TCONS_00054995 (transcript) - C. hemisphaerica

Overview
NameTCONS_00054995
Unique NameTCONS_00054995
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length4538

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00054995 ID=TCONS_00054995|Name=TCONS_00054995|organism=Clytia hemisphaerica|type=transcript|length=4538bp
tcttcATTGAATTTTTTAGCAATAAAATTAGAATGTAAATAAAATGACAG
GGAGTACAATAAACAAAAGATTGAACCCCAAAATGGAATCAATTCAGCCG
GTGACTCATTGTCCAAAGcttgatttgaaaacaaaagctttagaagaTCA
GAATATGAAAAAACGTGGAAGAAAGAGGAAGCGCATCACCTGCAGTAGCT
CAAGGCGAGCAAAGAAGTCAAAGATCGAACCTCTCATAATTACCACTGAA
AAATGCTGTTTCTGTTTGATGGGACCTGACAAAGAAAAAGGAACTTTTTT
TCAAGATCAAAATTCTAATATTGCTGCACATCAATTTTGCTTGCTTTTTT
CGGCTGGTCTTCCACAAGCCGGAGAGGACAATGAGGGATTTGAAGGTTTC
CTTGTTGCTGACATCCTCAAAGAAGTACAGAGAGTTTCGAAACTAatttg
tAAATTTTGTGGACGGAATGGAGCCAACCTTGGTTGTTGTGTTCAACATT
GCCGATCAATTTATCATTTTAATTGTGGATATAAGGAAGGATTACAGTTC
CAATTTTGTGGATCTTTTGACACATATTGTCATGTTCACCGATCACATCA
AGATTTATCGCTAGTGAGAACCAAGCCAAAACACCAATTTTGTCCAATTT
GTTTAGAGAATTTTTCCTCTGTACCACTAGTATCCAGTGAAACAGTATTG
AAAACACCTTGCTGTAATAATGTCTTTGTCCACAAAGAATGTGTGCAGAG
ACAAGCCTCAGTGGCAGGTTACTTCTTTCGATGCCCTTGCTGTAATAATA
AAGATGAGTTTGGGGATGAGATGGCAAAATATGGAATCTATATCCCATCA
AGAGATGCTGCTTGGGAAGAATCGAATGCTTACAACGACTTATTACAAGA
ATACGATAAatgtgatttcaacaattgCTCATGTACCAGAGGACGAAAAT
ATTCCACTCAAGCAGGAAAGTGGCATTTACTACGCTGTTACCTATGTGGC
CAAAGTGCAGTTCATGTTAAATGTCTTGGTCGTTGTTATATACCAGGTAT
TGGCTACGTATGTGCCACATGTAACAAAGTTGCCAAACTGAACAAAGAAA
ATATAGAGACTGTCCAACAACAAAGTTATACCGAACGTTTAAAAGAACAT
AAAAGAAGGTTGAATCTCCTGAAATCGAGAAACGACCCTGTGTTATTAGC
ATCTGAGGTCTTTAGTAAAGAAATTTTGCGTAAAAAATTTAACATTGTGA
ATGATTGCAAAGTAAGGCTGAGGAGATTGGACATAAATATTAAAAGCAGA
AAAATGAAGTTATCCACAGCATTGAAGTTTCTTCAAACACCAAATGAGAA
CAAGACACATCTGGTGACGACCAAATCTGTACTTGCTCCAGTAAGAAAAT
CTCCACGGAAAAGCCCTCTTAAATCCCTCATTCAAGTTCAGCCCAAAAAA
CTTGGCGTCAACACAAATTACATGTTTCGTGATCGAGGCTCAAGAGGAGA
GAACATGTGGCTTGAATCCCAATCTGACTTGAGCGAGATCAACTCGACaa
ctttaaaaacaaacaatgaaaatagaaCTCATAAAGTAATATCAAACGAA
GATGATGATTGTCACAGCGTCATTGATCCAAATAACAATCAATTTGTGaa
caaaaatcttgaaaaagagGAATTGGATAACGAGTCACCCAAAGGCAGTA
CAGCTGATACCCAAGACAGGGAGAATATTGTGGAATCTTTGAAACAAACC
GGTATGAATACCAAAAGAAAGCCAGCCAAACTAAGTTGTCAAGAAAGATT
GATGTCGGCGATTGGAGAGCTGTAGTATCTCACTTACAGGAAAGGAGAAA
TGGCAATTGTGGGACAGATTGCAACGAGCTTCAAGTAGAACAATCCAAAC
TTGTTTTTCCAGAAGTTGAAGAAATTACGTCTAATATCAAACTTGCTGAA
CGATTGAAATCTGTAGCCGTTAAACACCAAGAAACAGCGAATTATTTTCG
CCCAAGAGAAAGCAAAGTAGAATCTGACGTCTCCACAAttactggaaaat
