TCONS_00054949 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054949
Unique NameTCONS_00054949
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1774

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054949 ID=TCONS_00054949|Name=TCONS_00054949|organism=Clytia hemisphaerica|type=transcript|length=1774bp
GTGCGATTTCTGTTCCATCATGCCGATCTGTGCAAGGTATAAAATCAGTG
AAGTTTACACAAAATCATTTGAATAGCAATCAAACTTGGTCAGGTGGAAG
CACACTCAAATATAACAGCAGAAGTTGGAAAATAACTTTGGTTGAGGGAT
CCGAGATGTCAAATTATTGCTTTCTCCTGATTTTGATGGTATTTTCTTTC
CAAGTTGTCGATGGGTTGAGCATTGTCCGGTCAGGATCTAAAGATACAAA
AGATCTGACTGCATTGTTGAAAGTCCAGCGTGACAGGGACAACGTCACTT
GTCAAAATTTGTACAAGGTCTACTGGCTAGTCAAGAAAGATCAGTTCAGT
GTTGCATCACCCAAACAAAACATTAACTACGTCATTCAAGCCTGCAAACC
AGATATCACAAACTTATTCTGCGCGGATGAAAGTAACGATCAAATTTGGA
CAGCTGTCcgattttgtgacgtcattccGAATTCTGACTTCATTGTGTGT
AAAATTTTTCCGAAAGGATTCGAATCGTACAACCATTTCGCGAATTGGAC
GATGGAATCTTTTATCTACAAAGTTCGCGGAGAGGATGCTGGGAAATCTG
TACAAATGAATACAAAAAGTTTGGTCATCACACCTTTCTACAGATGTCCG
AGAATCAAACTTGTCCGGCCAAGCCATCAATTATTCAACTAAAAGCGAAC
AGAATCTTACAGACGATCAAAGGAGACTCCTGATCCTCAAAATTctttaa
aagaataaattttAATCCCATATCGCAATTTTTTTCCACAGTCAAAACAA
GATTGGGAGTTTTCCATTATTGAAGGTCTGTAAGACGCATGAACTGGACC
CGACTTAATGAATATGAAACAACCAAAAGATTCTTGACGATAAATCAAGA
GcaacattttattttatattcgTATCATTACACTTAGTTTTTTAATCCTG
CTAAGAGACCAACTTCATTGTATCCCAAAAAAAAGGGCAAATTTTAAATG
AAGTAAAATCCGCATAGTTTATGTAGaattttatgacttgtataactgat
attgggctcttccagaaaaaatccgttcatggggggtggaggatgaattg
tccaggggtatttaaaaaataccaaaaaaatgcaatgtccagggggtaat
tttttgtgtccacggggttgatttgatgtttgtccaggggtataacccgt
gtccaaggggttaaaaatcaaaatatccaggggtaattcatgaaaaaaat
aatatatcctccaccccccatgaacggattttttctggaagagcccattt
caaGCTCAAAAACATTCAATCATTTTGGGACTATCTATTGATTAAACAGA
GTAttgttattttatttcaatcattCTAAGCCAAGTTCTCAGATAACgag
ttttgaagattttacttTATGTAAAAGtttgtccgctttttttgggacac
actgtatctAACATCGTAGGCAGGAAAATGCTTAAGACCACTTATAACGA
ATTCTTTCTCAAAGTTTTCTCAAAGACAATTTAAATCAGCCTTGGATTGA
GACAATCATGCATATCTTTTTTGCATTGCCTTTTCATAAGTTTATAGCTT
TGAGGTATTTTATTGGGCTATTTcaattaaatattttatttgctGTTATA
TAACCTTAATatatatttcattatttttaaacCGTATGTCAAcccaaaat
ttttataattattcTTTACTTTAAGCACATGTATTTACTCATTTCAATAA
ATTATAACCGACTTTGCAATTTCA
Run BLAST on NCBI

protein sequence of TCONS_00054949-protein

>TCONS_00054949-protein ID=TCONS_00054949-protein|Name=TCONS_00054949-protein|organism=Clytia hemisphaerica|type=polypeptide|length=229bp
AISVPSCRSVQGIKSVKFTQNHLNSNQTWSGGSTLKYNSRSWKITLVEGS
