TCONS_00055107 (transcript) - C. hemisphaerica

Overview
NameTCONS_00055107
Unique NameTCONS_00055107
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1288

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00055107 ID=TCONS_00055107|Name=TCONS_00055107|organism=Clytia hemisphaerica|type=transcript|length=1288bp
TTTTCTAGTTAtgatatttcaatttcaatctagttaataatctttttcaa
ttttaatagTGCATCGAATAAATAGatttaaaacaaaatggcttTGTCAA
GACCAGTTTACATTGTAGCTGCTAAGAGGACAGCATTTGGTGCTTTTGGT
GGAAAAGTCAAAGACCTTTCAGCAACAGTACTTGCAGAAAAAGCTACCAG
TGCTGCTTTGAAGGACATCAATTTGGACCCAGCTCATGTCCAGTCTGTCA
TCTTTGGTAATGTAATCCAGAGTTCATCAGACGCAGCATACTTAGCACGA
CATGCAGCTCTTGGTGCTGGTGTACCGCAAGAAGCTACTTCGCTCACCAC
AAACCGCCTGTGTGGGTCTGGTTTCCAAGCGGTCGTTAGTGCTGCTCAGG
AAATAGTTCTTGGAGATGCAGATATTGTAGTAGCTGGAGGCTCAGAAAAC
ATGAGTCAAGCGCCCTACGCCATCCGAAACGCCCGATTTGGTATCACTTT
GGGTGAAGGTCGAGAGatggAAGATACACTTTGGGCTGGTTTGACTGATT
CCTACATCAAAACTCCCATGGGTATCACAGCTGAAAACTTAGCCGCCAAA
TACGGAATCACTAGACTGGATGCTGACGAATTCGCTTTAGCTTCACAGGA
CAGATGGGctaaagCACACAAAGAAGGAGCATTTGCTGACGAGATTGCAC
CATTAGAAATTCAAGTGAAACGAAAGACAGTCACTTTCGATACTGATGAA
CACCCAAGGCCGGGCGTCACTATCGAGGCGTTACAAAAATTACCGCCCGT
CTTCAAGAAGAATGGTACAGTGTCGGCTGGAAATGCTTCGGGCATTTGTG
ATGGTGCAGCAGCATTGGTCTTAGCATCGGAAGAAGCATGTAAAACGCAT
AACTTGAAACCGTTAGCGCGTGTTGTTTCTTATGGAATCGCTGGTGTTGA
CCCGAGCATTATGGGTATCGGACCTTCGCCTGCAATCAAGATTGCTTTGG
AACGCGCCAAATTGTCGTTGAACGATATGGCCTTGGTGGAGGTCAACGAA
GCCTTCGCTCCACAATTCATCGCCGTTGAGAAAGATCTCGGCCTCGATCG
ATCCATCACCAACGCCTGTGGCGGCGCCATTGCTCTCGGTCACCCACTTG
GTGCGTCTGGCGCCCGCATCATGACCCATTTAACGCACGCCATCCGTCGA
AAGAACGAGCAGTATGCCATGGGCTCCGCCTGTATCGGTGGCGGCCAAGG
TATTGCAGTTCTATTGGAAAACATGAAATAAAGGACTT
Run BLAST on NCBI

protein sequence of TCONS_00055107-protein

>TCONS_00055107-protein ID=TCONS_00055107-protein|Name=TCONS_00055107-protein|organism=Clytia hemisphaerica|type=polypeptide|length=397bp
MALSRPVYIVAAKRTAFGAFGGKVKDLSATVLAEKATSAALKDINLDPAH
VQSVIFGNVIQSSSDAAYLARHAALGAGVPQEATSLTTNRLCGSGFQAVV
SAAQEIVLGDADIVVAGGSENMSQAPYAIRNARFGITLGEGREMEDTLWA
GLTDSYIKTPMGITAENLAAKYGITRLDADEFALASQDRWAKAHKEGAFA
DEIAPLEIQVKRKTVTFDTDEHPRPGVTIEALQKLPPVFKKNGTVSAGNA
SGICDGAAALVLASEEACKTHNLKPLARVVSYGIAGVDPSIMGIGPSPAI
KIALERAKLSLNDMALVEVNEAFAPQFIAVEKDLGLDRSITNACGGAIAL
GHPLGASGARIMTHLTHAIRRKNEQYAMGSACIGGGQGIAVLLENMK
Run BLAST on NCBI

transcript from alignment at scaffold_250:127575..137746-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00055107 ID=TCONS_00055107|Name=TCONS_00055107|organism=Clytia hemisphaerica|type=transcript|length=10172bp|location=Sequence derived from alignment at scaffold_250:127575..137746- (Clytia hemisphaerica)
TTTTCTAGTTATGATATTTCAATTTCAATCTAGTTAATAATCTTTTTCAA
TTTTAATAGTGCATCGAATAAATAGATTTAAAACAAAATGGCTTTGTCAA
GACCAGTTTACATTGTAGCTGCTAAGAGGACAGCATTTGGTGCTTTTGGT
GGAAAAGTCAAAGACCTTTCAGCAACAGTACTTGCAGAAAAAGCTACCAG
TGCTGCTTTGAAGGACATCAATTTGGACCCAGCTCATGTCCAGTCTGTCA
TCTTTGGTAATGTAATCCAGGTATAATTGACTATTTTAGTCGAAATTTTC
GATTTTAATTCATTTTGTGTGAATCGCCAATTAATAATTGATTGTTAATG
GAATTATATTGATCAGCAGTTAGCATGGAAGATTGACCAAAATTTTGGTG
AACTGAGAGGCGATTTCACAAAGTTAAGAAAGGAAGGAAGGTGTTTATCC
TCACATGACTAAAGGTTCAATCTCAAAATAAGTGTCTTGGAAAATTGGAA
ATCTTGCAATCCTGTTCTGCCTTTGAGATTGGCCATCGACTATATTCCTC
TACATGAAAAAAGGGCAATCTCTATCTCAAAGATGACCACCACAGTAAAA
CTCTAAATTTCATAAGGTATTAATTTTGAGATTAAACCTTAAGTCATGTG
AGGGATGGTGTGTACTCATACAATGTAATATGTTAATATAATTATATTTA
TTCATCAGCAATGGATTTCATCCTAGGTAAGGATATCTTTTAATTTGCTG
CCAGGGATGCAAAGGAGTGGGGGAAATTTGTCTGCTAAGGAGAACAGTGA
GAATAAACTTATTCAAGTGAGCTAGAATACAAACTGAAAGGTTTTATGAA
