TCONS_00054944 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054944
Unique NameTCONS_00054944
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1179

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054944 ID=TCONS_00054944|Name=TCONS_00054944|organism=Clytia hemisphaerica|type=transcript|length=1179bp
AACAACTCCCCGATTTCatgaatgacgtaatctttcaatttaaaaacaaa
cgcTTCCCCTTCAttcagaaaatttaattttttgaggTGAATCTCAACTG
AAACTTCCAGCTGCAACTTTCACTTTTTACACAACCATGGATGCCTTTTT
TGGTGAAAGATCTATTTCCTTATCTGCTTTGACTGATTTTTCAAAGTTgg
ATGTATCTACaaagaaacatttgaaaaatgtatATGGTGCCTTATCATTA
TCCATGCTGTCAGCCAGTGTTGGTGCTGGTCTTCACTTGTATAGTGGATT
GAACTTGgGAATACTTGCTCTCCTTGGTGGTATTGGATTCATGCTTGGGC
TAGCATTCACACCAAATGAATCAAAGAACCAAATGACCCGTTTAGGATGT
TTGTTAGGTTTTGCAGGCTGCACAGGTTTGTCAATGGGACCATTATTGGA
TGCTGTAATCAGTATTAACCCCAGCATCGTAACTACAGCATTCTTTGCCA
CCTGTGTCATCTTCATTTGTTTCACCTTGAGTGCATTATGGGCTGAGGAA
AGAACATATTTGTATCTTGGTGGCACCCTCCTTTCTGGAATGTCCACATT
GTTCTTTCTTGGTTTGATCAACATCTTTTTCGGTTTCCAACTCCTTTATC
AGGTTCATTTGTACGGTGGCTTGTTATTATTCTGTGGCTTTATCTTGTAC
GATACACAACTCATCATCGCCAAACACAAAAATGGAGACAATGATTTCTT
ATGgCATTCAGTCGATTTGTTTTTGGATTTCATCAATATCTTCCGAAGAA
TTATGATCATTCTTGCAAACAAAgaaaacaAGAAGAGTAAGAAGAAGAAC
TGAATTCAATAAGAGATACTTGATGCAATGTTATCGCAAATTTATTCCTC
AATTCTTGGGTTTTAATATGGAAATCAGACTGTACTTTCTTTTTTTGTAG
CATCAAAAGTTTATACTTTGAAGTAATGCAAGNAATGTTATCGCAAATTT
ATTCCTCAATTTTAATATGGAAATCAGACTGTACTTTCTTTTTTTGTAGC
ATCAAAAGTTTATACTTGGAAGTAATGCAAGCATAATGTACTGTAAAATA
AATCATCGTGATCTTTATTCGAGTAAATAAATATACCATTCTGTTGAAAT
TCTATTCtttgcattttgttttgaaattt
Run BLAST on NCBI

protein sequence of TCONS_00054944-protein

>TCONS_00054944-protein ID=TCONS_00054944-protein|Name=TCONS_00054944-protein|organism=Clytia hemisphaerica|type=polypeptide|length=238bp
MDAFFGERSISLSALTDFSKLDVSTKKHLKNVYGALSLSMLSASVGAGLH
LYSGLNLGILALLGGIGFMLGLAFTPNESKNQMTRLGCLLGFAGCTGLSM
GPLLDAVISINPSIVTTAFFATCVIFICFTLSALWAEERTYLYLGGTLLS
GMSTLFFLGLINIFFGFQLLYQVHLYGGLLLFCGFILYDTQLIIAKHKNG
DNDFLWHSVDLFLDFINIFRRIMIILANKENKKSKKKN
Run BLAST on NCBI

transcript from alignment at scaffold_247:82006..92940+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054944 ID=TCONS_00054944|Name=TCONS_00054944|organism=Clytia hemisphaerica|type=transcript|length=10935bp|location=Sequence derived from alignment at scaffold_247:82006..92940+ (Clytia hemisphaerica)
AACAACTCCCCGATTTCatgaatgacgtaatctttcaatttaaaaacaaa
cgcTTCCCCTTCAttcagaaaatttaattttttgaggTGAATCTCAACTG
AAACTTCCAGCTGCAACTTTCACTTTTTACACAACCATGGATGCCTTTTT
TGGTGAAAGATCTATTTCCTTATCTGCTTTGACTGATTTTTCAAAGTTGT
AAGTATATttataaagtttattttttgtatTCTGTACATAACGTCATGTT
CCATCGgcatcataaaaatcattttgattgacagagttgaaattttcaaa
aattgtgtttATTATACCAGTATGGCATGATACCCTATGTTCAAGGACCT
CCTTAATATGAAGGGTTCATCCTTCTGAGTTGCAGTTTAGTCAGCCAATT
TTTTGCCCTGGTTATTCTAAatcaatgggccattccagaatttgtctgta
accatggaggtataaagaaacaggagaagtatgctattgtaaccatgctc
gccctacgattagaaaaattacgaggtatgcatgNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
Nataactttttattttctggctggagaaaatatcttttcaaaacaaaatt
taatggatgacaaaattgaacgcaaacttatttcgtggagctaaatttta
ttctattctcgtatattagacggctagaaatcttcgatgctgatagtaag
aatgttcagagcaaacttgagttctactaaaaagtcgtatttcttcgggc
gagcctagaatttcttttgatttattacataaaagaaatcaaaagacttt
aacgaccaattaccgacaaattcatctcctgtctttctttatacctctat
gctgTAACACTGTTACTAACAGGGGGGcagacgacacaggatttccgagg
gcaaaagttttcaccaaaattcgaaatttccaaggcgagagaagaaaatg
tatgaatttccagggcaattgaatttaaaaacagtgtagctggaacctca
atattccaggattagaaaaagctaNaacagttatttggggggtcggattt