EMSNYCFLLILMVFSFQVVDGLSIVRSGSKDTKDLTALLKVQRDRDNVTC
QNLYKVYWLVKKDQFSVASPKQNINYVIQACKPDITNLFCADESNDQIWT
AVRFCDVIPNSDFIVCKIFPKGFESYNHFANWTMESFIYKVRGEDAGKSV
QMNTKSLVITPFYRCPRIKLVRPSHQLFN
Run BLAST on NCBI

transcript from alignment at scaffold_247:242151..249568+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054949 ID=TCONS_00054949|Name=TCONS_00054949|organism=Clytia hemisphaerica|type=transcript|length=7418bp|location=Sequence derived from alignment at scaffold_247:242151..249568+ (Clytia hemisphaerica)
GTGCGATTTCTGTTCCATCATGCCGATCTGTGCAAGGTATAAAATCAGTG AAGTTTACACAAAATCATTTGAATAGCAATCAAACTTGGTCAGGTGGAAG CACACTCAAATATAACAGCAGAAGTTGGAAAATAACTTTGGTTGAGGGAT CCGAGATGTCAAATTATTGCTTTCTCCTGATTTTGATGGTATTTTCTTTC CAAGGTAGGTGAATGCGCTGAAAATAGGGCTATTTAATCAGATAATAGGG CTATTTAATCATGAAAAAAACGTGAAACTCTTGATTTTAAGGTCCTTGAC AAAGAGGCACAGTTTGTCGGTTGGGTAAACGTGACAGGTGTTAGTTAAAT GGACAATCAGGAAGTCAGAGGATTATTTTTACCTGgagatttgatttatt tttctaacGAATTTAAAACATTAAACCAGAGTACAGAGTACAGTAAATGA CCATGTTCATAAGATCATCAGGTTTTATAATTGTGTATACCGCAAGacct atttccaaaaaaaaaggaaattctttACGTTCAattctgaaatctttttt taggAAACATTTtcccaataaaatttttttactaATGTTTGATTCTTCAT AAATATTCCAGGTGGCCCTAAAAGTTGAAAAAccgagaaaaagtgaaaat tgaaaatttcgactTCACTTCATAATAATAGGGCCCTGGTATACTGCCTA AGGAGGTGGTACCATGGTTGGTCCAGACGGGCTAGAATTTTAGTCCTTCT AGAACGCCTAAAAAAGGTCTGTTTTAAGGTTATTAAACGAAATTTGGCCT CATTAGTATATTTTGTTTAATTGCTCTGCAAAAATGTGGTCGGGTCACTC CAGTTAAGAATGTCTGGAACTCTTATATTTTCCTATTTTCGGTTTTTAGC TCGGACATACCCTTATCTCGATAACCGAGTAACCTCTCCCGGGGTATAAG GGACTGTGGATTCCAGTTTTGACAAAGCTAGAGTAGATTAGTTTTTCTGG ATAACAGCGTAATGTAAACCCTTTGTTTATGATCATTTACCTCGCCCTTT CACCTTTGctaaaaaaatactcaaaaaagccttgaaaaaaTGGTCTGTAA AAAATGAATCAAAGCAAATTCGAAGAAAGATAAcggtttttccaaatttc caaaaaaatactttttcaaaatttgatgacgtcaacaaaaatcagaaatt ctaatttttactaaaaaaaatgctgacgtcgaaaattcgaaaaattgctT TTGTAAAACATTACTTGCCTACCAAattagatcaaaatttgagaagtTAT gagcatttcaaatttttcttaaaattttcagaaatatcTGAAAGAGAATG GCCTATTATTTTTAGAAAGATATTTAAACCTTTTCCGATGCAGGATAAGG TATGGGGGAGGGCGAGACAATCTTGTAAATGTGTTGTATTTCATGCTTTA Acagggaaaaatgaaaaactttgaacaaaaagtaaagaaattgcccaaaa ctaagaaaaaaaatgactttttgagATTTCGATCGTTATTCGATCATATt tggcgagaccaatttaatttgttgttctacgNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN Ncttgaataaagctgaaaattaattcaagaaattgaaaaatcataaaaag cattccatacactaaaattttattatgatcttcatcgaagataaaaaaaa aagttaatttttgatccagatactttttgggaaaattttctcggtacctt accaaccctgataaatgaaaaaaaaattcttattttgccgaccgaccgac