|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00054975 ID=TCONS_00054975|Name=TCONS_00054975|organism=Clytia hemisphaerica|type=transcript|length=1778bp
ATCTGCGCACTTTTGATAAAGTACAGAATAGAGTTTGATCAAATGGTTAA
GTTGTGGTATCTTGTTCTGTAATTTAAATCATAAGAATTTTATCGAAAAG
CccagagaaaatcaaaacagggGCAAAAAGCCTGGAAGACGACACCAAAA
AGTGGAAGAGATGACAGGAAAGAAacgttatttttgaaaacataatTTGA
GTATTCAATAATGTTTTCTTAGCTATGGCAGCAAGTCAAATTCTTGGTCA
ATTCTTTGTTACGGGGGACGTAAGCCAAGCAGCATTGGTGGCATCCATAT
GTTTTTCAAATCGTTCTGACAgtgatgaaaaaattattagaaACATTGTG
AAAAATGGTTGGGATGAAGAAGAACAGGTTATATCTAATTTGTTGCAATC
ACCTTTCCTCTTACCAGAAGATATAAGACTTTCTACAATCATAAAAGGAT
TGGAAGATGATGAAATGCCCTATTTTATTCTCTCCGCTTGTATCGGAATT
CAAAGAGTAAAACTGAAAGATGATGATCTTGAAAGTCTAGAGAAACTTTT
ACGAAAAGCTGTTTTCAATGAGCATGGTGCAGTTTGTATGAGAGCTTTTA
TCACATTGAATCCATTTTTGAAATATCCGAAAGACAATCAGTTGTTTATT
GATATTTTGAGCACAAAAAAATCTCCTTTACATGAGACGGCATTATCATG
GCTTGTATTGCATGTCAGTGATAAACAAGAACTTTTGAAATTATTGAATG
ATGGCCATGTGAAAGATTCATTGGTAACTGATGCAGTAAAGAAGATTGAC
GACCACTGCCAAAGTCTGGCTCATGGTGAAGAATCTCCAGTCACCATTGA
AGTATTCGACTATGTTCCAAATATGATCGACTTTGAAGCAATGTTAGATA
AAGAAGATGCATTGACAGAATTTTTCGACGACCTGGACACAGATCATGAT
GAGAAACTTTCGGCAAAAGAAGTTCAAACTTTCCTTGAAGATATTGGAAA
AGAAgttaaaattgatgacgtcatagaagAGATGAAGAAAATTGGAATTG
ATGATGGAGGGAAGATCGATCGAGATGGATTCATGGAAATGATGTTTCCC
AAATTTCAAATCCATTGATAAAATGAATTGTGCTCTAGTTTGACTGGTTA
ATCCCCTTGTTGCAAAGTATGTTATGAAAAAAGCCTTTATCCCATTAATG
CTGCTGACTATCGTAAAATTGCAAGTCTCTTTGTATATTAATAGTTTGCT
CGATTGTTCATTGTGAGAGGATGGAGATTGTCAAAATGAGCAAGGAAAAT
AAtagttttgaatattttacttGATACAAACCCAATTACGCAACTACGca
gagtttaaaaaaaattcattcaaattaaaaagaatatttttagagaGAAA
TTATTATGCATAGAGACTTTATTGATTTCATAGAGATTTTATTCGTGTGT
GTTTGTTATCATGTGTTGATCTTTCAAATCAAATATTAGACTAATTAGAC
CCAATCATTATAAAAATGGTTATcatataaattaaaattttcaaaattca
cccTAATTAATGTGCCTTTGATTGTTAGCCCTGGTTAGATTAATAAATAA
GAAACtgcctttttgaaaaatattttaaatctgctcttcttttttatctt
ttactTTCGTATCGTCTATCGGGTTAGCTCTTATGAATTGCATTATTCTA
ACATCCAAACTTGATTTAAATTTTGCATGCTAGTGTGAATCATAAACCTT
AAAAAATAGATCCTTCATATCGtttggc Run BLAST on NCBI protein sequence of TCONS_00054975-protein >TCONS_00054975-protein ID=TCONS_00054975-protein|Name=TCONS_00054975-protein|organism=Clytia hemisphaerica|type=polypeptide|length=297bp
MAASQILGQFFVTGDVSQAALVASICFSNRSDSDEKIIRNIVKNGWDEEE
QVISNLLQSPFLLPEDIRLSTIIKGLEDDEMPYFILSACIGIQRVKLKDD
DLESLEKLLRKAVFNEHGAVCMRAFITLNPFLKYPKDNQLFIDILSTKKS
PLHETALSWLVLHVSDKQELLKLLNDGHVKDSLVTDAVKKIDDHCQSLAH
GEESPVTIEVFDYVPNMIDFEAMLDKEDALTEFFDDLDTDHDEKLSAKEV
