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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00055050 ID=TCONS_00055050|Name=TCONS_00055050|organism=Clytia hemisphaerica|type=transcript|length=1035bp
AAACATTTGGTCGTCCACAACCATCATTTAAGTACAACAAACACATCACC
GAAGCGATCAATTTCCTTTTcttaaatatctttccaacataTCTTGGCTT
CGGAGCGTTCTTTAACCTCGTCATCGTCATATactttatcaaaacaaatt
acaAAAAGCTCACAAGAACTACACCGTACCATTTCTTAATCATCAATCTG
GCTGTGACTGATTTTTCAACTTGTGTTGGGTTAAGCATTCTAATTCACTA
TTGGGTACAAAGGTCTTGGAAACTCGGCGAAATCGGTTGTTTTTTCATGG
CAGatttcttcaaaaaagtttGCTTGCTCTCCTCATGTTGGTATTTAGTT
CTTCTCTCTTACACGAGATATCGAAGCATTGTCAAGCCGTTCGAAAGGAG
ACTTAGCAAGCGAAAAATAACCTACGCTTGTGTACTGGTATGGATGGCAT
CGATTGGGATTTTCCTAAAATTCTTTATCAATCGAAAATTGATTGTATAT
GGGGGAGGGTTAAGATGTTCGTTGCAACATATCGACATGACAATCATGAT
TACGTACATGGTCGTTGGTTATTGTCTAGATAGTTTTATCCCGATCGGAA
TACTGGTTTATCTATActggaaaattaagcaaaaattggACTGCGATCAA
CTTCGGAATACGTTTCCCGATAATAGCCCGATTTGGAAACGAAATCAAAC
AGCGTTAAGAACTATGAAAGCTCTAACTGTTTTGTACGTTTTCACGATAA
TACCGGGACGCGTTTTTCACTCCATAGGACTGGGCCTAGCAACGCATGCA
CTGGAAACTGGCAATAAATACCTTTTGGATTATGCTATCGTTTTTACAAA
TATCTTGTCCCCTTTTGCATTTTATTCGAATaacattttaaacatttttg
taTATGCCAAGCTGATTGTAGGTTTCAAGAAGTTTCTGTTGTCGATATTA
ACCCTGGGAATGTACAGGAGAAGAACTATCGTGGACGGAAAGACACAGAA
TTTGAGTTTAGAGCAACTTGGCAATGTAAGAAAGA Run BLAST on NCBI transcript from alignment at scaffold_248:270144..271178 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00055050 ID=TCONS_00055050|Name=TCONS_00055050|organism=Clytia hemisphaerica|type=transcript|length=1035bp|location=Sequence derived from alignment at scaffold_248:270144..271178 (Clytia hemisphaerica)
TCTTTCTTACATTGCCAAGTTGCTCTAAACTCAAATTCTGTGTCTTTCCG
TCCACGATAGTTCTTCTCCTGTACATTCCCAGGGTTAATATCGACAACAG
AAACTTCTTGAAACCTACAATCAGCTTGGCATAtacaaaaatgtttaaaa
tgttATTCGAATAAAATGCAAAAGGGGACAAGATATTTGTAAAAACGATA
GCATAATCCAAAAGGTATTTATTGCCAGTTTCCAGTGCATGCGTTGCTAG
GCCCAGTCCTATGGAGTGAAAAACGCGTCCCGGTATTATCGTGAAAACGT
ACAAAACAGTTAGAGCTTTCATAGTTCTTAACGCTGTTTGATTTCGTTTC
CAAATCGGGCTATTATCGGGAAACGTATTCCGAAGTTGATCGCAGTccaa
tttttgcttaattttccagTATAGATAAACCAGTATTCCGATCGGGATAA
AACTATCTAGACAATAACCAACGACCATGTACGTAATCATGATTGTCATG
TCGATATGTTGCAACGAACATCTTAACCCTCCCCCATATACAATCAATTT
TCGATTGATAAAGAATTTTAGGAAAATCCCAATCGATGCCATCCATACCA
GTACACAAGCGTAGGTTATTTTTCGCTTGCTAAGTCTCCTTTCGAACGGC
TTGACAATGCTTCGATATCTCGTGTAAGAGAGAAGAACTAAATACCAACA
TGAGGAGAGCAAGCaaacttttttgaagaaatCTGCCATGAAAAAACAAC
CGATTTCGCCGAGTTTCCAAGACCTTTGTACCCAATAGTGAATTAGAATG
CTTAACCCAACACAAGTTGAAAAATCAGTCACAGCCAGATTGATGATTAA
GAAATGGTACGGTGTAGTTCTTGTGAGCTTTTtgtaatttgttttgataa
agtATATGACGATGACGAGGTTAAAGAACGCTCCGAAGCCAAGAtatgtt
ggaaagatatttaagAAAAGGAAATTGATCGCTTCGGTGATGTGTTTGTT
GTACTTAAATGATGGTTGTGGACGACCAAATGTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00055050-exon-scaffold_248-1491911889:270144..271178 | TCONS_00055050-exon-scaffold_248-1491911889:270144..271178 | Clytia hemisphaerica | exon |
| TCONS_00055050-exon-scaffold_248-1510915933:270144..271178 | TCONS_00055050-exon-scaffold_248-1510915933:270144..271178 | Clytia hemisphaerica | exon |
| TCONS_00055050-exon-scaffold_248-1575043694:270144..271178 | TCONS_00055050-exon-scaffold_248-1575043694:270144..271178 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_248 | supercontig | scaffold_248:270144..271178 . |
Blast
The following BLAST results are available for this feature:
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