ccatatttttctaacgatctgtccgtagaacaacaaattaaattggtctc gccttggTAACCAGAAAAAACCGCCTCATAATTTACATTAGCATGACAGC TATATTTTGAGGCTGTAAGAAGCTATAACTAGCCCAGAATACTGTATTAT AACGTCATTAACATTACGTTATAAAGCTTAAAATTTGCATTGAACTGAAA AACTAATTGTGATATCAAAGTTCACTtataatgatgacgtcagcattttt aaacaattttcgttTTCTGGTTAAAAAAGACGTTAGCTTTTTTTCAGCAG GCGCCGCGGCAGCGGGAGGGGGCCGGTCGGGCCTTGAcccgaccacattt tttcaaagcaaaaagaaaatttactcaTCAAGCCAAATTCTGTTTAATAA CCTTAAATCAGAACTGTTTTAGGCGGAATCTGGAAGggctaaaatctaaa aattttcacccgtcggccccaactatggtggcgcctccttgtCAGTATAT CGTGGCCCTATCACTTTCGAAGTGGAGCCGCGGTCCGGCAGTTCAGGCAC CTAAAAGAAAGTAGAAACTATAGGCTAATTAACGACTGTGAACAAGCTTC CAATTCCTAAAACCGAAGATATTCTCATTTTTCGAGggcaaaaatgctga aaaaatggaatcttgatttttttaactcCCTCTGCTTAATATGGAGAACC AAAACTGGttactttattttgaaaaagtgagtaACAACTTGTCGCCAAGT GTTCTTTGATACATTATTTTTTGCACTGGCTAAACATAATTCGAGTGTTA TCTTATGTGCTATCTGAAAATGGGACATCTCAAGGCTATGAATCGCCCCA AAGCCCATTGGATATTGTCCACCCAACACTACTTATGATAAAGGTAACCA TTGAGATCACACAACTCTCGCATAATACAAACTACCTGTATTTTAGAATG GTAAAATCAAATTTCCCTATTacgaaatcatttttaaaacaaatagCAAC AAAACTTCCCACTCATAAAGCTAAAATCTTCCTGTCTCAGAATTAACATT TTTAACATTATTCAGACTCTTACCTATCTCAAGTTACAGTCGTCACATAG TGAGAGAGAAATCATAGAAGTGTTGGGCAATATTTATGCATACGTCAGCT ATATTGTTTCAAATTGTCTCTAATTGCCTCCAAAAAGTGCTGTGATGATA AAAACAACAACTTCCCGAGGAGGCGGGGGATTATTTTAGTCATTATTCAT CCAGCTTCGTGTGCACAATTCCCTGAATTGCAAAATCTTCCTAACATGTC ATTACCATGTGatttattagaattttttttttgtgcagtacagtattttt tttaaagttaaaatattGTAGAAAGTGTCAAgtcattattttttcataaa ttacgtgtCAAACACTTTTTGCCTCATTTTGAAACGATTTCTTTTTACAT AATTATCTCTCTTATCTTTaaattttaggggatttttcaGGCTTGAAAAA CTAGCTGTCAGTGTCTTGAAATTACTCCAATATAAGGCACGTCTCGTTCA TAACATGTAAAGTTACAATTCATTGTCGATTGAAAGTATACGAGTATACT CCGAGGCTCCTCTTCGATAGCTAACTACCTGTCACCCGGTAGGGGAGGAC AACAACAATTTCTCTCTGGATTACGCTACTTACCTTGGGTCCTTCCCTTT AATCTCCGATTGTCAAGTTGAGAGGCCTCAAATACCAATTTTGTACTAAG TACCAAGCCTTTTAGGGTGATTAGGTCGGGGATTGAGCCGACGAACTTGT GCAGCGATCCAAAAGATGACATTTATATATCTTCCGATGATCGTCAGAGG CAGAGAAATAAAAGGGCCCGAAAATTGTTGCAAGGTAAAGTTTTTGACCT TGAAAAGTCACGAGAGCTTAATCTTTGAAACAGACCGTACATTACACGAG CGAAGATCTAGTCAGCACAAGGTCGCACTTGTGAGTTACTTTCAAAACTG TTTCAGTTTCCTTCCCTTCCCCAGTGTATTGAACGAGAGCGTCTTGAACG AACCAAATTCTACATTTTTCAGACTTGTTATCTCACGTTTGTAGATTGCT ATGGCAACCAAATTAAAATGTCGAGATTTTACTTTTTGAACTATACATCC GAGATCAGGTTACAAAGTTTGATATCAATTCTAGATAAGATAGTTGAGGT GatattttagtttttaacaaCAATATGACTATTATGATGATTGGGTTTTG ATCTGGTCCGTCTTAtacctaaattttatttttcttgatcaTCAATATGA TCCTATAAAAACATTGATAAAAAGGCTGTAAGCTTAAACGCTCTGTTAAA