CTTATCAAAGTTTAGTGAGCTAGAAATCCCACCTTTTTCTGTTATTGTTT
TAAGCTGAGCTATGTTCTCTGATGACAGGCTTCTTCCAAAGCAGAAGCAT
GCAATCAAGAATTAAAATTCTTAACTTTGTCTGCTTCTAATCATAAGCTA
GGCAATGTTTTCAGGCTTTTGACATTTTTCTGAGAAGTATACGATATTGT
TTTGATACCTTGGGGTATGGTACTTTCCTTTTCATTTCACCAGTCGAAGC
AAATGGTCTAATCTAAAAAGTCTGTTACAATAGAAAAACTAAAAGGCTTG
AAATAATTTGCTAACTTTAAAATTTTGATTTTGAACTTTTAAATCAACCC
TTTTCTTGTAGTGGACAAGTATTCTATTTACAAGTGAAAAGGGTAAATCT
CAAAATTTTAAATTAGCAAAGCAAAATTAAAATGTCTTAATCTTCTCTAA
CACACTATTTATATTGGACTTTTTACCTCGATAGCCGCGACAGGTAAAAT
AATAGTTGCGATTCATGATATGCACCATTGCAATGTCTTCCGTTCCACCC
AGTAGCTCATTGGTTGAAAGTGACGTAAAATCAGTCAATACGTCACTTTT
AACCAATCAGCTACTGGGTGGAACGGAAGACATTGCAATGGTGCATATCA
TGAATAGCAGCCCTGTGACATTTAACTTTCTCATTTTCAGAGTTCATCAG
ACGCAGCATACTTAGCACGACATGCAGCTCTTGGTGCTGGTGTACCGCAA
GAAGCTACTTCGCTCACCACAAACCGCCTGTGTGGGTCTGGTTTCCAAGC
GGTCGTTAGTGCTGCTCAGGTTTGTGATAGCTAATTCTCAGATACCTTTT
TATGGTATTATTTCCTCCATTGTTACAATGTTTATGGGTTTTCCGAACTC
CTTGTTCTGGCATGATTTGGTGATCTAACTTCTTTCCGGACATTGTTCGA
CCCAAATAGCTTCATGTCCGACCCATTTTCATACTAAAGCAACCATGATC
TGAGACTTTGTCCGATCCACTTGAAATCGTTATTCCAAGCCTTGAATAAG
GAACCTGTTTTGTGATAACTAATCCCCAGAGACCTTTTCATGGCTGCCCA
AATTAGTTGTGGTTTGTAGTAAGGACTAAGACAATCTCTTTTCACTTTTT
TAGTCACGAAAATATGTAAAGATTCAGTATATAATATAATGAGTGCATAC
TAGTAGTAGTTTACACCCCTTTCTCACAGACCCGGTTGAACCCCCTTTCC
GACTGGAAAATATGATGGCCAAAACATCATCTCCCAGCAGAAAATTATAC
TCCAATTTCGTCGAAATCCGTTGAACGAATCCTCGCTGCAAAATATTGTC
CTATTTTTTCCATTCTTTCATTCATCTAAGGAACCTGCTCCTTGAAAACT
TTGATTTCTCATTTTACTTAACTTTTTCTTTTTTTTATAAGAAAGCTTTG
TATATTAATTGAATCGGTTGCCTTTAAGCTTGAATGTTCTTCAAGATGAC
TTTGATATCTTGGCTCATTTGCTTAAAGGCTGAAATCAAATCAATTAACT
CAATAACTAATCTTAATTGTGCTCAATTGTAGGGGAGGGGTGGAATAAGC
AGAGGATAGGTACTCTGGAAAGAAAGTCATAAAGTGGGGGGGTCATAATT
ATATGCTATAGGGTGATTTTGATAAATTTCGTTAAAGTGGCGGGTGTCTA
ATAAAATGGGGGGTTACTTTATCATTCCGACTTACGTTCCTTTATACTTA
ATAGTCATAAGTATGACATAGAAATTGCTAAATGTTTTATTTACTGGACA
ATACAGACATTCAAGACACACAGGGCATTCTTAGTCTTAAATTTTTGAAA
CTTTCGCTAAGAGTGTTTTTATTAGCATACACTTATCAAAGTCGTGTTCA
TTTTTTAGGAAATAGTTCTTGGAGATGCAGATATTGTAGTAGCTGGAGGC
TCAGAAAACATGAGTCAAGCGCCCTACGCCATCCGAAACGCCCGATTTGG
TATCACTTTGGGTGAAGGTCGAGAGGTAATTATGAATAGTTGAGTTATAC
GTTCTTTTTATTAAGGACTCTGACCATAGTCGAAAAATTGATTTTGGTAC
TTAAACTTAAAAGTTATGTTTTAGGTTCCGGAATACTTTTAACAAAGAAA
TGCCTTTTATAAATTTCTTTAATTTGAGTAATTGAGAATTTAATTGAAAA
AATGATGTTGTGAACTTTAAAAAGAAAAAGATATGTTGTATCACCCTCTA
TTGCAAAAAGTGCTTCGTTTTAACGGGTAATTAACCTTTTTCTTTCGAAT
TTTTTCAAACAAATATTAAAAATTCACTATCGCTAGAGAGCCCTTAAAAT
AAAACATTAGTAACATTTTTAGGGATGCTTTGGTTATTCATCGTCTTATC
CGTGATTTTCAGGCTTTAATGTTTATATCAAAATGTTTTTGTTTGTGATT
ATTTTATTATTATTATTATTATTATTATTATACTCCTTACTTATGGCTTA
AAAGAGGCTCAAATTCAATATTCTCTTAATCATTTTTGAAATCAAAGACT
TGAATTGTTCTTTATTGGTTCTTAGGTATTGGGCTTTTCCAGAAAAAAAC
GGTAAACCCCCTGTTGAGGAGGTCCATCATTTTGTGGCTGGAAATGCTGC
AACCCCCTGGAATTCCAGGCAATTTCAGGCTTAAACCCCTCTGGAATTCT
GAATTTTAGTAGGATTTAAAAAGCTACCCCTAAGGAATTCCAGTTATTTT
TGACAGATTTTTGTATCTCCCTATAGAATTCCGTCACATATCAAACCTTA
TCCCCTTGGACCTCCTCAACAGGGGTATACGGTTTTTTTCTGGAAAAGCC
CATTTGAGCGTCTTGTTGTTATATTAATTGTTCCTTTATAAAGTGCAGTG
CAAGCCCTTTTTAAGGGATTTCAAATTGTGATATCTCAAGACTCGACTTT
GGAAAAGACCACTAAACAAAAAGATTTGGAGATTACGCTCAGGATGATTA
AAGGAATGAGGCAAAAGATCTGAAACCTTCTGATTGACATTATTCTCATA
AACTATAATACCACTAATATCACTGTTTTAGAACTTTGAATACTTGCCTA
GTAATATTCTTGTAATAAGGTTTGAGAGAAATATCACATGTTTGCAAATA
CCGAAGCACAATTTCCCATTTTTGGATCTACCTCGGAGGTCCTTTTTAGA
TTAACCCATGTCTGTTCCTCTGTTCGTTCGTCTGTTACTAGCTTTTTTTC
TCGAGATCGGCTCATTAGTTTTTTTTCTAATTTTTTGCACAACGATGTAA
AGTGAGAATGCCCAAATTGTGTCGTAGCCTAATATTTTTGAAAAATAATA
TTTTTTGGGGCAAATCTGGTACAAAACCCACCCAAAATGTGCAAATTGGT
