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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00054986 ID=TCONS_00054986|Name=TCONS_00054986|organism=Clytia hemisphaerica|type=transcript|length=1176bp
taaaaatacggTAAAAATGGGATAATTTTGGATGGGAattaggcctaaaa
ccggtgtTTCTAATCCGCGGATACAGCCATAATCACCCATAATCATCCAT
AATCACCCATCGCCACCCATAACCACCCATAATCAGCAATCGGCTGACCT
CATTGGCTGTTTTTTCGTATATAAAGGAATGCACTCGCTTGTAAAATCat
tctaatacacctttcccggggTTTGTGTGGGATTTTCCCTTAGATATAAC
TAAGATATAACTAGAAATAGAATTACATGAAAACGAGGCCTGGCTGTATG
GAGGGCTGTAGAAGCCTCAATTTGTCCCACTGgggaactttgcctgactg
cttcGTCGGGCCTTgggcaaggtataaatagccagaaaaagcactccaga
CATGCTCCCCGTCCAGGGTTCGGGTCAAAGTCCCAATTTTTaaccaggtt
ttgatattttatgtttttttgggtgtagattccaaaaaaagtggtccgaa
gtccTGAAAAATTCATGGGAAGGCTCTAAAGGGGGGTTAGAACTCGTACC
AGACCAGCTTGGAGTCCCCGGTGGGATGGAAAGCAGTGAGACCTTTCTAC
AACTCGTGAACCACTTGGTGCTGACGTACACCTTCAGCCAAGTCTAAAAA
ATACTCTGAGGGTCCCTATTGAGCACTGGCCCAAGCCAAGGTAGCGAAGG
TATGACATCCTTGAGAAATTTCACCAGAGAACGGCCAGAAGTTGGCCCAG
TGGTATAAGGCGTTTGGTTCACGCACTAGGTATCCCAGGATCGAATCTGG
TCACCTTTAAAACTTTTTTCCAGATTTTGATACTTCATGTTTTTTTGGGT
GTAGATTCCGAAAAATAGGTCCGAAGTCCTGAAAAGTTGACGGAAGGGCG
CTACGGGACCGTAAATGACCCCCTCCCCTAGCGCCGGACTGGGTAAGTCT
CACGATTTGAAACCTTCTGGAGACGTCAAGCATATCAAAAGCGGAAAGCA
TGCCAAATTTCATCACTCCACCGTCACTGGTCACCAGGCTATGGGCCATG
CAAGGTACGCTGCAGGACGTCCCCATACGGACAATTGCCCGGCCGTATGG
TGTTTTTAGCTGGTCAAATTTTCTGTGAGGTATAATTAATCTAGTTCTAT
CTTAGTTATATCTAAGGCAATAATCT Run BLAST on NCBI transcript from alignment at scaffold_247:324303..325478 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00054986 ID=TCONS_00054986|Name=TCONS_00054986|organism=Clytia hemisphaerica|type=transcript|length=1176bp|location=Sequence derived from alignment at scaffold_247:324303..325478 (Clytia hemisphaerica)
AGATTATTGCCTTAGATATAACTAAGATAGAACTAGATTAATTATACCTC
ACAGAAAATTTGACCAGCTAAAAACACCATACGGCCGGGCAATTGTCCGT
ATGGGGACGTCCTGCAGCGTACCTTGCATGGCCCATAGCCTGGTGACCAG
TGACGGTGGAGTGATGAAATTTGGCATGCTTTCCGCTTTTGATATGCTTG
ACGTCTCCAGAAGGTTTCAAATCGTGAGACTTACCCAGTCCGGCGCTAGG
GGAGGGGGTCATTTACGGTCCCGTAGCGCCCTTCCGTCAACTTTTCAGGA
CTTCGGACCTATTTTTCGGAATCTACACCCAAAAAAACATGAAGTATCAA
AATCTGGAAAAAAGTTTTAAAGGTGACCAGATTCGATCCTGGGATACCTA
GTGCGTGAACCAAACGCCTTATACCACTGGGCCAACTTCTGGCCGTTCTC
TGGTGAAATTTCTCAAGGATGTCATACCTTCGCTACCTTGGCTTGGGCCA
GTGCTCAATAGGGACCCTCAGAGTATTTTTTAGACTTGGCTGAAGGTGTA
CGTCAGCACCAAGTGGTTCACGAGTTGTAGAAAGGTCTCACTGCTTTCCA
TCCCACCGGGGACTCCAAGCTGGTCTGGTACGAGTTCTAACCCCCCTTTA
GAGCCTTCCCATGAATTTTTCAggacttcggaccactttttttggaatct
acacccaaaaaaacataaaatatcaaaacctggttAAAAATTGGGACTTT
GACCCGAACCCTGGACGGGGAGCATGtctggagtgctttttctggctatt
tataccttgcccAAGGCCCGACgaagcagtcaggcaaagttcccCAGTGG
GACAAATTGAGGCTTCTACAGCCCTCCATACAGCCAGGCCTCGTTTTCAT
GTAATTCTATTTCTAGTTATATCTTAGTTATATCTAAGGGAAAATCCCAC
ACAAAccccgggaaaggtgtattagaatGATTTTACAAGCGAGTGCATTC
CTTTATATACGAAAAAACAGCCAATGAGGTCAGCCGATTGCTGATTATGG
GTGGTTATGGGTGGCGATGGGTGATTATGGATGATTATGGGTGATTATGG
CTGTATCCGCGGATTAGAAacaccggttttaggcctaatTCCCATCCAAA
ATTATCCCATTTTTAccgtattttta
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00054986-exon-scaffold_247-1491911889:324303..325478 | TCONS_00054986-exon-scaffold_247-1491911889:324303..325478 | Clytia hemisphaerica | exon |
| TCONS_00054986-exon-scaffold_247-1510915933:324303..325478 | TCONS_00054986-exon-scaffold_247-1510915933:324303..325478 | Clytia hemisphaerica | exon |
| TCONS_00054986-exon-scaffold_247-1575043694:324303..325478 | TCONS_00054986-exon-scaffold_247-1575043694:324303..325478 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_247 | supercontig | scaffold_247:324303..325478 . |
Blast
The following BLAST results are available for this feature:
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