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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00055015 ID=TCONS_00055015|Name=TCONS_00055015|organism=Clytia hemisphaerica|type=transcript|length=2956bp
AGGTGCgtaattatgaaaaatagatgaataaaaataaatagaCAGATATG
ACCGTTCCAACCTGATTTATCCTGAGGTATCTGGAAAGTATTAGCAAGGA
CATTATGGCATCAGCTCGGGGTGATATTTTCGTGCAGAATGATTCAGCTT
TTGAGGgtaaaaacaacaaagacaaaatgtGGACAGCATGTTTTGCTGCA
TTTTCCGCTGCCCTGGCTACTGTAAATTTTGGATATGCTCTTGGATTCAC
AGCAGAAGCAGAATTATCTGAACAATTCAATTCAAACAACTCTGCTATTG
ATTTGTCAATGTTGAATGGGAATTCATCCAAAGGTTTCTCTATGTGTGAT
cctgattttgatatttttgcgTCAGTTGTGGCACTAGGCGCTCTAGTTGG
TGGTCTCTTGGCTGGCATACTGATTGATAAGATTGGACGGAAAACTACCA
TTATCTCAACAactattttctactttcttgGATGGGTTCTCATTGCAAAC
AGTTATTGTTATTATGGTAAGCACGGAGGCATTGGTGATCCAGAATTTTG
TCGAAAACACTCAAAACAATGGTATTATAGCATGCTGTATTGTGGACGTG
TTATTACTGGAATTGGTGTGGGTATGAGCTCGCTTGTGGTGCCTGTGTAC
ATTGCGGAAATTGCATCAGCGCGCATGCGTGGAGCACTTGGAAACATCAA
TCAGTTGTCAATCAATTTTGGATTTGTTGTAGCCTACATGACAGGATACA
AACAAAATCTTCCCACAACAGCTTACGTACCAATCGGAATCTCAATTCTC
AACCTTATTCTGATGGTTTTCTTCTTACCTGAGACACCGCGATATCTTTT
GGCAAACAACAGACGACATGATGCCATCCTTGCGTTGTATTGGCTAAGAG
GTCAAGACTATCCAGTGGAAGaggaatgttttgaaattgaaggCCATgtt
aattttgGAACTCAAGAGCAATGGCAATGGAAGGATCTGAAAAGTTCCAC
ATTCTACTGGCCGCTCATCATTgcactttttttgatgtttttccaAGAAT
TCAGTGGTATAAATTGTATCTTATTTTACTGCacctcaattttttttgct
tctgGGATTGGTGCTCAATTGAAACCTGGAGATACCCATATATTGGATAC
TTTGACAAAAGGCTCAGAAGAATATGCAATATATGTGTGTTTCACACTGT
TCATTTTCACCGGAATTTCCTGCTTTTTAGTGGACCGGTTTGGACGCCGA
AAACTCCTCTTATCCGGTAGTGTTGGAATGTTTATCTCACTAATTCTAGT
AAGTGTGTACGTCCACTCTTATCCTGTTTATTATAATAATGTTGATGACA
TTTCTAATTTCTTTTCGAAACAAGAAAACACAACATATGCCATTTTAGCT
TTTGTGTGTATACTCTGTTTTATTGCAATGTTCTCAATCGGATGGGGCCC
GTTGCCATGGTTACTCATGTCTGAATTATTCCCAATCAAGACAAGAGGTA
TTGCAACTACAATTGTCACTTTATCAAACTGGTTATTTGTGTTTACAACG
ACTTCATCTTTCTGTTTTCTCGTGAATAAAATNNNNNNNNNNNNNNGCTC
AATTGAAACCTGGAGATACACATATATTGGATACTTTGACGAAAGGCTCA
GAAGAATATGCAATATATGTGTGTTTCACACTGTTCATTTTCACCGGAAT
TTCCTGCTTTTTAGTGGACCGGTTTGGACGCCGAAAACTCCTCTTATCCG
GTAGTGTTGGAATGTTTATCTCACTAATTCTAGTAAGTGTGTACGTCCAC
TCTTATCCTGTTTATTATAATAATGTTGATGACATTTCTAATTTCTTTTC
GAAACAAGAAAACACAACATATGCCATTTTAGCTTTTGTGTGTATACTCT
GTTTTATTGCAATGTTCTCAATCGGATGGGGCCCGTTGCCATGGTTACTC
ATGTCTGAATTATTCCCAATCAAGACAAGAGGTATTGCAACTACAATTGT
CACTTTATCAAACTGGTTATTTGTGTTTACAACGACTTCATCTTTCTGTT
TTCTCGTGAATAAAATTCATATTTATGGTGCCATGTGGATCTTTGCAACA