TTATTAGATTTTTAATTTTTTTACTCATCATGCTGCTATTTTGCTTTTGT
ACTGGACATTATTATCTTTCTTTTCTAATTCTATATCTATCTGATTCCAT
CACCTGTTAGGTCCATTCAGCATGTTGGCCTGTTATGATTGAATCAAACT
TATATACCGTGTGTTATGAAAATGAAAAGAATATGTAAAAAGATGGGCAA
AATCGAAATCGTTTTTACTTTATGATGATAGACAGTTCATGACAAAGTAA
ACTCTTCAAAGGTCACTCAAGGGGTTTTCTGACAAACTTTATGGGTTGTC
GCTAGGTTGCGGGTACTTGATAAAGTGGTTACCAAATTCCCTGAAACTCA
ATTTCTAATCTGAGAAACGGCCAGTGGCAAAAGTGCTTGGAATTCTGGCT
GATTGTTATGATTGGTTAAGAAATTTCTTTATTTAGATGGAAGATACACT
TTGGGCTGGTTTGACTGATTCCTACATCAAAACTCCCATGGGTATCACAG
CTGAAAACTTAGCCGCCAAATACGGAATCACTAGACTGGATGCTGACGAA
TTCGCTTTAGCTTCACAGGACAGATGGGCTAAAGGTATTTTATTGGTGCT
TTTCTTCACTAGGAGGCTCTTGTAATGCCTATTTTAGTTTAGTCACGAGA
GAGACTTGGTTTTTAGCAATGTTAAGATTTTGAAAACTAACTTACAATTG
TTACACGGTGTTTATTGCTGGCGCGATCTTCAGTCAATGCAGGTGTATTG
TAGATTCGGCTCTTCCAGAAAATGTCCGTACATGGGGGTGGAGGATATAT
TGTCCGGGTGGTAGAGCAAAATATCAAAATTTGCCTTGCTGTCCGGGAGG
TAAACTTGCTCTGTCCGGGGGTAATTTGGGTTGTCCCGGGGGTCTACTGA
TGCCTGTCCGGTGGGTAAAACCCGTTGTACGGGGGGTAAATAACTGAAAA
TTGTTATATACTCCACCCCCCCCCCCCTTTTCCCTTTTTTTTTAAAAAAA
AATTTTTTTTTTTTTCCCCCCCCCCCCCCCCCCATATTCAATTTTTTTCT
GGAAAAGCCCATTTTATTTCAATGAAATGTTATTTCAAATGTTTTTGGAC
TTATCCTGGGAAAAATACTCTGCCTCCTTTCCCGTTTGCAAATTTTCTCT
TTTTGCAACTCCCGAATCACCTTATTTATTGTTAGGAAATCTTTTTAGCT
GTCAAAAATAAAGTCCATTTTGCACGATATCCCCAGCTTTCTATATTAAC
CTCATTTCGGGATATTCGGGTATTTTCCGATCCTCGCCCCCTTTTATTAG
GCATCGGAATCCATTCGACGTTTTCGTACCCACTTTGAGACCCTCTTGAC
TTTCCACAAAATTTTATTGATCTCTCTTGGATTTCAGATTTTTTTATGCC
GGAACATCTCCCATTAATTTAAGAAGTATTTTTCTGACTTTTCTTCCTGA
ATACAGCACACAAAGAAGGAGCATTTGCTGACGAGATTGCACCATTAGAA
ATTCAAGTGAAACGAAAGACAGTCACTTTCGATACTGATGAACACCCAAG
GCCGGGCGTCACTATCGAGGCGTTACAAAAATTACCGCCCGTCTTCAAGA
AGAATGGTACAGTGTCGGCTGGAAATGCTTCGGTGAGCTTTTTGTTTTGT
TTGTCGCTTTTTTAAATTATCTGTACATTAATGATTCAATTTCACCAATC
GTTTGGTAAAGTCGCCATGGTAATTGTTGGTAAAGTGGCAAGTGGTCGTC
CGCCCGTCTGTCTGTTTGTTATCAGCTATTTCGGGATTTGATCATATCTT
TTTTGCACAAAGGAGTTCAATCACAATGCTCGAAATGTGACGCAGCCTAA
TTTCCAAAAAAAAATTCCGGCCGACAAAGCCATAAATGTGCCGACAACCG
TTTTTTGGACCTACCTCCGGGTGCCCCGGTGGAGGTCCTATAAATTAACC
CATGTCCGTTCGTTCGTCCGTCCGTCCGTCCGTCCGTCCGTCTGTTACCA
GCTTTTCTCAGGATTGGCTCATTAGTTTTTTTTTATTTTTGGCGCAATGA
TGCAAAATGGTAATGCCCAAAATGTGACGGAGCCCGATTTTCGAAAAAAT
TTATTTCCGGCTGAAATATACCGGAAAAACCGGTTTTTTGGCATTTTCTC
AAGATTTCATCATTAGTTTTTTCTGATTTTCTGCAAAAAGATGCGTATTA
GCAATGCGAAAAAATCTTTTCCGGTCGAAAATGCCGGAAATATGCCGGAA
ATCGCCATTTTTGCAGATTTTCATCGGACTTTTTCCTTATATTTCGTTGT
TTTTTCACACAAAAACATTATTAATAGCAATGCCCACCATGAAGCATGGT
TTAATCGTCAATAGAACTGAGTTTTGAAGCCGGAACTTTCTAAAAATCGC
CGGAGCAGCCCATTTTCGCCGGAAAAACGGTATTTCTTGATTTTCTCGAG
CTGTACTTTATATTTTTTTATGAAATTTTGCGCACTGATGCAAAATGATA
ATACCTAAAATGTGACGGAGCCCGATTTTCGGAAAAACATTTTTTTCCGG
CCGAAAAAGCCGGAAATATGCCGGAAATACTGTTTTTTTGGCATTTTCTC
GAGATTTTATCATTCGTTTTTTCTGATTTTTTGCACAAAGATGCGTATTA
ACAATCCCCAAAACATGACCGAGTCCGATTTTTGAGAAAAAAATCTTTCC
GGCAGAAAATGCCTGAAATATGCCGGAAATCGCCGTTTTCTGGGTTTCCA
TTGGGCTTTTTTCTTTTAAATGGTTGTTTTTTCATTCAAACACATTATTA
ATAGCAATGCCCACCATCAGGCATGTTTCAATTTTCAATAAAATTGAATT
TTGAAGCCGGAACTATTTAAAAATCTCCGGAACAACCTATTTTCGCTGGA
AAGACAGTATTTCTTGAATATCTCGAGCTGTACTATATATTATTTTATGA
AATTTTTCACACTGATGCAAAATGACAATACCTAAAATGTGATGGAGCTC
GATTTTCGAAAAACATTTTTTTCCGGCCGAAAATGCCGGAAATATGTCGG
AAAAACCGGTTTTTTGACATTTCCTCGAATTTTCATCTTTTGTTTTTTCT
GATTTTTTTGCAGAGAGATGCGTATTCGCAATGCTCAAAACATGACCGAG
TTCGATTTTTGAGAAAAAATTCTTCTGGTGGAAAATGCCGGAAATCGCCG
TTTTTGCAGATTTTCATTGGATTTTTTCCTTATATTTCCAATTTTTTTCA
CACAAAAACATTATTCATAACAATGCTCACCATCAAGCATGATTCGATTG
TCAATAAAACTGATTTTTGCGACCAGAACTTTCTATTTAGTTTTTCCTTA
CAACCCTTTCCTCTCCCTCCATCAACAATCAATGATGAATTTTTTGCGTT