QTFLEDIGKEVKIDDVIEEMKKIGIDDGGKIDRDGFMEMMFPKFQIH Run BLAST on NCBI transcript from alignment at scaffold_247:255735..269417- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00054975 ID=TCONS_00054975|Name=TCONS_00054975|organism=Clytia hemisphaerica|type=transcript|length=13683bp|location=Sequence derived from alignment at scaffold_247:255735..269417- (Clytia hemisphaerica)
ATCTGCGCACTTTTGATAAAGTACAGAATAGAGTTTGATCAAATGGTTAA
GTTGTGGTATCTTGTTCTGTAATTTAAATCATAAGAATTTTATCGAAAAG
CCCAGAGAAAATCAAAACAGGGGCAAAAAGCCTGGAAGACGACACCAAAA
AGTGGAAGAGATGACAGGAAAGAAACGTTATTTTTGAAAACATAATTTGA
GTATTCAATAATGTTTTCTTAGCTATGGCAGCAAGTCAAATTCTTGGTAA
GTAATATTTAGTTTGTTTATTATAAAAGGGGCCTCATGTGTTAGTACTCC
ACATAAATTTTTAAATAAAGGGAAAGTGGGTTTTCAGCTTCTAACTTTTG
ATAGCAATCTTTTTTTGGCAAAAAAATTTCAGGGTGGTGTAAATATCATA
TAGAAAAGCATACTAAAATTTGAGGGGATTTTGATTGACAAAACTTAAGA
AAAGCTCAAAAAACCAACTTCCCCTAAGGAAACACAGGCAAAAACAGGTT
TGCTCCACTTTAATAATAACGCTATATTTTGGTAGAAATTCTGATGAGTA
TTGTTACAAATTAGCCAAATGGTTGCCCTTCTTCGGCTATTTCCACTTAT
TTTAAGAAAGATTTAAAAACTTATAACTCATTTCAAACTTGAGATTTTGT
AATTTCAAGATTTTGTTGACTTGACATCAGCGAACTCAAAATGCCCCAAA
TTGGGCCAGTCCAGAAAATTTTTGTTCAAAGGATTTANCCAAACAGCCTA
GACTAATGTTAATTTTTTTTTCAGAAAAAAGACTATAATTTGTTTACCTT
TATTCCTGCAGCTTCCCAACATCCAAGCTCTCAAACATCACAAGCCGAAT
GAAATTACTTTCGATTTCCCGTAGAAATTATGCGATGAAAATCCGGGGGT
CGAAGAATGAAGACTTTTTATTTCCGAACAAGTTATCTTCTTTGCTTATA
ACGAAATATTACTTTTCAATATATTTGCTAAATATAATGTTTGAAAACAA
AAATACTTTACACTGAAAAAAAGTCGATTCTACTATTCTACTTAGCTCTT
TGTTTTCATGTCCAACCCCCGTCTCAAAAGAAGCCCCAGAATCCCGAGAT
TTTTGCAGTCGGGCGTTCAAAACAAAGGCGTTTTTATTTTTCCGCCCACT
TACGAATTTTTCTTTATAATAGGCATTTAAAATATCAAATTTAAAAACAA
TAGTATAAAACCTTATTTTCTACCGTATAGTATTTCTTCTAAAACGAAAA
AACAAAATACACTAGAAAAATATAGAATTTACGAGTGTTATCAAGCCACC
CAAAATGAACTTTCATTCGTCCGCGTCATCGAATTGTTGTATACGTCACG
ATCAATTGTCAACCATTGTCCAATCCCGTNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCGAGGACA
ACACGCGGTCTTAACTTTTTTCCCTCGTAAGTTTGGGGGGAAAACGAAAG
TACTCTATATTTTACGTATGGGGAAGTGTAAGAAAGATTTGCAAAATAGA
AAAGTTTCGTTTTGGGGTGAAGAATCAGTATTGTGAATTTAAGCGAGTTT
CTATTTTGCAATTTTTCTACAGAGCCAAATAAAGATTTTTTCTATTGTTC
TTGCTCGATTGCCTCTAACGATAAGTTCCGTAGTTATGAGGTTATCGAGA
CAAAATGTGAAGAATTTGCGCGGAAACGAAATTTAACATTAGTCTAGGCT
GCCAAAATGCCCCAAATTGGGCCAGTCCAGAAAATTTTTTTTTTAATAAG
GAACACCTTTATAAGGAACTTGAGGCTGAAAATGGTCCAAAAAATAAGGA
ATTATTAAGGAACTGCTCAGGCTGAGAAGAAGTTATACTTATATAGAAGT
TAAATATTTTGCGAATCCAAACTTAGCAGCTATGTAAATAAGGAACTCGA
TAAGGAACTTAATGCCGTTCAGAAAATGCAGATACATCTGTGACTTTAGA
GGATGGATAAAAGATATAGCATCTTAAAGGTCAACCAGTATTTTGGGGCC
CTACAGTAGAATCAGCATTGATAAAACCGAAAATCCTAAATATGAGAAAC
AGCAAAAAATCTTGGAATTCCATTCCTATCAGCATGAGTTAATAGCTTAT
AACAAAAAATTAACATTATATATAAAAAATTTCGCTGAATCAGCAAAAAA
CGGCAAATTCTGTCATTTTATTGCAAAATATAGGAGAAAAATACCTTTAT
TAAAGCTTAATATTTTCAGTTTCAGTTTTAAGCTTTTTTTCTAAAATTTT
CACAGCTTATTCCGTACATAAATGGAACTATTTTCAAAAGAGATTGGTTT
