TCONS_00055138 (transcript) - C. hemisphaerica

Overview


Name	TCONS_00055138
Unique Name	TCONS_00055138
Type	transcript
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1188

Sequence

The following sequences are available for this feature:

transcript sequence
transcript from alignment at scaffold_251:255474..266490+

transcript sequence

>TCONS_00055138 ID=TCONS_00055138|Name=TCONS_00055138|organism=Clytia hemisphaerica|type=transcript|length=1188bp
cattctagccgcggctttcttatactatgttgGTATCGAGCACTTTTGTT
TTTATCTGTTCACCCACACAATTGATATCAAATTGGATTATCATTTTAGA
TATCTAGCAATTTTTAGAACATTTGAACAACTTACAGGAAAGGCAGAATG
GACGAGAGTAAAGACATACAAGAATATCATAGCGAGCCATTGGAGAGCAA
ATTCATGGCTCCTTTTGCAAACATACCTTACGTTTCTAATGTGCATTACG
CTCGACCCTCCGATGTTTTTATACCAAAAggttattttaaaaacattgaa
aatatcaaaaatttcgaGTTTTTTGAAGATGATACAGTTATATGTGGATT
TCTTAAAACAGGTACGAATTGGTGCGAAAGGATTGTTTGGGCTCTTCGTA
ATGATATCAAATTGAACATTCAACATGCACCCCCTGTATCAGTTTTCGGC
ATTGTTATGGGTATAGGAGATTTCGATACTGACAACAACAAAGCTAACGA
TAAGATTTTTTCGTCGATGAAGCGACCACGTGTTATCAAAATGCATCTTC
CATATGAATTATTGCCAAAACAGTTTCAACAAAAGCAACCTAAGATGATT
TACATGCTTCGAAACCCAAATGATGTTTGCCAATCCCTTCACAGTCACTT
CTATACACTCCAAGATGGCTTTTCTGGATCTTTACAAGATGTTGTTAATC
TCATGACCGATGATGCAGGATATTATTCTGGTCCATTTTTTAGACATGTT
TTGGGATACTGGAAGCGACGCTCTCATGAAAATATACTCATCATTTTTTA
cgaagaaatgaaaaaagatttatcagGTCATATCAAGAAGATTGCTAATT
TCTTAGACATTGAAATTTCAGATGAAGAAGTTTCAAATCTGGCCAAACAT
TTTTCCTTTGATTCGATGAAACGAAAAGCAGAGCAAATGATTCCCTTCCA
TGCAAAGCAGGATGGACATAGTGCAACTGTCGAAGCAGCTCACAAGGGAA
AGACAATGTTTAACAAGGGAAAAGTTGGATCGTGGAAGGCTCTGTTTACA
CCAGACATGACAAAACAAATGGAAGAATGGGAATCGAAATGGTTGAAAGA
TCATGATCTTAAATTCATTTATGAATAGTATTgtaatcccgggggggggg
tactacccttgtcgaccgacgggggggctccgccgagg

Run BLAST on NCBI

transcript from alignment at scaffold_251:255474..266490+

Legend: exon

Hold the cursor over a type above to highlight its positions in the sequence below.

