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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00055079 ID=TCONS_00055079|Name=TCONS_00055079|organism=Clytia hemisphaerica|type=transcript|length=939bp
GGAACATCCGTATCTTCAAAGACCGTTCTTTCAAGTCCACCCATGCCACA
CGGAAACTATGCTGAAAACATTACTTCCAGAAAAGAGGTAAGTCTTGCGG
CCCCCGCTTGAAATCGACCGTAGAGGATGGCACCCTGCCATTAAGCCGCT
GGCacccactaacggattcgtgctcatATTATATGCTaactgcggttttg
tagagatCTGCGATTAAAAGTACATTGACATTGCTACGAGTCACGATGGT
CTTTCCTTTTAATGAGGTCTCCCAGTCACATTTCAAATCACGCCATCATg
caaagaaaatttccaaatcacgttatcgcgaattaaatttcctttctatc
acgatcacgttaATCACgtactttaaaatcttaaatcacgaaatcacgaa
cTTGAAAAAACGCTAATCACATGGGGAACCTCTTTAATTACTAAATAAAA
TATAGAGTGGCATTCTAAGTCTTTCTGGTTGTTGGCAAAAGCCTGCTAag
attgagtttaaagccccgcggggctagagaagaatcttaaacctttctca
agcaagaaaaagccttaagatttgAATGACGAATGACGGATTAAACCTAg
ccctttcttttttttttcaagcgacGTATATTTTTCTAGTAATGGGTTTT
ACTTTTAATCTggtgtttgtgtgaaaaccacgcctCACgagttctggatg
ggaaataagtggcttcaaatccttTTCTATCCAAGAGTTTCAAATCTAGC
CTCCTCGGGACTTTGAACACAGTATGCCATAGACCTTGAATAAACATCTA
ACCCTTAGCGCCGTAGCCCTGAGCACaacattcaaaatattcttctttTA
TCTTGCAATAAAACTTTCCAAGTCTGAttcaataagaaaaaaaattcaga
gaCTTTTAATCATTCCAAGTAAAACTAGTTACATTTccc Run BLAST on NCBI transcript from alignment at scaffold_25:45773..46711+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00055079 ID=TCONS_00055079|Name=TCONS_00055079|organism=Clytia hemisphaerica|type=transcript|length=939bp|location=Sequence derived from alignment at scaffold_25:45773..46711+ (Clytia hemisphaerica)
GGAACATCCGTATCTTCAAAGACCGTTCTTTCAAGTCCACCCATGCCACA
CGGAAACTATGCTGAAAACATTACTTCCAGAAAAGAGGTAAGTCTTGCGG
CCCCCGCTTGAAATCGACCGTAGAGGATGGCACCCTGCCATTAAGCCGCT
GGCacccactaacggattcgtgctcatATTATATGCTaactgcggttttg
tagagatCTGCGATTAAAAGTACATTGACATTGCTACGAGTCACGATGGT
CTTTCCTTTTAATGAGGTCTCCCAGTCACATTTCAAATCACGCCATCATg
caaagaaaatttccaaatcacgttatcgcgaattaaatttcctttctatc
acgatcacgttaATCACgtactttaaaatcttaaatcacgaaatcacgaa
cTTGAAAAAACGCTAATCACATGGGGAACCTCTTTAATTACTAAATAAAA
TATAGAGTGGCATTCTAAGTCTTTCTGGTTGTTGGCAAAAGCCTGCTAag
attgagtttaaagccccgcggggctagagaagaatcttaaacctttctca
agcaagaaaaagccttaagatttgAATGACGAATGACGGATTAAACCTAg
ccctttcttttttttttcaagcgacGTATATTTTTCTAGTAATGGGTTTT
ACTTTTAATCTggtgtttgtgtgaaaaccacgcctCACgagttctggatg
ggaaataagtggcttcaaatccttTTCTATCCAAGAGTTTCAAATCTAGC
CTCCTCGGGACTTTGAACACAGTATGCCATAGACCTTGAATAAACATCTA
ACCCTTAGCGCCGTAGCCCTGAGCACaacattcaaaatattcttctttTA
TCTTGCAATAAAACTTTCCAAGTCTGAttcaataagaaaaaaaattcaga
gaCTTTTAATCATTCCAAGTAAAACTAGTTACATTTccc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00055079-exon-scaffold_25-1491911889:45773..46711 | TCONS_00055079-exon-scaffold_25-1491911889:45773..46711 | Clytia hemisphaerica | exon |
| TCONS_00055079-exon-scaffold_25-1510915933:45773..46711 | TCONS_00055079-exon-scaffold_25-1510915933:45773..46711 | Clytia hemisphaerica | exon |
| TCONS_00055079-exon-scaffold_25-1575043694:45773..46711 | TCONS_00055079-exon-scaffold_25-1575043694:45773..46711 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_25 | supercontig | scaffold_25:45773..46711 + |
Blast
The following BLAST results are available for this feature:
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