ATGCATTTTCGCTATATTTTCTGACTGATTTTTCTCCTCGCATTGCTATC
TAACTTTCATCATCAGGTAGGTCCATTCAGCATCTAGCTTGTTGTTGTCT
TTTTCTCAAGATTTAATCATTAGTTTTATGATTTTTTGAGATGCGTATTG
AATATATGTTTTGAAAATCTTTTTCACATTGATGTTGTTCTGAGATCGAA
CAATCACTCGTGTGAAAATGGTAGTTAGAGCACAGTTACTGAAGAAGTCG
ATTATTTTTCTTCATTTCATGGTTCTATTTTTCGATTTTGTTTTATTTTT
TCTATTCGATAATTGTCCACTCCTTATATATTATCTTTTCAACGAGCGCG
AAACTTCCATTTCATTTAAATTCTAGCAAAAATTACCTTTTTCTCTGCAT
ATTATATTGAGACAGACTTTGCGTACTTCTAAATTTTATTTCAAATCTTA
GTTATTTCTAAAAAAACATCTTCATACGGCCAGTTTTGCAAAAATTATTC
CATTGCTATACACCTTTTCTACCGTAAACCACCACTTGCCGCGCGGGCAT
TTTTTTTGTCCGTTTTACCCACCTATAACCGTCCCAGTCTTTTTATCGCA
CCTTACTGTAAGACAATAGAAAAAAGTGTAAAAAAGAATTGTCACGAGTT
TAAGATGGTAAATTAAATAATAAAATGACACGCGCCTGACCACGCGACTA
CGGTCGAAAAGGTGTATTAAAAATCAATCCAATTTATAAATTTCAAATTC
TCTCCCTCTTTTCAAAACAGGGCATTTGTGATGGTGCAGCAGCATTGGTC
TTAGCATCGGAAGAAGCATGTAAAACGCATAACTTGAAACCGTTAGCGCG
TGTTGTTTCTTATGGAATCGCTGGTGTTGACCCGAGCATTATGGGTATCG
GACCTTCGCCTGCAATCAAGATTGCTTTGGAACGCGCCAAATTGTCGTTG
AACGATATGGCCTTGGTGGAGGTATGTATATTTTAATCTCTTAATTGAAT
CTTACATGAACCATACAGTGGAGCAGTTAGTGTTTATCAATCTTGACTTC
CGTCTAGGAGGTCGGTGTTTGGCACACAGATTTCTGTAAAGTCCGAAGGG
CTAGATGTCGTGCTTTAAGCTCTTCCAAGCAAAAAAAAATTGAATATCGC
AAAAAATATTGCTGCGAATGTTTTCAAAAACCTGCGAAGCTTCTTGCTGG
TCAAGCGCTGAAATTCTATTGTAATATCACGTGACCTATGTAGGATTTCC
TACCTAACCTCGGCACACTTATCAGCCAAAGCACGACATCTCTAGCCCTT
TGGGCTTTATAAAATTATGGAATCGCTGATGTTGACCCGAGCATTATGGG
TATCGGACCTTCACCTGCAATCAAGATTGCTTTGGAACGCGCCAAATTGT
CGTTGAACGATATGGCCTTGGTGGAGGTATGCATATTTTAATCTCTTAAT
CAAATCTAACATAAACCATATAGTAGCACAATAATGTAGTACTTCCGTCT
AGGAGATCGGGGTTTGATTCGACATTCGTTGCTCTTATTCACTTGAAAGT
GAATGTACCTTCGCCCGGGCCAATCCATAGCATTTTGTCTATCGGTGACT
GCTCTAGGTATCAATTCCACAATACACTGTGGATGAAGTGAGACTGTGCC
GGTCTTGGCACCGTATTAACGCACTTGATCAAAAATCGTGTGTCAGTATC
TCGCAAGCTGGCAAGCTTAAAGACGTCTCTAACGAGACGACTCCTAGACC
GATCAATACAGAACCGTATATCCTTTGTAAGGAGAAGCCAGTCATAATCG
TAGAGACATTGCGTTTTTTCGTATCAGAAAAGAGTTTGATTTTCGTATTA
CATACTCGTATATTTATATTTTGAATTATGCTTTGTAAGTCTATGCGAGT
CGGAAGACGGTGCTTAATAGACGATATTTATACTTGGAAATATCTTCAGA
AATAATAAGTAATGGAAGGGATCATTCGAGTAGTATTTCAGTGGGAATCG
AACTCGGACCTATTTTACACCTATTTTACTTTATTTAACATGGATTAAAA
ACGACTCCAGTCTGTAGGAAAGAAATACTGTACATTAAAATCATAAATTT
TCTTATTTATATCGGTTAGGTCTCGCTTAGACGGCCCACTTTTAGTCCTG
CATATTCGAATTGTGAGTTAAAGTTAGCAGAAAGTTGGCTGTCTAAAATC
AATACATTACCCTCTTTTGACGTCAATGCAATAACTTCTTTCAATCTTTT
TCAAGCAAATATTTTCTTACTTTAGGTCAACGAAGCCTTCGCTCCACAAT
TCATCGCCGTTGAGAAAGATCTCGGCCTCGATCGATCCATCACCAACGCC
TGTGGCGGCGCCATTGCTCTCGGTCACCCACTTGGTGCGTCTGGCGCCCG
CATCATGACCCATTTAACGCACGCCATCCGTCGAAAGAACGAGCAGTATG
CCATGGGCTCCGCCTGTATCGGTGGCGGCCAAGGTATTGCAGTTCTATTG
GAAAACATGAAATAAAGGACTT

Coding sequence (CDS) from alignment at scaffold_250:127575..137746-

>TCONS_00055107 ID=TCONS_00055107|Name=TCONS_00055107|organism=Clytia hemisphaerica|type=CDS|length=8358bp|location=Sequence derived from alignment at scaffold_250:127575..137746- (Clytia hemisphaerica)
GTCAACGAAGCCTTCGCTCCACAATTCATCGCCGTTGAGAAAGATCTCGG
CCTCGATCGATCCATCACCAACGCCTGTGGCGGCGCCATTGCTCTCGGTC
ACCCACTTGGTGCGTCTGGCGCCCGCATCATGACCCATTTAACGCACGCC
ATCCGTCGAAAGAACGAGCAGTATGCCATGGGCTCCGCCTGTATCGGTGG
CGGCCAAGGTATTGCAGTTCTATTGGAAAACATGAAATAAGGCATTTGTG
ATGGTGCAGCAGCATTGGTCTTAGCATCGGAAGAAGCATGTAAAACGCAT
AACTTGAAACCGTTAGCGCGTGTTGTTTCTTATGGAATCGCTGGTGTTGA
CCCGAGCATTATGGGTATCGGACCTTCGCCTGCAATCAAGATTGCTTTGG
AACGCGCCAAATTGTCGTTGAACGATATGGCCTTGGTGGAGCACACAAAG
AAGGAGCATTTGCTGACGAGATTGCACCATTAGAAATTCAAGTGAAACGA
AAGACAGTCACTTTCGATACTGATGAACACCCAAGGCCGGGCGTCACTAT
CGAGGCGTTACAAAAATTACCGCCCGTCTTCAAGAAGAATGGTACAGTGT