ttgactCTCAGATGATGAGAACGTTAAAAAGTAAAGATGCCATCGTATCT
GATGAAAAAGTCAATGAAtcatttcaagaaaaaattaaattgataCCACC
TATTTCAAAAATAGCACCAACAAGCACAAAAGATGCCAAACaacccaaaa
aatcaaaaacgtcTATTGCTGAAGAATCAAAGCATGTTTTAAAGTCCATT
AAATCAGAAATATTATCTCCCAGAAATAGGGAAAACCAAAATATAGAAAC
AAGACCTTCTTCCACTCTCTCAAAAAACACCAACACTACAATAAAATCGA
TCCAACAGCAATATTTGTCACCCAGGGCTATCCCAACTATCCATACCACT
ATCAGATCTGGTGCTGTTCCAACAATGAGATTGAAACCGCAATCACCTTT
CAAAGTGGTCTGGTCACCAAATATGAAGGTTTCATTGGATGATTTCTTAA
ACTCGCCCCAGACTCCTGGTCGATGTTTCTTAGGCTTTGACATGGATTTA
AAGCCAATATACTGTGATAAATGTAATTTTTGTGTTACACCTAAAACGTC
AACTAAGCAGGCTAAGCTGACATCAACCAAATCAATATCTACGCTCTCAG
AATTATCCGAATCGAAGCTGGTTGCTGATAGTAAAACTAAAACTTCAATT
ACCCAAAATGTTCCCTACGCCTCAGTAACCAAGAATGCATTTACACCAAG
GGTAACCCGAGCTAGTAGTATCAGGTCGAAACAAATCATGACAGAGTCAC
CTTTGACTCCGGATTGCTGTTTCTTGGGTTTTGATAGTGAGTTAAAACCT
GTGTTTTGTAAAGAATGCAAGATAGCATCTCCGTCTGCTCGGACCACCGG
ACCATGCTCAAAACAACGGAACTTTCTGACACCTATGAAAACTGATTTTG
CAGATTCCAAATTTGGTGGCTTCATCAATAAAGAAAACCTGATGACATCT
AGAAAAcaactttacagaccagatgaAAGGAAGTACATTCCAGTCCCTTG
TTTAGATATCAAACAGCTTATCGGTAAGAACCCAGATGATGAGAAATACA
CTAAGATATGGACACCCTATCAAGATTGCTCGCAATTATTTAGACCATAT
TCTTACAGGGATGCGAAGGTTGGATGTGGATCAGATACTCGATCCAATGA
CATTGCGATGGCATTATTGGAGGAGGCTTTCGAGAACGATGACGAATTGG
TTATTGCCGTTGAATCAGGTTGATTTGATGTGGTTTCAAACAATTTCATT
GAAGGAAGATCTGGAGGTATTGCTTCAACCGTCGGTGCAAATGATCTTGT
CCATGGATTGAAATTTATGGAATCCATTGAATCTTCATCTGTATTCATCG
TTGAATGGACTTGATATATTGTCGGATAGTTTCAATAGGGTTGAATATTT
ATATGAAATCAATCCATTGTTTGTTTCTCATGGTTTAGTGTTGTCGACGC
AATTGCTTCGGGCTCTATATGAAAACAGTTAATATGCTACCAATATTTTT
CATCGTTCAGTTTGAATGTCTGCTCTAGAAACAACACTTTATATTAAATG
CACCTATTAACCCTCAACGATGCGGTTGGCTTTTAAGAGGACTTGAAAGG
TTTTTTCCCGGTGCACCTCATTTTAAGCTGCTTCCATAACAAGGCAAATT
TCGGCACAAAGTTTTATTCCGTACGAGAGGCATCTCCCTGAGTTCCTCTG
ATGGGGTGAGAACTATAAAGCATTCGAATAGCTTTACTAAAAAATTTCAA
TACACTTGTTTTTACGATACAGTCATCGAAAAGAATTTCCCATTATACTT
TCGTTACCATTCTCCTCCAAAAGCGTTAAGGGTTGAGAGGTGTATTAACA
CATCGGTCAAAAAGAAGTAGAAATACCCTGTCAAGAAAATTTGGTATTTC
gatctgtttttattttgttacagCAAAATACTTATAGTGTAAATAGACTC
GTCATGAAAGACATTATGTtgcatatatatatattttttttttgatacag
tTTTTAAAGATGTAAAAAACGACATTTTGGTTTTAGCACGAGTTCTGAAA
AGGGTCAAATTCCTAATTCCTAGTCTCCCAGTGGCAGATTGTATCGTTAT
CTTGCGCTTTGAATTAtatcttacacgttttttttttattagaacctagt
ttataagaacatataggctgaaactcgtcgaaaaattaagaacatcttaa
gaacatgcccagcctcagtttggaaaaaaatgacaagaaactacaatttt
ttcctctttttaagcagttttaaccgaatttaggggtggatcttcaaaag
tcgagagtcaaatattgtccaaattttgccaaatttaagtgctctttatt
