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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00054947 ID=TCONS_00054947|Name=TCONS_00054947|organism=Clytia hemisphaerica|type=transcript|length=998bp
TTACacgaaatatttcaatttgtgttaataaaatgactagtaatatttgt
ATAATAAGGTATCTTTTATATTGTTTTACTTCAAGTTGTCAGCTGGTCAT
GGTatttgacaatcaaacaaaagattttctgaaaaaggtcTTGTAAACAA
TTAAACATTTCACAGACAAGAGTATGAGACATTTAAAAAGAATGAAAGTT
GTTGATTTGCTGAGACATGCTCAAACAAACTTTAATATCAAGAAAGATGT
CATTTCAAAGAATATTCCTATAAATTCTACTGGTTTAAAACAATGCCAAG
AAAGTGAAATTTCTAAACATTATGAAATGGTAGTGTGTTCACCAATGCGC
AGGTGCAAAGAAACGCTTGCCAACATTCAAGGAATCACTTATAATCAGAT
AGTTCATTCCGATCTTTGTAGGGAACATCAAATTGCTAATTGTGACTTTC
TGGAGCATGAAGATGAAAATATCCTTGAAAGTGAAGAGGAATTACTTAAT
CGTGTAGAGAAGTTTCGACAATTTTTATTAACTTTGAAAGAGGATAAAAT
TCTTGTTGTTTCCCATGGTGATTTTTTGTGGAATTTGACAGCCAAAAAAG
TTGATGATGAACGTTTTGGACAATGGCTTGATAATTGTCAACTCTATGAA
TTTGAGTTAGATTtggattgatttaaaaaattattcgaaaaaatctttct
atttgaaatttttatgttACCTTGTCTTTGTAAATCTTTGTGCTTCTGTT
ACCATATATCATTGCTTTTATCATTCAACTCAAattatattttgaagaaa
aaactggatttattttagtagtgaaattttcttaaaaaatattaacaaaa
tgacggattttttataatatttttttacctAGAGATAAataataatatat
ttttatgCAAGCAATCTATTCCAATTTATGTTACTGATGTATATATTGAC
ATATTTTTGACCATATTTTACCTTTGCTGAATATGTTGTGAAAGTATG Run BLAST on NCBI transcript from alignment at scaffold_247:111170..112167+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00054947 ID=TCONS_00054947|Name=TCONS_00054947|organism=Clytia hemisphaerica|type=transcript|length=998bp|location=Sequence derived from alignment at scaffold_247:111170..112167+ (Clytia hemisphaerica)
TTACacgaaatatttcaatttgtgttaataaaatgactagtaatatttgt
ATAATAAGGTATCTTTTATATTGTTTTACTTCAAGTTGTCAGCTGGTCAT
GGTatttgacaatcaaacaaaagattttctgaaaaaggtcTTGTAAACAA
TTAAACATTTCACAGACAAGAGTATGAGACATTTAAAAAGAATGAAAGTT
GTTGATTTGCTGAGACATGCTCAAACAAACTTTAATATCAAGAAAGATGT
CATTTCAAAGAATATTCCTATAAATTCTACTGGTTTAAAACAATGCCAAG
AAAGTGAAATTTCTAAACATTATGAAATGGTAGTGTGTTCACCAATGCGC
AGGTGCAAAGAAACGCTTGCCAACATTCAAGGAATCACTTATAATCAGAT
AGTTCATTCCGATCTTTGTAGGGAACATCAAATTGCTAATTGTGACTTTC
TGGAGCATGAAGATGAAAATATCCTTGAAAGTGAAGAGGAATTACTTAAT
CGTGTAGAGAAGTTTCGACAATTTTTATTAACTTTGAAAGAGGATAAAAT
TCTTGTTGTTTCCCATGGTGATTTTTTGTGGAATTTGACAGCCAAAAAAG
TTGATGATGAACGTTTTGGACAATGGCTTGATAATTGTCAACTCTATGAA
TTTGAGTTAGATTtggattgatttaaaaaattattcgaaaaaatctttct
atttgaaatttttatgttACCTTGTCTTTGTAAATCTTTGTGCTTCTGTT
ACCATATATCATTGCTTTTATCATTCAACTCAAattatattttgaagaaa
aaactggatttattttagtagtgaaattttcttaaaaaatattaacaaaa
tgacggattttttataatatttttttacctAGAGATAAataataatatat
ttttatgCAAGCAATCTATTCCAATTTATGTTACTGATGTATATATTGAC
ATATTTTTGACCATATTTTACCTTTGCTGAATATGTTGTGAAAGTATG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00054947-exon-scaffold_247-1491911889:111170..112167 | TCONS_00054947-exon-scaffold_247-1491911889:111170..112167 | Clytia hemisphaerica | exon |
| TCONS_00054947-exon-scaffold_247-1510915933:111170..112167 | TCONS_00054947-exon-scaffold_247-1510915933:111170..112167 | Clytia hemisphaerica | exon |
| TCONS_00054947-exon-scaffold_247-1575043694:111170..112167 | TCONS_00054947-exon-scaffold_247-1575043694:111170..112167 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_247 | supercontig | scaffold_247:111170..112167 + |
Blast
The following BLAST results are available for this feature:
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