aggcagggttgtcggatttaggaccactcacggtacctgtttatcttttt
tctttaaagaatcaacaagccatcaacatcgataaattacacacatttcc
tcagaaactttgaaaattatctgccattatgactttcttgaagccattct
gaaattaaccaatcaccaatcgggttatgtatcaGAACTCCTATGGGaat
tcttttccgagatttgtaaaatagctaagtcggcgaAAAAACTTTTCCCA
GGGGTTTAAGGAAAAAAtagaactgctatcatttgttttttatttaacca
tatatttaaatttacgCTCAAAAacacttaaataaataagttaacaatat
tcaatatactatttgtatctctcagaaaataaacacttacagaacgacat
caTTTGGAacacccccgtatttggaccattctattgtgggcgcaaaatag
ggaggaaactaagtagcaccctcagtgcaagattactgcctcatctttat
tcgcccgtgTGAGAATgcaagctaatcatttttttctcaagcGCTCTTAA
GGGGAAAAGTaaagtgatcaatattctttgtaggaaaaacgtcagaaaca
aacccaaagatcaaaagatgtattttgttgttgacaatctatcctgtgaa
gatgaaaaaatttctgctacaTTTCTGtaatgcgtttttttcggaacgct
aattcttgatctttcctttaaggtaaagaggttgcgagatttgggttagc
gaggcaaaaattgctaaaaagctggtaaaatcgtattgctcaaaaatcaa
agttccagcctcactgaaaaaggcaaaaaagagtggaattacCGATGCAT
TTTggaaaagtacatggatttttattggaatttccgaccaccactggaaa
agaaaaagtatttccgaggctagaaaaaaattaaaaatgcactTCATccg
acggggggtaacaaaaattttctggaattgCCCAATGTAAAAgcattttt
atttgcaaaatcTGAACCTTACACATTGCAAGTTCACAAATATGGCTAGA
TATTGCTGCAACTGAGTTCATAACAAATTAACTTCCACTGTTAGAAGTCA
TAATTTTCCGTTGTCAAAGCAGAATTATGAATCTCAAAAGAACTCTTTTA
GCATTTTGATTAATAGCCTTGATAtccagacaaacaaacaaaataaaata
aaatagcaaaagaacaaaggaattacggGGGAATTATAACCATAGCCACC
ATTTTGCAGCAATGAAGAATCGTGATtttacggaaatgggaatcctcata
ttgaataaagcatcttctgaaaaatttcattcttttaccataaatgcgaa
aatgaaaaacgaagaagcttTTGTTTTCTGATCATCTTTTTAATCTacca
tgaagtgttataaaattctttATAGAAAGACACATTCTCCTACGGTGAGG
CTTCGAAAAAATGACGTAGAAAAATGCTGTTATATAAAGAGAATGTCATT
TTATCTTAACAATTTCGTAAACTACGTCACAACCATGGAGTGcttacttt
tagttttatgacttgttctcactcgtttggtttctggtaataaaaagaaa
gttgttattgtgaactttgaacatgcttaaaatcgaggtactttcactaa
ctgcctttatgaatgtggctgatgtttggatgtagtttaaagtagttttg
aaaggcttttgattttgtaaaagaggttttatggtaagtaattatgtgtg
tctgcctgggtttccaaagttttgagattctgtcaacaagggtttactCA
GAGGCTGTGTCATTCAAAATGTATATACCAGACTTTTTTAGCTGCATCAG
ACAaagttttagaaactttgtattttgaggtaagagtttttttttctgaa
attttgagtctggatacccaggctcaTTGATTGAGTATCTTTGACAATGG
AGAGATATATAATATAAAGGAGAGATTCATCCACTTAACCCTTGGACAAA
CGCATGAATGatgaataaaaatttaaattttagcaTGCATAAGTTCTTAG
NATAACAAATTAACTTCCACTGTTAGAAGTCATAATTTTCCGTTGTCAAA
GCAGAATTATGAATCTCAAAAGAACTCttttagcattttgattgaTAGCC
TTGATAcccagacaaacaaacaaaataaaataaaatagcaaaagaacaaa
ggaattacggGGGAATTATAACCATAGCCACCATTTTGCAGCAATGAAGA
ATCGTGATtttacggaaatgggaatcctcatattgaataaagcatcttct
gaaaaatttcattcttttaccataaatgcgaaaatgaaaaacgaagaagc
ttTTGTTTTCTGATCATCTTTTTAATCTaccatgaagtgttataaaattc
tttATAGAAAGACACATTCTCCTACGGTGAGGCTTCGAAAAAATGACGTA
GAAAAATGCTGTTATATAAAGAGAATGTCATTTTATCTTAACAATTTCGT
AAACTACGTCACAACCATGGAGTGcttacttttagttttatgacttgttc
tcactcgtttggtttctggtaataaaaagaaagttgttattgtgaacttt
gaacatgcttaaaatcgaggtactttcactaactgcctttatgaatgtgg
ctgatgtttggatgtagtttaaagtagttttgaaaggcttttgattttgt
aaaagaggttttatggtaagtaattatgtgtgtctgcctgggtttccaaa
gttttgagattctgtcaacaagggtttactCAGAGGCTGTGTCATTCAAA
ATGTATATACCAGACTTTTTTAGCTGCATCAGACAaagttttagaaactt
tgtattttgaggtaagagtttttttttctgaaattttgagtctggatacc
caggctcaTTGATTGAGTATCTTTGACAATGGAGAGATATATAATATAAA
GGAGAGATTCATCCACTTAACCCTTGGACAAATCTCGTTGTAAAGGTTTA
TCttacagaaaaatattcattttcctaaaatacttatttttagatttttc
cttTTGCCTTAGCAACGaagatatttgaatttttcgcGCATGAATGatga
ataaaaatttaaattttagcaTGCATAAGTTCTTATGCATTTCTAAAGTA
TGTtgaatctttgattttttcagggATGTATCTACaaagaaacatttgaa
aaatgtatATGGTGCCTTATCATTATCCATGCTGTCAGCCAGTGTTGGTG
CTGGTCTTCACTTGTATAGTGGATTGAACTTGGTGAGTTGAATGATTGTC
AATCTACCATATACaatgtgtcccaaaaaaagcacagttttatataaagt
aaaatcctcattaTCTAGACTAGGCTTAAAATTTTCTGTTTAAGCAATAC