ttgtatcatattgtcgatttagagtagtctgaaaaattaagaacgcattt
gagaacattttagctgaaaattgctaaaaaaaataagcacatccaggctc
agccaaattttaggtgttctaataaaaaaaaaacgtgt
Run BLAST on NCBI

transcript from alignment at scaffold_248:204643..211987+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00054995 ID=TCONS_00054995|Name=TCONS_00054995|organism=Clytia hemisphaerica|type=transcript|length=7345bp|location=Sequence derived from alignment at scaffold_248:204643..211987+ (Clytia hemisphaerica)
tcttcATTGAATTTTTTAGCAATAAAATTAGAATGTAAATAAAATGACAG
GGAGTACAATAAACAAAAGATTGAACCCCAAAATGGAATCAATTCAGCCG
GTGACTCATTGTCCAAAGGTATTTTTCGTTTTATCTTCTCTATTGCTGCA
ATTGAATATCTATACTTCtagtatatatattttttcaaactaACTAAGAT
AATCTAAATATTCATTAACCAACAGATGcgtttttcttacttttctaTGA
TTTAATGTAGTGAACTGGTTTTTACCtacaaaaacatattttttggaTAT
AAATGATTGAAAGGGTAGGAAGGAATCATAGAAAGGAACCCTACTTTAGA
ATTTATCAATACAAAAGCTTGTCCGTATCAAGTTAAGCTTGTAGGAAATG
AAGAACTTTGACCAAATTACAGATCACTTCTTCACTATAACTATAAACTT
TCTTTTTGCACAAAGcttgatttgaaaacaaaagctttagaagaTCAGAA
TATGAAAAAACGTGGAAGAAAGAGGAAGCGCATCACCTGCAGTAGCTCAA
GGCGAGCAAAGAAGTCAAAGATCGAACCTCTCATAATTACCACTGAAAGT
AAGTTAAAAGTAACCAAATCTTGAGAACGGTGTTTTTAAAGATCACAaga
ttatttcatttttaagattttaaatgcCAGTATATATTTTACTGAAGTGA
ATTCTCCTCTATCTCAAACTTGTTCCGCTCAATGAAATGGGGACATATTC
TTTAATATTCTTTTGTATGcaactttttcattttcccttCTAGAATGCTG
TTTCTGTTTGATGGGACCTGACAAAGAAAAAGGAACTTTTTTTCAAGATC
AAAATTCTAATATTGCTGCACATCAATTTTGCTTGGTATGTTGTATTTCA
TGATTTTCCAAattaatcgtcagccgtgcaaaattactcgaatctgattg
gtttagaggagtgtgattaatcgttaattgcactattaccacttttttca
ctcttcggcgggggacacttttgtccccttattcttttctctcccaagtc
ctgtgtcagagacttttttttactatataataaaaaacaaagacattttt
tttcttcaatataaaaaagaacaaagaaattttacgttacaattcGCTTT
GTGTACATAAGTttcgaatgtcaaaaattttccctttttctaaaaaaact
atgatttactaatgattatttactgacgattacctcggaatggtatgttt
tgtcgtgcaattaacgattaatcactcgtaacaaaagagaaaataccgta
atttgatCAAATTGTTCATACCCTTTTTCTCAGAGTGATTCAAATCTTAT
TTGGATGTACTGAAGCTTTATCCTAGCTATaagatttaaagattttgttt
ttttgtttactaGCTTTTTTCGGCTGGTCTTCCACAAGCCGGAGAGGACA
ATGAGGGATTTGAAGGTTTCCTTGTTGCTGACATCCTCAAAGAAGTACAG
AGAGTTTCGAAACTAGTAAGAAATCTTTGTTGCTATTCTAATGCTTTGTT
GTTTTAAAAAGCTTTGAAGGTGTTAACCAGAAAAATAGGACTTAAACTTT
CAACAAAAAGTATATTCATAAAGTAATTTTTAATCTGAATCCTtctatta
aacattaaaaaaattttgctgttcAGGACTATTGAGCTGTGATACTTGTG
GAACGTACCTTCTTATAAACCTGTATACGTTATATCAGATTGTATCCTAA
TCTCATTCTATTCTTTCTTtgtgaattttcagatttgtAAATTTTGTGGA
CGGAATGGAGCCAACCTTGGTTGTTGTGTTCAACATTGCCGATCAATTTA
TCATTTTAATTGTGGATATAAGGAAGGATTACAGTTCCAATTTTGTGGAT
