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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00055131 ID=TCONS_00055131|Name=TCONS_00055131|organism=Clytia hemisphaerica|type=transcript|length=1143bp
CAGGTCTACACACACCCGGTCAGATGAAGGAAAACGACGGAGGAATAAGA
AGAAGAGTTGCAAAAGCAAATCAAAGAAACGCAGACTTTATGACCAAAAG
CTGGAAGAACAATTTGATAAAGACAAGAAAATCAGAAAGCTTGAAAGTGA
AAAAGCTTTATTGACCATAGCGTTGAGATCAGCAACTCGTAAGCTACCCA
TCCCAGTCACACCACGATATAGTTTGCCGAAGTCAGTTTTGGATCGATCT
CGTAGTAAGGCATCAGCCATCAATCAAACGTTAAGAGTTTCTGTCACAGA
GTTCAACAAAAGAGAACTGCAAATTCTACCTGGAACTATTGGAAGTGGTG
CATATGGTAGTCTTAAAATTGGAAAGCTTCCAAACTTTCAGCAATCAGTT
GCAGTGAAGGAAATTACTGGAAGGGATACTCGACTTGAAACGTTTGTAGA
AGCAAAGCTTTTGTCACTCTTGAATGGACACAAAAATCTCCCCCTCCTCT
TTGGATGGGTTAGCCCTAACATTATTTTATTGGAATTCATCGGTAACGAA
ACAGTCCCAAGTCCTACACTCAGAGAGCTTCTCCGTCAAGATTTGAATAT
TCAGTGGCTTGATCTTGTATTGGACTTGTGCTTGGCCATGCAATACATTC
ACAATAAAGGAGTGTTGCATAATGACCTTCACCCAAACAACATCCTTATT
CGTGATCGAAAGTACttaaaaatcattgattttGGTAAGGCGTGTTTGAT
CGAAGATCCAGTAGTGTATGATATTAAATCTGGGAGTGATAAGCAAAAAT
TATATAACCAAAGGCATATTCATCTTGCCCATGAACTTCGCAATGTCCCG
AATTCTACCCAATCAATTAAGAGTGATATTTACTCTCTTGGATACAATAT
TGGATTGATAAGTAAttcaactaaaaatgaaaagttatCTCTCATTGCTC
ACGATTTACAAAGCATTTCACCTGAAGGGCGACCCGGTATACCAGAAACA
ATCAAACGAATCTGCTTATTGAAGCATAAAATTGGCTGCAATCAAtgtgt
ttttttatctttgggCTTAAATAATTCTTGTTTTATTGGGAACGTTTGCT
GAATATTTTAACgtgaaaaatgattgaaataatTTGATGCGGA Run BLAST on NCBI protein sequence of TCONS_00055131-protein >TCONS_00055131-protein ID=TCONS_00055131-protein|Name=TCONS_00055131-protein|organism=Clytia hemisphaerica|type=polypeptide|length=366bp
RSTHTRSDEGKRRRNKKKSCKSKSKKRRLYDQKLEEQFDKDKKIRKLESE
KALLTIALRSATRKLPIPVTPRYSLPKSVLDRSRSKASAINQTLRVSVTE
FNKRELQILPGTIGSGAYGSLKIGKLPNFQQSVAVKEITGRDTRLETFVE
AKLLSLLNGHKNLPLLFGWVSPNIILLEFIGNETVPSPTLRELLRQDLNI
QWLDLVLDLCLAMQYIHNKGVLHNDLHPNNILIRDRKYLKIIDFGKACLI
EDPVVYDIKSGSDKQKLYNQRHIHLAHELRNVPNSTQSIKSDIYSLGYNI
GLISNSTKNEKLSLIAHDLQSISPEGRPGIPETIKRICLLKHKIGCNQCV
FLSLGLNNSCFIGNVC Run BLAST on NCBI transcript from alignment at scaffold_250:262210..263352 Legend: exonthree_prime_UTRCDSfive_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00055131 ID=TCONS_00055131|Name=TCONS_00055131|organism=Clytia hemisphaerica|type=transcript|length=1143bp|location=Sequence derived from alignment at scaffold_250:262210..263352 (Clytia hemisphaerica)
TCCGCATCAAattatttcaatcatttttcacGTTAAAATATTCAGCAAAC
GTTCCCAATAAAACAAGAATTATTTAAGcccaaagataaaaaaacacaTT
GATTGCAGCCAATTTTATGCTTCAATAAGCAGATTCGTTTGATTGTTTCT
GGTATACCGGGTCGCCCTTCAGGTGAAATGCTTTGTAAATCGTGAGCAAT
GAGAGataacttttcatttttagttgaaTTACTTATCAATCCAATATTGT
ATCCAAGAGAGTAAATATCACTCTTAATTGATTGGGTAGAATTCGGGACA
TTGCGAAGTTCATGGGCAAGATGAATATGCCTTTGGTTATATAATTTTTG
CTTATCACTCCCAGATTTAATATCATACACTACTGGATCTTCGATCAAAC
ACGCCTTACCaaaatcaatgatttttaaGTACTTTCGATCACGAATAAGG
ATGTTGTTTGGGTGAAGGTCATTATGCAACACTCCTTTATTGTGAATGTA
TTGCATGGCCAAGCACAAGTCCAATACAAGATCAAGCCACTGAATATTCA
AATCTTGACGGAGAAGCTCTCTGAGTGTAGGACTTGGGACTGTTTCGTTA
CCGATGAATTCCAATAAAATAATGTTAGGGCTAACCCATCCAAAGAGGAG