ATTGTATTTATTGGTTTCTTCTTTACCCTGTTTTTTGTACCGGAAACCCG
GGGTCGCCCACTTGAAGAAGTAGCAGAACTTTTTATTAGACGGAAGGTGT
TGCAGGTCAGCATTCTGTGGACCAGACATGATGCGTCAATGTAATCACCT
ATCAATTTGTTGGCAATGACTGACTGATCACCACATTAATAAATTGGAAA
ACAATTTccatttttaatgatttttaattttttttgcacaacACACCTCT
TATGCTGAAAGTtacacccccttttcacagacccggtaggattttttcag
ccagtgggaataaaataacggactgaaactttatggggattgatatttcc
atatttttcatggctgggtatttcaattcttttgttttcaagtcagaaaa
ttcagtgagcatggaaaatagcataataatttgcagtgaggattggttta
tctGATTACTTTCAGTGTGGACAAAAATGGGCGGCTAATTTTCCATCGGA
GACGGTATTTTGGCTAGTTTTTCTAGTGGGAAGGGGTCTCAatgagtctg
tgagaagggggtgtaaagttgttctttcttttcttttgtgaaATGATGTT
CTTgatgttgttgttgaaattagtgttttgttttgattatttaaaTACAT
TTGATAGTTgacaattattttttcaatcatttttaaaataatcttaATTT
ATGTATTATGACCTTAGAATCTAAATTAAACCAATGAATACAAGAGTAAA
TcacttttattttcagtttttgtatttGCAATGTATCTTTGAATGATTTG
TGATGTTACAATGTTACAATTTCTATATAGGTTGCTATATATCTTTTTTA
CATATT Run BLAST on NCBI transcript from alignment at scaffold_248:329963..339433+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00055015 ID=TCONS_00055015|Name=TCONS_00055015|organism=Clytia hemisphaerica|type=transcript|length=9471bp|location=Sequence derived from alignment at scaffold_248:329963..339433+ (Clytia hemisphaerica)
AGGTGCgtaattatgaaaaatagatgaataaaaataaatagaCAGATATG
ACCGTTCCAACCTGATTTATCCTGAGGTATCTGGAAAGTATTAGCAAGGA
CATTATGGCATCAGCTCGGGGTGATATTTTCGTGCAGAATGATTCAGCTT
TTGAGGgtaaaaacaacaaagacaaaatgtGGACAGCATGTTTTGCTGCA
TTTTCCGCTGCCCTGGCTACTGTAAATTTTGGATATGCTCTTGGATTCAC
AGCAGAAGCAGAATTATCTGAACAATTCAATTCAAACAACTCTGCTATTG
ATTTGTCAATGTTGAATGGGAATTCATCCAAAGGTTTCTCTATGTGTGAT
cctgattttgatatttttgcgGTAAGTCATAACGTTCAGAGAGGTTTCTA
TCCCTCTCTTAAAATGTACTCTCCCTAATTCTGAGAAGGAATAAGTAAGT
TTACACAAGAGTAGGATGAGCTAGATTCGAACGTTCTAGAGGATACTGAT
TTCACCTCTGTTTTTGAGGTCTTGTAAATTACTAGGAATTGCAAATAATG
TTTCTAATATCCTTTTTATTTCAAGTCAGTTGTGGCACTAGGCGCTCTAG
TTGGTGGTCTCTTGGCTGGCATACTGATTGATAAGATTGGACGGAAAACT
ACCATTATCTCAACAactattttctactttcttgGATGGGTTCTCATTGC
AAACAGTTATTGTTATTATGGTAAGCACGGAGGCATTGGTGATCCAGAAT
TTTGTCGAAAACACTCAAAACAATGGTATTATAGCATGCTGTATTGTGGA
CGTGTTATTACTGGAATTGGTGTGGGTATGAGCTCGCTTGTGGTGCCTGT
ATGAGTCTTATTTTAATTAGTTATTTCATTATTCTTGGCTAATATTGAAA
AATGATTGTTCTGATATAAGAAGGATCATAATTATTGTAAAATTGAAGaa
acaaaatatgaaaagaCCCTCATTAATACTTATCAATGGACTGAATAGGT
TCTTACATTTTATTAACCATTCGTTTTACGTTACATGTTCAGGTGTACAT
TGCGGAAATTGCATCAGCGCGCATGCGTGGAGCACTTGGAAACATCAATC
AGTTGTCAATCAATTTTGGATTTGTTGTAGCCTACATGACAGGATACAAA