CGGCTGGAAATGCTTCGATGGAAGATACACTTTGGGCTGGTTTGACTGAT
TCCTACATCAAAACTCCCATGGGTATCACAGCTGAAAACTTAGCCGCCAA
ATACGGAATCACTAGACTGGATGCTGACGAATTCGCTTTAGCTTCACAGG
ACAGATGGGCTAAAGGAAATAGTTCTTGGAGATGCAGATATTGTAGTAGC
TGGAGGCTCAGAAAACATGAGTCAAGCGCCCTACGCCATCCGAAACGCCC
GATTTGGTATCACTTTGGGTGAAGGTCGAGAGAGTTCATCAGACGCAGCA
TACTTAGCACGACATGCAGCTCTTGGTGCTGGTGTACCGCAAGAAGCTAC
TTCGCTCACCACAAACCGCCTGTGTGGGTCTGGTTTCCAAGCGGTCGTTA
GTGCTGCTCAGATGGCTTTGTCAAGACCAGTTTACATTGTAGCTGCTAAG
AGGACAGCATTTGGTGCTTTTGGTGGAAAAGTCAAAGACCTTTCAGCAAC
AGTACTTGCAGAAAAAGCTACCAGTGCTGCTTTGAAGGACATCAATTTGG
ACCCAGCTCATGTCCAGTCTGTCATCTTTGGTAATGTAATCCAGGTCAAC
GAAGCCTTCGCTCCACAATTCATCGCCGTTGAGAAAGATCTCGGCCTCGA
TCGATCCATCACCAACGCCTGTGGCGGCGCCATTGCTCTCGGTCACCCAC
TTGGTGCGTCTGGCGCCCGCATCATGACCCATTTAACGCACGCCATCCGT
CGAAAGAACGAGCAGTATGCCATGGGCTCCGCCTGTATCGGTGGCGGCCA
AGGTATTGCAGTTCTATTGGAAAACATGAAATAAGGCATTTGTGATGGTG
CAGCAGCATTGGTCTTAGCATCGGAAGAAGCATGTAAAACGCATAACTTG
AAACCGTTAGCGCGTGTTGTTTCTTATGGAATCGCTGGTGTTGACCCGAG
CATTATGGGTATCGGACCTTCGCCTGCAATCAAGATTGCTTTGGAACGCG
CCAAATTGTCGTTGAACGATATGGCCTTGGTGGAGCACACAAAGAAGGAG
CATTTGCTGACGAGATTGCACCATTAGAAATTCAAGTGAAACGAAAGACA
GTCACTTTCGATACTGATGAACACCCAAGGCCGGGCGTCACTATCGAGGC
GTTACAAAAATTACCGCCCGTCTTCAAGAAGAATGGTACAGTGTCGGCTG
GAAATGCTTCGATGGAAGATACACTTTGGGCTGGTTTGACTGATTCCTAC
ATCAAAACTCCCATGGGTATCACAGCTGAAAACTTAGCCGCCAAATACGG
AATCACTAGACTGGATGCTGACGAATTCGCTTTAGCTTCACAGGACAGAT
GGGCTAAAGGAAATAGTTCTTGGAGATGCAGATATTGTAGTAGCTGGAGG
CTCAGAAAACATGAGTCAAGCGCCCTACGCCATCCGAAACGCCCGATTTG
GTATCACTTTGGGTGAAGGTCGAGAGAGTTCATCAGACGCAGCATACTTA
GCACGACATGCAGCTCTTGGTGCTGGTGTACCGCAAGAAGCTACTTCGCT
CACCACAAACCGCCTGTGTGGGTCTGGTTTCCAAGCGGTCGTTAGTGCTG
CTCAGATGGCTTTGTCAAGACCAGTTTACATTGTAGCTGCTAAGAGGACA
GCATTTGGTGCTTTTGGTGGAAAAGTCAAAGACCTTTCAGCAACAGTACT
TGCAGAAAAAGCTACCAGTGCTGCTTTGAAGGACATCAATTTGGACCCAG
CTCATGTCCAGTCTGTCATCTTTGGTAATGTAATCCAGGTCAACGAAGCC
TTCGCTCCACAATTCATCGCCGTTGAGAAAGATCTCGGCCTCGATCGATC
CATCACCAACGCCTGTGGCGGCGCCATTGCTCTCGGTCACCCACTTGGTG
CGTCTGGCGCCCGCATCATGACCCATTTAACGCACGCCATCCGTCGAAAG
AACGAGCAGTATGCCATGGGCTCCGCCTGTATCGGTGGCGGCCAAGGTAT
TGCAGTTCTATTGGAAAACATGAAATAAGGCATTTGTGATGGTGCAGCAG
CATTGGTCTTAGCATCGGAAGAAGCATGTAAAACGCATAACTTGAAACCG
TTAGCGCGTGTTGTTTCTTATGGAATCGCTGGTGTTGACCCGAGCATTAT
GGGTATCGGACCTTCGCCTGCAATCAAGATTGCTTTGGAACGCGCCAAAT
TGTCGTTGAACGATATGGCCTTGGTGGAGCACACAAAGAAGGAGCATTTG
CTGACGAGATTGCACCATTAGAAATTCAAGTGAAACGAAAGACAGTCACT
TTCGATACTGATGAACACCCAAGGCCGGGCGTCACTATCGAGGCGTTACA
AAAATTACCGCCCGTCTTCAAGAAGAATGGTACAGTGTCGGCTGGAAATG
CTTCGATGGAAGATACACTTTGGGCTGGTTTGACTGATTCCTACATCAAA
ACTCCCATGGGTATCACAGCTGAAAACTTAGCCGCCAAATACGGAATCAC
TAGACTGGATGCTGACGAATTCGCTTTAGCTTCACAGGACAGATGGGCTA
AAGGAAATAGTTCTTGGAGATGCAGATATTGTAGTAGCTGGAGGCTCAGA
AAACATGAGTCAAGCGCCCTACGCCATCCGAAACGCCCGATTTGGTATCA
CTTTGGGTGAAGGTCGAGAGAGTTCATCAGACGCAGCATACTTAGCACGA
CATGCAGCTCTTGGTGCTGGTGTACCGCAAGAAGCTACTTCGCTCACCAC
AAACCGCCTGTGTGGGTCTGGTTTCCAAGCGGTCGTTAGTGCTGCTCAGA
TGGCTTTGTCAAGACCAGTTTACATTGTAGCTGCTAAGAGGACAGCATTT
GGTGCTTTTGGTGGAAAAGTCAAAGACCTTTCAGCAACAGTACTTGCAGA
AAAAGCTACCAGTGCTGCTTTGAAGGACATCAATTTGGACCCAGCTCATG
TCCAGTCTGTCATCTTTGGTAATGTAATCCAGGTCAACGAAGCCTTCGCT
CCACAATTCATCGCCGTTGAGAAAGATCTCGGCCTCGATCGATCCATCAC
CAACGCCTGTGGCGGCGCCATTGCTCTCGGTCACCCACTTGGTGCGTCTG
GCGCCCGCATCATGACCCATTTAACGCACGCCATCCGTCGAAAGAACGAG
CAGTATGCCATGGGCTCCGCCTGTATCGGTGGCGGCCAAGGTATTGCAGT
TCTATTGGAAAACATGAAATAAGGCATTTGTGATGGTGCAGCAGCATTGG
TCTTAGCATCGGAAGAAGCATGTAAAACGCATAACTTGAAACCGTTAGCG
CGTGTTGTTTCTTATGGAATCGCTGGTGTTGACCCGAGCATTATGGGTAT
