TCONS_00055011 (transcript) - C. hemisphaerica

Overview
NameTCONS_00055011
Unique NameTCONS_00055011
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2838

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00055011 ID=TCONS_00055011|Name=TCONS_00055011|organism=Clytia hemisphaerica|type=transcript|length=2838bp
ATAACAATTTGCGCTCTGTTTCCGTTTTTCTTATTGTATTTCTCACTTAT
ATCTTTAGGTGCgtaattatgaaaaatagatgaataaaaataaatagaCA
GATATGACCGTTCCAACCTGATTTATCCTGAGGTATCTGGAAAGTATTAG
CAAGGACATTATGGCATCAGCTCGGGGTGATATTTTCGTGCAGAATGATT
CAGCTTTTGAGGgtaaaaacaacaaagacaaaatgtGGACAGCATGTTTT
GCTGCATTTTCCGCTGCCCTGGCTACTGTAAATTTTGGATATGCTCTTGG
ATTCACAGCAGAAGCAGAATTATCTGAACAATTCAATTCAAACAACTCTG
CTATTGATTTGTCAATGTTGAATGGGAATTCATCCAAAGGTTTCTCTATG
TGTGATcctgattttgatatttttgcgTCAGTTGTGGCACTAGGCGCTCT
AGTTGGTGGTCTCTTGGCTGGCATACTGATTGATAAGATTGGACGGAAAA
CTACCATTATCTCAACAactattttctactttcttgGATGGGTTCTCATT
GCAAACAGTTATTGTTATTATGGTAAGCACGGAGGCATTGGTGATCCAGA
ATTTTGTCGAAAACACTCAAAACAATGGTATTATAGCATGCTGTATTGTG
GACGTGTTATTACTGGAATTGGTGTGGGTATGAGCTCGCTTGTGGTGCCT
GTGTACATTGCGGAAATTGCATCAGCGCGCATGCGTGGAGCACTTGGAAA
CATCAATCAGTTGTCAATCAATTTTGGATTTGTTGTAGCCTATTTGACAG
GATACAAACAAAATCTTCCAACAACAGCTTACGTACCAATCGGAATCTCA
ATTCTCAACCTTATTCTGATGGTTTTCTTCTTACCTGAGACACCGCGATA
TCTTTTGGCAAACAACAGACGACATGATGCCATCCTTGCGTTGTATTGGC
TAAGAGGTCAAGACTATCCAGTGGAAGaggaatgttttgaaattgaaggC
CATgttaattttgGAACTCAAGAGCAATGGCAATGGAAGGATCTGAAAAG
TTCCACATTCTACTGGCCGCTCATCATTgcactttttttgatgtttttcc
aAGAATTCAGTGTGGACCGGTTTGGACGCCGAAAACTCCTCTTATCCGGT
AGTGTTGGAATGTTTATCTCACTAATTCTAGTAAGTGTGTACGTCCACTC
TTATCCTGTTTATTATAATAATGTTGATGACATTTCTAATTTCTTTTCGA
AACAAGAAAACACAACATATGCCATTTTAGCTTTTGTGTGTATACTCTGT
TTTATTGCAATGTTCTCAATCGGATGGGGCCCGTTGCCATGGTTACTCAT
GTCTGAATTATTCCCAATCAAGACAAGAGGTATTGCAACTACAATTGTCA
CTTTATCAAACTGGTTATTTGTGTTTACAACGACTTCATCTTTCTGTTTT
CTCGTGAATAAAATNNNNNNNNNNNNNNGCTCAATTGAAACCTGGAGATA
CACATATATTGGATACTTTGACGAAAGGCTCAGAAGAATATGCAATATAT
GTGTGTTTCACACTGTTCATTTTCACCGGAATTTCCTGCTTTTTAGTGGA
CCGGTTTGGACGCCGAAAACTCCTCTTATCCGGTAGTGTTGGAATGTTTA
TCTCACTAATTCTAGTAAGTGTGTACGTCCACTCTTATCCTGTTTATTAT
AATAATGTTGATGACATTTCTAATTTCTTTTCGAAACAAGAAAACACAAC
ATATGCCATTTTAGCTTTTGTGTGTATACTCTGTTTTATTGCAATGTTCT
CAATCGGATGGGGCCCGTTGCCATGGTTACTCATGTCTGAATTATTCCCA
ATCAAGACAAGAGGTATTGCAACTACAATTGTCACTTTATCAAACTGGTT
ATTTGTGTTTACAACGACTTCATCTTTCTGTTTTCTCGTGAATAAAATTC
ATATTTATGGTGCCATGTGGATCTTTGCAACAATTGTATTTATTGGTTTC
TTCTTTACCCTGTTTTTTGTACCGGAAACCCGGGGTCGCCCACTTGAAGA
AGTAGCAGAACTTTTTATTAGACGGAAGGTGTTGCAGGTCAGCATTCTGT
GGACCAGACATGATGCGTCAATGTAATCACCTATCAATTTGTTGGCAATG
ACTGACTGATCACCACATTAATAAATTGGAAAACAATTTccatttttaat
gatttttaattttttttgcacaacACACCTCTTATGCTGAAAGTtacacc
cccttttcacagacccggtaggattttttcagccagtgggaataaaataa
cggactgaaactttatggggattgatatttccatatttttcatggctggg
tatttcaattcttttgttttcaagtcagaaaattcagtgagcatggaaaa
tagcataataatttgcagtgaggattggtttatctGATTACTTTCAGTGT
GGACAAAAATGGGCGGCTAATTTTCCATCGGAGACGGTATTTTGGCTAGT
TTTTCTAGTGGGAAGGGGTCTCAatgagtctgtgagaagggggtgtaaag
ttgttctttcttttcttttgtgaaATGATGTTCTTgatgttgttgttgaa
attagtgttttgttttgattatttaaaTACATTTGATAGTTgacaattat
tttttcaatcatttttaaaataatcttaATTTATGTATTATGACCTTAGA
ATCTAAATTAAACCAATGAATACAAGAGTAAATcacttttattttcagtt
tttgtatttGCAATGTATCTTTGAATGATTTGTGATGTTACAATGTTACA
ATTTCTATATAGGTTGCTATATATCTTTTTTACATATT
Run BLAST on NCBI

protein sequence of TCONS_00055011-protein

>TCONS_00055011-protein ID=TCONS_00055011-protein|Name=TCONS_00055011-protein|organism=Clytia hemisphaerica|type=polypeptide|length=491bp
MASARGDIFVQNDSAFEGKNNKDKMWTACFAAFSAALATVNFGYALGFTA
EAELSEQFNSNNSAIDLSMLNGNSSKGFSMCDPDFDIFASVVALGALVGG