ATAGAAACTTGATAAAGACGTTGTTAAAACAAAATTGTCATTTTGAAAAT
TTCTAAATTTTCAGTTTGGACTTTGCAATATTGAAAATCTTGAAATATTT
TATAAAAATCATAAATTTTACATCCATCAGGTTGGTAAATTTAAACGAAA
ACACAAATATGTTCATAGTTTTCCCCCCTATTACCACTGGGCTTATTAAT
TTGATTTTAACTACATCTACGTTTTGGGAGCCCCAAACCTGCGTTTTGAC
AACCAGGGGTATACTGTAAAAATTTTATCAAACAAATTTATGATCAAAAC
CCTCCAAATCACATTTCTAAATTATGGTCAAAAATTTTGTATTCATATCT
TAAAGATATCTCGAGAAATCGCTAAGATAGCAAACCTCCGTTTTGGGGGC
CAATAGAAAAAAGCTACATATCTTTAAGCGATCTAAAAATATTTTTTTAA
ATGGAAAATTTTGAAAAATAACTTCCAGGAAATAAAGTAGAGATGTTAAA
GTTTTTCATGCAGCAAAAATTTTTGTAAAACCTCTTTTTCTCTAGATTTG
AGAGAAATTTCAAATTTGATCGGCGTTTTTCGAATGTTCAACATTTTAAA
AGACAAAAGAATGCAGAAGCGATGGGTTGGGGGGGGGGGTGAAAACAAAA
CAAAAAATGGATAGAATTAGAAAGACTTTTTTGGGTCGTCAATGAATTAG
AATTATCAAATGACTTCTTGTGCACTACCAAATATATTAGTCGTCCAAAA
AATCTCAGAACTCTTAAAATAATTGTCGTTTTGCACTCGAAGTCATGCAT
GTAGTAAATATAAGGAGACGTGTAACTAACAATTTTTGTGTTGATAAAAC
CCCTGTTAATTTTTGAAGGTTCACTCTAAAGTTTAAACTTGATCATTCAT
GTTAATTTGATGTTGTGTTAATTTCAAGGCCGTTAATACTTCCATACTTA
TATTCTTGTTATAAGGTATACCTCTTCTAACCTCTCCATAAAATCTTTGA
TCAACTCCTTTTCAAGCTTGAGATATGGTATTTTCTTTCCTGTTTTGATG
ATGTCATCGGCCGATTTTCAGAGTCAACAGAGTCACAGCAAAGCAGGCCA
AAGTCTTATAACCCTTACCCTTGCCACTGTATTGAAATGAGGGGACAATG
ACCTGACAACTTCTTTTGAATCTCAAGATATCGCATTTTGAAGTTTTTCC
CTCCCAAATCTGTCACATTATTAGGTCTCTTACTCCCCCATTTATCCACC
ATAAGTTTGGAAATTTTGGACTTTTTACAGTTAATGAGTAGCCTAAGAAA
AAGGAGAGTGGGTTGTCAATTTTGCAAAAGATTAACACTCAGACTATTTT
TCATGCCCTTTTAGTGTCTGGTCATGTTCTTAAATTATGAAACAATTATT
TAGTAATTTAATTACGATAATAAACCAGCCGAGGCTGGAAGGTCAGCCAA
GAGAGCTAAGATGGTTAGAGGGTCAAAGGGGTTAGAGGGTCAAAGGGGTG
AAAGGGATAATTTTGATGAGATGCGAGCAAATGTTAGATCAGCGTTCGAT
ACAATTAGCTGCTGGTTGAAAAGTCCAGGAACCTTGCTCGTTTGGGATGT
TAGTTAGTCTACATAGTGTAATTAAACTTTTTGTTCATTTTAGTCAGTTT
AAAAATACATTTTTCAACCTACCTGGAGGTCCGTTCGTTCGATTTTCAAA
AAAAAATCATTTCCGGCCGAAAATGCCGGAAAAACCGGTTTTTTAGTATT
TTCTCGAGATTTCATCATTAGTTTTTTCAGATTTTTTGCACAAAGATGCG
TATTAGCAATGCCCAAAACATGGCAGAGTCCGATTTTTGAGAAAAAATCT
TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNGGGAACTTTCTAAAAATCGCAGGAACAGC
CGATTTTCGCCGGAAAAACGGTATTTCTTGAATTTCTCGAGCTGTACTTT
ATATTTTTTTAAGAAATTTTGCACACTGATGTAAAATGACAATATCTAAA
AAGTGACGGAGCCTGATTTTTGAAAAACATTTTTTTCCGGCCGAAAATGC
CGGAAATATGCCGGAAATCGCCGTTTTTCTGGATTTTCATTGGACTTTTT
CCCTATAATTGGTTGTTTTTTCATTCAAAAACATTATTAATTGCAATGCC
CACCATCAAGCATGTTTCAATTTTCAATAAGATTGATTTTTGAAGCCGGA
ACTATTTAAAAATCACCGGAACAACTTATTTTCGACGGAAAGACGGTATT
TCTTGAATTTCTCGAGCTGTACTTTATATATTTTTATGAAATCTTGCACA
CTGATGCAATATGACAATACCTAAAATAAGACGGAGCCCGATTTTCGAAA
AACATTTTTTCCGGCCGAAAATGCCGGAAATATGCCGGAAAAAACGGTTT
TTTACATTTTCTCGAATTTCACCTTTATTTTTTCAGATTTTTTTGCAGAA
AGATGCGTATTCGCAATGCTCAAAACATGGCTGAGTTCGATATTCGAGAA
