TCONS_00055071 (transcript) - C. hemisphaerica

Overview
NameTCONS_00055071
Unique NameTCONS_00055071
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length206

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00055071 ID=TCONS_00055071|Name=TCONS_00055071|organism=Clytia hemisphaerica|type=transcript|length=206bp
CAAGAAATGCTTTTCGAAACATTGAACAATATTGTTTAGTCCGTTTTACC
AGGACTGAATTTTATTagcatcaaaagaaaatttaatgttaacaaaattt
caaaagagtGAAGTCTCGGGCCTTTCTTCTCACAAGTGATTTCTATTCCT
ATTAAAATTCAGTATAACAAAAGACAAACtctacaaaaatattaactaaA
TACTAA
Run BLAST on NCBI

transcript from alignment at scaffold_249:4..209

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00055071 ID=TCONS_00055071|Name=TCONS_00055071|organism=Clytia hemisphaerica|type=transcript|length=206bp|location=Sequence derived from alignment at scaffold_249:4..209 (Clytia hemisphaerica)
TTAGTATttagttaatatttttgtagaGTTTGTCTTTTGTTATACTGAAT
TTTAATAGGAATAGAAATCACTTGTGAGAAGAAAGGCCCGAGACTTCact
cttttgaaattttgttaacattaaattttcttttgatgctAATAAAATTC
AGTCCTGGTAAAACGGACTAAACAATATTGTTCAATGTTTCGAAAAGCAT
TTCTTG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034695XLOC_034695Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00055071-exon-scaffold_249-1491911889:4..209TCONS_00055071-exon-scaffold_249-1491911889:4..209Clytia hemisphaericaexon
TCONS_00055071-exon-scaffold_249-1510915933:4..209TCONS_00055071-exon-scaffold_249-1510915933:4..209Clytia hemisphaericaexon
TCONS_00055071-exon-scaffold_249-1575043694:4..209TCONS_00055071-exon-scaffold_249-1575043694:4..209Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_249supercontigscaffold_249:4..209 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00055071 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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