CAAAATCTTCCCACAACAGGTTTAAATTTTAATATACCATATTTCCTCTT
TTTAACACCACCTTCTAAAAAGTAAGGCACTTAAGAGTGCATTCAGCGAG
TTTAAGtaatttataaatttggtaaACTGATTTTTGTGAACAAGCTGTTA
TCTGTTGAATATTTTAGCCAGAAAAAGCTGAGAATGAAACACAAGAGGga
atttttgagcaaaatatttgGGACTGCTGGTACTTTTAttgtttgatttt
taaccctaaGCTTTTTGAATAGGTCTAACTAAGGAAATAATTTAAATTAa
tgaataataatttttttacaaattatctTCATTTTTTGCAGCTTACGTAC
CAATCGGAANCAGCATAATTTTCATTCTTACAATTTATTTTAACTGAACC
AGATTCCAAATTATATTCACAACAGCTTACGTACCAATCGGAATCTCAAT
TCTCAACCTTATTCTGATGGTTTTCTTCTTACCTGAGACACCGCGATATC
TTTTGGCAAACAACAGACGACATGATGCCATCCTCGCATTGTATTGGTTA
AGAGGTCCAGACTATCCAGTGGAAGaggaatgttttgaaattgaaggCCA
TGTTAATTTTGGTATGTGTTACTTCTACTAAAAAAAGGGTAGGAGGTTTA
TCTTTTGACAAAATGTATAGCTCATTCATTTTGCATGAAAATAACACTGC
TAGCTGATGCAATTTAATGACTTTGAGGTTTTTGGAGGTTAGTTATTTTC
AGTTCCTACTTCATATTTCATCCACTATCCTTTCTTTCTTATTAGGCACC
CAAGATCAATGGCAATGGAAGGATCTGAAAAGTTCCACATTCTACTGGCC
GCTTTTCATTGCacttagtttaatgttttttcaAGAATTCAGTGGTATAA
ATTGTATCTTATTTTACTGTTCTTCCATCTTTCTTGCATCTGGGATAGGT
GCACGAGTAAAACCTGAAGATCTAGTTAACTCTAAGAAGATACTGGAAGC
TTTAAAGAATGACTCCAAATTGTATGCCTTGTTTGTCTGCTCAacacttt
tcatttttactgGAATATCTTGCTTCCTAGTGGACCGATATGGACGCCGG
AAACTCCTCCTATCCGGTAGTGTGGGAATGTTTATCTCACTGATACCAGT
CAGTGTGTATGTTTATCACTACCAATTCAACATGAAGCAAATAATTGATT
TCTtatcaaaacaagaaaacacaACATATGCCATTTTAGCTTTGGTGTGT
ATACTCAGTTTTATTGCAATGTTCTCAATTGGATGGGGTCCGCTGCCATG
GTTACTCATGTCTGAATTATTCCCAATCAAGACAAGAGGTATTGCAACTG
CCATTGTCACTTTCTCAAACTGGTTATTTGTGTTTACAACGACTTCATCT
TTCTGTAAAGTCATTTATGGAATCCATATTTATGGTACACTATGGACTTT
TGCAATCATTGTAGTTATGGGTTTCTTTTTCACGCTGTTTTTTGTCCCTG
AAACTCAAGGTCGACCACTGGAAGAAGTAGCAGAACTTTTTATAAGACGG
AATTTGCTGCAGGTCAGCATTCCATGGACCAGACACGATGCAttataatc
aatttttttttaagttgctTGAAGTTGCAGACAAATCCTtacaataattc
aaaaatttgatacAGGATACACTGCTTCAACTTTACCGTCCTATCtaaaa
gacaaaatattttttaacaaagattTTCGTACTGAAAACATGCCTTAAGG
GAAGAAGATTTGTAAACTCTAGTCAAAATTGAAAGATTCTTTCAAGACGA
ACAAAAGAAGATTGCCCAAAAATTCTTTGATTTGAATaagaaatctaaat
ttttgaattaatatttttcaaagatgtTTTTGTAAATCATATATTTTGTG
TTCTTTTGAAGATTACTTGTttattttaatatctttttataagattcttt
ttttattgaaattttgtaacattttacattaaatttgaattattatAGTA
TAGTCCTGACAAAGGTAATGGTTTATTTAAAAGAACAACAATGAAATCAA
GACCTGGTTGAAAATTAAGTATCCCCCCTTATTTGACAAACAAAGAAGTC
TTTTTAGAGTAAAGATTAACACTAAGATTAACAATTtacctttcaaaaaa
aattaatatttttgggGGATTATTTTCCTGGTAGGCTCTTAACACACCTg
ccttttaaaatttcatttttctaacgTTTTTCTActctttttacattttt
ccaGATAAACCAATACAAatacgaaaattaaaaaagactgACAAGATGCT