ATTATTTTTTCCGGTTGAAAATGCCGGAAATCGCCGTTTTTGCAGATTTT
CATTAGATTTTTTTCCTTGTATTTCTATGTTTTTGACTCAAAAACATTAT
TGATAACAATGCTCACCATCAAGCTTGATTCAATTGTCAATAAAACTGAT
TTTTGCGACCAGAACTTTCTATTTATTTTTTCCCTACAACCCNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNTCTCCCCTTATCAACAATCAATGATGAATTTATTGCG
TTATGCATTTTCACTAAACGCTATATTTTCTGACTGATTTTTTTCTCCTC
GCATTGCTATCTAAATTTCATCATCAGGTAGGTCCATTCAGCATCTAGCT
TGTTTCTGTTGGGTGTAGACAATATCCATATCTGACCAAAGTGTTATACT
ACAAATAAATAAGAAAATTGCCAAAAAGTCAAACCCAAAATAAAGATACA
TGCCATAATTTTAGTGCAGAACCATTATTAGTTTTCATTACATAGAAACT
GTACTTTTTTTGTTTATATGATAAAACTCCAATAACACTTAATGTTGTAA
CTCTCTGCACAGCTTCTTCTAAAAATTGTAACTGACTGCCATTAAAGCTG
CAAACTTTTTGTTATGGCTGTGCAAGTTGTGACAAGAGTGGCCATGTTGT
GTAACTTGATGGTATATTATATACTTCATTAAAAAATCTAGAAACAACTT
TCCGCAGTCCGCTTTCTGCAAGTCCGATAAAAGATTTGTAAAAACTGTTG
TCACCATGCATTCCATATCAACCATTTAGTTAAAGCCAAAAACGTGCGCA
AAGATCAGAATAATCTGCTGTTCCAAACTGCGTGAAAAATAATTTGATCA
ATTTCAACAAAAACTGTATATATAATATCAATATAATTGATCAAATTCCA
AAGAACATTTGTCATAATTTTGAAAGTCCAATAATAGGAGATGTGATCGT
CATCTGACCGACCCTGACGGTCAGCAGGTAGAGTCTGTAAGTCTGAAAGC
TTTTCCGCTGCTTTGCTGGATTCCCACTGTCAACCTCTGCACGCGCTGTG
TTTACAAGTTTTCAAATCGAAGTAGCGAGCTGCGTGCTAATGGAGAGTAA
ACCGAAAACTAGTTTATCCACGGTTGACGGTTTCTCAATTTTTTAATTCG
GACCAGTCCACGCGGATTCCCTTTCAACAAGATGTAGCTGCTTCTTTAAC
AGAAAAATATTTTCGACCGACCGACCGACCGAACGACCCACCTTTTTAAA
GTAGAAATGATGGGAACCGAACAATTTTTTGCGACCCGCCTTATATAATA
TGACTGAAGCCACAACTTTACCGATACACAGGACATTCCGGTGCAGTTTG
TCAGGTGCACAAATATATGGATAAATCACTGGACAAAAGTCCGCTGTAGT
GTCTGGTGTACTTTGTTTCCAAGAGAAAAATGTGCCGTCAACTGCTCCAA
CTTGGGACTATCTTACGCAACATGGGACGGCCATTCAACCATACACAATT
TCTCTTTGGCACCAAATAGGCTTTTAAATCGAAATATAAAAAAAAGCTGT
AGTGGAACACGCGCGAATGTGATCTATTTGTTATAGACAGGCAGCTGAGG
TCACAAAAAAATTGGACGGGGTGCGAACAATCCCAAACCACTTTTAATTG
AAAATATACAACCTAAATATCTAGAAACCAGAAACGGGAATACTTATTAT
CTCATCGGGCGGTTAGGCGGTGGGCATTCTCTAATTCTCCATTCGGCATC
CGGTCATTTTAAATGAAAACAAAAGTTAAAAAGGGTGCTCTATCAGTGAA
AGTTATCGTGACATGTTATGACAGAAAGTATGATTGATAAACTTGGCGGA
ATTATCAAAACAAATTTGTTGTCAAAGAGATTTAACAGTAAGTGAAAATA
CAGGCCAGATATCAACAAGTCCCATGTTGCGTACACTCATCCCAAGTTGG
AGCTGTTGACGGTACTAGACAGTCTGGTGTAGTCCGGTGTACACTTTTGA
AAATTTAATGAAGAAAACACCAGACAAAAAATAACGCCGGAATGTCCGGT
GTATCGGCAGGGTCGTCTGAAGCCAAACACGTCCAAGTCCAAAAAAACAC
GATTGCATCCAGTCTTTATCAGATTTAGACAGTAGCTGTATGTACTTTTG
TATACTTTATCAAATTCCAATAACATTATAACACCATCAATCCCCCCCCC
TCTAGAGGCAAACAAGAAAAATATGTTTTTATTGCAAAAACTACTGTAAT
AAAAAGCAACAATAAAAAGTACCAGAAAATTCAACATAAACAAAAACTTG
AGCAAACGGATTTAAACCTTCATAAGATGTAGAAAAAGAATCCCCTTGAT
GAAAATCGTGTGTTTGATTTGCCAAGTTAAAAAAATAAATGACAGAAATT
GAAGCTTGCAACAGATTCACACTGGAAATACTTTGGAACAACACTTTATC
GACTTATCACTTGAGCCGCCATCTTGAAACACCACATTATGATCTGTAAA