CTTTTGAGTAAGCTTTTCAAGTCATATTGGCATCGAAGtgtaaatttttc
aatcttcttAGTTTCTTTACCATAATCGAGAAGAAAAGTACTCTCTATTT
GATAAGAAATTTCAACTGCAAACTTGGTTTGAAACCTTATTCATACATGA
AGAAGCAATACAGATTATTGAAGACTGAAATCCCCTTAAAGACATGGaca
caaaaatcttcaaaagattttgaagaGTAATTTTATGGATATTGGATGTA
TTTCTTTTGGCATAAAAGCATGGAAGAAGAAGTGATTCTGAAATTCTGAA
TAAGCTTaagtttttcttccttttttactTCATAGCAACATGTTTTAGAA
AGTTTCTCACAATACTTTATCTCCTTTTAGCACATATTGTCATGTTCACC
GATCACATCAAGATTTATCGCTAGTGAGAACCAAGCCAAAACACCAATTT
TGTCCAATTTGTTTAGAGAATTTTTCCTCTGTACCACTAGTATCCAGTGA
AACAGTATTGAAAACACCTTGCTGTAATAATGTCTTTGTCCACAAAGAAT
GTGTGCAGGTGAGAAAAAGAAATCTCTGAAGAAATATCTTGAAGAAATCT
TCTTGGATTGCATTGACCTTTAGTTACTAGATTTTATTCCAACattaaac
aaaacaattatGCTGATAAACCTTTAGTTAGAATTCCTATTTTGAAGATC
ATTGTCGTAAATGCCTTTATTTTGCAGTATCCCTTTTTGACTTGAAtgat
ttgactttttaaagtctGTCTTAAAAGCCAATCTGGAACTATTCTTCTAA
AACTCCCTTATAGCCAGAAGTACGAGTTCTTATAATCCCCCAATGTCAAA
ATCATAAGATAGACACTGGAATATTCGAAAGTGTTCCTTTATAGTTTGAC
TTCCGCAAAAGTAATGAGATTTTCCTTATAAGTGTATTAgatcttttttt
ctgaaactCTAACTCTAACCTGCTATTTTTATAAACTTATTTAGAGACAA
GCCTCAGTGGCAGGTTACTTCTTTCGATGCCCTTGCTGTAATAATAAAGA
TGAGTTTGGGGATGAGATGGCAAAATATGGAATCTATATCCCATCAAGGT
AGTACTTCattcatttaaaatatttttaacaatgtAATTACTCTCaatga
tttttatcaaaactcAGGCTTCATCTAATTTCTATTTTCAAAGGTTGAAC
AACTATTCTGTCTTCTTAGAGATGCTGCTTGGGAAGAATCGAATGCTTAC
AACGACTTATTACAAGAATACGATAAatgtgatttcaacaattgCTCATG
TACCAGAGGACGAAAATATTCCACTCAAGCAGGGTTTGTATTTCATAATG
TGTTGCTGCTTCTGTCCTTCCCcattaatttaaaaattttgcttgTAGAT
GCTATGTGTAAAAAACCAGTCTAAAAGTCTTAAATTATTAAGATTATCCA
TTTTTAAGTTGCCTTTAGACTCTACCTTAAAGATTTCTTAAACCTTCTGT
AATTTTAACTCTTTATTTAGAAAGTGGCATTTACTACGCTGTTACCTATG
TGGCCAAAGTGCAGTTCATGTTAAATGTCTTGGTCGTTGTTATATACCAG
GTATTGGCTACGTATGTGCCACATGTAACAAAGTTGCCAAACTGAACAAA
GAAAATATAGAGACTGTCCAACAACAAAGTTATACCGAACGTTTAAAAGA
ACATAAAAGAAGGTTGAATCTCCTGAAATCGAGAAACGACCCTGTGTTAT
TAGCATCTGAGGTCTTTAGTAAAGAAATTTTGCGTAAAAAATTTAACATT
GTGAATGATTGCAAAGTAAGGCTGAGGAGATTGGACATAAATATTAAAAG
CAGAAAAATGAAGTTATCCACAGCATTGAAGTTTCTTCAAACACCAAATG
AGAACAAGACACATCTGGTGACGACCAAATCTGGTAAGgttgtgaaatat
tttaaagCAAAGCACTTTCACTAGACAGACTGGTTGCATAGGTTGCATAT
GAATCTCCTACCTAATCATTTTGTGTTTTCAGTGAATTTATGACTATTCT
AAACAAACACAAgaggaattttgaaaatttttattgaaagtcTTATTCTT
TACTTCCAGTACTTGCTCCAGTAAGAAAATCTCCACGGAAAAGCCCTCTT
AAATCCCTCATTCAAGTTCAGCCCAAAAAACTTGGCGTCAACACAAATTA
CATGTTTCGTGATCGAGGCTCAAGAGGAGAGAACATGTGGCTTGAATCCC
AATCTGACTTGAGCGAGATCAACTCGACaactttaaaaacaaacaatgaa
aatagaaCTCATAAAGTAATATCAAACGAAGATGATGATTGTCACAGCGT
CATTGATCCAAATAACAATCAATTTGTGaacaaaaatcttgaaaaagagG