CCCAATAATATGACTTCTTCCATCAGTATTTAGACATTGGGAACTGGCAC
TAAGAGGTCAACCTTAAAGAAAAGTTATTACAATAATGGCATCAGCTCGC
GGTGATATTTTCATACAAAATGATTCAGCTTTTGAGGGTAAAAACAACAA
GGACAAAATGTGGACAGCATGTTTTGCTGCATTTTCTGCTGCCCTGGCTA
CTGTAAATTTTGGATATGCTCTTGGATTCACAGCAGAAGCAGAATTATTG
CTACAGTTTAATCcaaattttaatgtaaattcaACAAAAAGATTTGCAGG
GTGTACTGAagatttcgatttctttgcaGTAAGTAACATTGCATTAACAA
CAGCAGGTAGTTGGTCCATTTTTTCTTCGATTAAAAATAACAACCTCTTC
AATGCAAGTttagttttttggacctaccccggtggggtggaggtcctata
aattaacctgtgtttgtttgtccgttcgttcgtctgttaccaacttttct
caggattgaatcataggaatcttttgatttttggtacaaaggtgcaaaat
ggtggtgggcaAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNG
AACCGACACAAACCTGTGAAAACCATTCTCTAAACTATTATTTGAGTATG
GTGTACACTGGACGAGTGATAACTGGCGTTGGAGCTGGGATGAGCTCCTT
AGTTGTGCCTGTAGGTTTTCTCTTACAATAACACAAATAGCTCTATATCT
GATAAGAAGTAGGCCCAGAACCGTCCGTTAGGGTTACCAAGATTTAAGAT
TATTTAGTAtttgttgacccccccccctcctcaattaatatttttttaat
taaaccTTACTTCGTTATGATATGTACTTCAATATGTATCTGATTATGTA
CACAAGCATGAATACCAATCCTTGCCAATCAGATCACTTTTGATATTTGA
CAGTATTtccttttgacttttttcaaactccaaATTAAACCACTTCGTTG
AATCAAGGTTGATAGGTGTATGAGATTTAGTcacttttaatatttttatc
cccataaTTGATCTCCAaagttttctttattaaaatatcacaaaagattt
tttctttactCCATGTTCAGGTGTACATTGCGGAAATTGCATCAGCGCGC
ATGCGTGGAGCACTTGGAAACATCAATCAGTTGTCAATCAATTTTGGATT
TGTTGTAGCCTATTTGACAGGATACAAACAAAATCTTCCAACAACAGGTT
TTGTACTATTGCCATCATATTATCAATAACATATTATATAGGGAAGTCAA
GATCTTATATATTTACAGCTGAGGTCTAGTTATGCCTGTTGAATTATGTC
TACCAAACATAATACTCAGTTCAAACTGGAGGTCAAGGAAATGTAACTTT
TGCATACTTTACCTTTCAGCATAATTTTCATTCTTACAATTTATTTTAAC
TGAACCAGATTCCAAATTATATTCACAACAGCTTACGTACCAATCGGAAT
CTCAATTCTCAACCTTATTCTGATGGTTTTCTTCTTACCTGAGACACCGC
GATATCTTTTGGCAAACAACAGACGACATGATGCCATCCTTGCGTTGTAT
TGGCTAAGAGGTCAAGACTATCCAGTGGAAGaggaatgttttgaaattga
aggCCATgttaattttggtattttttcacttttgcttttatTATTCACTT
TATTAACCACTCAACTTGAAGAaaggattttgtttttttcctcaAAGAGT
TCTTTGATATCAACTTTTCTCCAATTTTAGGCTAAGGGTTTTTTCTTAGA
CTACaatcccttctcacagacccagtgagatttttttcagccatttgGGC
TAAAAACAACGAACCAAAAATTGATGGGATtgattttcctatttttctaa
tggctggggatttgaattcgaTTGTTTGCGAGCCAGAGatctcagtgggg
atagaaaaagtagcataatattttgtacTAAGGATTTGCTtaacactctt
ttttttataagcaaacgGGAAATTCAGGTCAAGGCTCAAcatgcttagca
aaatctcattttcagccttaatttatgcttatttatcTGCTTAGACttcg
attttttgattttctttgggtttaagaaaattttgtatttttaagtgGGA
ATTGATTCAGCTCAAAGAATGAAAGTTTTATCTAAAATTTGACACTGCAG
GTGAAAATCTTTGGTCCAAGAAAGCTCAAGCAGCTTTAAAAGCaacccta
aaaaggtcagcgCTTTAGAAAAACTGCactaatttttgcatttcagcttg