GGGGAGATTTTTGTGTCCATTCAAGAGTGACAAAAGCTTTGCTTCTACAA
ACGTTTCAAGTCGAGTATCCCTTCCAGTAATTTCCTTCACTGCAACTGAT
TGCTGAAAGTTTGGAAGCTTTCCAATTTTAAGACTACCATATGCACCACT
TCCAATAGTTCCAGGTAGAATTTGCAGTTCTCTTTTGTTGAACTCTGTGA
CAGAAACTCTTAACGTTTGATTGATGGCTGATGCCTTACTACGAGATCGA
TCCAAAACTGACTTCGGCAAACTATATCGTGGTGTGACTGGGATGGGTAG
CTTACGAGTTGCTGATCTCAACGCTATGGTCAATAAAGCTTTTTCACTTT
CAAGCTTTCTGATTTTCTTGTCTTTATCAAATTGTTCTTCCAGCTTTTGG
TCATAAAGTCTGCGTTTCTTTGATTTGCTTTTGCAACTCTTCTTCTTATT
CCTCCGTCGTTTTCCTTCATCTGACCGGGTGTGTGTAGACCTG Coding sequence (CDS) from alignment at scaffold_250:262210..263352 >TCONS_00055131 ID=TCONS_00055131|Name=TCONS_00055131|organism=Clytia hemisphaerica|type=CDS|length=1101bp|location=Sequence derived from alignment at scaffold_250:262210..263352 (Clytia hemisphaerica)
TCAGCAAACGTTCCCAATAAAACAAGAATTATTTAAGcccaaagataaaa
aaacacaTTGATTGCAGCCAATTTTATGCTTCAATAAGCAGATTCGTTTG
ATTGTTTCTGGTATACCGGGTCGCCCTTCAGGTGAAATGCTTTGTAAATC
GTGAGCAATGAGAGataacttttcatttttagttgaaTTACTTATCAATC
CAATATTGTATCCAAGAGAGTAAATATCACTCTTAATTGATTGGGTAGAA
TTCGGGACATTGCGAAGTTCATGGGCAAGATGAATATGCCTTTGGTTATA
TAATTTTTGCTTATCACTCCCAGATTTAATATCATACACTACTGGATCTT
CGATCAAACACGCCTTACCaaaatcaatgatttttaaGTACTTTCGATCA
CGAATAAGGATGTTGTTTGGGTGAAGGTCATTATGCAACACTCCTTTATT
GTGAATGTATTGCATGGCCAAGCACAAGTCCAATACAAGATCAAGCCACT
GAATATTCAAATCTTGACGGAGAAGCTCTCTGAGTGTAGGACTTGGGACT
GTTTCGTTACCGATGAATTCCAATAAAATAATGTTAGGGCTAACCCATCC
AAAGAGGAGGGGGAGATTTTTGTGTCCATTCAAGAGTGACAAAAGCTTTG
CTTCTACAAACGTTTCAAGTCGAGTATCCCTTCCAGTAATTTCCTTCACT
GCAACTGATTGCTGAAAGTTTGGAAGCTTTCCAATTTTAAGACTACCATA
TGCACCACTTCCAATAGTTCCAGGTAGAATTTGCAGTTCTCTTTTGTTGA
ACTCTGTGACAGAAACTCTTAACGTTTGATTGATGGCTGATGCCTTACTA
CGAGATCGATCCAAAACTGACTTCGGCAAACTATATCGTGGTGTGACTGG
GATGGGTAGCTTACGAGTTGCTGATCTCAACGCTATGGTCAATAAAGCTT
TTTCACTTTCAAGCTTTCTGATTTTCTTGTCTTTATCAAATTGTTCTTCC
AGCTTTTGGTCATAAAGTCTGCGTTTCTTTGATTTGCTTTTGCAACTCTT
CTTCTTATTCCTCCGTCGTTTTCCTTCATCTGACCGGGTGTGTGTAGACC
T
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00055131-exon-scaffold_250-1491911889:262210..263352 | TCONS_00055131-exon-scaffold_250-1491911889:262210..263352 | Clytia hemisphaerica | exon |
| TCONS_00055131-exon-scaffold_250-1510915933:262210..263352 | TCONS_00055131-exon-scaffold_250-1510915933:262210..263352 | Clytia hemisphaerica | exon |
| TCONS_00055131-exon-scaffold_250-1575043694:262210..263352 | TCONS_00055131-exon-scaffold_250-1575043694:262210..263352 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_250 | supercontig | scaffold_250:262210..263352 . |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004672 | protein kinase activity |
| GO:0005524 | ATP binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006468 | protein phosphorylation |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| biological_process |
GO:0006468 |
protein phosphorylation |
| molecular_function |
GO:0005524 |
ATP binding |
| molecular_function |
GO:0004672 |
protein kinase activity |
Blast
The following BLAST results are available for this feature:
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