GATATTGGattcccaagatgattgaatagggTTTTAGATATTGAAACGTG
AAgataagtcataaaatttggcataaattatgaggattttcctttatata
aaaatgtgtTAGTTTTTTCCGGAAATGATGTACATGATAATATGCTGAGT
CtgaatttcaattaaaaaacattGTTCGTTAGCTAAACCATTCACAAAAT
ATACATACAGGCCAATCAATTTATGCAATTGAGTAATCAGTAATAATTAT
TATAATGATACATTATTAttgatttcaaagattttatttagattttgatt
aatttctAGGATCAGATATAATATAGAGCTgagccaaaaatatttttaaa
atttttctaggGAATACTTGCTCTCCTTGGTGGTATTGGATTCATGCTTG
GGCTAGCATTCACACCAAATGAATCAAAGAACCAAATGACCCGTTTAGGT
ATCTATGATTATTTGAAACTCAAATCTTTTTAGATGCATGATTCATTTTC
CACTCAAAATATTTCAGCTAATACAGATCATTTTATGGAatttcacgttt
ttttaaaCGCTTCTGCTCAACTTTTTCTGTTAATCTAAGAAACTAATAAA
GAATAATTTAtaagttcatttttcaaatgtaaaaaagaaatttaccaAAG
GAATAGGAGAGATTAGTTTAGCTGATCTCCATATAGAGTAAAAATTGGTT
GAAGAATGGCCATTCTCACTATCAATATGTAAAGTTTGATATTCTTGCTC
TAATGAAAATTTCCTCGTCAAGTTTAACGAATATATCGTCAATTTCAAAC
TGCCCCAAACTGGTTAAAAACTAAGGTCATGCAACGTATTGAAAGTAGAA
GAAATGcagtataacttttttttttcattacagGATGTTTGTTAGGTTTT
GCAGGCTGCACAGGTTAGTGGTGTCTTTACTTCATTGAAATTTCACGGTT
AGGTCAATATTAGATATTATCAAATGACTTCTCAGGAATGTTgtgaattt
tgtgattttttgatctcacgaaagtttctgctcgtgaaAACTAACATGTC
TAAAGTATTTCTTGTATGATTTTCCACTTGAAGATTCCCCTTAAAATTGT
CTTCAATCTTTGCTTGTTAGGTTTGTCAATGGGACCATTATTGGATGCTG
TAATCAGTATTAACCCCAGGTATGACATAATTCTATAATATTATcattat
tttacatttttaaaaatactttaaacTATAACGATCGCTTTTCCAACCAA
ATAGTGGATGTCCGGTGTCagataagaataattttttacAACCAGACAAC
CCCAACACCGGACTCATGGAAGTCCGAAGTCCGATGTGTTCGGTGCACAT
TAATTTTTTCCGACGCATGTCCGGTGCCTAGAGCTCTTGACATTTAACAC
CGGAATTACCACGTTCGGTGTAGCGGAAGGATACTTTTTGACATCGGACT
GTACGGTGTGCCGGTAGGGTCGTCAAATACACGATCATTTTTTTCTAACA
ATACTAACTTtttcactatatatatatatttaaatATCTACAAAGTGTTT
TACAGTGTACCAGAGCGTACTTATGTTTTTTTCTCGTCTTTTTCTACAAA
GCATCGTAACTACAGCATTCTTTGCCACCTGTGTCATCTTCATTTGTTTC
ACCTTGAGTGCATTATGGGCTGAGGAAAGAACATATTTGTATCTTGGTGG
TAAGCTTTTAATTATTGCAATCATTTGTTTACTTCCGGGTACCTAATAGC
GGAGggcccccgctaattaatttttcgaacattttccacccaggacagaA
TTGCACTCCGAGaccatcctcactggattttttaacctggAAACAATAAA
GTTACTATCCCCTTGGAAGAACTTCCACCGAGGCTGTTAGCcaggggtgt
tttaaagtcTCTTTGAGATACAGGATAAAAACGATCAACGCGCATGTTAC
TTGGACTTAAATTTATAAAATCATCGTTTTGATGAATAATTATCTTTTAG
GCACCCTCCTTTCTGGAATGTCCACATTGTTCTTTCTTGGTTTGATCAAC
ATCTTTTTTGGTTTCCAACTCCTTTACCAGGTAACAGATCTAATCCTCGA
CTTTCATGTTTTGCCCTTTTGTGTTATTCAAGAAGAAAAGTCTTTTCATC
GAATGAACTGAAGAAATATTTTAGAGGATCATGTTATACATATATGAAAG
ATATCCATTCGAACACCAGCCTTGATTTCGACTAAAACCTCAGATGGTTC
AAGTACATGTCGATTTCAAGCTTTAAATGGTCAGCTTAAAAAGGAACATT
TCAAAGTTCAACATGAAAATCCGAAATAAGAACAGCTGAGAACATTATTA
AGTGGTTCTTTTNAGCACCTCACTAAAagccgggatttttcatctcgttt
cttagtgagttccactttgacgattttcgaaaaatagaagcctttcaagt
gttttgacgcaaattcgctactgcaggagcttcgaaagttaaaagtgacg
tcaaaaaagacgttagagcccgaaaacccgggctccaaacattcgaaaaa
gtggcaaagtggaatagacggcaattgcgtaaaaaaaacgCGGATGACGC
CTAGTATAGGCTATAATCCCctcggctattaggtacccgagagtaggtag
ACTTTTCAATTTGTTAAGTATTTTTGAATTAATAATTTGTCATCATTTTC
GTAGGGGCCTAGCTCGGGCTTgtgattttgactttgtttttatctcaaTT
TAAAATTCAgtggaaaaaattgcactccgaaACCATCCGCACTGGATTTT
TTGACCTGGAAACAATAAAGTTTCTATCCCCTTGGAACAATATCCACCGA
GGCTGTTAGACATGGGTGTTTTAAAGTCTCTTTTGAGATACACGATAAAA
ACGAACAAGGCACATGTTACTTAATGTAAAATCATCGTTTTgatgaataa
ttattttttaggCACCCTCCTTTCTGGAATGTCCACATTGTTCTTTCTTG
GTTTGATCAACATCTTTTTCGGTTTCCAACTCCTTTATCAGGTAACAGAT
CCTATCCTCGATTTTCATGTTTTGCTCTTTTGTgttattcaagaaaaaat
gtcttttcatcgAATGAATTGAAGAGGTACTTTAGAGGATCGTGTTTAAT
TTGTAATACATATATGAAAGATATTAATTGAAACACCAGGCTTGATTTGG
ACTAAAACCTATGAATGAATTAAGACTAATGTGAGGCTCAGGTGTCGATT
TCAAGCTTTAAATGATCAGCTTAAAAAGGAACATTTCAAAGTTCAACATG
TAAATCCAAAATAAGGACAGCTGAGAACAGTgactggttcttataaataa