>TCONS_00055138 ID=TCONS_00055138|Name=TCONS_00055138|organism=Clytia hemisphaerica|type=transcript|length=11017bp|location=Sequence derived from alignment at scaffold_251:255474..266490+ (Clytia hemisphaerica)
cattctagccgcggctttcttatactatgttgGTATCGAGCACTTTTGTT
TTTATCTGTTCACCCACACAATTGATATCAAATTGGATTATCATTTTAGA
TATCTAGCAATTTTTAGAACATTTGAACAACTTACAGGAAAGGCAGAATG
GACGAGAGTAAAGACATACAAGAATATCATAGCGAGCCATTGGAGAGCAA
ATTCATGGCTCCTTTTGCAAACATACCTTACGTTTCTAATGTGCATTACG
CTCGACCCTCCGATGTTTTTATACCAAAAggttattttaaaaacattgaa
aatatcaaaaatttcgaGTTTTTTGAAGATGATACAGTTATATGTGGATT
TCTTAAAACAGGTAGCGTTAGtattaaacgtttttttttttttgtacatG
TGTATATTTTGCATTgatatttccatttttttataCCTTCTGGACGTGGG
TTTCACCCCTTGACAATATAATCTTATACCTCATTTTTACAGTGTTTTTG
TTCGTGAAGAGTCATTTTTCGCTAATTTCGATCATTCacacgaaaaataa
aaatccgATATCTGGCGAAAATCTCAAggggaaatgaaaaaaatcgaaaa
aaaagatACTGACTGAGCGGTTTAGAccaagaaaaactttgaagtcttat
tttgagaaaatttatcGGCTTAAGGTACTCTGAAGCTGTCGAGTTGTCGA
GGTAGGAAATTATGTAAGTTCAGGTTCTCGTTTTGAAGTTCACACTAATT
AGACAGTTGTCGATGAAAGACTTGAACCTGGAGACTCTCTATAGAAACAT
TAATGTAATGATGTTTTATCGATAATTTTTAGGTACGAATTGGTGCGAAA
GGATTGTTTGGGCACTCCGTAATGATATCAAATTGAACATTCAACACGCA
CCCCCTGTATCAGTTTTCGGGTAAGTGAGTGTGTTGCatgtaccagacga
ccacggtTTTTCCCTCGACACCGAGTAATCAAAAAGtcgcgtgttgggat
agagaAAGGTTAGTGAATGTACCAAAGTATGTAGCCCAATCGGCGGTAAA
TTTTGTCTCTGGTGGGAAAAACACCCTACAATTTCCGCCCTACTGGAAAC
TTTTGCGTATtctaacgtttttcagaatttaaagatgGGGAGAAAATTGC
AGTTTGCAGGCTTCCAGGCTTTATTCTCAGCTTTATTGggacatttttga
gcttttagatcctaaTATCCTCAGGTCCTAAGTCTAATGATTCGGAGTtg
aaactctactttccaaccgtacttaaaaaagcacttaaaaatcacttgcg
gatTTCaaatttgagggaattccccttttgtgtcAAATATTACGGTGGGG
ATTGTGGGGGAGCAAGCAAACTAAAACATCTTTCAATATCACAGCATGGT
TATGGGTATAGGAGATTCCGATAGTGACAACAACAAAGCTAACGATGAGA
TTTTTTCGTCCATGAAACGACCACGTGTTATCAAAATGAATCTTACATAT
GAATTATTACCAAGACAATTTCAACAAAAGCAACCTAAGGTATTTATAAA
TACTCTTTCTCACCTGAAAACATCAATAGAACCTGATAGAGCCATATTTT
ATAATAAGGCTAAAATAAGATGATGTTGGAAATTTTCATACTTAACAAAA
TATAGCAAACAAAATAGATCAATAGACGATATATTGGCctcacatgaaaa
ctcagatttggcCCCCGAAAATTCTCCAcgatgctttgtgcggaaaaatt
TCACCATGAactttttccgcgcaaagcattgtagGCAATTTTCGTCAAAT
CATTTCTACCTCCATGGTCAAAtatgagttttcacgttaagccaaTATAT
CGTCTATTGATCTATTTTGTTTGCTATATTTTGTCAGGTATGAAAATTTC
CAACATTGCCTTATTTTAGCCTTATTTCATTTGGTTAcgtAGAAACCATC
AATCGATagaatctaaaaattatatCGTCTATATTACTAGGCTAATCAAA
TTATACTCAATACCAAGGAATAAATTCACTCAATCAATTTAAGAATTTCC
GTAGATAACGGGTCTGTTTACATACAAGTCCGATTACAGAAACCCAAATA
TTTGCCCTCCTCCTCCCCTCCCTCCCATATTTCATTACAAATCATCGGGA
AACATCATTCTTTTCATATCACCAATAGATGATTTACATGGTTCGAAACC
CAAGAGATGTTTGCCAATCCCTTCACAGTCAATTCTATACACTTCACGAT
GGCTTTTCTGGATCTTTACAAGATGTTGTTAATCTCATGACCGACGATGC
