACTCCAAGCCCCTCA
GATTTAGAATGGGAGCACGCTTGGGATTGTTTGACCAACTCAGAGTTTGA
TACTAGAAACACTAAAAGACTTCACGAAGAATTTAAAAGACAattgctga
aaaataaaatgattcgTCAGCAACGTTGCCTGCGTCGAAAGAACTCATCA
GAAAGTTCGTCCTCTTCTACGGATGCGATAAGTGAGATCTGTTCGCATGA
GCGCAAACGTCGTGGTGTATTCGAGAGATATTTTCGATGGAGAGCAGACG
AGAAAATGGAATGGTCGAAAGAAAAGATCAATTATAAAGTgatcaaagaa
gaaaaacaaaacttgGTAAGTATATACTATATTCATGTGATTCTTTAAAG
TCGTTGTAATTTACCAGTCGacaaaaatcttgagaaaattatCTCTAACG
GTCCAAAAAATGCCAATTTTTCCTCTCTCTAGCTAAGGGtcaattttcga
attttggccCGGAGACATTCACcccgcaaacctagtacccctgGGCATTC
AACCAAGTATTAACTCAATATGCTGAAAATTGCACAGTTCCTTTGAATAA
TGAAATAGATAGGATGTCTTCTTTCTCGGTGAACTTTTTTGATAACTCTT
AGATCTGCAACTAATTCTTTCCCGTATAGGTTTCACCAAATCAGGATCAA
ATGGAAAGCACGCAAGACCAAAAGCCTATCGGGCGCCATTTAAAGCCACC
CTTGTCTTGCCACTCACCAAACAATACCATAAATGAAAGTGACCACCGAC
CTCTGTTCTCACCAGACGCTATAAGTTCTCCTCACTCAATGAATGAATTC
CCAGTTAGCAAAAACGTTGAAACTCCTTACATGGGTCAAACTCTCACAAA
CTCGAACCGCTATTTGCGAATTTCCTTTGACGCTTTAGACGCGTGTACAG
ACTCTACTCTGGACTCGATTAATCAAATTGTATCAGACATCGAGACAAAT
TATGACGACTTATTGTTGGATTCCCAGCAGAGATTACGTCTTCAACCTAT
ACATCATCAAAAAATggctgacatcagcattttTATTGAAAGTGATGATC
CTACTACTCCGAATACACAACTGCGGGTCAATGCAGGATCTTCAGAAGAC
ACAGGTTATCAAACCTCACAAGCCAGCTATTGCGGTAGTAATTCTGAGGT
CGATGTATCGTATGATCAAATCAAACTGAAAAACACTGGCAAATATTTTA
GAGACCATATCTTTACCCGGGAAGGTTTCCAAGGCTTTCAATGCAACGAG
TTTTGTTGTATAACATATATAGAACTTTTATTTGTTTCCTTCgagacaaa
agaaaaaggttacCAGTATGGGCGGAGGTTGGATCTTGGGGGCGTATCTA
CAACTGACGTCTCTACAGATGAAGAGAGTGACCACAAAAAGAGAATTTAC
AACTACAAACAGAGTAAAAATAAGAGAAACAGGTTCTCCAGTACCCAACC
TTCTAGTGCAATGAAACCCTTAAGAAAACTTATGTTAGAGAACACAACAG
TTACAGCTTCAGGTTGCCGTGTAAAACGCTACAGCGCAAGAGAGTGCAAA
GTCTCTCCAACACAGAGCGGAAATCGCAACCAAACACGACACATGAAGAG
CTATATAGCTTTACGTCAACAATGTCGATTAAATGATGATTTGTCTCCAT
TATCCAAACACAAAGGACTTATACCGAACTTAAAATCACCTCTCGAAACG
GCAGGCGCTATACGAAAATCCAAACTGAAACGAAAGAAAGCCTNACCTCT
CGAAACGGCAGGTGCTATACGAAAATCTAAACTGAAACGAAAGAAAGCCT
TCAAAGTGTCAAGTGAGACGGATAATATCGGGAAAGCGAGACAACGTATA
ATGAGACGGGAAAATCGAGGCAAACGAACATTGAGCAGAGTTGATACTTC
ATCTGACTCATCGAGTTTGTCATCAGCAAACACGTCATGGGACTCACTTG
TTCAGGTATGTTGAACTCTGCTGATAGTTTTGGGTTGACCATGGCACCTT
ATACATAATGATTACGGGTGGGGGTCAACAAAAGGGATTTGAATAGCGCG
CTCGTTTTTTTCAGTTAAATCAAAAAAGTTGCAGTTACTCAAGGTATGAG
ATTACTCAAAAAGCACGCAATGTTGTTTCAACATCCAACCTACTGTGTTT
AACCTCAATACAACGCTTAGATATAAGTTGGAACCACGTCTTGTGCTTGG
TGGGAGTACTGGAAACGTTAGCAACTTCCTTCAAAATGATAGCAATctta
tcaatattttaaactAACACCatgattttttaagattttagttTGGATAA
ACACTTAGGCCTTTTTTGTCTTCTTAGTGCTAGTTCGAGTAGCCACTCCG
CTATTAAAGAATTcccaatcaaatttttatttttcagacttaTCAATTAA
GCGAAGGATCTTCTCTTGAAAGCCATGAAATCGAAATGGAATGCAACAAC