aaccttattttaaaGCAATACACCTATTAAATTCTTAATCGTGAGAAGGC
TGGGTTGGAGTTTACCCAGAAGAATCAACGTTGAAACCATGTTCGGTTTC
GTCAGGTTTCgtaaaccggttttttgacgtttccaattttgacgttcact
CAGTGTTTCgaaaccgtttcgtttcggagcgaagcATGGAACTTAGCGTT
AGAACTTGGTCTGAAACATCTGTATCTTTAAGGAAATCCATGCAAAGACT
TCGGGCATTTGACGTCATCTCTTCATGGTAAACTCTAACCAAGTTTTCTC
ACGCAGAAAGGGTTAATAAATATATAGCCTAAGGCTGAAACTCTAAACGT
GTGACCTGTATTTAACtcgatattttttattcatgatatgcaccaatagc
tgattggttgtaagtgacgtaaaatcagtcaatacgtcacattcaaccaa
tcagctgttgggtccgttgaagacattacaatggtaCATATCATGACTAT
GGCATTTTTATCACGTTTAGGTTCATTTGTACGGTGGCTTGTTATTATTC
TGTGGCTTTATCTTGTACGATACACAACTCATCATCGCCAAACACAAAAA
TGGAGACAATGATTTCTTATGGTAAGTAATAAGTTTTTTGTTTCTGTTCT
TGTTCCTGTCTTACTGAATAaataaaaagagatttttttcggTTTTAAAC
GTCCCAATGGGAATAGTTAAGTAGCACATTTTTTAATTGTCTTCTTCTGA
TTTTCTCTATACATttctccgggggggggggggggcccggggTTTGggag
ttttaaaaattttttgtccctggggggggtgatttttttttttttttggt
tttttcttttcttttccccgggggggggggtctctctaggtttgcgagat
ttcaaaaatttatgatcCTTGAGGgagttcatttttgattttcgtagtTT
TGGAACCCTTGTAGAGACTCAATTGGTTTTTGTACACCTTTGAAGGACTT
TCGAGTGTGTGAAAAAGGGATCCTAATGGTTGgtacatacccggcaccca
ttttgctaTGTATCCTCCCCCGGGACATTATTCTATAAACCCTTTGACAT
TTCTTTCCTCCGGTGTGTTAATTTTAAGTTTATATCTAAATTTAATCTTG
ACAATTGTTCTGTTAattctttcttcatttttaggCATTCAGTCGATTTG
TTTTTGGATTTCATCAATATCTTCCGAAGAATTATGATCATTCTTGCAAA
CAAAGTAAGGGTTTCATTATcaacatttcaaatttctctttcaatttctt
tgaaCATTTGTTGCAACTTTTACATAAAAAGAATGGGCGAAATTAATATT
ATTTTTATGTGGGGTGAAGGAtgtattggatattttgtccgggggctACC
ccctgaaaaatctgcaaagtTTGCCTTGCTTTTGGGACAAATTTGCTCTG
TTTatgggtaattttgaatgtcctgGGGTTAACTGATGCttttccggggg
taaatttccaaaagacaTCTACGTGACATTGAAAATCTTAAAACCCCTGG
AAATGAACCATTCTACTTTGCAGTATTGAACCATTGAACACGATAATGTC
tcttgaaaactttgaaagcttcttgaaaatcttgaaaagcaTGATCATCA
TAGCATGCGTTTGTCTTGTTTTTTGTTCAGATTATTACAGCATTTGAGAC
TTTGTTTTACCTTACACAAACCTTTGAAACAGAGAGCAAATGGAGAGTTT
GATTTAAAGAAGCATCGAAACTATCCAAATGCCGCGACAAAATAAGTTGA
ACCATCTGAAACTACCTGTACCATCATCCCTTCCGATAGTACTATCAGAG
ACTCTGGCTTCATAGATAAAATAATTAATTGCAGTCGTTATCATAATATT
TAAAGATCATTTTCTGtgctttttttcaggaaaacaAGAAGAGTAAGAAG
AAGAACTGAATTCAATAAGAGATACTTGATGCAATGTTATCGCAAATTTA
TTCCTCAATTCTTGGGTTTTAATATGGAAATCAGACTGTACTTTCTTTTT
TTGTAGCATCAAAAGTTTATACTTTGAAGTAATGCAAGNAATGTTATCGC
AAATTTATTCCTCAATTTTAATATGGAAATCAGACTGTACTTTCTTTTTT
TGTAGCATCAAAAGTTTATACTTGGAAGTAATGCAAGCATAATGTACTGT
AAAATAAATCATCGTGATCTTTATTCGAGTAAATAAATATACCATTCTGT
TGAAATTCTATTCtttgcattttgttttgaaattt

Coding sequence (CDS) from alignment at scaffold_247:82006..92940+

>TCONS_00054944 ID=TCONS_00054944|Name=TCONS_00054944|organism=Clytia hemisphaerica|type=CDS|length=7887bp|location=Sequence derived from alignment at scaffold_247:82006..92940+ (Clytia hemisphaerica)
ATGGATGCCTTTTTTGGTGAAAGATCTATTTCCTTATCTGCTTTGACTGA
TTTTTCAAAGTTggATGTATCTACaaagaaacatttgaaaaatgtatATG
GTGCCTTATCATTATCCATGCTGTCAGCCAGTGTTGGTGCTGGTCTTCAC
TTGTATAGTGGATTGAACTTGgGAATACTTGCTCTCCTTGGTGGTATTGG
ATTCATGCTTGGGCTAGCATTCACACCAAATGAATCAAAGAACCAAATGA
CCCGTTTAGGATGTTTGTTAGGTTTTGCAGGCTGCACAGGTTTGTCAATG
GGACCATTATTGGATGCTGTAATCAGTATTAACCCCAGCATCGTAACTAC
AGCATTCTTTGCCACCTGTGTCATCTTCATTTGTTTCACCTTGAGTGCAT
TATGGGCTGAGGAAAGAACATATTTGTATCTTGGTGGCACCCTCCTTTCT
GGAATGTCCACATTGTTCTTTCTTGGTTTGATCAACATCTTTTTCGGTTT
CCAACTCCTTTATCAGGTTCATTTGTACGGTGGCTTGTTATTATTCTGTG
GCTTTATCTTGTACGATACACAACTCATCATCGCCAAACACAAAAATGGA
GACAATGATTTCTTATGgCATTCAGTCGATTTGTTTTTGGATTTCATCAA
TATCTTCCGAAGAATTATGATCATTCTTGCAAACAAAgaaaacaAGAAGA
GTAAGAAGAAGAACTGAATGGATGCCTTTTTTGGTGAAAGATCTATTTCC
TTATCTGCTTTGACTGATTTTTCAAAGTTggATGTATCTACaaagaaaca