TGGATATTATTCTGGTCCGTTTTTTAAACATGTTTTGGGATACTGGAAAC
AACGCTCTTATGAAAATATACTCATCATTTTTTAcgaagaaatgaaaaaa
gatttatcagGTCATATCAAGAAGATTGCTGATTTCTTAGACATTGAAAT
TTCAGATGAGGAAGTGTCAAATCTGGCCAAACATTTTTCCTTTGATTCGA
TGAAACGAAAAGCAGAGCAAATGATTCCCTTCCATGCAAAGCAGGTCAGT
GGTcataaatttttaaaacctttgCTGAAATTGCAGATGGAAAAACAATT
TAGCACAATCAAATCCTAATTTAATTAGTATAATAAGGCGAAGCAGTGGA
GTAGATATCCACCTTCGTTTTCATGTAGAAGGTCAGGTTTTGATTCCCAT
TCAGTGCAATAAATGGTTTGACCAGTGAATACTCCTTTATCCTATTTCTC
CAGTTTCATAATAccagttttatatttttcaggaagGTCATAGTGCAACA
GTCTTTGCAGCTCACAAGGGAAAGACAATGTTTAACAAGGGACAAGCTGG
ATCGTGGAAGGCTCTGTTTACATCAGAGATGACAAAACAAATGGAAGAAT
GGGAATCAAAATGGTTGACAGATACTGATCTTAAATTGATTTATGAATAG
TATTGGAGTATCGAAACATGTAAAATGAGAGTTAAATAGAATTTTGAAAC
GAGTAAAATGACTGTTCTTAAATTAAAAGAATACGTGTGATAGAAATTCC
ATTTTCCATTTTTGATTCCGTTTAATCCAAACGATAAAAATCAAGTGCAC
AAactctttttattgaaataatctagttattttgtatatttttaacAGGT
CAATAACAGGTCAATATTTAAAGAATGAAATAACAATAAGAGTATACTCG
ATATATTTTGACAGCATTTTGCGGCGATTAAATATTTTGCGGATAAAATC
TTTGGGACTTCCGTGAAATTTAATCTCAGCGAAATTTTACACCATTAAAG
CAAGGATTTactatacactggatatactttaatgggataaattttcgcgg
ggattaaatttcgcggttgagctcatccgcgaaattttaagatttcgcgg
ggattaattttcgcggatgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtttgatgca
agtaaccattcaaatagtatttatttgacatattttgagttttgtttaga
aatatttcgcggatgggcctttttcaaatttccaacgggatttattttcg
cggatgacacccaaatccgcgaaatccgcgaaaattaatccccgcgaaaa
tttatcccattaaagtacaagtaacagatttttgccgatttctcgtgtac
tagctataatgtccgcagtaatgatattattgttcactctccttccctca
ttaaatgacttttcgaagcatttttattgcatttcttattgaaaatcact
catccaattcccaaaagagacttaaatctttcctgtgagagtcaaattct
tccacttaattgctaattataagtcgttatgacgcggtttcaagctgtga
gaaagatgcaaaagacgtgttgtgtataagaaatttaatgtcgacaccgg
aaattttcaaacttcaacctcaaaaaaaccacttTGCCatcacgtgcctc
caaaggattttcataccacagtggagccaagatactcaagtcttatgtat
attaatttcagctcttctggggacagtcttggaaagatatttccaattga
aaatttcgtgtcactataagcattttgtctgaatttcttgtctaatgatg
tttttctcatattacatttcacaaatgtatccagctcggaatgctagcct
tactttcaaactttttttcttcaaatgtacgaaaagaaagagctagagaa
ctttttaaaaataagactgataaacatttttaaaaatcagacatcttcga
gtaacctgagatcagattgtggttgttttctgcccaccacgctgaagctc
taaagggatgggttaaaacatacaatctgacgaatatgcaaactcgaaat
cgtaaggactgcATTCGTCTAAAAGggctggggatgacaacaaaattgcg
tgattgtgtttatgagtagggcgccgtatcagtttttgactttctggcgc
gcAACAAGactcttgttgtaaaattttccgcagGAGGattattttcctca
gatgtataattttcaagtgccttcagaagtttaccgtgcacgtaagaaaa
ttatgaacagctgttatcaggttatctTCGAGCCGctatgacagttgtcc
tttgcggacaaagctagaacatcaattgttttctgaaacaatgaaaatac
aatgatcgctctccatcgttttatgagtCGTTTATCCAGTGTATAATAAA
TCTCTGATCAAAGTATTGAGTTTCCCAGGTTTTTCAAAACAGGTTTTTCC