LLAGILIDKIGRKTTIISTTIFYFLGWVLIANSYCYYGKHGGIGDPEFCR
KHSKQWYYSMLYCGRVITGIGVGMSSLVVPVYIAEIASARMRGALGNINQ
LSINFGFVVAYLTGYKQNLPTTAYVPIGISILNLILMVFFLPETPRYLLA
NNRRHDAILALYWLRGQDYPVEEECFEIEGHVNFGTQEQWQWKDLKSSTF
YWPLIIALFLMFFQEFSVDRFGRRKLLLSGSVGMFISLILVSVYVHSYPV
YYNNVDDISNFFSKQENTTYAILAFVCILCFIAMFSIGWGPLPWLLMSEL
FPIKTRGIATTIVTLSNWLFVFTTTSSFCFLVNKXXXXXXSIETWRYTYI
GYFDERLRRICNICVFHTVHFHRNFLLFSGPVWTPKTPLIR
Run BLAST on NCBI

transcript from alignment at scaffold_248:329907..339433+

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00055011 ID=TCONS_00055011|Name=TCONS_00055011|organism=Clytia hemisphaerica|type=transcript|length=9527bp|location=Sequence derived from alignment at scaffold_248:329907..339433+ (Clytia hemisphaerica)
ATAACAATTTGCGCTCTGTTTCCGTTTTTCTTATTGTATTTCTCACTTAT
ATCTTTAGGTGCgtaattatgaaaaatagatgaataaaaataaatagaCA
GATATGACCGTTCCAACCTGATTTATCCTGAGGTATCTGGAAAGTATTAG
CAAGGACATTATGGCATCAGCTCGGGGTGATATTTTCGTGCAGAATGATT
CAGCTTTTGAGGgtaaaaacaacaaagacaaaatgtGGACAGCATGTTTT
GCTGCATTTTCCGCTGCCCTGGCTACTGTAAATTTTGGATATGCTCTTGG
ATTCACAGCAGAAGCAGAATTATCTGAACAATTCAATTCAAACAACTCTG
CTATTGATTTGTCAATGTTGAATGGGAATTCATCCAAAGGTTTCTCTATG
TGTGATcctgattttgatatttttgcgGTAAGTCATAACGTTCAGAGAGG
TTTCTATCCCTCTCTTAAAATGTACTCTCCCTAATTCTGAGAAGGAATAA
GTAAGTTTACACAAGAGTAGGATGAGCTAGATTCGAACGTTCTAGAGGAT
ACTGATTTCACCTCTGTTTTTGAGGTCTTGTAAATTACTAGGAATTGCAA
ATAATGTTTCTAATATCCTTTTTATTTCAAGTCAGTTGTGGCACTAGGCG
CTCTAGTTGGTGGTCTCTTGGCTGGCATACTGATTGATAAGATTGGACGG
AAAACTACCATTATCTCAACAactattttctactttcttgGATGGGTTCT
CATTGCAAACAGTTATTGTTATTATGGTAAGCACGGAGGCATTGGTGATC
CAGAATTTTGTCGAAAACACTCAAAACAATGGTATTATAGCATGCTGTAT
TGTGGACGTGTTATTACTGGAATTGGTGTGGGTATGAGCTCGCTTGTGGT
GCCTGTATGAGTCTTATTTTAATTAGTTATTTCATTATTCTTGGCTAATA
TTGAAAAATGATTGTTCTGATATAAGAAGGATCATAATTATTGTAAAATT
GAAGaaacaaaatatgaaaagaCCCTCATTAATACTTATCAATGGACTGA
ATAGGTTCTTACATTTTATTAACCATTCGTTTTACGTTACATGTTCAGGT
GTACATTGCGGAAATTGCATCAGCGCGCATGCGTGGAGCACTTGGAAACA
TCAATCAGTTGTCAATCAATTTTGGATTTGTTGTAGCCTACATGACAGGA
TACAAACAAAATCTTCCCACAACAGGTTTAAATTTTAATATACCATATTT
CCTCTTTTTAACACCACCTTCTAAAAAGTAAGGCACTTAAGAGTGCATTC
AGCGAGTTTAAGtaatttataaatttggtaaACTGATTTTTGTGAACAAG
CTGTTATCTGTTGAATATTTTAGCCAGAAAAAGCTGAGAATGAAACACAA
GAGGgaatttttgagcaaaatatttgGGACTGCTGGTACTTTTAttgttt
gatttttaaccctaaGCTTTTTGAATAGGTCTAACTAAGGAAATAATTTA
AATTAatgaataataatttttttacaaattatctTCATTTTTTGCAGCTT
ACGTACCAATCGGAANCAGCATAATTTTCATTCTTACAATTTATTTTAAC
TGAACCAGATTCCAAATTATATTCACAACAGCTTACGTACCAATCGGAAT
CTCAATTCTCAACCTTATTCTGATGGTTTTCTTCTTACCTGAGACACCGC
GATATCTTTTGGCAAACAACAGACGACATGATGCCATCCTCGCATTGTAT
TGGTTAAGAGGTCCAGACTATCCAGTGGAAGaggaatgttttgaaattga
aggCCATGTTAATTTTGGTATGTGTTACTTCTACTAAAAAAAGGGTAGGA
GGTTTATCTTTTGACAAAATGTATAGCTCATTCATTTTGCATGAAAATAA
CACTGCTAGCTGATGCAATTTAATGACTTTGAGGTTTTTGGAGGTTAGTT
ATTTTCAGTTCCTACTTCATATTTCATCCACTATCCTTTCTTTCTTATTA
GGCACCCAAGATCAATGGCAATGGAAGGATCTGAAAAGTTCCACATTCTA
CTGGCCGCTTTTCATTGCacttagtttaatgttttttcaAGAATTCAGTG
GTATAAATTGTATCTTATTTTACTGTTCTTCCATCTTTCTTGCATCTGGG
ATAGGTGCACGAGTAAAACCTGAAGATCTAGTTAACTCTAAGAAGATACT
GGAAGCTTTAAAGAATGACTCCAAATTGTATGCCTTGTTTGTCTGCTCAa
cacttttcatttttactgGAATATCTTGCTTCCTAGTGGACCGATATGGA
CGCCGGAAACTCCTCCTATCCGGTAGTGTGGGAATGTTTATCTCACTGAT
ACCAGTCAGTGTGTATGTTTATCACTACCAATTCAACATGAAGCAAATAA
TTGATTTCTtatcaaaacaagaaaacacaACATATGCCATTTTAGCTTTG
GTGTGTATACTCAGTTTTATTGCAATGTTCTCAATTGGATGGGGTCCGCT
GCCATGGTTACTCATGTCTGAATTATTCCCAATCAAGACAAGAGGTATTG
CAACTGCCATTGTCACTTTCTCAAACTGGTTATTTGTGTTTACAACGACT
TCATCTTTCTGTAAAGTCATTTATGGAATCCATATTTATGGTACACTATG
GACTTTTGCAATCATTGTAGTTATGGGTTTCTTTTTCACGCTGTTTTTTG
TCCCTGAAACTCAAGGTCGACCACTGGAAGAAGTAGCAGAACTTTTTATA