tttgaaaaatgtatATGGTGCCTTATCATTATCCATGCTGTCAGCCAGTG
TTGGTGCTGGTCTTCACTTGTATAGTGGATTGAACTTGgGAATACTTGCT
CTCCTTGGTGGTATTGGATTCATGCTTGGGCTAGCATTCACACCAAATGA
ATCAAAGAACCAAATGACCCGTTTAGGATGTTTGTTAGGTTTTGCAGGCT
GCACAGGTTTGTCAATGGGACCATTATTGGATGCTGTAATCAGTATTAAC
CCCAGCATCGTAACTACAGCATTCTTTGCCACCTGTGTCATCTTCATTTG
TTTCACCTTGAGTGCATTATGGGCTGAGGAAAGAACATATTTGTATCTTG
GTGGCACCCTCCTTTCTGGAATGTCCACATTGTTCTTTCTTGGTTTGATC
AACATCTTTTTCGGTTTCCAACTCCTTTATCAGGTTCATTTGTACGGTGG
CTTGTTATTATTCTGTGGCTTTATCTTGTACGATACACAACTCATCATCG
CCAAACACAAAAATGGAGACAATGATTTCTTATGgCATTCAGTCGATTTG
TTTTTGGATTTCATCAATATCTTCCGAAGAATTATGATCATTCTTGCAAA
CAAAgaaaacaAGAAGAGTAAGAAGAAGAACTGAATGGATGCCTTTTTTG
GTGAAAGATCTATTTCCTTATCTGCTTTGACTGATTTTTCAAAGTTggAT
GTATCTACaaagaaacatttgaaaaatgtatATGGTGCCTTATCATTATC
CATGCTGTCAGCCAGTGTTGGTGCTGGTCTTCACTTGTATAGTGGATTGA
ACTTGgGAATACTTGCTCTCCTTGGTGGTATTGGATTCATGCTTGGGCTA
GCATTCACACCAAATGAATCAAAGAACCAAATGACCCGTTTAGGATGTTT
GTTAGGTTTTGCAGGCTGCACAGGTTTGTCAATGGGACCATTATTGGATG
CTGTAATCAGTATTAACCCCAGCATCGTAACTACAGCATTCTTTGCCACC
TGTGTCATCTTCATTTGTTTCACCTTGAGTGCATTATGGGCTGAGGAAAG
AACATATTTGTATCTTGGTGGCACCCTCCTTTCTGGAATGTCCACATTGT
TCTTTCTTGGTTTGATCAACATCTTTTTCGGTTTCCAACTCCTTTATCAG
GTTCATTTGTACGGTGGCTTGTTATTATTCTGTGGCTTTATCTTGTACGA
TACACAACTCATCATCGCCAAACACAAAAATGGAGACAATGATTTCTTAT
GgCATTCAGTCGATTTGTTTTTGGATTTCATCAATATCTTCCGAAGAATT
ATGATCATTCTTGCAAACAAAgaaaacaAGAAGAGTAAGAAGAAGAACTG
AATGGATGCCTTTTTTGGTGAAAGATCTATTTCCTTATCTGCTTTGACTG
ATTTTTCAAAGTTggATGTATCTACaaagaaacatttgaaaaatgtatAT
GGTGCCTTATCATTATCCATGCTGTCAGCCAGTGTTGGTGCTGGTCTTCA
CTTGTATAGTGGATTGAACTTGgGAATACTTGCTCTCCTTGGTGGTATTG
GATTCATGCTTGGGCTAGCATTCACACCAAATGAATCAAAGAACCAAATG
ACCCGTTTAGGATGTTTGTTAGGTTTTGCAGGCTGCACAGGTTTGTCAAT
GGGACCATTATTGGATGCTGTAATCAGTATTAACCCCAGCATCGTAACTA
CAGCATTCTTTGCCACCTGTGTCATCTTCATTTGTTTCACCTTGAGTGCA
TTATGGGCTGAGGAAAGAACATATTTGTATCTTGGTGGCACCCTCCTTTC
TGGAATGTCCACATTGTTCTTTCTTGGTTTGATCAACATCTTTTTCGGTT
TCCAACTCCTTTATCAGGTTCATTTGTACGGTGGCTTGTTATTATTCTGT
GGCTTTATCTTGTACGATACACAACTCATCATCGCCAAACACAAAAATGG
AGACAATGATTTCTTATGgCATTCAGTCGATTTGTTTTTGGATTTCATCA
ATATCTTCCGAAGAATTATGATCATTCTTGCAAACAAAgaaaacaAGAAG
AGTAAGAAGAAGAACTGAATGGATGCCTTTTTTGGTGAAAGATCTATTTC
CTTATCTGCTTTGACTGATTTTTCAAAGTTggATGTATCTACaaagaaac
atttgaaaaatgtatATGGTGCCTTATCATTATCCATGCTGTCAGCCAGT
GTTGGTGCTGGTCTTCACTTGTATAGTGGATTGAACTTGgGAATACTTGC
TCTCCTTGGTGGTATTGGATTCATGCTTGGGCTAGCATTCACACCAAATG
AATCAAAGAACCAAATGACCCGTTTAGGATGTTTGTTAGGTTTTGCAGGC
TGCACAGGTTTGTCAATGGGACCATTATTGGATGCTGTAATCAGTATTAA
CCCCAGCATCGTAACTACAGCATTCTTTGCCACCTGTGTCATCTTCATTT
GTTTCACCTTGAGTGCATTATGGGCTGAGGAAAGAACATATTTGTATCTT
GGTGGCACCCTCCTTTCTGGAATGTCCACATTGTTCTTTCTTGGTTTGAT
CAACATCTTTTTCGGTTTCCAACTCCTTTATCAGGTTCATTTGTACGGTG
GCTTGTTATTATTCTGTGGCTTTATCTTGTACGATACACAACTCATCATC
GCCAAACACAAAAATGGAGACAATGATTTCTTATGgCATTCAGTCGATTT
GTTTTTGGATTTCATCAATATCTTCCGAAGAATTATGATCATTCTTGCAA
ACAAAgaaaacaAGAAGAGTAAGAAGAAGAACTGAATGGATGCCTTTTTT
GGTGAAAGATCTATTTCCTTATCTGCTTTGACTGATTTTTCAAAGTTggA
TGTATCTACaaagaaacatttgaaaaatgtatATGGTGCCTTATCATTAT
CCATGCTGTCAGCCAGTGTTGGTGCTGGTCTTCACTTGTATAGTGGATTG
AACTTGgGAATACTTGCTCTCCTTGGTGGTATTGGATTCATGCTTGGGCT
AGCATTCACACCAAATGAATCAAAGAACCAAATGACCCGTTTAGGATGTT
TGTTAGGTTTTGCAGGCTGCACAGGTTTGTCAATGGGACCATTATTGGAT
GCTGTAATCAGTATTAACCCCAGCATCGTAACTACAGCATTCTTTGCCAC
CTGTGTCATCTTCATTTGTTTCACCTTGAGTGCATTATGGGCTGAGGAAA
GAACATATTTGTATCTTGGTGGCACCCTCCTTTCTGGAATGTCCACATTG
TTCTTTCTTGGTTTGATCAACATCTTTTTCGGTTTCCAACTCCTTTATCA
GGTTCATTTGTACGGTGGCTTGTTATTATTCTGTGGCTTTATCTTGTACG
