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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00055046 ID=TCONS_00055046|Name=TCONS_00055046|organism=Clytia hemisphaerica|type=transcript|length=1058bp
ATTGTTAATATGAAAGTATTCACTCACAAAATTATTTCTCGTAATTACTT
AGCTAAAAGTATTGATAGAACTTGGGCATTACTCTAGCTAAGTGTAGTGA
TAACTAAACTATAAGGTGGTGCTCAGAATTCTAGCATTTAATATGCCAAT
CTTCTTTTCTTCTCCCCATTTTACCCCAAACCTTGTGTTAcccatcaaaa
tatattttctgtAGTGTGTACTTTTTAATCTTAGAGTTTTCAGCAATGTT
TGATATAACTCCAAAAAAGTGCTGCTTGAAGTATGATCCCCCAACATTGG
TTTTATTTTATGAGATTTCTCCAGCTAAGCTCCACAGGAGGTCAATACCC
ATAAAAGACCTTCCCATGAAAGAGGGaaatctaattttgaaagacttaTA
CCAAAGCCATCATGgtaaatatttagaaaaattcaaatcagAACAGATTG
TGCGTTTACTGAATATTCTGATTGAGAAGAGCAACGgtatcaaaatcaga
aaaacaaaTAATGAAAACTTTGATGGAATAAATTTCAACAAAGACAATCT
CAATAAGTTGGACGATCAAAAATTGAACGAAGTAAAGAAACATATGaata
attcttttgaaaaaaatcaagtcaAACCAGGTGACCAAGATTGGAAATAC
AACATTGAGGTTGATTTTGAGGCTGGTGATAGTGGGCATGGTGGTGATCA
GGGGGGTGATCAAGTAGGTATTGAGACAGCTGGATGGGATGATGAATCGG
ATATGGAATTTTAGATTTGTTAATGgtaatttgtaaaatttaaatTGTAA
ATAATAATATTGCACATATAGATGTTAattgtatttaatttttgatacgT
TTGAACTTTTAAGtgattcaaattgattttatcCATTCATCATATTTCTA
ATTTCTAGTCATTGTTCTATAAACGATTTGTCAAAAAGATCAGATGTAAT
TGATATGAACAAGTTTTAGACCACTAGACCACTCGCTCAGCCAAGTTCAA
TATTGGATGTTCTCTATGATTATCaatgaagtttgtttatttttgcacAC
CACTTTTT Run BLAST on NCBI transcript from alignment at scaffold_248:393990..395047- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00055046 ID=TCONS_00055046|Name=TCONS_00055046|organism=Clytia hemisphaerica|type=transcript|length=1058bp|location=Sequence derived from alignment at scaffold_248:393990..395047- (Clytia hemisphaerica)
ATTGTTAATATGAAAGTATTCACTCACAAAATTATTTCTCGTAATTACTT
AGCTAAAAGTATTGATAGAACTTGGGCATTACTCTAGCTAAGTGTAGTGA
TAACTAAACTATAAGGTGGTGCTCAGAATTCTAGCATTTAATATGCCAAT
CTTCTTTTCTTCTCCCCATTTTACCCCAAACCTTGTGTTACCCATCAAAA
TATATTTTCTGTAGTGTGTACTTTTTAATCTTAGAGTTTTCAGCAATGTT
TGATATAACTCCAAAAAAGTGCTGCTTGAAGTATGATCCCCCAACATTGG
TTTTATTTTATGAGATTTCTCCAGCTAAGCTCCACAGGAGGTCAATACCC
ATAAAAGACCTTCCCATGAAAGAGGGAAATCTAATTTTGAAAGACTTATA
CCAAAGCCATCATGGTAAATATTTAGAAAAATTCAAATCAGAACAGATTG
TGCGTTTACTGAATATTCTGATTGAGAAGAGCAACGGTATCAAAATCAGA
AAAACAAATAATGAAAACTTTGATGGAATAAATTTCAACAAAGACAATCT
CAATAAGTTGGACGATCAAAAATTGAACGAAGTAAAGAAACATATGAATA
ATTCTTTTGAAAAAAATCAAGTCAAACCAGGTGACCAAGATTGGAAATAC
AACATTGAGGTTGATTTTGAGGCTGGTGATAGTGGGCATGGTGGTGATCA
GGGGGGTGATCAAGTAGGTATTGAGACAGCTGGATGGGATGATGAATCGG
ATATGGAATTTTAGATTTGTTAATGGTAATTTGTAAAATTTAAATTGTAA
ATAATAATATTGCACATATAGATGTTAATTGTATTTAATTTTTGATACGT
TTGAACTTTTAAGTGATTCAAATTGATTTTATCCATTCATCATATTTCTA
ATTTCTAGTCATTGTTCTATAAACGATTTGTCAAAAAGATCAGATGTAAT
TGATATGAACAAGTTTTAGACCACTAGACCACTCGCTCAGCCAAGTTCAA
TATTGGATGTTCTCTATGATTATCAATGAAGTTTGTTTATTTTTGCACAC
CACTTTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00055046-exon-scaffold_248-1575043694:393990..395047 | TCONS_00055046-exon-scaffold_248-1575043694:393990..395047 | Clytia hemisphaerica | exon |
| TCONS_00055046-exon-scaffold_248-1510915933:393990..395047 | TCONS_00055046-exon-scaffold_248-1510915933:393990..395047 | Clytia hemisphaerica | exon |
| TCONS_00055046-exon-scaffold_248-1491911889:393990..395047 | TCONS_00055046-exon-scaffold_248-1491911889:393990..395047 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_248 | supercontig | scaffold_248:393990..395047 - |
Blast
The following BLAST results are available for this feature:
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