CGGACCTTCGCCTGCAATCAAGATTGCTTTGGAACGCGCCAAATTGTCGT
TGAACGATATGGCCTTGGTGGAGCACACAAAGAAGGAGCATTTGCTGACG
AGATTGCACCATTAGAAATTCAAGTGAAACGAAAGACAGTCACTTTCGAT
ACTGATGAACACCCAAGGCCGGGCGTCACTATCGAGGCGTTACAAAAATT
ACCGCCCGTCTTCAAGAAGAATGGTACAGTGTCGGCTGGAAATGCTTCGA
TGGAAGATACACTTTGGGCTGGTTTGACTGATTCCTACATCAAAACTCCC
ATGGGTATCACAGCTGAAAACTTAGCCGCCAAATACGGAATCACTAGACT
GGATGCTGACGAATTCGCTTTAGCTTCACAGGACAGATGGGCTAAAGGAA
ATAGTTCTTGGAGATGCAGATATTGTAGTAGCTGGAGGCTCAGAAAACAT
GAGTCAAGCGCCCTACGCCATCCGAAACGCCCGATTTGGTATCACTTTGG
GTGAAGGTCGAGAGAGTTCATCAGACGCAGCATACTTAGCACGACATGCA
GCTCTTGGTGCTGGTGTACCGCAAGAAGCTACTTCGCTCACCACAAACCG
CCTGTGTGGGTCTGGTTTCCAAGCGGTCGTTAGTGCTGCTCAGATGGCTT
TGTCAAGACCAGTTTACATTGTAGCTGCTAAGAGGACAGCATTTGGTGCT
TTTGGTGGAAAAGTCAAAGACCTTTCAGCAACAGTACTTGCAGAAAAAGC
TACCAGTGCTGCTTTGAAGGACATCAATTTGGACCCAGCTCATGTCCAGT
CTGTCATCTTTGGTAATGTAATCCAGGTCAACGAAGCCTTCGCTCCACAA
TTCATCGCCGTTGAGAAAGATCTCGGCCTCGATCGATCCATCACCAACGC
CTGTGGCGGCGCCATTGCTCTCGGTCACCCACTTGGTGCGTCTGGCGCCC
GCATCATGACCCATTTAACGCACGCCATCCGTCGAAAGAACGAGCAGTAT
GCCATGGGCTCCGCCTGTATCGGTGGCGGCCAAGGTATTGCAGTTCTATT
GGAAAACATGAAATAAGGCATTTGTGATGGTGCAGCAGCATTGGTCTTAG
CATCGGAAGAAGCATGTAAAACGCATAACTTGAAACCGTTAGCGCGTGTT
GTTTCTTATGGAATCGCTGGTGTTGACCCGAGCATTATGGGTATCGGACC
TTCGCCTGCAATCAAGATTGCTTTGGAACGCGCCAAATTGTCGTTGAACG
ATATGGCCTTGGTGGAGCACACAAAGAAGGAGCATTTGCTGACGAGATTG
CACCATTAGAAATTCAAGTGAAACGAAAGACAGTCACTTTCGATACTGAT
GAACACCCAAGGCCGGGCGTCACTATCGAGGCGTTACAAAAATTACCGCC
CGTCTTCAAGAAGAATGGTACAGTGTCGGCTGGAAATGCTTCGATGGAAG
ATACACTTTGGGCTGGTTTGACTGATTCCTACATCAAAACTCCCATGGGT
ATCACAGCTGAAAACTTAGCCGCCAAATACGGAATCACTAGACTGGATGC
TGACGAATTCGCTTTAGCTTCACAGGACAGATGGGCTAAAGGAAATAGTT
CTTGGAGATGCAGATATTGTAGTAGCTGGAGGCTCAGAAAACATGAGTCA
AGCGCCCTACGCCATCCGAAACGCCCGATTTGGTATCACTTTGGGTGAAG
GTCGAGAGAGTTCATCAGACGCAGCATACTTAGCACGACATGCAGCTCTT
GGTGCTGGTGTACCGCAAGAAGCTACTTCGCTCACCACAAACCGCCTGTG
TGGGTCTGGTTTCCAAGCGGTCGTTAGTGCTGCTCAGATGGCTTTGTCAA
GACCAGTTTACATTGTAGCTGCTAAGAGGACAGCATTTGGTGCTTTTGGT
GGAAAAGTCAAAGACCTTTCAGCAACAGTACTTGCAGAAAAAGCTACCAG
TGCTGCTTTGAAGGACATCAATTTGGACCCAGCTCATGTCCAGTCTGTCA
TCTTTGGTAATGTAATCCAGGTCAACGAAGCCTTCGCTCCACAATTCATC
GCCGTTGAGAAAGATCTCGGCCTCGATCGATCCATCACCAACGCCTGTGG
CGGCGCCATTGCTCTCGGTCACCCACTTGGTGCGTCTGGCGCCCGCATCA
TGACCCATTTAACGCACGCCATCCGTCGAAAGAACGAGCAGTATGCCATG
GGCTCCGCCTGTATCGGTGGCGGCCAAGGTATTGCAGTTCTATTGGAAAA
CATGAAATAAGGCATTTGTGATGGTGCAGCAGCATTGGTCTTAGCATCGG
AAGAAGCATGTAAAACGCATAACTTGAAACCGTTAGCGCGTGTTGTTTCT
TATGGAATCGCTGGTGTTGACCCGAGCATTATGGGTATCGGACCTTCGCC
TGCAATCAAGATTGCTTTGGAACGCGCCAAATTGTCGTTGAACGATATGG
CCTTGGTGGAGCACACAAAGAAGGAGCATTTGCTGACGAGATTGCACCAT
TAGAAATTCAAGTGAAACGAAAGACAGTCACTTTCGATACTGATGAACAC
CCAAGGCCGGGCGTCACTATCGAGGCGTTACAAAAATTACCGCCCGTCTT
CAAGAAGAATGGTACAGTGTCGGCTGGAAATGCTTCGATGGAAGATACAC
TTTGGGCTGGTTTGACTGATTCCTACATCAAAACTCCCATGGGTATCACA
GCTGAAAACTTAGCCGCCAAATACGGAATCACTAGACTGGATGCTGACGA
ATTCGCTTTAGCTTCACAGGACAGATGGGCTAAAGGAAATAGTTCTTGGA
GATGCAGATATTGTAGTAGCTGGAGGCTCAGAAAACATGAGTCAAGCGCC
CTACGCCATCCGAAACGCCCGATTTGGTATCACTTTGGGTGAAGGTCGAG
AGAGTTCATCAGACGCAGCATACTTAGCACGACATGCAGCTCTTGGTGCT
GGTGTACCGCAAGAAGCTACTTCGCTCACCACAAACCGCCTGTGTGGGTC
TGGTTTCCAAGCGGTCGTTAGTGCTGCTCAGATGGCTTTGTCAAGACCAG
TTTACATTGTAGCTGCTAAGAGGACAGCATTTGGTGCTTTTGGTGGAAAA
GTCAAAGACCTTTCAGCAACAGTACTTGCAGAAAAAGCTACCAGTGCTGC
TTTGAAGGACATCAATTTGGACCCAGCTCATGTCCAGTCTGTCATCTTTG
GTAATGTAATCCAGGTCAACGAAGCCTTCGCTCCACAATTCATCGCCGTT
GAGAAAGATCTCGGCCTCGATCGATCCATCACCAACGCCTGTGGCGGCGC
CATTGCTCTCGGTCACCCACTTGGTGCGTCTGGCGCCCGCATCATGACCC
ATTTAACGCACGCCATCCGTCGAAAGAACGAGCAGTATGCCATGGGCTCC