AACAACACACGCTAAAAGTACCCAAAAAGTTAACCCGATTGGAAGAAGGT
TTAGAAATCAAAGTGAGATCGGGAAATCGGATTTTTTTTTTGCCGTCTTA
TGGAACTGGAAGAAAATTTTACCTATTTGAATGCTCAGCTCAGGTTAGCT
GACCAATAAAAAAAAAAGCAGTAAAAGTGCCATTTGGATGGATATCCATA
TAGAGGTTAACTAAACTAATCAATGAGATAACTACCTGGTTAAGAGCAAT
ATGTTTGCACTATTTAACAATAGGGGAATTAGCAAATAACAATGTAACAT
GGGAAATACAATTGGACAAACAATTAGGGTGGCGGTGGTATACAAAAAAT
TCTTGAAAATAAATGTATGTCTGAGATGGATATGACAGATATAATACTGA
CACCCTCATTCTTGGGAAGATTTGTCAATAACTAACCAACCAACCTTCAT
TTCAAGAAAAACTTTCTCCCCCAAAGATGCTTGTGAAGGGTTCAACAAGA
TGAGATTTTTTTATTTTTTTTCTCTTGTAGGTCAATTCTTTGTTACGGGG
GACGTAAGCCAAGCAGCATTGGTGGCATCCATATGTTTTTCAAATCGTTC
TGACAGTGATGAAAAAATTATTAGAAACATTGTGAAAAATGGTTGGGATG
AAGAAGAACAGGTTATATCTAATTTGTTGCAATCACCTTTCCTCTTACCA
GAAGATATAAGACTTTCTACAATCATAAAAGGATTGGAAGATGATGAAAT
GCCCTATTTTATTCTCTCCGCTTGTATCGGAATTCAAAGAGTAAAACTGA
AAGATGATGATCTTGAAAGTCTAGAGAAACTTTTACGAAAAGCTGTTTTC
AATGAGCATGGTGCAGTTTGTATGAGAGCTTTTATCACATTGAATCCATT
TTTGAAATATCCGAAAGACAATCAGTTGTTTATTGATATTTTGAGCACAA
AAAAATCTCCTTTACATGAGACGGCATTATCATGGCTTGTATTGCATGTC
AGTGATAAACAAGAACTTTTGAAATTATTGAATGATGGCCATGTGAAAGA
TTCATTGGTAACTGATGCAGTAAAGAAGATTGACGACCACTGCCAAAGTC
TGGCTCATGGTATGTTATACGATTTTTCATGCAATATATGGTTGCTGAAA
GCTGTTTAAATTTTTTTTCACAATCTGTCTTTTGACAAAATATGCAGTTT
GATGCCCATTTTTAGTCGTTCTGTCAAACTTCTCATTTAAAGAAATTGAT
TCAAAACTTTATAATGAGATTGTGTGCTCATTGCAAGTTTGTTGCGACTA
ATTACTTGTTAATCCAAACATTATGTGATAGCAATTACCTGTGTAATGGT
TCTTTAATTTCCTCTTCATCTCAAAATAGAAAATTATGGAATTGCATTAT
TCTATGAAAAACTGTTGATTGTTACACATTTACAATTTTTTTCAATTTAT
TTGAGATATTATCGTCGCTGGGAAATAAAAAAAAGCCTAGTGTCGATTTT
TTGAAAAAATATGTTTTTGATTTTTGATACTTTAAAAGTCATGATCTCTG
ATAGTCTTAATTTCAAGATAATTTTTTCATATCTCTACAAAAGGTAGAAT
TTTGGATTAAATAGCCTTATGTCTAAGCGTATGCCCAACCTTTTTTACAT
TATTGTTAAATTTTGTGCAAAATTTGGAATAAAAAAGACATAAAATTTCT
GCCTGTGATTACAACGAGGTCAAAGATAGCCTGGATATCCAGACCGTAAA
CTATTTCACCGTCTAGTTTTTTATAATCTTGTCTCTGGTTTACGGTCTGG
TCCAAGTAACTCGTCTGCAGGGATATCNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNTCAGTACGCGCCCAGTCACTGAGCAGAATTTTCGCGGGCTTTTCGATA
TTTCTCGATGCGCGCGCATAATTTATGGAAAAAGCTGACATGGCAAAAAA
GATAAACATAATGAAAATGAAAACACAGGTTCATTTCATTTCTAAACAAA
ATGGCTGATGGAAAGGAGCCTTTATGAATGTGGCTGACGTTTGGATATAG
TTTAAAGTAGTTTTGAAAGTTTATTGAGTTTGTAAAAGAGATTTTATGGT
AAGTAATTATGTGTGTCTGCCTGGTTTTCCAAAGTTTTGATAGTCTGTCA
ACAAGGGTTCACTCACAGGCAGTATCAAACAAACTGTATCAGACTTTTTT
AGTTGCACCAGATTCTAAAATTTTAGAAACTTTGTATGTTGAGGTAAGAG
TTTTTTTTCTGAAATTTTGAGTCTGGATACCCAGGCTAGGTCAAAGACCT
CGACTATTTTGATTAATAAAATCTTCATGATAAGATTTATCTTTTTACAG
CCAAAATCATTAGCATAACAAACAAAAGGTAAAGCTTTAAAAAAAATAAG
TTAACAAGCAACTTTAATCATTACAATACTTTACTTACAGCATTGGTATT
GAAATACTGCGATTGTAATTTTCTCAAAACAGCAAAAATGGACATAAGGC
TTTTTGGACCTACCTCCGGGTGCCCCGGTGGAGGTCCTATAAATTAACCC