AATTGGATAACGAGTCACCCAAAGGCAGTACAGCTGATACCCAAGACAGG
GAGAATATTGTGGAATCTTTGAAACAAACCGGTATGAATACCAAAAGAAA
GCCAGCCAAACTAGTTAGTAAAGTAGTTAGTGCCTTCATGCAAGTTTTTC
CTTcaattcaataattttttttactaaactcacttgaaatttttatttcg
agCCATTAGTGCAGTATGGAAATGAAGTTAATGCATGGTCGTCCATATTC
TTTTTAGTGTAAAGTTTTCTTTAAATTCTCATACTTTTAGAGTTGTCAAG
AAAGATTGATGTCGGCGATTGGAGAGCTGTAGTATCTCACTTACAGGAAA
GGAGAAATGGCAATTGTGGGACAGATTGCAACGAGCTTCAAGTAGAACAA
TCCAAACTTGTTTTTCCAGAAGTTGAAGAAATTACGTCTAATATCAAACT
TGCTGAACGATTGAAATCTGTAGCCGTTAAACACCAAGAAACAGCGAATT
ATTTTCGCCCAAGAGAAAGCAAAGTAGAATCTGACGTCTCCACAAttact
ggaaaatttgactCTCAGATGATGAGAACGTTAAAAAGTAAAGATGCCAT
CGTATCTGATGAAAAAGTCAATGAAtcatttcaagaaaaaattaaattga
taCCACCTATTTCAAAAATAGCACCAACAAGCACAAAAGATGCCAAACaa
cccaaaaaatcaaaaacgtcTATTGCTGAAGAATCAAAGCATGTTTTAAA
GTCCATTAAATCAGAAATATTATCTCCCAGAAATAGGGAAAACCAAAATA
TAGAAACAAGACCTTCTTCCACTCTCTCAAAAAACACCAACACTACAATA
AAATCGATCCAACAGCAATATTTGTCACCCAGGGCTATCCCAACTATCCA
TACCACTATCAGATCTGGTGCTGTTCCAACAATGAGATTGAAACCGCAAT
CACCTTTCAAAGTGGTCTGGTCACCAAATATGAAGGTTTCATTGGATGAT
TTCTTAAACTCGCCCCAGACTCCTGGTCGATGTTTCTTAGGCTTTGACAT
GGATTTAAAGCCAATATACTGTGATAAATGTAATTTTTGTGTTACACCTA
AAACGTCAACTAAGCAGGCTAAGCTGACATCAACCAAATCAATATCTACG
CTCTCAGAATTATCCGAATCGAAGCTGGTTGCTGATAGTAAAACTAAAAC
TTCAATTACCCAAAATGTTCCCTACGCCTCAGTAACCAAGAATGCATTTA
CACCAAGGGTAACCCGAGCTAGTAGTATCAGGTCGAAACAAATCATGACA
GAGTCACCTTTGACTCCGGATTGCTGTTTCTTGGGTTTTGATAGTGAGTT
AAAACCTGTGTTTTGTAAAGAATGCAAGATAGCATCTCCGTCTGCTCGGA
CCACCGGACCATGCTCAAAACAACGGAACTTTCTGACACCTATGAAAACT
GATTTTGCAGATTCCAAATTTGGTGGCTTCATCAATAAAGAAAACCTGAT
GACATCTAGAAAAcaactttacagaccagatgaAAGGAAGTACATTCCAG
TCCCTTGTTTAGATATCAAACAGCTTATCGGTAAGAACCCAGATGATGAG
AAATACACTAAGATATGGACACCCTATCAAGATTGCTCGCAATTATTTAG
ACCATATTCTTACAGGGATGCGAAGGTTGGATGTGGATCAGATACTCGAT
CCAATGACATTGCGATGGCATTATTGGAGGAGGCTTTCGAGAACGATGAC
GAATTGGTTATTGCCGTTGAATCAGGTTGATTTGATGTGGTTTCAAACAA
TTTCATTGAAGGAAGATCTGGAGGTATTGCTTCAACCGTCGGTGCAAATG
ATCTTGTCCATGGATTGAAATTTATGGAATCCATTGAATCTTCATCTGTA
TTCATCGTTGAATGGACTTGATATATTGTCGGATAGTTTCAATAGGGTTG
AATATTTATATGAAATCAATCCATTGTTTGTTTCTCATGGTTTAGTGTTG
TCGACGCAATTGCTTCGGGCTCTATATGAAAACAGTTAATATGCTACCAA
TATTTTTCATCGTTCAGTTTGAATGTCTGCTCTAGAAACAACACTTTATA
TTAAATGCACCTATTAACCCTCAACGATGCGGTTGGCTTTTAAGAGGACT
TGAAAGGTTTTTTCCCGGTGCACCTCATTTTAAGCTGCTTCCATAACAAG
GCAAATTTCGGCACAAAGTTTTATTCCGTACGAGAGGCATCTCCCTGAGT
TCCTCTGATGGGGTGAGAACTATAAAGCATTCGAATAGCTTTACTAAAAA
ATTTCAATACACTTGTTTTTACGATACAGTCATCGAAAAGAATTTCCCAT