AGAGGAAATCATATCCTTGCCAACATTTCATCAAGATTTCCCCGAAAAGG CGACCTTCTAAGAAAATAACttatttttgttgaaatctgcaaaattttac TGAGCTCAATAGTTGAGAGTTTCCGATACATAGTAGGTCAGAACACGAAC TAGAAACGTAAAAATAAACGTCATGACGGATGACGTGATTTTGGGGCACA AAAAGGGTACAAAACCTTCAAAAATAACATATACTTGCTAAAATGTTTCA CAAAGGTTGCACGATGCATGATATAGTAAgcattttttaaagtaaatttt atagcCTTTTTCTCTAGTATTAGATTTAATCAAAACTATCTCTTACTAAA GACTATGACGTCAGTGTACGTAGTAGGTATTAATGCCGATTTGCtatttt cattcatttgttAGCAAATGCTGATTCGGCAAATAATTGCATTGAGCGTG CCACTCTCTAAAAAGAAGGCTTTTTATCTACCAATCATAAGTTAAAACCC GTGAGAATTGGGAAATACCGCCGGCTTTAAGCAAGGCTATTACTTTAACA AAACATCTTCAAGCAATATTTCGCAATATTGACATGTTTGACAGGCATGT TTGAGAGAGAGAGGTTTTTTACGTGGCCGAAAGTAAAATGATTATTGATG CGTAGCAGTCCGATACAACATTATGAAGTAAGAGGACAACCCGGAGCAAA ACGGAGAAAAGTGCTTATCTGTTAATTGTTGAAACGGGTAATTGTATTAA AAGATTCTCAGACCCGGTGTACATTTTCTAAGCATTGAAACAATGGGAAA GTACCGTATGATTGCTATTAATAAGATGGGGCAGATGGCAATTAGGGCAA GACCAAACTGTAGACTTGTAATTAACGAAGGTTAAAAGAAAGCAAGAAGC AAAgttcaaaaaaaatgaattatcttactatttttttgttttctcttgta GTTGTCGATGGGTTGAGCATTGTCCGGTCAGGATCTAAAGATACAAAAGG TAACTCAAACGGTTGTGAATTATACAGGGCTTCCAATTCTTATTAGCTAT TCAATGATCACATTgcaacatttgttttgatttggaatTAACATAAGTTA CTGGTCCTCTCTCTTTTTAAAATAAACAgtatatcatattttcaagacaa GACTTGTCAAAATAAATAAGAGTGTATTAAGAGTGTTGCTGATCCGTTGT TTAAGAAAGGTTTGTATAAATTAAAAACGGTTGCTGAAAATGTAAAATTG TTGTGCATGGATAGTAGGTAATAATATTTTCATTATGTATTTTTAGATCT GACTGCATTGTTGAAAGTCCAGCGTGACAGGGACAACGTCACTTGTCAAA ATTTGTACAAGGTCTACTGGCTAGTCAAGAAAGATCAGTTCAGTGTTGCA TCACCCAAACAAAACATTAACTACGTCATTCAAGCCTGCAAACCAGATAT CACAAACTTATTCTGCGCGGATGAAAGTAACGATCAAATTTGGACAGCTG TCcgattttgtgacgtcattccGAATTCTGACTTCATTGTGTGTAAAATT TTTCCGAAAGGATTCGAATCGTACAACCATTTCGCGAATTGGACGATGGA ATCTTTTATCTACAAAGTTCGCGGAGAGGATGCTGGGAAATCTGTACAAA TGAATACAAAAAGTTTGGTCATCACACCTTTCTACAGATGTCCGAGAATC AAACTTGTCCGGCCAAGCCATCAATTATTCAACTAAAAGCGAACAGAATC TTACAGACGATCAAAGGAGACTCCTGATCCTCAAAATTctttaaaagaat aaattttAATCCCATATCGCAATTTTTTTCCACAGTCAAAACAAGATTGG GAGTTTTCCATTATTGAAGGTCTGTAAGACGCATGAACTGGACCCGACTT AATGAATATGAAACAACCAAAAGATTCTTGACGATAAATCAAGAGcaaca ttttattttatattcgTATCATTACACTTAGTTTTTTAATCCTGCTAAGA GACCAACTTCATTGTATCCCAAAAAAAAGGGCAAATTTTAAATGAAGTAA AATCCGCATAGTTTATGTAGaattttatgacttgtataactgatattggg ctcttccagaaaaaatccgttcatggggggtggaggatgaattgtccagg ggtatttaaaaaataccaaaaaaatgcaatgtccagggggtaattttttg tgtccacggggttgatttgatgtttgtccaggggtataacccgtgtccaa ggggttaaaaatcaaaatatccaggggtaattcatgaaaaaaataatata tcctccaccccccatgaacggattttttctggaagagcccatttcaaGCT