ATACACAACTCATCATCGCCAAACACAAAAATGGAGACAATGATTTCTTA
TGgCATTCAGTCGATTTGTTTTTGGATTTCATCAATATCTTCCGAAGAAT
TATGATCATTCTTGCAAACAAAgaaaacaAGAAGAGTAAGAAGAAGAACT
GAATGGATGCCTTTTTTGGTGAAAGATCTATTTCCTTATCTGCTTTGACT
GATTTTTCAAAGTTggATGTATCTACaaagaaacatttgaaaaatgtatA
TGGTGCCTTATCATTATCCATGCTGTCAGCCAGTGTTGGTGCTGGTCTTC
ACTTGTATAGTGGATTGAACTTGgGAATACTTGCTCTCCTTGGTGGTATT
GGATTCATGCTTGGGCTAGCATTCACACCAAATGAATCAAAGAACCAAAT
GACCCGTTTAGGATGTTTGTTAGGTTTTGCAGGCTGCACAGGTTTGTCAA
TGGGACCATTATTGGATGCTGTAATCAGTATTAACCCCAGCATCGTAACT
ACAGCATTCTTTGCCACCTGTGTCATCTTCATTTGTTTCACCTTGAGTGC
ATTATGGGCTGAGGAAAGAACATATTTGTATCTTGGTGGCACCCTCCTTT
CTGGAATGTCCACATTGTTCTTTCTTGGTTTGATCAACATCTTTTTCGGT
TTCCAACTCCTTTATCAGGTTCATTTGTACGGTGGCTTGTTATTATTCTG
TGGCTTTATCTTGTACGATACACAACTCATCATCGCCAAACACAAAAATG
GAGACAATGATTTCTTATGgCATTCAGTCGATTTGTTTTTGGATTTCATC
AATATCTTCCGAAGAATTATGATCATTCTTGCAAACAAAgaaaacaAGAA
GAGTAAGAAGAAGAACTGAATGGATGCCTTTTTTGGTGAAAGATCTATTT
CCTTATCTGCTTTGACTGATTTTTCAAAGTTggATGTATCTACaaagaaa
catttgaaaaatgtatATGGTGCCTTATCATTATCCATGCTGTCAGCCAG
TGTTGGTGCTGGTCTTCACTTGTATAGTGGATTGAACTTGgGAATACTTG
CTCTCCTTGGTGGTATTGGATTCATGCTTGGGCTAGCATTCACACCAAAT
GAATCAAAGAACCAAATGACCCGTTTAGGATGTTTGTTAGGTTTTGCAGG
CTGCACAGGTTTGTCAATGGGACCATTATTGGATGCTGTAATCAGTATTA
ACCCCAGCATCGTAACTACAGCATTCTTTGCCACCTGTGTCATCTTCATT
TGTTTCACCTTGAGTGCATTATGGGCTGAGGAAAGAACATATTTGTATCT
TGGTGGCACCCTCCTTTCTGGAATGTCCACATTGTTCTTTCTTGGTTTGA
TCAACATCTTTTTCGGTTTCCAACTCCTTTATCAGGTTCATTTGTACGGT
GGCTTGTTATTATTCTGTGGCTTTATCTTGTACGATACACAACTCATCAT
CGCCAAACACAAAAATGGAGACAATGATTTCTTATGgCATTCAGTCGATT
TGTTTTTGGATTTCATCAATATCTTCCGAAGAATTATGATCATTCTTGCA
AACAAAgaaaacaAGAAGAGTAAGAAGAAGAACTGAATGGATGCCTTTTT
TGGTGAAAGATCTATTTCCTTATCTGCTTTGACTGATTTTTCAAAGTTgg
ATGTATCTACaaagaaacatttgaaaaatgtatATGGTGCCTTATCATTA
TCCATGCTGTCAGCCAGTGTTGGTGCTGGTCTTCACTTGTATAGTGGATT
GAACTTGgGAATACTTGCTCTCCTTGGTGGTATTGGATTCATGCTTGGGC
TAGCATTCACACCAAATGAATCAAAGAACCAAATGACCCGTTTAGGATGT
TTGTTAGGTTTTGCAGGCTGCACAGGTTTGTCAATGGGACCATTATTGGA
TGCTGTAATCAGTATTAACCCCAGCATCGTAACTACAGCATTCTTTGCCA
CCTGTGTCATCTTCATTTGTTTCACCTTGAGTGCATTATGGGCTGAGGAA
AGAACATATTTGTATCTTGGTGGCACCCTCCTTTCTGGAATGTCCACATT
GTTCTTTCTTGGTTTGATCAACATCTTTTTCGGTTTCCAACTCCTTTATC
AGGTTCATTTGTACGGTGGCTTGTTATTATTCTGTGGCTTTATCTTGTAC
GATACACAACTCATCATCGCCAAACACAAAAATGGAGACAATGATTTCTT
ATGgCATTCAGTCGATTTGTTTTTGGATTTCATCAATATCTTCCGAAGAA
TTATGATCATTCTTGCAAACAAAgaaaacaAGAAGAGTAAGAAGAAGAAC
TGAATGGATGCCTTTTTTGGTGAAAGATCTATTTCCTTATCTGCTTTGAC
TGATTTTTCAAAGTTggATGTATCTACaaagaaacatttgaaaaatgtat
ATGGTGCCTTATCATTATCCATGCTGTCAGCCAGTGTTGGTGCTGGTCTT
CACTTGTATAGTGGATTGAACTTGgGAATACTTGCTCTCCTTGGTGGTAT
TGGATTCATGCTTGGGCTAGCATTCACACCAAATGAATCAAAGAACCAAA
TGACCCGTTTAGGATGTTTGTTAGGTTTTGCAGGCTGCACAGGTTTGTCA
ATGGGACCATTATTGGATGCTGTAATCAGTATTAACCCCAGCATCGTAAC
TACAGCATTCTTTGCCACCTGTGTCATCTTCATTTGTTTCACCTTGAGTG
CATTATGGGCTGAGGAAAGAACATATTTGTATCTTGGTGGCACCCTCCTT
TCTGGAATGTCCACATTGTTCTTTCTTGGTTTGATCAACATCTTTTTCGG
TTTCCAACTCCTTTATCAGGTTCATTTGTACGGTGGCTTGTTATTATTCT
GTGGCTTTATCTTGTACGATACACAACTCATCATCGCCAAACACAAAAAT
GGAGACAATGATTTCTTATGgCATTCAGTCGATTTGTTTTTGGATTTCAT
CAATATCTTCCGAAGAATTATGATCATTCTTGCAAACAAAgaaaacaAGA
AGAGTAAGAAGAAGAACTGAATGGATGCCTTTTTTGGTGAAAGATCTATT
TCCTTATCTGCTTTGACTGATTTTTCAAAGTTggATGTATCTACaaagaa
acatttgaaaaatgtatATGGTGCCTTATCATTATCCATGCTGTCAGCCA
GTGTTGGTGCTGGTCTTCACTTGTATAGTGGATTGAACTTGgGAATACTT
GCTCTCCTTGGTGGTATTGGATTCATGCTTGGGCTAGCATTCACACCAAA
TGAATCAAAGAACCAAATGACCCGTTTAGGATGTTTGTTAGGTTTTGCAG
GCTGCACAGGTTTGTCAATGGGACCATTATTGGATGCTGTAATCAGTATT