AGACGGAATTTGCTGCAGGTCAGCATTCCATGGACCAGACACGATGCAtt
ataatcaatttttttttaagttgctTGAAGTTGCAGACAAATCCTtacaa
taattcaaaaatttgatacAGGATACACTGCTTCAACTTTACCGTCCTAT
CtaaaagacaaaatattttttaacaaagattTTCGTACTGAAAACATGCC
TTAAGGGAAGAAGATTTGTAAACTCTAGTCAAAATTGAAAGATTCTTTCA
AGACGAACAAAAGAAGATTGCCCAAAAATTCTTTGATTTGAATaagaaat
ctaaatttttgaattaatatttttcaaagatgtTTTTGTAAATCATATAT
TTTGTGTTCTTTTGAAGATTACTTGTttattttaatatctttttataaga
ttctttttttattgaaattttgtaacattttacattaaatttgaattatt
atAGTATAGTCCTGACAAAGGTAATGGTTTATTTAAAAGAACAACAATGA
AATCAAGACCTGGTTGAAAATTAAGTATCCCCCCTTATTTGACAAACAAA
GAAGTCTTTTTAGAGTAAAGATTAACACTAAGATTAACAATTtacctttc
aaaaaaaattaatatttttgggGGATTATTTTCCTGGTAGGCTCTTAACA
CACCTgccttttaaaatttcatttttctaacgTTTTTCTActctttttac
atttttccaGATAAACCAATACAAatacgaaaattaaaaaagactgACAA
GATGCTCCCAATAATATGACTTCTTCCATCAGTATTTAGACATTGGGAAC
TGGCACTAAGAGGTCAACCTTAAAGAAAAGTTATTACAATAATGGCATCA
GCTCGCGGTGATATTTTCATACAAAATGATTCAGCTTTTGAGGGTAAAAA
CAACAAGGACAAAATGTGGACAGCATGTTTTGCTGCATTTTCTGCTGCCC
TGGCTACTGTAAATTTTGGATATGCTCTTGGATTCACAGCAGAAGCAGAA
TTATTGCTACAGTTTAATCcaaattttaatgtaaattcaACAAAAAGATT
TGCAGGGTGTACTGAagatttcgatttctttgcaGTAAGTAACATTGCAT
TAACAACAGCAGGTAGTTGGTCCATTTTTTCTTCGATTAAAAATAACAAC
CTCTTCAATGCAAGTttagttttttggacctaccccggtggggtggaggt
cctataaattaacctgtgtttgtttgtccgttcgttcgtctgttaccaac
ttttctcaggattgaatcataggaatcttttgatttttggtacaaaggtg
caaaatggtggtgggcaAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNGAACCGACACAAACCTGTGAAAACCATTCTCTAAACTATTATTTG
AGTATGGTGTACACTGGACGAGTGATAACTGGCGTTGGAGCTGGGATGAG
CTCCTTAGTTGTGCCTGTAGGTTTTCTCTTACAATAACACAAATAGCTCT
ATATCTGATAAGAAGTAGGCCCAGAACCGTCCGTTAGGGTTACCAAGATT
TAAGATTATTTAGTAtttgttgacccccccccctcctcaattaatatttt
tttaattaaaccTTACTTCGTTATGATATGTACTTCAATATGTATCTGAT
TATGTACACAAGCATGAATACCAATCCTTGCCAATCAGATCACTTTTGAT
ATTTGACAGTATTtccttttgacttttttcaaactccaaATTAAACCACT
TCGTTGAATCAAGGTTGATAGGTGTATGAGATTTAGTcacttttaatatt
tttatccccataaTTGATCTCCAaagttttctttattaaaatatcacaaa
agattttttctttactCCATGTTCAGGTGTACATTGCGGAAATTGCATCA
GCGCGCATGCGTGGAGCACTTGGAAACATCAATCAGTTGTCAATCAATTT
TGGATTTGTTGTAGCCTATTTGACAGGATACAAACAAAATCTTCCAACAA
CAGGTTTTGTACTATTGCCATCATATTATCAATAACATATTATATAGGGA
AGTCAAGATCTTATATATTTACAGCTGAGGTCTAGTTATGCCTGTTGAAT
TATGTCTACCAAACATAATACTCAGTTCAAACTGGAGGTCAAGGAAATGT
AACTTTTGCATACTTTACCTTTCAGCATAATTTTCATTCTTACAATTTAT
TTTAACTGAACCAGATTCCAAATTATATTCACAACAGCTTACGTACCAAT
CGGAATCTCAATTCTCAACCTTATTCTGATGGTTTTCTTCTTACCTGAGA
CACCGCGATATCTTTTGGCAAACAACAGACGACATGATGCCATCCTTGCG
TTGTATTGGCTAAGAGGTCAAGACTATCCAGTGGAAGaggaatgttttga
aattgaaggCCATgttaattttggtattttttcacttttgcttttatTAT
TCACTTTATTAACCACTCAACTTGAAGAaaggattttgtttttttcctca
AAGAGTTCTTTGATATCAACTTTTCTCCAATTTTAGGCTAAGGGTTTTTT
CTTAGACTACaatcccttctcacagacccagtgagatttttttcagccat
ttgGGCTAAAAACAACGAACCAAAAATTGATGGGATtgattttcctattt
ttctaatggctggggatttgaattcgaTTGTTTGCGAGCCAGAGatctca
gtggggatagaaaaagtagcataatattttgtacTAAGGATTTGCTtaac
actcttttttttataagcaaacgGGAAATTCAGGTCAAGGCTCAAcatgc
ttagcaaaatctcattttcagccttaatttatgcttatttatcTGCTTAG
ACttcgattttttgattttctttgggtttaagaaaattttgtatttttaa
gtgGGAATTGATTCAGCTCAAAGAATGAAAGTTTTATCTAAAATTTGACA
CTGCAGGTGAAAATCTTTGGTCCAAGAAAGCTCAAGCAGCTTTAAAAGCa
accctaaaaaggtcagcgCTTTAGAAAAACTGCactaatttttgcatttc
agcttggaggtatgcttGGAATTATGCTTATTTTCAACGGGGACAAAANC
TCAAGCAGCTTTAAAAGCaaccctaaaaaggtcagcgCTTTAGAAAAACT
GCactaatttttgcatttcagattagagtataattttccactggggacga
tattttggccaatttttcaggTGGGAAGgtgtcccagtgggtctgtgaga
aaggggtgtttagACTTTGGTAAAACATTTAGTACTTTTAGAGTGGTTAA
CCTTAAcattaaatgaatattttttcagGAACTCAAGAGCAATGGCAATG
GAAGGATCTGAAAAGTTCCACATTCTACTGGCCGCTCATCATTgcacttt
ttttgatgtttttccaAGAATTCAGTGGTATAAATTGTATCTTATTTTAC
TGCacctcaattttttttgcttctgGGATTGGTGCTCAATTGAAACCTGG