AAGTTTGGAGATTGGTGATCTGCAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034625XLOC_034625Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054939-exon-scaffold_247-1491911889:54196..54374TCONS_00054939-exon-scaffold_247-1491911889:54196..54374Clytia hemisphaericaexon
TCONS_00054939-exon-scaffold_247-1510915933:54196..54374TCONS_00054939-exon-scaffold_247-1510915933:54196..54374Clytia hemisphaericaexon
TCONS_00054939-exon-scaffold_247-1575043694:54196..54374TCONS_00054939-exon-scaffold_247-1575043694:54196..54374Clytia hemisphaericaexon
TCONS_00054939-exon-scaffold_247-1491911889:55587..55662TCONS_00054939-exon-scaffold_247-1491911889:55587..55662Clytia hemisphaericaexon
TCONS_00054939-exon-scaffold_247-1510915933:55587..55662TCONS_00054939-exon-scaffold_247-1510915933:55587..55662Clytia hemisphaericaexon
TCONS_00054939-exon-scaffold_247-1575043694:55587..55662TCONS_00054939-exon-scaffold_247-1575043694:55587..55662Clytia hemisphaericaexon
TCONS_00054939-exon-scaffold_247-1491911889:56164..56281TCONS_00054939-exon-scaffold_247-1491911889:56164..56281Clytia hemisphaericaexon
TCONS_00054939-exon-scaffold_247-1510915933:56164..56281TCONS_00054939-exon-scaffold_247-1510915933:56164..56281Clytia hemisphaericaexon
TCONS_00054939-exon-scaffold_247-1575043694:56164..56281TCONS_00054939-exon-scaffold_247-1575043694:56164..56281Clytia hemisphaericaexon
TCONS_00054939-exon-scaffold_247-1491911889:56766..56815TCONS_00054939-exon-scaffold_247-1491911889:56766..56815Clytia hemisphaericaexon
TCONS_00054939-exon-scaffold_247-1510915933:56766..56815TCONS_00054939-exon-scaffold_247-1510915933:56766..56815Clytia hemisphaericaexon
TCONS_00054939-exon-scaffold_247-1575043694:56766..56815TCONS_00054939-exon-scaffold_247-1575043694:56766..56815Clytia hemisphaericaexon
TCONS_00054939-exon-scaffold_247-1491911889:65764..65881TCONS_00054939-exon-scaffold_247-1491911889:65764..65881Clytia hemisphaericaexon
TCONS_00054939-exon-scaffold_247-1510915933:65764..65881TCONS_00054939-exon-scaffold_247-1510915933:65764..65881Clytia hemisphaericaexon
TCONS_00054939-exon-scaffold_247-1575043694:65764..65881TCONS_00054939-exon-scaffold_247-1575043694:65764..65881Clytia hemisphaericaexon
TCONS_00054939-exon-scaffold_247-1491911889:67262..67368TCONS_00054939-exon-scaffold_247-1491911889:67262..67368Clytia hemisphaericaexon
TCONS_00054939-exon-scaffold_247-1510915933:67262..67368TCONS_00054939-exon-scaffold_247-1510915933:67262..67368Clytia hemisphaericaexon
TCONS_00054939-exon-scaffold_247-1575043694:67262..67368TCONS_00054939-exon-scaffold_247-1575043694:67262..67368Clytia hemisphaericaexon