AACCCCAGCATCGTAACTACAGCATTCTTTGCCACCTGTGTCATCTTCAT
TTGTTTCACCTTGAGTGCATTATGGGCTGAGGAAAGAACATATTTGTATC
TTGGTGGCACCCTCCTTTCTGGAATGTCCACATTGTTCTTTCTTGGTTTG
ATCAACATCTTTTTCGGTTTCCAACTCCTTTATCAGGTTCATTTGTACGG
TGGCTTGTTATTATTCTGTGGCTTTATCTTGTACGATACACAACTCATCA
TCGCCAAACACAAAAATGGAGACAATGATTTCTTATGgCATTCAGTCGAT
TTGTTTTTGGATTTCATCAATATCTTCCGAAGAATTATGATCATTCTTGC
AAACAAAgaaaacaAGAAGAGTAAGAAGAAGAACTGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034627XLOC_034627Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054944-proteinTCONS_00054944-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054944-exon-scaffold_247-1491911889:82006..82203TCONS_00054944-exon-scaffold_247-1491911889:82006..82203Clytia hemisphaericaexon
TCONS_00054944-exon-scaffold_247-1510915933:82006..82203TCONS_00054944-exon-scaffold_247-1510915933:82006..82203Clytia hemisphaericaexon
TCONS_00054944-exon-scaffold_247-1575043694:82006..82203TCONS_00054944-exon-scaffold_247-1575043694:82006..82203Clytia hemisphaericaexon
TCONS_00054944-exon-scaffold_247-1491911889:87079..87187TCONS_00054944-exon-scaffold_247-1491911889:87079..87187Clytia hemisphaericaexon
TCONS_00054944-exon-scaffold_247-1510915933:87079..87187TCONS_00054944-exon-scaffold_247-1510915933:87079..87187Clytia hemisphaericaexon
TCONS_00054944-exon-scaffold_247-1575043694:87079..87187TCONS_00054944-exon-scaffold_247-1575043694:87079..87187Clytia hemisphaericaexon
TCONS_00054944-exon-scaffold_247-1491911889:87666..87753TCONS_00054944-exon-scaffold_247-1491911889:87666..87753Clytia hemisphaericaexon
TCONS_00054944-exon-scaffold_247-1510915933:87666..87753TCONS_00054944-exon-scaffold_247-1510915933:87666..87753Clytia hemisphaericaexon
TCONS_00054944-exon-scaffold_247-1575043694:87666..87753TCONS_00054944-exon-scaffold_247-1575043694:87666..87753Clytia hemisphaericaexon
TCONS_00054944-exon-scaffold_247-1491911889:88189..88218TCONS_00054944-exon-scaffold_247-1491911889:88189..88218Clytia hemisphaericaexon
TCONS_00054944-exon-scaffold_247-1510915933:88189..88218TCONS_00054944-exon-scaffold_247-1510915933:88189..88218Clytia hemisphaericaexon
TCONS_00054944-exon-scaffold_247-1575043694:88189..88218TCONS_00054944-exon-scaffold_247-1575043694:88189..88218Clytia hemisphaericaexon
TCONS_00054944-exon-scaffold_247-1491911889:88426..88474TCONS_00054944-exon-scaffold_247-1491911889:88426..88474Clytia hemisphaericaexon
TCONS_00054944-exon-scaffold_247-1510915933:88426..88474TCONS_00054944-exon-scaffold_247-1510915933:88426..88474Clytia hemisphaericaexon
TCONS_00054944-exon-scaffold_247-1575043694:88426..88474TCONS_00054944-exon-scaffold_247-1575043694:88426..88474Clytia hemisphaericaexon
TCONS_00054944-exon-scaffold_247-1491911889:88907..89004TCONS_00054944-exon-scaffold_247-1491911889:88907..89004Clytia hemisphaericaexon
TCONS_00054944-exon-scaffold_247-1510915933:88907..89004TCONS_00054944-exon-scaffold_247-1510915933:88907..89004Clytia hemisphaericaexon
TCONS_00054944-exon-scaffold_247-1575043694:88907..89004TCONS_00054944-exon-scaffold_247-1575043694:88907..89004Clytia hemisphaericaexon
TCONS_00054944-exon-scaffold_247-1491911889:89306..89355TCONS_00054944-exon-scaffold_247-1491911889:89306..89355Clytia hemisphaericaexon
TCONS_00054944-exon-scaffold_247-1510915933:89306..89355TCONS_00054944-exon-scaffold_247-1510915933:89306..89355Clytia hemisphaericaexon
TCONS_00054944-exon-scaffold_247-1575043694:89306..89355TCONS_00054944-exon-scaffold_247-1575043694:89306..89355Clytia hemisphaericaexon