AGATACCCATATATTGGATACTTTGACAAAAGGCTCAGAAGAATATGCAA
TATATGTGTGTTTCACACTGTTCATTTTCACCGGAATTTCCTGCTTTTTA
GTGGACCGGTTTGGACGCCGAAAACTCCTCTTATCCGGTAGTGTTGGAAT
GTTTATCTCACTAATTCTAGTAAGTGTGTACGTCCACTCTTATCCTGTTT
ATTATAATAATGTTGATGACATTTCTAATTTCTTTTCGAAACAAGAAAAC
ACAACATATGCCATTTTAGCTTTTGTGTGTATACTCTGTTTTATTGCAAT
GTTCTCAATCGGATGGGGCCCGTTGCCATGGTTACTCATGTCTGAATTAT
TCCCAATCAAGACAAGAGGTATTGCAACTACAATTGTCACTTTATCAAAC
TGGTTATTTGTGTTTACAACGACTTCATCTTTCTGTTTTCTCGTGAATAA
AATNNNNNNNNNNNNNNGCTCAATTGAAACCTGGAGATACACATATATTG
GATACTTTGACGAAAGGCTCAGAAGAATATGCAATATATGTGTGTTTCAC
ACTGTTCATTTTCACCGGAATTTCCTGCTTTTTAGTGGACCGGTTTGGAC
GCCGAAAACTCCTCTTATCCGGTAGTGTTGGAATGTTTATCTCACTAATT
CTAGTAAGTGTGTACGTCCACTCTTATCCTGTTTATTATAATAATGTTGA
TGACATTTCTAATTTCTTTTCGAAACAAGAAAACACAACATATGCCATTT
TAGCTTTTGTGTGTATACTCTGTTTTATTGCAATGTTCTCAATCGGATGG
GGCCCGTTGCCATGGTTACTCATGTCTGAATTATTCCCAATCAAGACAAG
AGGTATTGCAACTACAATTGTCACTTTATCAAACTGGTTATTTGTGTTTA
CAACGACTTCATCTTTCTGTTTTCTCGTGAATAAAATTCATATTTATGGT
GCCATGTGGATCTTTGCAACAATTGTATTTATTGGTTTCTTCTTTACCCT
GTTTTTTGTACCGGAAACCCGGGGTCGCCCACTTGAAGAAGTAGCAGAAC
TTTTTATTAGACGGAAGGTGTTGCAGGTCAGCATTCTGTGGACCAGACAT
GATGCGTCAATGTAATCACCTATCAATTTGTTGGCAATGACTGACTGATC
ACCACATTAATAAATTGGAAAACAATTTccatttttaatgatttttaatt
ttttttgcacaacACACCTCTTATGCTGAAAGTtacacccccttttcaca
gacccggtaggattttttcagccagtgggaataaaataacggactgaaac
tttatggggattgatatttccatatttttcatggctgggtatttcaattc
ttttgttttcaagtcagaaaattcagtgagcatggaaaatagcataataa
tttgcagtgaggattggtttatctGATTACTTTCAGTGTGGACAAAAATG
GGCGGCTAATTTTCCATCGGAGACGGTATTTTGGCTAGTTTTTCTAGTGG
GAAGGGGTCTCAatgagtctgtgagaagggggtgtaaagttgttctttct
tttcttttgtgaaATGATGTTCTTgatgttgttgttgaaattagtgtttt
gttttgattatttaaaTACATTTGATAGTTgacaattattttttcaatca
tttttaaaataatcttaATTTATGTATTATGACCTTAGAATCTAAATTAA
ACCAATGAATACAAGAGTAAATcacttttattttcagtttttgtatttGC
AATGTATCTTTGAATGATTTGTGATGTTACAATGTTACAATTTCTATATA
GGTTGCTATATATCTTTTTTACATATT

Coding sequence (CDS) from alignment at scaffold_248:329907..339433+

>TCONS_00055011 ID=TCONS_00055011|Name=TCONS_00055011|organism=Clytia hemisphaerica|type=CDS|length=8856bp|location=Sequence derived from alignment at scaffold_248:329907..339433+ (Clytia hemisphaerica)
ATGGCATCAGCTCGGGGTGATATTTTCGTGCAGAATGATTCAGCTTTTGA
GGgtaaaaacaacaaagacaaaatgtGGACAGCATGTTTTGCTGCATTTT
CCGCTGCCCTGGCTACTGTAAATTTTGGATATGCTCTTGGATTCACAGCA
GAAGCAGAATTATCTGAACAATTCAATTCAAACAACTCTGCTATTGATTT
GTCAATGTTGAATGGGAATTCATCCAAAGGTTTCTCTATGTGTGATcctg
attttgatatttttgcgTCAGTTGTGGCACTAGGCGCTCTAGTTGGTGGT
CTCTTGGCTGGCATACTGATTGATAAGATTGGACGGAAAACTACCATTAT
CTCAACAactattttctactttcttgGATGGGTTCTCATTGCAAACAGTT
ATTGTTATTATGGTAAGCACGGAGGCATTGGTGATCCAGAATTTTGTCGA
AAACACTCAAAACAATGGTATTATAGCATGCTGTATTGTGGACGTGTTAT
TACTGGAATTGGTGTGGGTATGAGCTCGCTTGTGGTGCCTGTGTACATTG
CGGAAATTGCATCAGCGCGCATGCGTGGAGCACTTGGAAACATCAATCAG
TTGTCAATCAATTTTGGATTTGTTGTAGCCTATTTGACAGGATACAAACA
AAATCTTCCAACAACAGCTTACGTACCAATCGGAATCTCAATTCTCAACC
TTATTCTGATGGTTTTCTTCTTACCTGAGACACCGCGATATCTTTTGGCA
AACAACAGACGACATGATGCCATCCTTGCGTTGTATTGGCTAAGAGGTCA
AGACTATCCAGTGGAAGaggaatgttttgaaattgaaggCCATgttaatt
ttgGAACTCAAGAGCAATGGCAATGGAAGGATCTGAAAAGTTCCACATTC
TACTGGCCGCTCATCATTgcactttttttgatgtttttccaAGAATTCAG
TGTGGACCGGTTTGGACGCCGAAAACTCCTCTTATCCGGTAGTGTTGGAA
TGTTTATCTCACTAATTCTAGTAAGTGTGTACGTCCACTCTTATCCTGTT
TATTATAATAATGTTGATGACATTTCTAATTTCTTTTCGAAACAAGAAAA
CACAACATATGCCATTTTAGCTTTTGTGTGTATACTCTGTTTTATTGCAA
TGTTCTCAATCGGATGGGGCCCGTTGCCATGGTTACTCATGTCTGAATTA
TTCCCAATCAAGACAAGAGGTATTGCAACTACAATTGTCACTTTATCAAA
CTGGTTATTTGTGTTTACAACGACTTCATCTTTCTGTTTTCTCGTGAATA
AAATNNNNNNNNNNNNNNGCTCAATTGAAACCTGGAGATACACATATATT