gaggtatgcttGGAATTATGCTTATTTTCAACGGGGACAAAANCTCAAGC
AGCTTTAAAAGCaaccctaaaaaggtcagcgCTTTAGAAAAACTGCacta
atttttgcatttcagattagagtataattttccactggggacgatatttt
ggccaatttttcaggTGGGAAGgtgtcccagtgggtctgtgagaaagggg
tgtttagACTTTGGTAAAACATTTAGTACTTTTAGAGTGGTTAACCTTAA
cattaaatgaatattttttcagGAACTCAAGAGCAATGGCAATGGAAGGA
TCTGAAAAGTTCCACATTCTACTGGCCGCTCATCATTgcactttttttga
tgtttttccaAGAATTCAGTGGTATAAATTGTATCTTATTTTACTGCacc
tcaattttttttgcttctgGGATTGGTGCTCAATTGAAACCTGGAGATAC
CCATATATTGGATACTTTGACAAAAGGCTCAGAAGAATATGCAATATATG
TGTGTTTCACACTGTTCATTTTCACCGGAATTTCCTGCTTTTTAGTGGAC
CGGTTTGGACGCCGAAAACTCCTCTTATCCGGTAGTGTTGGAATGTTTAT
CTCACTAATTCTAGTAAGTGTGTACGTCCACTCTTATCCTGTTTATTATA
ATAATGTTGATGACATTTCTAATTTCTTTTCGAAACAAGAAAACACAACA
TATGCCATTTTAGCTTTTGTGTGTATACTCTGTTTTATTGCAATGTTCTC
AATCGGATGGGGCCCGTTGCCATGGTTACTCATGTCTGAATTATTCCCAA
TCAAGACAAGAGGTATTGCAACTACAATTGTCACTTTATCAAACTGGTTA
TTTGTGTTTACAACGACTTCATCTTTCTGTTTTCTCGTGAATAAAATNNN
NNNNNNNNNNNGCTCAATTGAAACCTGGAGATACACATATATTGGATACT
TTGACGAAAGGCTCAGAAGAATATGCAATATATGTGTGTTTCACACTGTT
CATTTTCACCGGAATTTCCTGCTTTTTAGTGGACCGGTTTGGACGCCGAA
AACTCCTCTTATCCGGTAGTGTTGGAATGTTTATCTCACTAATTCTAGTA
AGTGTGTACGTCCACTCTTATCCTGTTTATTATAATAATGTTGATGACAT
TTCTAATTTCTTTTCGAAACAAGAAAACACAACATATGCCATTTTAGCTT
TTGTGTGTATACTCTGTTTTATTGCAATGTTCTCAATCGGATGGGGCCCG
TTGCCATGGTTACTCATGTCTGAATTATTCCCAATCAAGACAAGAGGTAT
TGCAACTACAATTGTCACTTTATCAAACTGGTTATTTGTGTTTACAACGA
CTTCATCTTTCTGTTTTCTCGTGAATAAAATTCATATTTATGGTGCCATG
TGGATCTTTGCAACAATTGTATTTATTGGTTTCTTCTTTACCCTGTTTTT
TGTACCGGAAACCCGGGGTCGCCCACTTGAAGAAGTAGCAGAACTTTTTA
TTAGACGGAAGGTGTTGCAGGTCAGCATTCTGTGGACCAGACATGATGCG
TCAATGTAATCACCTATCAATTTGTTGGCAATGACTGACTGATCACCACA
TTAATAAATTGGAAAACAATTTccatttttaatgatttttaatttttttt
gcacaacACACCTCTTATGCTGAAAGTtacacccccttttcacagacccg
gtaggattttttcagccagtgggaataaaataacggactgaaactttatg
gggattgatatttccatatttttcatggctgggtatttcaattcttttgt
tttcaagtcagaaaattcagtgagcatggaaaatagcataataatttgca
gtgaggattggtttatctGATTACTTTCAGTGTGGACAAAAATGGGCGGC
TAATTTTCCATCGGAGACGGTATTTTGGCTAGTTTTTCTAGTGGGAAGGG
GTCTCAatgagtctgtgagaagggggtgtaaagttgttctttcttttctt
ttgtgaaATGATGTTCTTgatgttgttgttgaaattagtgttttgttttg
attatttaaaTACATTTGATAGTTgacaattattttttcaatcattttta
aaataatcttaATTTATGTATTATGACCTTAGAATCTAAATTAAACCAAT
GAATACAAGAGTAAATcacttttattttcagtttttgtatttGCAATGTA
TCTTTGAATGATTTGTGATGTTACAATGTTACAATTTCTATATAGGTTGC