GCCTGTATCGGTGGCGGCCAAGGTATTGCAGTTCTATTGGAAAACATGAA
ATAAGGCATTTGTGATGGTGCAGCAGCATTGGTCTTAGCATCGGAAGAAG
CATGTAAAACGCATAACTTGAAACCGTTAGCGCGTGTTGTTTCTTATGGA
ATCGCTGGTGTTGACCCGAGCATTATGGGTATCGGACCTTCGCCTGCAAT
CAAGATTGCTTTGGAACGCGCCAAATTGTCGTTGAACGATATGGCCTTGG
TGGAGCACACAAAGAAGGAGCATTTGCTGACGAGATTGCACCATTAGAAA
TTCAAGTGAAACGAAAGACAGTCACTTTCGATACTGATGAACACCCAAGG
CCGGGCGTCACTATCGAGGCGTTACAAAAATTACCGCCCGTCTTCAAGAA
GAATGGTACAGTGTCGGCTGGAAATGCTTCGATGGAAGATACACTTTGGG
CTGGTTTGACTGATTCCTACATCAAAACTCCCATGGGTATCACAGCTGAA
AACTTAGCCGCCAAATACGGAATCACTAGACTGGATGCTGACGAATTCGC
TTTAGCTTCACAGGACAGATGGGCTAAAGGAAATAGTTCTTGGAGATGCA
GATATTGTAGTAGCTGGAGGCTCAGAAAACATGAGTCAAGCGCCCTACGC
CATCCGAAACGCCCGATTTGGTATCACTTTGGGTGAAGGTCGAGAGAGTT
CATCAGACGCAGCATACTTAGCACGACATGCAGCTCTTGGTGCTGGTGTA
CCGCAAGAAGCTACTTCGCTCACCACAAACCGCCTGTGTGGGTCTGGTTT
CCAAGCGGTCGTTAGTGCTGCTCAGATGGCTTTGTCAAGACCAGTTTACA
TTGTAGCTGCTAAGAGGACAGCATTTGGTGCTTTTGGTGGAAAAGTCAAA
GACCTTTCAGCAACAGTACTTGCAGAAAAAGCTACCAGTGCTGCTTTGAA
GGACATCAATTTGGACCCAGCTCATGTCCAGTCTGTCATCTTTGGTAATG
TAATCCAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034715XLOC_034715Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00055107-proteinTCONS_00055107-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00055107-exon-scaffold_250-1575043694:137477..137746TCONS_00055107-exon-scaffold_250-1575043694:137477..137746Clytia hemisphaericaexon
TCONS_00055107-exon-scaffold_250-1575043694:136078..136206TCONS_00055107-exon-scaffold_250-1575043694:136078..136206Clytia hemisphaericaexon
TCONS_00055107-exon-scaffold_250-1575043694:134872..134988TCONS_00055107-exon-scaffold_250-1575043694:134872..134988Clytia hemisphaericaexon
TCONS_00055107-exon-scaffold_250-1575043694:132913..133060TCONS_00055107-exon-scaffold_250-1575043694:132913..133060Clytia hemisphaericaexon
TCONS_00055107-exon-scaffold_250-1575043694:131865..132040TCONS_00055107-exon-scaffold_250-1575043694:131865..132040Clytia hemisphaericaexon
TCONS_00055107-exon-scaffold_250-1575043694:129126..129326TCONS_00055107-exon-scaffold_250-1575043694:129126..129326Clytia hemisphaericaexon
TCONS_00055107-exon-scaffold_250-1575043694:127575..127821TCONS_00055107-exon-scaffold_250-1575043694:127575..127821Clytia hemisphaericaexon
TCONS_00055107-exon-scaffold_250-1510915933:137477..137746TCONS_00055107-exon-scaffold_250-1510915933:137477..137746Clytia hemisphaericaexon
TCONS_00055107-exon-scaffold_250-1510915933:136078..136206TCONS_00055107-exon-scaffold_250-1510915933:136078..136206Clytia hemisphaericaexon
TCONS_00055107-exon-scaffold_250-1510915933:134872..134988TCONS_00055107-exon-scaffold_250-1510915933:134872..134988Clytia hemisphaericaexon
TCONS_00055107-exon-scaffold_250-1510915933:132913..133060TCONS_00055107-exon-scaffold_250-1510915933:132913..133060Clytia hemisphaericaexon
TCONS_00055107-exon-scaffold_250-1510915933:131865..132040TCONS_00055107-exon-scaffold_250-1510915933:131865..132040Clytia hemisphaericaexon
TCONS_00055107-exon-scaffold_250-1510915933:129126..129326TCONS_00055107-exon-scaffold_250-1510915933:129126..129326Clytia hemisphaericaexon
TCONS_00055107-exon-scaffold_250-1510915933:127575..127821TCONS_00055107-exon-scaffold_250-1510915933:127575..127821Clytia hemisphaericaexon
TCONS_00055107-exon-scaffold_250-1491911889:137477..137746TCONS_00055107-exon-scaffold_250-1491911889:137477..137746Clytia hemisphaericaexon
TCONS_00055107-exon-scaffold_250-1491911889:136078..136206TCONS_00055107-exon-scaffold_250-1491911889:136078..136206Clytia hemisphaericaexon