GGATACTTTGACGAAAGGCTCAGAAGAATATGCAATATATGTGTGTTTCA
CACTGTTCATTTTCACCGGAATTTCCTGCTTTTTAGTGGACCGGTTTGGA
CGCCGAAAACTCCTCTTATCCGGTAGATGGCATCAGCTCGGGGTGATATT
TTCGTGCAGAATGATTCAGCTTTTGAGGgtaaaaacaacaaagacaaaat
gtGGACAGCATGTTTTGCTGCATTTTCCGCTGCCCTGGCTACTGTAAATT
TTGGATATGCTCTTGGATTCACAGCAGAAGCAGAATTATCTGAACAATTC
AATTCAAACAACTCTGCTATTGATTTGTCAATGTTGAATGGGAATTCATC
CAAAGGTTTCTCTATGTGTGATcctgattttgatatttttgcgTCAGTTG
TGGCACTAGGCGCTCTAGTTGGTGGTCTCTTGGCTGGCATACTGATTGAT
AAGATTGGACGGAAAACTACCATTATCTCAACAactattttctactttct
tgGATGGGTTCTCATTGCAAACAGTTATTGTTATTATGGTAAGCACGGAG
GCATTGGTGATCCAGAATTTTGTCGAAAACACTCAAAACAATGGTATTAT
AGCATGCTGTATTGTGGACGTGTTATTACTGGAATTGGTGTGGGTATGAG
CTCGCTTGTGGTGCCTGTGTACATTGCGGAAATTGCATCAGCGCGCATGC
GTGGAGCACTTGGAAACATCAATCAGTTGTCAATCAATTTTGGATTTGTT
GTAGCCTATTTGACAGGATACAAACAAAATCTTCCAACAACAGCTTACGT
ACCAATCGGAATCTCAATTCTCAACCTTATTCTGATGGTTTTCTTCTTAC
CTGAGACACCGCGATATCTTTTGGCAAACAACAGACGACATGATGCCATC
CTTGCGTTGTATTGGCTAAGAGGTCAAGACTATCCAGTGGAAGaggaatg
ttttgaaattgaaggCCATgttaattttgGAACTCAAGAGCAATGGCAAT
GGAAGGATCTGAAAAGTTCCACATTCTACTGGCCGCTCATCATTgcactt
tttttgatgtttttccaAGAATTCAGTGTGGACCGGTTTGGACGCCGAAA
ACTCCTCTTATCCGGTAGTGTTGGAATGTTTATCTCACTAATTCTAGTAA
GTGTGTACGTCCACTCTTATCCTGTTTATTATAATAATGTTGATGACATT
TCTAATTTCTTTTCGAAACAAGAAAACACAACATATGCCATTTTAGCTTT
TGTGTGTATACTCTGTTTTATTGCAATGTTCTCAATCGGATGGGGCCCGT
TGCCATGGTTACTCATGTCTGAATTATTCCCAATCAAGACAAGAGGTATT
GCAACTACAATTGTCACTTTATCAAACTGGTTATTTGTGTTTACAACGAC
TTCATCTTTCTGTTTTCTCGTGAATAAAATNNNNNNNNNNNNNNGCTCAA
TTGAAACCTGGAGATACACATATATTGGATACTTTGACGAAAGGCTCAGA
AGAATATGCAATATATGTGTGTTTCACACTGTTCATTTTCACCGGAATTT
CCTGCTTTTTAGTGGACCGGTTTGGACGCCGAAAACTCCTCTTATCCGGT
AGATGGCATCAGCTCGGGGTGATATTTTCGTGCAGAATGATTCAGCTTTT
GAGGgtaaaaacaacaaagacaaaatgtGGACAGCATGTTTTGCTGCATT
TTCCGCTGCCCTGGCTACTGTAAATTTTGGATATGCTCTTGGATTCACAG
CAGAAGCAGAATTATCTGAACAATTCAATTCAAACAACTCTGCTATTGAT
TTGTCAATGTTGAATGGGAATTCATCCAAAGGTTTCTCTATGTGTGATcc
tgattttgatatttttgcgTCAGTTGTGGCACTAGGCGCTCTAGTTGGTG
GTCTCTTGGCTGGCATACTGATTGATAAGATTGGACGGAAAACTACCATT
ATCTCAACAactattttctactttcttgGATGGGTTCTCATTGCAAACAG
TTATTGTTATTATGGTAAGCACGGAGGCATTGGTGATCCAGAATTTTGTC
GAAAACACTCAAAACAATGGTATTATAGCATGCTGTATTGTGGACGTGTT
ATTACTGGAATTGGTGTGGGTATGAGCTCGCTTGTGGTGCCTGTGTACAT
TGCGGAAATTGCATCAGCGCGCATGCGTGGAGCACTTGGAAACATCAATC
AGTTGTCAATCAATTTTGGATTTGTTGTAGCCTATTTGACAGGATACAAA
CAAAATCTTCCAACAACAGCTTACGTACCAATCGGAATCTCAATTCTCAA
CCTTATTCTGATGGTTTTCTTCTTACCTGAGACACCGCGATATCTTTTGG
CAAACAACAGACGACATGATGCCATCCTTGCGTTGTATTGGCTAAGAGGT
CAAGACTATCCAGTGGAAGaggaatgttttgaaattgaaggCCATgttaa
ttttgGAACTCAAGAGCAATGGCAATGGAAGGATCTGAAAAGTTCCACAT
TCTACTGGCCGCTCATCATTgcactttttttgatgtttttccaAGAATTC
AGTGTGGACCGGTTTGGACGCCGAAAACTCCTCTTATCCGGTAGTGTTGG
AATGTTTATCTCACTAATTCTAGTAAGTGTGTACGTCCACTCTTATCCTG
TTTATTATAATAATGTTGATGACATTTCTAATTTCTTTTCGAAACAAGAA
AACACAACATATGCCATTTTAGCTTTTGTGTGTATACTCTGTTTTATTGC
AATGTTCTCAATCGGATGGGGCCCGTTGCCATGGTTACTCATGTCTGAAT
TATTCCCAATCAAGACAAGAGGTATTGCAACTACAATTGTCACTTTATCA
AACTGGTTATTTGTGTTTACAACGACTTCATCTTTCTGTTTTCTCGTGAA
TAAAATNNNNNNNNNNNNNNGCTCAATTGAAACCTGGAGATACACATATA
TTGGATACTTTGACGAAAGGCTCAGAAGAATATGCAATATATGTGTGTTT
CACACTGTTCATTTTCACCGGAATTTCCTGCTTTTTAGTGGACCGGTTTG
GACGCCGAAAACTCCTCTTATCCGGTAGATGGCATCAGCTCGGGGTGATA
TTTTCGTGCAGAATGATTCAGCTTTTGAGGgtaaaaacaacaaagacaaa
atgtGGACAGCATGTTTTGCTGCATTTTCCGCTGCCCTGGCTACTGTAAA
TTTTGGATATGCTCTTGGATTCACAGCAGAAGCAGAATTATCTGAACAAT
TCAATTCAAACAACTCTGCTATTGATTTGTCAATGTTGAATGGGAATTCA
TCCAAAGGTTTCTCTATGTGTGATcctgattttgatatttttgcgTCAGT
TGTGGCACTAGGCGCTCTAGTTGGTGGTCTCTTGGCTGGCATACTGATTG
ATAAGATTGGACGGAAAACTACCATTATCTCAACAactattttctacttt