TATATATCTTTTTTACATATT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00055015-exon-scaffold_248-1491911889:329963..330333 | TCONS_00055015-exon-scaffold_248-1491911889:329963..330333 | Clytia hemisphaerica | exon |
| TCONS_00055015-exon-scaffold_248-1510915933:329963..330333 | TCONS_00055015-exon-scaffold_248-1510915933:329963..330333 | Clytia hemisphaerica | exon |
| TCONS_00055015-exon-scaffold_248-1575043694:329963..330333 | TCONS_00055015-exon-scaffold_248-1575043694:329963..330333 | Clytia hemisphaerica | exon |
| TCONS_00055015-exon-scaffold_248-1491911889:330538..330810 | TCONS_00055015-exon-scaffold_248-1491911889:330538..330810 | Clytia hemisphaerica | exon |
| TCONS_00055015-exon-scaffold_248-1510915933:330538..330810 | TCONS_00055015-exon-scaffold_248-1510915933:330538..330810 | Clytia hemisphaerica | exon |
| TCONS_00055015-exon-scaffold_248-1575043694:330538..330810 | TCONS_00055015-exon-scaffold_248-1575043694:330538..330810 | Clytia hemisphaerica | exon |
| TCONS_00055015-exon-scaffold_248-1491911889:331005..331131 | TCONS_00055015-exon-scaffold_248-1491911889:331005..331131 | Clytia hemisphaerica | exon |
| TCONS_00055015-exon-scaffold_248-1510915933:331005..331131 | TCONS_00055015-exon-scaffold_248-1510915933:331005..331131 | Clytia hemisphaerica | exon |
| TCONS_00055015-exon-scaffold_248-1575043694:331005..331131 | TCONS_00055015-exon-scaffold_248-1575043694:331005..331131 | Clytia hemisphaerica | exon |
| TCONS_00055015-exon-scaffold_248-1491911889:336344..336529 | TCONS_00055015-exon-scaffold_248-1491911889:336344..336529 | Clytia hemisphaerica | exon |
| TCONS_00055015-exon-scaffold_248-1510915933:336344..336529 | TCONS_00055015-exon-scaffold_248-1510915933:336344..336529 | Clytia hemisphaerica | exon |
| TCONS_00055015-exon-scaffold_248-1575043694:336344..336529 | TCONS_00055015-exon-scaffold_248-1575043694:336344..336529 | Clytia hemisphaerica | exon |
| TCONS_00055015-exon-scaffold_248-1491911889:337435..339433 | TCONS_00055015-exon-scaffold_248-1491911889:337435..339433 | Clytia hemisphaerica | exon |
| TCONS_00055015-exon-scaffold_248-1510915933:337435..339433 | TCONS_00055015-exon-scaffold_248-1510915933:337435..339433 | Clytia hemisphaerica | exon |
| TCONS_00055015-exon-scaffold_248-1575043694:337435..339433 | TCONS_00055015-exon-scaffold_248-1575043694:337435..339433 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_248 | supercontig | scaffold_248:329963..339433 + |