CAAAAACATTCAATCATTTTGGGACTATCTATTGATTAAACAGAGTAttg ttattttatttcaatcattCTAAGCCAAGTTCTCAGATAACgagttttga agattttacttTATGTAAAAGtttgtccgctttttttgggacacactgta tctAACATCGTAGGCAGGAAAATGCTTAAGACCACTTATAACGAATTCTT TCTCAAAGTTTTCTCAAAGACAATTTAAATCAGCCTTGGATTGAGACAAT CATGCATATCTTTTTTGCATTGCCTTTTCATAAGTTTATAGCTTTGAGGT ATTTTATTGGGCTATTTcaattaaatattttatttgctGTTATATAACCT TAATatatatttcattatttttaaacCGTATGTCAAcccaaaatttttat aattattcTTTACTTTAAGCACATGTATTTACTCATTTCAATAAATTATA ACCGACTTTGCAATTTCA

Coding sequence (CDS) from alignment at scaffold_247:242151..249568+

>TCONS_00054949 ID=TCONS_00054949|Name=TCONS_00054949|organism=Clytia hemisphaerica|type=CDS|length=2070bp|location=Sequence derived from alignment at scaffold_247:242151..249568+ (Clytia hemisphaerica)
GCGATTTCTGTTCCATCATGCCGATCTGTGCAAGGTATAAAATCAGTGAA
GTTTACACAAAATCATTTGAATAGCAATCAAACTTGGTCAGGTGGAAGCA
CACTCAAATATAACAGCAGAAGTTGGAAAATAACTTTGGTTGAGGGATCC
GAGATGTCAAATTATTGCTTTCTCCTGATTTTGATGGTATTTTCTTTCCA
AGTTGTCGATGGGTTGAGCATTGTCCGGTCAGGATCTAAAGATACAAAAG
ATCTGACTGCATTGTTGAAAGTCCAGCGTGACAGGGACAACGTCACTTGT
CAAAATTTGTACAAGGTCTACTGGCTAGTCAAGAAAGATCAGTTCAGTGT
TGCATCACCCAAACAAAACATTAACTACGTCATTCAAGCCTGCAAACCAG
ATATCACAAACTTATTCTGCGCGGATGAAAGTAACGATCAAATTTGGACA
GCTGTCcgattttgtgacgtcattccGAATTCTGACTTCATTGTGTGTAA
AATTTTTCCGAAAGGATTCGAATCGTACAACCATTTCGCGAATTGGACGA
TGGAATCTTTTATCTACAAAGTTCGCGGAGAGGATGCTGGGAAATCTGTA
CAAATGAATACAAAAAGTTTGGTCATCACACCTTTCTACAGATGTCCGAG
AATCAAACTTGTCCGGCCAAGCCATCAATTATTCAACTAAGCGATTTCTG
TTCCATCATGCCGATCTGTGCAAGGTATAAAATCAGTGAAGTTTACACAA
AATCATTTGAATAGCAATCAAACTTGGTCAGGTGGAAGCACACTCAAATA
TAACAGCAGAAGTTGGAAAATAACTTTGGTTGAGGGATCCGAGATGTCAA
ATTATTGCTTTCTCCTGATTTTGATGGTATTTTCTTTCCAAGTTGTCGAT
GGGTTGAGCATTGTCCGGTCAGGATCTAAAGATACAAAAGATCTGACTGC
ATTGTTGAAAGTCCAGCGTGACAGGGACAACGTCACTTGTCAAAATTTGT
ACAAGGTCTACTGGCTAGTCAAGAAAGATCAGTTCAGTGTTGCATCACCC
AAACAAAACATTAACTACGTCATTCAAGCCTGCAAACCAGATATCACAAA
CTTATTCTGCGCGGATGAAAGTAACGATCAAATTTGGACAGCTGTCcgat
tttgtgacgtcattccGAATTCTGACTTCATTGTGTGTAAAATTTTTCCG
AAAGGATTCGAATCGTACAACCATTTCGCGAATTGGACGATGGAATCTTT
TATCTACAAAGTTCGCGGAGAGGATGCTGGGAAATCTGTACAAATGAATA
CAAAAAGTTTGGTCATCACACCTTTCTACAGATGTCCGAGAATCAAACTT
GTCCGGCCAAGCCATCAATTATTCAACTAAGCGATTTCTGTTCCATCATG
CCGATCTGTGCAAGGTATAAAATCAGTGAAGTTTACACAAAATCATTTGA
ATAGCAATCAAACTTGGTCAGGTGGAAGCACACTCAAATATAACAGCAGA
AGTTGGAAAATAACTTTGGTTGAGGGATCCGAGATGTCAAATTATTGCTT
TCTCCTGATTTTGATGGTATTTTCTTTCCAAGTTGTCGATGGGTTGAGCA