cttgGATGGGTTCTCATTGCAAACAGTTATTGTTATTATGGTAAGCACGG
AGGCATTGGTGATCCAGAATTTTGTCGAAAACACTCAAAACAATGGTATT
ATAGCATGCTGTATTGTGGACGTGTTATTACTGGAATTGGTGTGGGTATG
AGCTCGCTTGTGGTGCCTGTGTACATTGCGGAAATTGCATCAGCGCGCAT
GCGTGGAGCACTTGGAAACATCAATCAGTTGTCAATCAATTTTGGATTTG
TTGTAGCCTATTTGACAGGATACAAACAAAATCTTCCAACAACAGCTTAC
GTACCAATCGGAATCTCAATTCTCAACCTTATTCTGATGGTTTTCTTCTT
ACCTGAGACACCGCGATATCTTTTGGCAAACAACAGACGACATGATGCCA
TCCTTGCGTTGTATTGGCTAAGAGGTCAAGACTATCCAGTGGAAGaggaa
tgttttgaaattgaaggCCATgttaattttgGAACTCAAGAGCAATGGCA
ATGGAAGGATCTGAAAAGTTCCACATTCTACTGGCCGCTCATCATTgcac
tttttttgatgtttttccaAGAATTCAGTGTGGACCGGTTTGGACGCCGA
AAACTCCTCTTATCCGGTAGTGTTGGAATGTTTATCTCACTAATTCTAGT
AAGTGTGTACGTCCACTCTTATCCTGTTTATTATAATAATGTTGATGACA
TTTCTAATTTCTTTTCGAAACAAGAAAACACAACATATGCCATTTTAGCT
TTTGTGTGTATACTCTGTTTTATTGCAATGTTCTCAATCGGATGGGGCCC
GTTGCCATGGTTACTCATGTCTGAATTATTCCCAATCAAGACAAGAGGTA
TTGCAACTACAATTGTCACTTTATCAAACTGGTTATTTGTGTTTACAACG
ACTTCATCTTTCTGTTTTCTCGTGAATAAAATNNNNNNNNNNNNNNGCTC
AATTGAAACCTGGAGATACACATATATTGGATACTTTGACGAAAGGCTCA
GAAGAATATGCAATATATGTGTGTTTCACACTGTTCATTTTCACCGGAAT
TTCCTGCTTTTTAGTGGACCGGTTTGGACGCCGAAAACTCCTCTTATCCG
GTAGATGGCATCAGCTCGGGGTGATATTTTCGTGCAGAATGATTCAGCTT
TTGAGGgtaaaaacaacaaagacaaaatgtGGACAGCATGTTTTGCTGCA
TTTTCCGCTGCCCTGGCTACTGTAAATTTTGGATATGCTCTTGGATTCAC
AGCAGAAGCAGAATTATCTGAACAATTCAATTCAAACAACTCTGCTATTG
ATTTGTCAATGTTGAATGGGAATTCATCCAAAGGTTTCTCTATGTGTGAT
cctgattttgatatttttgcgTCAGTTGTGGCACTAGGCGCTCTAGTTGG
TGGTCTCTTGGCTGGCATACTGATTGATAAGATTGGACGGAAAACTACCA
TTATCTCAACAactattttctactttcttgGATGGGTTCTCATTGCAAAC
AGTTATTGTTATTATGGTAAGCACGGAGGCATTGGTGATCCAGAATTTTG
TCGAAAACACTCAAAACAATGGTATTATAGCATGCTGTATTGTGGACGTG
TTATTACTGGAATTGGTGTGGGTATGAGCTCGCTTGTGGTGCCTGTGTAC
ATTGCGGAAATTGCATCAGCGCGCATGCGTGGAGCACTTGGAAACATCAA
TCAGTTGTCAATCAATTTTGGATTTGTTGTAGCCTATTTGACAGGATACA
AACAAAATCTTCCAACAACAGCTTACGTACCAATCGGAATCTCAATTCTC
AACCTTATTCTGATGGTTTTCTTCTTACCTGAGACACCGCGATATCTTTT
GGCAAACAACAGACGACATGATGCCATCCTTGCGTTGTATTGGCTAAGAG
GTCAAGACTATCCAGTGGAAGaggaatgttttgaaattgaaggCCATgtt
aattttgGAACTCAAGAGCAATGGCAATGGAAGGATCTGAAAAGTTCCAC
ATTCTACTGGCCGCTCATCATTgcactttttttgatgtttttccaAGAAT
TCAGTGTGGACCGGTTTGGACGCCGAAAACTCCTCTTATCCGGTAGTGTT
GGAATGTTTATCTCACTAATTCTAGTAAGTGTGTACGTCCACTCTTATCC
TGTTTATTATAATAATGTTGATGACATTTCTAATTTCTTTTCGAAACAAG
AAAACACAACATATGCCATTTTAGCTTTTGTGTGTATACTCTGTTTTATT
GCAATGTTCTCAATCGGATGGGGCCCGTTGCCATGGTTACTCATGTCTGA
ATTATTCCCAATCAAGACAAGAGGTATTGCAACTACAATTGTCACTTTAT
CAAACTGGTTATTTGTGTTTACAACGACTTCATCTTTCTGTTTTCTCGTG
AATAAAATNNNNNNNNNNNNNNGCTCAATTGAAACCTGGAGATACACATA
TATTGGATACTTTGACGAAAGGCTCAGAAGAATATGCAATATATGTGTGT
TTCACACTGTTCATTTTCACCGGAATTTCCTGCTTTTTAGTGGACCGGTT
TGGACGCCGAAAACTCCTCTTATCCGGTAGATGGCATCAGCTCGGGGTGA
TATTTTCGTGCAGAATGATTCAGCTTTTGAGGgtaaaaacaacaaagaca
aaatgtGGACAGCATGTTTTGCTGCATTTTCCGCTGCCCTGGCTACTGTA
AATTTTGGATATGCTCTTGGATTCACAGCAGAAGCAGAATTATCTGAACA
ATTCAATTCAAACAACTCTGCTATTGATTTGTCAATGTTGAATGGGAATT
CATCCAAAGGTTTCTCTATGTGTGATcctgattttgatatttttgcgTCA
GTTGTGGCACTAGGCGCTCTAGTTGGTGGTCTCTTGGCTGGCATACTGAT
TGATAAGATTGGACGGAAAACTACCATTATCTCAACAactattttctact
ttcttgGATGGGTTCTCATTGCAAACAGTTATTGTTATTATGGTAAGCAC
GGAGGCATTGGTGATCCAGAATTTTGTCGAAAACACTCAAAACAATGGTA
TTATAGCATGCTGTATTGTGGACGTGTTATTACTGGAATTGGTGTGGGTA
TGAGCTCGCTTGTGGTGCCTGTGTACATTGCGGAAATTGCATCAGCGCGC
ATGCGTGGAGCACTTGGAAACATCAATCAGTTGTCAATCAATTTTGGATT
TGTTGTAGCCTATTTGACAGGATACAAACAAAATCTTCCAACAACAGCTT
ACGTACCAATCGGAATCTCAATTCTCAACCTTATTCTGATGGTTTTCTTC
TTACCTGAGACACCGCGATATCTTTTGGCAAACAACAGACGACATGATGC
CATCCTTGCGTTGTATTGGCTAAGAGGTCAAGACTATCCAGTGGAAGagg
aatgttttgaaattgaaggCCATgttaattttgGAACTCAAGAGCAATGG
CAATGGAAGGATCTGAAAAGTTCCACATTCTACTGGCCGCTCATCATTgc