ATGTCCGTTCGTCTGTTCGTTCGTCCGTTCGTCCGTCCGTCTGTTACCAG
CTTTTCTCAGGATTGGCTCATTAATTTTTTCTGATTTTTTGCACAATGAT
GCAAAATGGCAATGCCTAAAATGTGTCGGAGTCCGATTTTCGAAAAAAAA
TATATTTGGGCAAATTCGGGCCAAAAACTACCTAAAAATAGGGTTTTTTG
GACTTTGTGCAAAATCCTGTCATTACTTTTTTCTGATTTTTTGCACAATG
AGGCAAAATGGCAATGCCCAGACCGTGACGGAGCCCGATTTTTGAAAAAA
AATATATTTGGGCAAATTCGGGCCAAAAACTACCTAAAAATAGGGTTTTT
TGGACTTTGTGCAAAATCCTGTCATTACTTTTTTCTGATTTTTTGCACAA
TGAGGCAAAATGGCAATGCCCAGACCGTGACGGAGCCCGATTTTTGAAAA
AAAATATATTTGGGCAAATTCGGGCCAAAAACTACCTAAAAATAGGGTTT
TTTGGACTTTGTGCAAAATCCTGTCATTACTTTTTTCTGATTTTTTGCAC
AATGAGGCAAAATGGCAATGCCCAGACCGTGACGGAGCCCGATTTTTGAA
AAAAAATATATTTGGGCAAATTCGGGCCAAAAACTACCTAAAAATAGGGT
TTTTTGGACTTTGTGCAAAATCCTGTCATTACTTTTTTCTGATTTTTTGC
ACAATGATGCAAAATGGCAATGCCTAAAATGTGTCGGAGCCCGATTTTCG
AAAAAAAATATATTTGGGCAAATTTGGGCCAAAAACTACCTAAAAATAGG
GTTTTTTGGACTTTGTGTGAAATCCTGTCATTACTTTTTTCTGATTTTTT
GTACAAAGATGGAGGGCAAGATTCTCTAAATAATGGCTGAAGTGGTTTTT
CCCGGAAAATTCTTATTCGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNTTTCCCGGAAAATTCTTATTCGCCTTAAAAAACGGATTTTCGTAT
TTTGGGGGAAATTCCCTTTAACCAAATAAGAAAATATAGCTTTTAACAAT
GTTGACTGATTATTTTTTTCTGATTTTTTTGCACAATGATGCAAAATGGT
AATGACTAAAATGTTACGGAGCCAGATTTTCGAAAAAAAATATATTTGGG
TAAATTTGGGCCAAAAACTGCCTAAAATAGGGTTTTTTGGACTTTGTGCA
AAATCCTGTTATTACTTTTTTCTGATTTTTTGTACAAAGATGGAGGGCAA
GATTCTCTAAAGAATGACTGAAGTGGATTTTCCCGGGAAATTCTTATTCG
CCTTAAAAGACGGATTCTCGTATTTTGGGGAAATTCCCTTTAACCAAATA
AGAAAATATAGCTTTTCTCAATGTTGACTCATAATATTTTTCTGATTTTT
TGCACAATGATGCAAAATGGCAATTCCCAAAATGTGACGAAGCCAGATTT
TTAAGGAAAATTATTTTGGGCAAATTTGGGCAAAAAACAGCTTTAAAAGG
TTTTTTGGGCCTGAATGGTTCAAGTGATTTTCGTATTTGGGGAAATTCCT
TTTTACCATTTTACATTATTCAACANNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNATTTTTCCATTCTGAATTTTTGTACAATTATTGTCACTTT
TTTCTTATTTTCATCTGATGTTAATCATTAGGTAGGTCCATTCAGCATGT
TGCTTGTTTATTTTCCAGCGATATCGTTATTGTAGATATTATAAATCTTT
CTATGCTCCGGAGTAACACCTCCAAATGATTTGGCCATTAACTACTATTT
AAAGTCAAAATATAGCGATTTAGAATCTATAGTTTGCTCTCTGATAATCA
AAAAATGTGTGCAATTTGAATATCTTGAATCTGCAATCTTGGTTGTTTAG
CGCAGGTCCTTAGAAGGAATCTTGATACCAAAAACCATCTGATATCTCTT
TAAAATTGAGTGACTATTTTATGTTTGTAGGTGAAGAATCTCCAGTCACC
ATTGAAGTATTCGACTATGTTCCAAATATGATCGACTTTGAAGCAATGTT
AGATAAAGAAGATGCATTGACAGAATTTTTCGACGACCTGGACACAGATC
ATGATGAGAAACTTTCGGCAAAAGAAGTTCAAACTTTCCTTGAAGATATT
GGAAAAGAAGTTAAAATTGATGACGTCATAGAAGAGATGAAGAAAATTGG
AATTGATGATGGAGGGAAGATCGATCGAGATGGATTCATGGAAATGATGT
TTCCCAAATTTCAAATCCATTGATAAAATGAATTGTGCTCTAGTTTGACT
GGTTAATCCCCTTGTTGCAAAGTATGTTATGAAAAAAGCCTTTATCCCAT
TAATGCTGCTGACTATCGTAAAATTGCAAGTCTCTTTGTATATTAATAGT
TTGCTCGATTGTTCATTGTGAGAGGATGGAGATTGTCAAAATGAGCAAGG
AAAATAATAGTTTTGAATATTTTACTTGATACAAACCCAATTACGCAACT