TCONS_00055107-exon-scaffold_250-1491911889:134872..134988TCONS_00055107-exon-scaffold_250-1491911889:134872..134988Clytia hemisphaericaexon
TCONS_00055107-exon-scaffold_250-1491911889:132913..133060TCONS_00055107-exon-scaffold_250-1491911889:132913..133060Clytia hemisphaericaexon
TCONS_00055107-exon-scaffold_250-1491911889:131865..132040TCONS_00055107-exon-scaffold_250-1491911889:131865..132040Clytia hemisphaericaexon
TCONS_00055107-exon-scaffold_250-1491911889:129126..129326TCONS_00055107-exon-scaffold_250-1491911889:129126..129326Clytia hemisphaericaexon
TCONS_00055107-exon-scaffold_250-1491911889:127575..127821TCONS_00055107-exon-scaffold_250-1491911889:127575..127821Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_250supercontigscaffold_250:127575..137746 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
291.023	295.432	408.473	443.334	232.213	187.037	197.075	233.098	264.662	323.297	347.378	230.148	155.063	169.959	217.511	245.064	284.423	241.609	76.5807	91.9134	118.229	124.903	138.622	125.411	170.05	160.682	185.887	158.399	156.853	131.178
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR020616Thiolase_N
IPR016039Thiolase-like
IPR020617Thiolase_C
IPR002155Thiolase
IPR020610Thiolase_AS
IPR020613Thiolase_CS
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016747transferase activity, transferring acyl groups other than amino-acyl groups
GO:0003824catalytic activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008152 metabolic process
molecular_function GO:0003824 catalytic activity
molecular_function GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups
Blast
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BLAST of TCONS_00055107 vs. Swiss-Prot (Human)
Match: THIM (3-ketoacyl-CoA thiolase, mitochondrial OS=Homo sapiens GN=ACAA2 PE=1 SV=2)

HSP 1 Score: 478.404 bits (1230), Expect = 1.231e-166
Identity = 236/395 (59.75%), Postives = 301/395 (76.20%), Query Frame = 1 
Query:   88 MALSRPVYIVAAKRTAFGAFGGKVKDLSATVLAEKATSAALKDINLDPAHVQSVIFGNVIQSSSDXXXXXXXXXXXXXVPQEATSLTTNRLCGSGFQAVVSAAQEIVLGDADIVVAGGSENMSQAPYAIRNARFGITLGEGREMEDTLWAGLTDSYIKTPMGITAENLAAKYGITRLDADEFALASQDRWAKAHKEGAFADEIAPLEIQVKRKTVTFDTDEHPRPGVTIEALQKLPPVFKKNGTVSAGNASGICDGAAALVLASEEACKTHNLKPLARVVSYGIAGVDPSIMGIGPSPAIKIALERAKLSLNDMALVEVNEAFAPQFIAVEKDLGLDRSITNACGGAIALGHPLGASGARIMTHLTHAIRRKNEQYAMGSACIGGGQGIAVLLEN 1272
            MAL R V++VAAKRT FGA+GG +KD +AT L+E A  AAL    + P  V SVI GNV+QSSSDA YLARH  L  G+P+E  +LT NRLCGSGFQ++V+  QEI + +A++V+ GG+E+MSQAPY +RN RFG  LG   ++ED+LW  LTD +++ PM +TAENLA K+ I+R + D++AL SQ RW  A+  G F DE+AP+E++ K+   T   DEH RP  T+E LQKLPPVFKK+GTV+AGNASG+ DGA A+++ASE+A K HN  PLAR+V Y ++G DPSIMGIGP PAI  AL++A LSL DM LVEVNEAFAPQ++AVE+ L LD S TN  GGAIALGHPLG SG+RI  HL H +RR+  +YA+GSACIGGGQGIAV++++
Sbjct:    1 MALLRGVFVVAAKRTPFGAYGGLLKDFTATDLSEFAAKAALSAGKVSPETVDSVIMGNVLQSSSDAIYLARHVGLRVGIPKETPALTINRLCGSGFQSIVNGCQEICVKEAEVVLCGGTESMSQAPYCVRNVRFGTKLGSDIKLEDSLWVSLTDQHVQLPMAMTAENLAVKHKISREECDKYALQSQQRWKAANDAGYFNDEMAPIEVKTKKGKQTMQVDEHARPQTTLEQLQKLPPVFKKDGTVTAGNASGVADGAGAVIIASEDAVKKHNFTPLARIVGYFVSGCDPSIMGIGPVPAISGALKKAGLSLKDMDLVEVNEAFAPQYLAVERSLDLDISKTNVNGGAIALGHPLGGSGSRITAHLVHELRRRGGKYAVGSACIGGGQGIAVIIQS 395
The following BLAST results are available for this feature:
BLAST of TCONS_00055107 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
THIM1.231e-16659.753-ketoacyl-CoA thiolase, mitochondrial OS=Homo sap... [more]
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