TTATTTAATagcgttttttggacaaaaatgtccttcgtccgccaaattaa
attatcccgccagacttaatttttcaaGTCAACCGCCATATTAAATTCtc
tatgaaaattatttttggccaTATCCCCCAATAAAAtaaattcccgctaa
aatttctgCCTTTAATCTAGTGCGAgaatagcgagcacctcactaaaaac
cgggattttttatctcgtttcttagtgagttccactttgacgattttcga
aaaatagaagcctttcaagtgttttgNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNgagcccgaaaacccgggctcaaaacat
tcgaaaaagtcgcaaagtggaatagacgttaattgcgtaaaaaaacgcgg
gtgacgtctagtataggctagtgCGAGAATAAATATATTGTTTTCCCAAT
GGGGTGCGAAGTCAGGCTATTTACCATACATTAACTTTATTTCATTTGGT
TACATAGAAACCATTGATCGAtagaatctaaaaatttcaCAATCAATCGA
AAAAAATGACGATTACAAACACAATATTAAAATGAATTAATTTAATAGAT
AAAACAGTAGATAGTTATTAAAGATCTAAGGTAATCGGATTATCATTTTA
GATATCTAGCAAGTTTTAGAACATTTGAACAACTTACAGGAAAGGCAGAA
TGGACGAGGGTGAAGACATACAAAAATATCATAGCGAGCCGTTGGAAAGC
AAATTCATGACTCCTTTTGCAAACATACCTTACGTTTCTAATGTGCATTA
CGCTCGGCCTTGCGATGTTTTTATACCGAAAggctattttcaaaacattg
aaaatattaaaaatttcgaattttttgaaGATGATACAGTTATATGTGGA
TTTCTTAAAACAGGTAGCTTTAGTATTtaacgtttttttttgtttgcacA
TATTAAGCATTGATATTTCGATAAAAATATCGCTTCTGGACGTGTGTTTC
ACCTCTTGACAATACAATCTTCTACCCCCTTTGCACAGTGTTTTTGTTCG
TGAAGAGCCACTTTTCGCCAATTTAGAAGATTTCCTCGAAAAATAGAAAT
CCAATTTTTGGCGAAACTctcaagaaaaaatgaaagaaatcgaTTATAAA
GAGACTGATTGAGCAATTCAGACCAAGAGAAACTGTGAAGtcttattttt
gagaaaatttattCGCTTAAGCAAGGGACTCTGAAGCTGTCGAGCTGTTA
AGGTAGGAAATGTTATAATTTCAGGTTATCATACTAAAGCTCACACTGCT
TAGACAGTTGTCGATGAAAGACTTGAACATGGAGACTCTCTATAGAAACG
TTAATGTAATGATGTTTTATCGATAATTTTTAGGTACGAATTGGTGCGAA
AGGATTGTTTGGGCTCTTCGTAATGATATCAAATTGAACATTCAACATGC
ACCCCCTGTATCAGTTTTCGGGTAAGTGAATGTATTGCCTGCAtcagacg
accacggcttttcCCTCAACACAATCGTTtgttgggatagagataggTTA
GTGAATGTACCAAAGTATGTAGCCCAATCGGCGGTAAAATTTGTCTCAGG
TGGGAAAAGACTCTACAATTTCCGCCCTACTGCAATTTTTTgcgtatttt
aacgtttttcagaatttaaagatcgggagaaaattgcagtttcagtactt
ccactttgtttcattggatttttcgatttgtgAGGGGTTAGGTGGCTTCC
AGGCTTTATTCTCAGCTTTATTGGGACAGTTtcgagcttttagatcctga
gatccttaGGTGCTTCtgaagtcttaagtctcatgttaaaactcaaagtt
aaaactctactttccaaccgtactttaaagcacttaaaaatgacttacgg
ttttcaaatttgagggaattccccttttgtgtcAAATATTACGTCGGGGA
TTGTGGGGGAGCAAGCAAAGTAAAACAACGGTCGCCCTGTTTTTTCATCC
CAATCTAAGAcgaacaaaatatttgaaacatatGATTGTAAAAAGCTATT
ACCCAAATAGGGGCCAAATAGTAATAGAAGACAAAGGAGATGTTTTACAT
AGTTGCCACTCTCGCATTCGATGTTCAAGGGGTCAAGAATTTGCTTCAAG
TCAGAGAAATACTTGAATTAGAGAGGACTTTGTATGAATTTCCACCAGAG
GGAACCAATGGTTTAGTTCTGATTACAGAtaaattcgaattaaagaggtt
cgaattagaaaaaTATGACAATAGGAAAATAATAGATAGAGAGTTGCCCT
GGTTCAGTAAATTTTGTAATCTAAACTTTCCAGAAGTTTAAAAGTTTCCC
ATACATCAAGCACTGTCTTACCAAAGAATTATCATCTTTCAATATCACAG
CATTGTTATGGGTATAGGAGATTTCGATACTGACAACAACAAAGCTAACG
ATAAGATTTTTTCGTCGATGAAGCGACCACGTGTTATCAAAATGCATCTT