Blast
BLAST of TCONS_00055015 vs. Swiss-Prot (Human)
Match: GTR8 (Solute carrier family 2, facilitated glucose transporter member 8 OS=Homo sapiens GN=SLC2A8 PE=1 SV=3) HSP 1 Score: 167.162 bits (422), Expect = 1.170e-43 Identity = 144/460 (31.30%), Postives = 228/460 (49.57%), Query Frame = 3
Query: 222 VNFGYALGFTAEAELSEQFNSNNSAIDLSMLNGNSSKGFSMCDPDFDIFASXXXXXXXXXXXXXXILIDKIGRKTTIISTTIFYFLGWVLIANSYCYYGKHGGIGDPEFCRKHSKQWYYSMLYCGRVITGIGVGMSSLVVPVYIAEIASARMRGALGNINQLSINFGFVVAYMTGYKQN---LPTTAYVPIGISILNLILMVFFLPETPRYLLANNRRHDAILALYWLRGQDYPVEEECFEIEGHVNFGTQEQWQWKDLKSSTFYWPLIIALFLMFFQEFSGINCILFYCTSIFFASGIGAQLKPGDTHILDTLTKGSEEYAIYVCFTLFIFTGISCFLVDRFGRRKLL-LSGSVGMF-ISLILXXXXXXXXXXXXXXXDDISNFFSKQENTTYAILAFVCI--LC-FIAMFSIGWGPLPWLLMSELFPIKTRGIATTIVTLSNWLFVFTTTSSFCFLVN 1577
++FG+ALG+++ A S Q + + + D F +VV LGA GG+L G L+D+ GRK +++ ++ + G+ +I + + ML GR++TG+ G++SLV PVYI+EIA +RG LG+ QL + G ++AY+ G+ L VP + ++L++ F+PETPR+LL +RR +A+ AL +L G + E+ G ++ + L+ Y P II + LM FQ+ SG+N ++FY +IF + K S ++ V +FT ++ ++DR GRR LL LSG V +F S + ++ IS S Q LA++ + +C FIA F++GWGP+PWLLMSE+FP+ +G+AT I L+NWL F T F L+
Sbjct: 38 LSFGFALGYSSPAIPSLQRAAPPAP--------------RLDDAAASWFGAVVTLGAAAGGVLGGWLVDRAGRKLSLLLCSVPFVAGFAVITAAQDVW----------------------MLLGGRLLTGLACGVASLVAPVYISEIAYPAVRGLLGSCVQLMVVVGILLAYLAGWVLEWRWLAVLGCVPPSL----MLLLMCFMPETPRFLLTQHRRQEAMAALRFLWGSEQGWEDP--------PIGAEQSFHLALLRQPGIYKPFIIGVSLMAFQQLSGVNAVMFYAETIF----------------EEAKFKDSSLASVVVGVIQVLFTAVAALIMDRAGRRLLLVLSGVVMVFSTSAFGAYFKLTQGGPGNSSHVAISAPVSAQPVDASVGLAWLAVGSMCLFIAGFAVGWGPIPWLLMSEIFPLHVKGVATGICVLTNWLMAFLVTKEFSSLME 433 HSP 2 Score: 99.7525 bits (247), Expect = 8.622e-22 Identity = 71/189 (37.57%), Postives = 102/189 (53.97%), Query Frame = 1
Query: 1642 KGSEEYAIYVCFTLFIFTGISCFLVDRFGRRKLL-LSGSVGMF-ISLILXXXXXXXXXXXXXXXDDISNFFSKQENTTYAILAFVCI--LC-FIAMFSIGWGPLPWLLMSELFPIKTRGIATTIVTLSNWLFVFTTTSSFCFLVNKIHIYGAMWIFAXXXXXXXXXXXXXXPETRGRPLEEVAELFIRR 2193
K S ++ V +FT ++ ++DR GRR LL LSG V +F S + ++ IS S Q LA++ + +C FIA F++GWGP+PWLLMSE+FP+ +G+AT I L+NWL F T F L+ + YGA W+ + FTLF VPET+G+ LE++ F R
Sbjct: 289 KDSSLASVVVGVIQVLFTAVAALIMDRAGRRLLLVLSGVVMVFSTSAFGAYFKLTQGGPGNSSHVAISAPVSAQPVDASVGLAWLAVGSMCLFIAGFAVGWGPIPWLLMSEIFPLHVKGVATGICVLTNWLMAFLVTKEFSSLMEVLRPYGAFWLASAFCIFSVLFTLFCVPETKGKTLEQITAHFEGR 477
The following BLAST results are available for this feature:
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