ACGCAGAGTTTAAAAAAAATTCATTCAAATTAAAAAGAATATTTTTAGAG
AGAAATTATTATGCATAGAGACTTTATTGATTTCATAGAGATTTTATTCG
TGTGTGTTTGTTATCATGTGTTGATCTTTCAAATCAAATATTAGACTAAT
TAGACCCAATCATTATAAAAATGGTTATCATATAAATTAAAATTTTCAAA
ATTCACCCTAATTAATGTGCCTTTGATTGTTAGCCCTGGTTAGATTAATA
AATAAGAAACTGCCTTTTTGAAAAATATTTTAAATCTGCTCTTCTTTTTT
ATCTTTTACTTTCGTATCGTCTATCGGGTTAGCTCTTATGAATTGCATTA
TTCTAACATCCAAACTTGATTTAAATTTTGCATGCTAGTGTGAATCATAA
ACCTTAAAAAATAGATCCTTCATATCGTTTGGC Coding sequence (CDS) from alignment at scaffold_247:255735..269417- >TCONS_00054975 ID=TCONS_00054975|Name=TCONS_00054975|organism=Clytia hemisphaerica|type=CDS|length=2682bp|location=Sequence derived from alignment at scaffold_247:255735..269417- (Clytia hemisphaerica)
GTGAAGAATCTCCAGTCACCATTGAAGTATTCGACTATGTTCCAAATATG
ATCGACTTTGAAGCAATGTTAGATAAAGAAGATGCATTGACAGAATTTTT
CGACGACCTGGACACAGATCATGATGAGAAACTTTCGGCAAAAGAAGTTC
AAACTTTCCTTGAAGATATTGGAAAAGAAGTTAAAATTGATGACGTCATA
GAAGAGATGAAGAAAATTGGAATTGATGATGGAGGGAAGATCGATCGAGA
TGGATTCATGGAAATGATGTTTCCCAAATTTCAAATCCATTGAGTCAATT
CTTTGTTACGGGGGACGTAAGCCAAGCAGCATTGGTGGCATCCATATGTT
TTTCAAATCGTTCTGACAGTGATGAAAAAATTATTAGAAACATTGTGAAA
AATGGTTGGGATGAAGAAGAACAGGTTATATCTAATTTGTTGCAATCACC
TTTCCTCTTACCAGAAGATATAAGACTTTCTACAATCATAAAAGGATTGG
AAGATGATGAAATGCCCTATTTTATTCTCTCCGCTTGTATCGGAATTCAA
AGAGTAAAACTGAAAGATGATGATCTTGAAAGTCTAGAGAAACTTTTACG
AAAAGCTGTTTTCAATGAGCATGGTGCAGTTTGTATGAGAGCTTTTATCA
CATTGAATCCATTTTTGAAATATCCGAAAGACAATCAGTTGTTTATTGAT
ATTTTGAGCACAAAAAAATCTCCTTTACATGAGACGGCATTATCATGGCT
TGTATTGCATGTCAGTGATAAACAAGAACTTTTGAAATTATTGAATGATG
GCCATGTGAAAGATTCATTGGTAACTGATGCAGTAAAGAAGATTGACGAC
CACTGCCAAAGTCTGGCTCATGATGGCAGCAAGTCAAATTCTTGGTGAAG
AATCTCCAGTCACCATTGAAGTATTCGACTATGTTCCAAATATGATCGAC
TTTGAAGCAATGTTAGATAAAGAAGATGCATTGACAGAATTTTTCGACGA
CCTGGACACAGATCATGATGAGAAACTTTCGGCAAAAGAAGTTCAAACTT
TCCTTGAAGATATTGGAAAAGAAGTTAAAATTGATGACGTCATAGAAGAG
ATGAAGAAAATTGGAATTGATGATGGAGGGAAGATCGATCGAGATGGATT
CATGGAAATGATGTTTCCCAAATTTCAAATCCATTGAGTCAATTCTTTGT
TACGGGGGACGTAAGCCAAGCAGCATTGGTGGCATCCATATGTTTTTCAA
ATCGTTCTGACAGTGATGAAAAAATTATTAGAAACATTGTGAAAAATGGT
TGGGATGAAGAAGAACAGGTTATATCTAATTTGTTGCAATCACCTTTCCT
CTTACCAGAAGATATAAGACTTTCTACAATCATAAAAGGATTGGAAGATG
ATGAAATGCCCTATTTTATTCTCTCCGCTTGTATCGGAATTCAAAGAGTA
AAACTGAAAGATGATGATCTTGAAAGTCTAGAGAAACTTTTACGAAAAGC
TGTTTTCAATGAGCATGGTGCAGTTTGTATGAGAGCTTTTATCACATTGA
ATCCATTTTTGAAATATCCGAAAGACAATCAGTTGTTTATTGATATTTTG
AGCACAAAAAAATCTCCTTTACATGAGACGGCATTATCATGGCTTGTATT
GCATGTCAGTGATAAACAAGAACTTTTGAAATTATTGAATGATGGCCATG
TGAAAGATTCATTGGTAACTGATGCAGTAAAGAAGATTGACGACCACTGC
CAAAGTCTGGCTCATGATGGCAGCAAGTCAAATTCTTGGTGAAGAATCTC
CAGTCACCATTGAAGTATTCGACTATGTTCCAAATATGATCGACTTTGAA