TCONS_00054944-exon-scaffold_247-1491911889:90317..90346TCONS_00054944-exon-scaffold_247-1491911889:90317..90346Clytia hemisphaericaexon
TCONS_00054944-exon-scaffold_247-1510915933:90317..90346TCONS_00054944-exon-scaffold_247-1510915933:90317..90346Clytia hemisphaericaexon
TCONS_00054944-exon-scaffold_247-1575043694:90317..90346TCONS_00054944-exon-scaffold_247-1575043694:90317..90346Clytia hemisphaericaexon
TCONS_00054944-exon-scaffold_247-1491911889:91176..91276TCONS_00054944-exon-scaffold_247-1491911889:91176..91276Clytia hemisphaericaexon
TCONS_00054944-exon-scaffold_247-1510915933:91176..91276TCONS_00054944-exon-scaffold_247-1510915933:91176..91276Clytia hemisphaericaexon
TCONS_00054944-exon-scaffold_247-1575043694:91176..91276TCONS_00054944-exon-scaffold_247-1575043694:91176..91276Clytia hemisphaericaexon
TCONS_00054944-exon-scaffold_247-1491911889:91840..91909TCONS_00054944-exon-scaffold_247-1491911889:91840..91909Clytia hemisphaericaexon
TCONS_00054944-exon-scaffold_247-1510915933:91840..91909TCONS_00054944-exon-scaffold_247-1510915933:91840..91909Clytia hemisphaericaexon
TCONS_00054944-exon-scaffold_247-1575043694:91840..91909TCONS_00054944-exon-scaffold_247-1575043694:91840..91909Clytia hemisphaericaexon
TCONS_00054944-exon-scaffold_247-1491911889:92585..92940TCONS_00054944-exon-scaffold_247-1491911889:92585..92940Clytia hemisphaericaexon
TCONS_00054944-exon-scaffold_247-1510915933:92585..92940TCONS_00054944-exon-scaffold_247-1510915933:92585..92940Clytia hemisphaericaexon
TCONS_00054944-exon-scaffold_247-1575043694:92585..92940TCONS_00054944-exon-scaffold_247-1575043694:92585..92940Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_247supercontigscaffold_247:82006..92940 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
347.392	341.855	250.973	169.077	66.519	45.959	143.57	117.301	213.473	185.651	228.072	170.433	225.004	203.774	161.243	162.997	147.705	162.156	219.337	292.673	265.415	239.839	199.366	227.094	176.524	185.635	351.157	386.328	222.573	203.675
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR006214Bax_inhibitor_1-related
Blast
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BLAST of TCONS_00054944 vs. Swiss-Prot (Human)
Match: BI1 (Bax inhibitor 1 OS=Homo sapiens GN=TMBIM6 PE=1 SV=2)

HSP 1 Score: 166.392 bits (420), Expect = 3.833e-48
Identity = 105/222 (47.30%), Postives = 149/222 (67.12%), Query Frame = 2 
Query:  155 ERSISLSALTDFSKLDVSTKKHLKNVYGALSLSMLSASVGAGLHLYSXXXXXXXXXXXXXXXXXX-XXXTPNESKNQMTRLGCLLGFAGCTGLSMGPLLDAVISINPSIVTTAFFATCVIFICFTLSALWAEERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYQVHLYGGLLLFCGFILYDTQLIIAKHKNGDNDFLWHSVDLFLDFINIFRRIMIILA 817
            +R I+  AL  FS +  ST++HLK VY + +L M  A+ GA +H+ +      L    G   ++  L  TP+  + +  RLG L GFA  TG+ +GP L+  I++NPSI+ TAF  T +IF CFTLSAL+A  R+YL+LGG L+S +S L    L N+FFG   L+Q +LY GL++ CGF+L+DTQLII K ++GD D++WH +DLFLDFI +FR++M+ILA
Sbjct:    5 DRKINFDALLKFSHITPSTQQHLKKVYASFALCMFVAAAGAYVHMVTHFIQAGLLSALGSLILMIWLMATPHSHETEQKRLGLLAGFAFLTGVGLGPALEFCIAVNPSILPTAFMGTAMIFTCFTLSALYARRRSYLFLGGILMSALSLLLLSSLGNVFFGSIWLFQANLYVGLVVMCGFVLFDTQLIIEKAEHGDQDYIWHCIDLFLDFITVFRKLMMILA 226
The following BLAST results are available for this feature:
BLAST of TCONS_00054944 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
BI13.833e-4847.30Bax inhibitor 1 OS=Homo sapiens GN=TMBIM6 PE=1 SV=... [more]
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