actttttttgatgtttttccaAGAATTCAGTGTGGACCGGTTTGGACGCC
GAAAACTCCTCTTATCCGGTAGTGTTGGAATGTTTATCTCACTAATTCTA
GTAAGTGTGTACGTCCACTCTTATCCTGTTTATTATAATAATGTTGATGA
CATTTCTAATTTCTTTTCGAAACAAGAAAACACAACATATGCCATTTTAG
CTTTTGTGTGTATACTCTGTTTTATTGCAATGTTCTCAATCGGATGGGGC
CCGTTGCCATGGTTACTCATGTCTGAATTATTCCCAATCAAGACAAGAGG
TATTGCAACTACAATTGTCACTTTATCAAACTGGTTATTTGTGTTTACAA
CGACTTCATCTTTCTGTTTTCTCGTGAATAAAATNNNNNNNNNNNNNNGC
TCAATTGAAACCTGGAGATACACATATATTGGATACTTTGACGAAAGGCT
CAGAAGAATATGCAATATATGTGTGTTTCACACTGTTCATTTTCACCGGA
ATTTCCTGCTTTTTAGTGGACCGGTTTGGACGCCGAAAACTCCTCTTATC
CGGTAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034657XLOC_034657Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00055011-proteinTCONS_00055011-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00055011-exon-scaffold_248-1491911889:329907..330333TCONS_00055011-exon-scaffold_248-1491911889:329907..330333Clytia hemisphaericaexon
TCONS_00055011-exon-scaffold_248-1510915933:329907..330333TCONS_00055011-exon-scaffold_248-1510915933:329907..330333Clytia hemisphaericaexon
TCONS_00055011-exon-scaffold_248-1575043694:329907..330333TCONS_00055011-exon-scaffold_248-1575043694:329907..330333Clytia hemisphaericaexon
TCONS_00055011-exon-scaffold_248-1491911889:330538..330810TCONS_00055011-exon-scaffold_248-1491911889:330538..330810Clytia hemisphaericaexon
TCONS_00055011-exon-scaffold_248-1510915933:330538..330810TCONS_00055011-exon-scaffold_248-1510915933:330538..330810Clytia hemisphaericaexon
TCONS_00055011-exon-scaffold_248-1575043694:330538..330810TCONS_00055011-exon-scaffold_248-1575043694:330538..330810Clytia hemisphaericaexon
TCONS_00055011-exon-scaffold_248-1491911889:335983..336109TCONS_00055011-exon-scaffold_248-1491911889:335983..336109Clytia hemisphaericaexon
TCONS_00055011-exon-scaffold_248-1510915933:335983..336109TCONS_00055011-exon-scaffold_248-1510915933:335983..336109Clytia hemisphaericaexon
TCONS_00055011-exon-scaffold_248-1575043694:335983..336109TCONS_00055011-exon-scaffold_248-1575043694:335983..336109Clytia hemisphaericaexon
TCONS_00055011-exon-scaffold_248-1491911889:336344..336529TCONS_00055011-exon-scaffold_248-1491911889:336344..336529Clytia hemisphaericaexon
TCONS_00055011-exon-scaffold_248-1510915933:336344..336529TCONS_00055011-exon-scaffold_248-1510915933:336344..336529Clytia hemisphaericaexon
TCONS_00055011-exon-scaffold_248-1575043694:336344..336529TCONS_00055011-exon-scaffold_248-1575043694:336344..336529Clytia hemisphaericaexon
TCONS_00055011-exon-scaffold_248-1491911889:337435..337533TCONS_00055011-exon-scaffold_248-1491911889:337435..337533Clytia hemisphaericaexon
TCONS_00055011-exon-scaffold_248-1510915933:337435..337533TCONS_00055011-exon-scaffold_248-1510915933:337435..337533Clytia hemisphaericaexon
TCONS_00055011-exon-scaffold_248-1575043694:337435..337533TCONS_00055011-exon-scaffold_248-1575043694:337435..337533Clytia hemisphaericaexon
TCONS_00055011-exon-scaffold_248-1491911889:337708..339433TCONS_00055011-exon-scaffold_248-1491911889:337708..339433Clytia hemisphaericaexon
TCONS_00055011-exon-scaffold_248-1510915933:337708..339433TCONS_00055011-exon-scaffold_248-1510915933:337708..339433Clytia hemisphaericaexon
TCONS_00055011-exon-scaffold_248-1575043694:337708..339433TCONS_00055011-exon-scaffold_248-1575043694:337708..339433Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_248supercontigscaffold_248:329907..339433 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.339976	0.769187	0.515101	0	0.658596	0.62065	0.48022	0.726992	0.63271	0	0	0.18574	0	0	0.150585	0.545169	0.338425	0.111092	0.136979	0.502855	0.595802	2.02626	2.55495	1.97094	1.20259	1.01107	0.861669	0.454127	2.12947	2.10198