TATACTTTCGTTACCATTCTCCTCCAAAAGCGTTAAGGGTTGAGAGGTGT
ATTAACACATCGGTCAAAAAGAAGTAGAAATACCCTGTCAAGAAAATTTG
GTATTTCgatctgtttttattttgttacagCAAAATACTTATAGTGTAAA
TAGACTCGTCATGAAAGACATTATGTtgcatatatatatatttttttttt
gatacagtTTTTAAAGATGTAAAAAACGACATTTTGGTTTTAGCACGAGT
TCTGAAAAGGGTCAAATTCCTAATTCCTAGTCTCCCAGTGGCAGATTGTA
TCGTTATCTTGCGCTTTGAATTAtatcttacacgttttttttttattaga
acctagtttataagaacatataggctgaaactcgtcgaaaaattaagaac
atcttaagaacatgcccagcctcagtttggaaaaaaatgacaagaaacta
caattttttcctctttttaagcagttttaaccgaatttaggggtggatct
tcaaaagtcgagagtcaaatattgtccaaattttgccaaatttaagtgct
ctttattttgtatcatattgtcgatttagagtagtctgaaaaattaagaa
cgcatttgagaacattttagctgaaaattgctaaaaaaaataagcacatc
caggctcagccaaattttaggtgttctaataaaaaaaaaacgtgt
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034653XLOC_034653Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00054995-exon-scaffold_248-1491911889:204643..204760TCONS_00054995-exon-scaffold_248-1491911889:204643..204760Clytia hemisphaericaexon
TCONS_00054995-exon-scaffold_248-1510915933:204643..204760TCONS_00054995-exon-scaffold_248-1510915933:204643..204760Clytia hemisphaericaexon
TCONS_00054995-exon-scaffold_248-1575043694:204643..204760TCONS_00054995-exon-scaffold_248-1575043694:204643..204760Clytia hemisphaericaexon
TCONS_00054995-exon-scaffold_248-1491911889:205108..205240TCONS_00054995-exon-scaffold_248-1491911889:205108..205240Clytia hemisphaericaexon
TCONS_00054995-exon-scaffold_248-1510915933:205108..205240TCONS_00054995-exon-scaffold_248-1510915933:205108..205240Clytia hemisphaericaexon
TCONS_00054995-exon-scaffold_248-1575043694:205108..205240TCONS_00054995-exon-scaffold_248-1575043694:205108..205240Clytia hemisphaericaexon
TCONS_00054995-exon-scaffold_248-1491911889:205436..205527TCONS_00054995-exon-scaffold_248-1491911889:205436..205527Clytia hemisphaericaexon
TCONS_00054995-exon-scaffold_248-1510915933:205436..205527TCONS_00054995-exon-scaffold_248-1510915933:205436..205527Clytia hemisphaericaexon
TCONS_00054995-exon-scaffold_248-1575043694:205436..205527TCONS_00054995-exon-scaffold_248-1575043694:205436..205527Clytia hemisphaericaexon
TCONS_00054995-exon-scaffold_248-1491911889:206056..206157TCONS_00054995-exon-scaffold_248-1491911889:206056..206157Clytia hemisphaericaexon
TCONS_00054995-exon-scaffold_248-1510915933:206056..206157TCONS_00054995-exon-scaffold_248-1510915933:206056..206157Clytia hemisphaericaexon