GCAATGTTAGATAAAGAAGATGCATTGACAGAATTTTTCGACGACCTGGA
CACAGATCATGATGAGAAACTTTCGGCAAAAGAAGTTCAAACTTTCCTTG
AAGATATTGGAAAAGAAGTTAAAATTGATGACGTCATAGAAGAGATGAAG
AAAATTGGAATTGATGATGGAGGGAAGATCGATCGAGATGGATTCATGGA
AATGATGTTTCCCAAATTTCAAATCCATTGAGTCAATTCTTTGTTACGGG
GGACGTAAGCCAAGCAGCATTGGTGGCATCCATATGTTTTTCAAATCGTT
CTGACAGTGATGAAAAAATTATTAGAAACATTGTGAAAAATGGTTGGGAT
GAAGAAGAACAGGTTATATCTAATTTGTTGCAATCACCTTTCCTCTTACC
AGAAGATATAAGACTTTCTACAATCATAAAAGGATTGGAAGATGATGAAA
TGCCCTATTTTATTCTCTCCGCTTGTATCGGAATTCAAAGAGTAAAACTG
AAAGATGATGATCTTGAAAGTCTAGAGAAACTTTTACGAAAAGCTGTTTT
CAATGAGCATGGTGCAGTTTGTATGAGAGCTTTTATCACATTGAATCCAT
TTTTGAAATATCCGAAAGACAATCAGTTGTTTATTGATATTTTGAGCACA
AAAAAATCTCCTTTACATGAGACGGCATTATCATGGCTTGTATTGCATGT
CAGTGATAAACAAGAACTTTTGAAATTATTGAATGATGGCCATGTGAAAG
ATTCATTGGTAACTGATGCAGTAAAGAAGATTGACGACCACTGCCAAAGT
CTGGCTCATGATGGCAGCAAGTCAAATTCTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00054975-exon-scaffold_247-1575043694:269172..269417 | TCONS_00054975-exon-scaffold_247-1575043694:269172..269417 | Clytia hemisphaerica | exon |
| TCONS_00054975-exon-scaffold_247-1575043694:260409..260987 | TCONS_00054975-exon-scaffold_247-1575043694:260409..260987 | Clytia hemisphaerica | exon |
| TCONS_00054975-exon-scaffold_247-1575043694:255735..256687 | TCONS_00054975-exon-scaffold_247-1575043694:255735..256687 | Clytia hemisphaerica | exon |
| TCONS_00054975-exon-scaffold_247-1510915933:269172..269417 | TCONS_00054975-exon-scaffold_247-1510915933:269172..269417 | Clytia hemisphaerica | exon |
| TCONS_00054975-exon-scaffold_247-1510915933:260409..260987 | TCONS_00054975-exon-scaffold_247-1510915933:260409..260987 | Clytia hemisphaerica | exon |
| TCONS_00054975-exon-scaffold_247-1510915933:255735..256687 | TCONS_00054975-exon-scaffold_247-1510915933:255735..256687 | Clytia hemisphaerica | exon |
| TCONS_00054975-exon-scaffold_247-1491911889:269172..269417 | TCONS_00054975-exon-scaffold_247-1491911889:269172..269417 | Clytia hemisphaerica | exon |
| TCONS_00054975-exon-scaffold_247-1491911889:260409..260987 | TCONS_00054975-exon-scaffold_247-1491911889:260409..260987 | Clytia hemisphaerica | exon |
| TCONS_00054975-exon-scaffold_247-1491911889:255735..256687 | TCONS_00054975-exon-scaffold_247-1491911889:255735..256687 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_247 | supercontig | scaffold_247:255735..269417 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005509 | calcium ion binding |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0005509 |
calcium ion binding |
Blast
The following BLAST results are available for this feature:
|