TCONS_00054939-exon-scaffold_247-1491911889:68700..68724TCONS_00054939-exon-scaffold_247-1491911889:68700..68724Clytia hemisphaericaexon
TCONS_00054939-exon-scaffold_247-1510915933:68700..68724TCONS_00054939-exon-scaffold_247-1510915933:68700..68724Clytia hemisphaericaexon
TCONS_00054939-exon-scaffold_247-1575043694:68700..68724TCONS_00054939-exon-scaffold_247-1575043694:68700..68724Clytia hemisphaericaexon
TCONS_00054939-exon-scaffold_247-1491911889:68833..69410TCONS_00054939-exon-scaffold_247-1491911889:68833..69410Clytia hemisphaericaexon
TCONS_00054939-exon-scaffold_247-1510915933:68833..69410TCONS_00054939-exon-scaffold_247-1510915933:68833..69410Clytia hemisphaericaexon
TCONS_00054939-exon-scaffold_247-1575043694:68833..69410TCONS_00054939-exon-scaffold_247-1575043694:68833..69410Clytia hemisphaericaexon
TCONS_00054939-exon-scaffold_247-1491911889:69725..70799TCONS_00054939-exon-scaffold_247-1491911889:69725..70799Clytia hemisphaericaexon
TCONS_00054939-exon-scaffold_247-1510915933:69725..70799TCONS_00054939-exon-scaffold_247-1510915933:69725..70799Clytia hemisphaericaexon
TCONS_00054939-exon-scaffold_247-1575043694:69725..70799TCONS_00054939-exon-scaffold_247-1575043694:69725..70799Clytia hemisphaericaexon
TCONS_00054939-exon-scaffold_247-1491911889:70857..71050TCONS_00054939-exon-scaffold_247-1491911889:70857..71050Clytia hemisphaericaexon
TCONS_00054939-exon-scaffold_247-1510915933:70857..71050TCONS_00054939-exon-scaffold_247-1510915933:70857..71050Clytia hemisphaericaexon
TCONS_00054939-exon-scaffold_247-1575043694:70857..71050TCONS_00054939-exon-scaffold_247-1575043694:70857..71050Clytia hemisphaericaexon
TCONS_00054939-exon-scaffold_247-1491911889:71483..71571TCONS_00054939-exon-scaffold_247-1491911889:71483..71571Clytia hemisphaericaexon
TCONS_00054939-exon-scaffold_247-1510915933:71483..71571TCONS_00054939-exon-scaffold_247-1510915933:71483..71571Clytia hemisphaericaexon
TCONS_00054939-exon-scaffold_247-1575043694:71483..71571TCONS_00054939-exon-scaffold_247-1575043694:71483..71571Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_247supercontigscaffold_247:54196..71571 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.251245	9.47174e-07	0.0425947	0.000183235	0.740806	0.985753	1.72658	2.26518	0.604824	0.958583	3.42505	1.15513	3.90642	3.04382	2.81283	4.72533	1.77928	3.311	1.04046	0.530537	2.25964	2.03398	2.57037	1.70388	1.53047	1.92067	0.127	1.12949	0.98653	0.95722
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00054939 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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