TCONS_00054995-exon-scaffold_248-1575043694:206056..206157TCONS_00054995-exon-scaffold_248-1575043694:206056..206157Clytia hemisphaericaexon
TCONS_00054995-exon-scaffold_248-1491911889:206425..206549TCONS_00054995-exon-scaffold_248-1491911889:206425..206549Clytia hemisphaericaexon
TCONS_00054995-exon-scaffold_248-1510915933:206425..206549TCONS_00054995-exon-scaffold_248-1510915933:206425..206549Clytia hemisphaericaexon
TCONS_00054995-exon-scaffold_248-1575043694:206425..206549TCONS_00054995-exon-scaffold_248-1575043694:206425..206549Clytia hemisphaericaexon
TCONS_00054995-exon-scaffold_248-1491911889:206923..207100TCONS_00054995-exon-scaffold_248-1491911889:206923..207100Clytia hemisphaericaexon
TCONS_00054995-exon-scaffold_248-1510915933:206923..207100TCONS_00054995-exon-scaffold_248-1510915933:206923..207100Clytia hemisphaericaexon
TCONS_00054995-exon-scaffold_248-1575043694:206923..207100TCONS_00054995-exon-scaffold_248-1575043694:206923..207100Clytia hemisphaericaexon
TCONS_00054995-exon-scaffold_248-1491911889:207537..207640TCONS_00054995-exon-scaffold_248-1491911889:207537..207640Clytia hemisphaericaexon
TCONS_00054995-exon-scaffold_248-1510915933:207537..207640TCONS_00054995-exon-scaffold_248-1510915933:207537..207640Clytia hemisphaericaexon
TCONS_00054995-exon-scaffold_248-1575043694:207537..207640TCONS_00054995-exon-scaffold_248-1575043694:207537..207640Clytia hemisphaericaexon
TCONS_00054995-exon-scaffold_248-1491911889:207762..207875TCONS_00054995-exon-scaffold_248-1491911889:207762..207875Clytia hemisphaericaexon
TCONS_00054995-exon-scaffold_248-1510915933:207762..207875TCONS_00054995-exon-scaffold_248-1510915933:207762..207875Clytia hemisphaericaexon
TCONS_00054995-exon-scaffold_248-1575043694:207762..207875TCONS_00054995-exon-scaffold_248-1575043694:207762..207875Clytia hemisphaericaexon
TCONS_00054995-exon-scaffold_248-1491911889:208063..208475TCONS_00054995-exon-scaffold_248-1491911889:208063..208475Clytia hemisphaericaexon
TCONS_00054995-exon-scaffold_248-1510915933:208063..208475TCONS_00054995-exon-scaffold_248-1510915933:208063..208475Clytia hemisphaericaexon
TCONS_00054995-exon-scaffold_248-1575043694:208063..208475TCONS_00054995-exon-scaffold_248-1575043694:208063..208475Clytia hemisphaericaexon
TCONS_00054995-exon-scaffold_248-1491911889:208652..209055TCONS_00054995-exon-scaffold_248-1491911889:208652..209055Clytia hemisphaericaexon