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR003663Sugar/inositol_transpt
IPR005828MFS_sugar_transport-like
IPR005829Sugar_transporter_CS
IPR020846MFS_dom
Vocabulary: Molecular Function
TermDefinition
GO:0022891substrate-specific transmembrane transporter activity
GO:0022857transmembrane transporter activity
GO:0005215transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0055085 transmembrane transport
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
molecular_function GO:0022891 substrate-specific transmembrane transporter activity
molecular_function GO:0022857 transmembrane transporter activity
molecular_function GO:0005215 transporter activity
Blast
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BLAST of TCONS_00055011 vs. Swiss-Prot (Human)
Match: GTR8 (Solute carrier family 2, facilitated glucose transporter member 8 OS=Homo sapiens GN=SLC2A8 PE=1 SV=3)

HSP 1 Score: 135.191 bits (339), Expect = 3.387e-33
Identity = 134/444 (30.18%), Postives = 206/444 (46.40%), Query Frame = 2 
Query:  278 VNFGYALGFTAEAELSEQFNSNNSAIDLSMLNGNSSKGFSMCDPDFDIFASXXXXXXXXXXXXXXILIDKIGRKTTIISTTIFYFLGWVLIANSYCYYGKHGGIGDPEFCRKHSKQWYYSMLYCGRVITGIGVGMSSLVVPVYIAEIASARMRGALGNINQLSINFGFVVAYLTGYKQN---LPTTAYVPIGISILNLILMVFFLPETPRYLLANNRRHDAILALYWLRGQDYPVEEECFEIEGHVNFGTQEQWQWKDLKSSTFYWPLIIALFLMFFQEFS------------------------------------------VDRFGRRKLL-LSGSVGMF-ISLILXXXXXXXXXXXXXXXDDISNFFSKQENTTYAILAFVCI--LC-FIAMFSIGWGPLPWLLMSELFPIKTRGIATTIVTLSNWLFVFTTTSSFCFLVN 1459
            ++FG+ALG+++ A  S Q  +  +                + D     F +VV LGA  GG+L G L+D+ GRK +++  ++ +  G+ +I  +   +                      ML  GR++TG+  G++SLV PVYI+EIA   +RG LG+  QL +  G ++AYL G+      L     VP  +    ++L++ F+PETPR+LL  +RR +A+ AL +L G +   E+           G ++ +    L+    Y P II + LM FQ+ S                                          +DR GRR LL LSG V +F  S       +       ++   IS   S Q       LA++ +  +C FIA F++GWGP+PWLLMSE+FP+  +G+AT I  L+NWL  F  T  F  L+ 
Sbjct:   38 LSFGFALGYSSPAIPSLQRAAPPAP--------------RLDDAAASWFGAVVTLGAAAGGVLGGWLVDRAGRKLSLLLCSVPFVAGFAVITAAQDVW----------------------MLLGGRLLTGLACGVASLVAPVYISEIAYPAVRGLLGSCVQLMVVVGILLAYLAGWVLEWRWLAVLGCVPPSL----MLLLMCFMPETPRFLLTQHRRQEAMAALRFLWGSEQGWEDP--------PIGAEQSFHLALLRQPGIYKPFIIGVSLMAFQQLSGVNAVMFYAETIFEEAKFKDSSLASVVVGVIQVLFTAVAALIMDRAGRRLLLVLSGVVMVFSTSAFGAYFKLTQGGPGNSSHVAISAPVSAQPVDASVGLAWLAVGSMCLFIAGFAVGWGPIPWLLMSEIFPLHVKGVATGICVLTNWLMAFLVTKEFSSLME 433

HSP 2 Score: 99.7525 bits (247), Expect = 8.095e-22
Identity = 71/189 (37.57%), Postives = 102/189 (53.97%), Query Frame = 3 
Query: 1524 KGSEEYAIYVCFTLFIFTGISCFLVDRFGRRKLL-LSGSVGMF-ISLILXXXXXXXXXXXXXXXDDISNFFSKQENTTYAILAFVCI--LC-FIAMFSIGWGPLPWLLMSELFPIKTRGIATTIVTLSNWLFVFTTTSSFCFLVNKIHIYGAMWIFAXXXXXXXXXXXXXXPETRGRPLEEVAELFIRR 2075
            K S   ++ V     +FT ++  ++DR GRR LL LSG V +F  S       +       ++   IS   S Q       LA++ +  +C FIA F++GWGP+PWLLMSE+FP+  +G+AT I  L+NWL  F  T  F  L+  +  YGA W+ +        FTLF VPET+G+ LE++   F  R
Sbjct:  289 KDSSLASVVVGVIQVLFTAVAALIMDRAGRRLLLVLSGVVMVFSTSAFGAYFKLTQGGPGNSSHVAISAPVSAQPVDASVGLAWLAVGSMCLFIAGFAVGWGPIPWLLMSEIFPLHVKGVATGICVLTNWLMAFLVTKEFSSLMEVLRPYGAFWLASAFCIFSVLFTLFCVPETKGKTLEQITAHFEGR 477
The following BLAST results are available for this feature:
BLAST of TCONS_00055011 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
GTR83.387e-3330.18Solute carrier family 2, facilitated glucose trans... [more]
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