CCATATGAATTATTGCCAAAACAGTTTCAACAAAAGCAACCTAAGGTATT
TGTCTCTTTTTCACCTGCAAACATCAATAGAATCTGATAAAGCAATTTCA
AAATAAGGCTAAAATAGGGCGATGTTGGAAATTTTCATACTTGGTAATAT
ATAGCAAACAAAATAAATCAATTACAAACTATACTCACTACCTGAGTGca
cgtttatcgtttcgtagtactctacgaaaaatcaataaaaaaatttctgt
aGATAATGGGACTGTTTACATACCAGTCAGATTACAGAAACCCAAAAATT
TGACGTAACTAAACGAAAGCATTTTTCTCTAGTgaccgtagtgtagtggt
agaacatccggctacggttcgcaaggttgtgggttcaacccccaaccgga
tcataccaaagattctcaaagtgGTACttaatgcctctctgcttgatgct
cagcaatagacgatatcggatttagataaatgcaatgcattctggtttct
agggactctcaaaggaattataatagatcaattataatagattataattc
ctttgagagtccctagaaaccagaatgcattgcatttatctaaatccaaT
ATCGTCTATTAAGAGAAcgatccagggagaaagagtggcaccctcctCTA
CCTTCAGGGAGTTAGTTATCGAAATAGGAGCCTTCTGGACGCCTCCGACT
GCAGTCGACttacttacttttttctttctttatatcACAATAGATGATTT
ACATGCTTCGAAACCCAAATGATGTTTGCCAATCCCTTCACAGTCACTTC
TATACACTCCAAGATGGCTTTTCTGGATCTTTACAAGATGTTGTTAATCT
CATGACCGATGATGCAGGATATTATTCTGGTCCATTTTTTAGACATGTTT
TGGGATACTGGAAGCGACGCTCTCATGAAAATATACTCATCATTTTTTAc
gaagaaatgaaaaaagatttatcagGTCATATCAAGAAGATTGCTAATTT
CTTAGACATTGAAATTTCAGATGAAGAAGTTTCAAATCTGGCCAAACATT
TTTCCTTTGATTCGATGAAACGAAAAGCAGAGCAAATGATTCCCTTCCAT
GCAAAGCAGGTCAGTGTGAaacgattttttcaaaatctttgctgaagatg
agtaaaattatttaaaaagaagATGCCGTCATAATTAACAAATAACGTcg
aaattttttacattgaattttgagatttagtaaaattaccaaaagttttt
gaaaatttaaagtaattGGCTTTATGGATTTCAATGAATTCCACGATTTT
GTGATTATTCAGGAtgttagctggattttatgaccAATGTGTTGCAATAA
AATCATAAATGGGTTTTTTGACTCAAAATTTTGTAGACTTATGcattaaa
agattttgttaaagTCATAAAGGTTTGTTTGCTTTgaaaacagggggggg
gggtcttgcagttactccttgacactatgtggagtaactgcaattttgga
cattttctNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNGATGCCGTCATAATTAACAAATAACGTc
gaaattttttacattgaattttgagatttagtaaaattaccaaaagtttt
tgaaaatttaaagtaattGGCTTTATGGATTTCAATGAATTCCACGATTT
TGTGATTATTCAGGAtgttagctggattttatgaccAATGTTGCAATAAA
GTCATAAATGGGTTTTTTGACTCAAAATTTTGTAGACTTATGcattaaaa
gattttgttaaagtcagaaagttttgcgtgctttgaaaaatgtaaaagag
tGCAGGGATGGTTTAAATTACATCCTGGTAAAAATAAAGTTTAATCCATA
GATTTCTAAAGCCcgaaagggctagatgtcgcgCTTTGGCTGGAAAGTGT
ACCGTATCTCGGTAGAAAATTCTACCTatgtcacgtgacattacaataga
atttcagcccttgaccaatcagaagctttgcggaTTTTTGAGAATAGCAG
CTATATTTCTTGCgctatttactttttttcgccTGTGattggcttaaagc
acgacatctagcccttcgggctttataaattaTTGGTTTAATCCAGGTGA
AGGAGGAGAAATAACTCGTATACAAAAAAGAAGGAGACCTCTGTGGTATT
GTATCAACCTTTGTCAGCTTCGTCTGTACTATagcactttgtaataaaaa
taaacacaTTTTGTTTTTACAAATTGAATAATTTTCCAGGATGGACATAG
TGCAACTGTCGAAGCAGCTCACAAGGGAAAGACAATGTTTAACAAGGGAA
AAGTTGGATCGTGGAAGGCTCTGTTTACACCAGACATGACAAAACAAATG
GAAGAATGGGAATCGAAATGGTTGAAAGATCATGATCTTAAATTCATTTA
TGAATAGTATTgtaatcccggggggggggtactacccttgtcgaccgacg
ggggggctccgccgagg