TTGTCCGGTCAGGATCTAAAGATACAAAAGATCTGACTGCATTGTTGAAA
GTCCAGCGTGACAGGGACAACGTCACTTGTCAAAATTTGTACAAGGTCTA
CTGGCTAGTCAAGAAAGATCAGTTCAGTGTTGCATCACCCAAACAAAACA
TTAACTACGTCATTCAAGCCTGCAAACCAGATATCACAAACTTATTCTGC
GCGGATGAAAGTAACGATCAAATTTGGACAGCTGTCcgattttgtgacgt
cattccGAATTCTGACTTCATTGTGTGTAAAATTTTTCCGAAAGGATTCG
AATCGTACAACCATTTCGCGAATTGGACGATGGAATCTTTTATCTACAAA
GTTCGCGGAGAGGATGCTGGGAAATCTGTACAAATGAATACAAAAAGTTT
GGTCATCACACCTTTCTACAGATGTCCGAGAATCAAACTTGTCCGGCCAA
GCCATCAATTATTCAACTAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034629XLOC_034629Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054949-proteinTCONS_00054949-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054949-exon-scaffold_247-1491911889:242151..242354TCONS_00054949-exon-scaffold_247-1491911889:242151..242354Clytia hemisphaericaexon
TCONS_00054949-exon-scaffold_247-1510915933:242151..242354TCONS_00054949-exon-scaffold_247-1510915933:242151..242354Clytia hemisphaericaexon
TCONS_00054949-exon-scaffold_247-1575043694:242151..242354TCONS_00054949-exon-scaffold_247-1575043694:242151..242354Clytia hemisphaericaexon
TCONS_00054949-exon-scaffold_247-1491911889:247702..247749TCONS_00054949-exon-scaffold_247-1491911889:247702..247749Clytia hemisphaericaexon
TCONS_00054949-exon-scaffold_247-1510915933:247702..247749TCONS_00054949-exon-scaffold_247-1510915933:247702..247749Clytia hemisphaericaexon
TCONS_00054949-exon-scaffold_247-1575043694:247702..247749TCONS_00054949-exon-scaffold_247-1575043694:247702..247749Clytia hemisphaericaexon
TCONS_00054949-exon-scaffold_247-1491911889:248047..249568TCONS_00054949-exon-scaffold_247-1491911889:248047..249568Clytia hemisphaericaexon
TCONS_00054949-exon-scaffold_247-1510915933:248047..249568TCONS_00054949-exon-scaffold_247-1510915933:248047..249568Clytia hemisphaericaexon
TCONS_00054949-exon-scaffold_247-1575043694:248047..249568TCONS_00054949-exon-scaffold_247-1575043694:248047..249568Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_247supercontigscaffold_247:242151..249568 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 1.19609 1.58813 19.8089 22.15 17.3239 20.1509 9.80197 4.56336 0 0.792663 0 0 0 0 0 0 0 0.313711 0 0 0.238068 0.808904 0.916292 0 0.452278 0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00054949 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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