TCONS_00054995-exon-scaffold_248-1510915933:208652..209055TCONS_00054995-exon-scaffold_248-1510915933:208652..209055Clytia hemisphaericaexon
TCONS_00054995-exon-scaffold_248-1575043694:208652..209055TCONS_00054995-exon-scaffold_248-1575043694:208652..209055Clytia hemisphaericaexon
TCONS_00054995-exon-scaffold_248-1491911889:209233..211987TCONS_00054995-exon-scaffold_248-1491911889:209233..211987Clytia hemisphaericaexon
TCONS_00054995-exon-scaffold_248-1510915933:209233..211987TCONS_00054995-exon-scaffold_248-1510915933:209233..211987Clytia hemisphaericaexon
TCONS_00054995-exon-scaffold_248-1575043694:209233..211987TCONS_00054995-exon-scaffold_248-1575043694:209233..211987Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_248supercontigscaffold_248:204643..211987 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.104532	0.637379	0.565919	0.0029121	3.89572	3.42544	2.60668	4.05413	0.765363	1.22748	7.1061e-06	0.353758	0.985235	0.993632	0.716951	2.55319	2.82361e-10	0.481951	0.399046	0.250091	0.000215738	1.74496	1.38521	0.894056	1.96076	2.27131	7.10593e-05	0.224239	0.870656	7.59265e-08
Blast
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BLAST of TCONS_00054995 vs. Swiss-Prot (Human)
Match: G2E3 (G2/M phase-specific E3 ubiquitin-protein ligase OS=Homo sapiens GN=G2E3 PE=1 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 4.304e-59
Identity = 107/238 (44.96%), Postives = 144/238 (60.50%), Query Frame = 2 
Query:  317 NIAAHQFCLLFSAGLPQAGEDNEGFEGFLVADILKEVQRVSKLICKFCGRNGANLGCCVQHCRSIYHFNCGYKEGLQFQFCGSFDTYCHVHRSHQDLSLVRTKPKHQFCPICLENFSSVPLVSSETVLKTPCCNNVFVHKECVQRQASVAG-YFFRCPCCNNKDEFGDEMAKYGIYIPSRDAAWE-ESNAYNDLLQEYDKCDFNNCSCTRGRKYSTQAGKWHLLRCYLCGQSAVHVKC 1024
            N+  H +CLL S+G+ Q G++ EG  GFL+ DI KEV R SKL C  C +NGA++GC    C+  YHF CG +    FQF G+F ++C  HR  Q ++    +     C ICLE    +P   S  +L++PCC N + H++C+Q QA  AG +FFRC  CNN D F  EM + GI+IP +DA+WE E NAY +LLQ Y++CD   C C  GR Y+    KW + RC  CG S  H+ C
Sbjct:   37 NLTVHYYCLLMSSGIWQRGKEEEGVYGFLIEDIRKEVNRASKLKCCVCKKNGASIGCVAPRCKRSYHFPCGLQRECIFQFTGNFASFCWDHRPVQIITSNNYRESLP-CTICLEFIEPIP---SYNILRSPCCKNAWFHRDCLQVQAINAGVFFFRCTICNNSDIFQKEMLRMGIHIPEKDASWELEENAYQELLQHYERCDVRRCRCKEGRDYNAPDSKWEIKRCQCCGSSGTHLAC 270
The following BLAST results are available for this feature:
BLAST of TCONS_00054995 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
G2E34.304e-5944.96G2/M phase-specific E3 ubiquitin-protein ligase OS... [more]
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