Gene-mRNA-Prot

This transcript is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
XLOC_034746	XLOC_034746	Clytia hemisphaerica	gene

The following exon feature(s) are a part of this transcript:

Position

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold_251	supercontig	scaffold_251:255474..266490 +

Expression

Values :

    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1.72119	0.802574	0.505862	0.580277	0	0

Blast

[Close]

BLAST of TCONS_00055138 vs. Swiss-Prot (Human)
Match: ST1B1 (Sulfotransferase family cytosolic 1B member 1 OS=Homo sapiens GN=SULT1B1 PE=1 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 3.639e-24
Identity = 82/266 (30.83%), Postives = 125/266 (46.99%), Query Frame = 1

Query:  280 GYFKNIENIKNFEFFEDDTVICGFLKTGTNWCERIVWALRNDIKLN------IQHAPPVSVFGIVMGIGDFDTDNNKANDKIFSSMKRPRVIKMHLPYELLXXXXXXXXXXMIYMLRNPNDVCQSLHSHFYTLQD--GFSGSLQDVVN-LMTDDAGYYSGPFFRHVLGYWKRRSHENILIIFYEEMKKDLSGHIKKIANFLDIEISDEEVSNLAKHFSFDSMKRKAEQMIPFHAKQDGHSATVEAAHKGKTMFNKGKVGSWKALFT 1050
             +  N E I+ F    DD VI  + K+GT W   I+  + ND  +       I    P+    + M +    T   +  +K  S    PR++K HLP +LLPK F +   KMIY+ RN  DV  S + HF  + +   F G+ ++ +   +T    Y  G +F HV  +WK++    IL ++YE+MK++    IKKI  FL+  ++DE +  +  H SF+ MK     ++ +      H  T    H       KG  G WK  FT
Sbjct:   23 AFASNWEKIEQFHSRPDDIVIATYPKSGTTWVSEIIDMILNDGDIEKCKRGFITEKVPM----LEMTLPGLRTSGIEQLEKNPS----PRIVKTHLPTDLLPKSFWENNCKMIYLARNAKDVSVSYY-HFDLMNNLQPFPGTWEEYLEKFLTGKVAY--GSWFTHVKNWWKKKEEHPILFLYYEDMKENPKEEIKKIIRFLEKNLNDEILDRIIHHTSFEVMKDNP--LVNY-----THLPTTVMDHSKSPFMRKGTAGDWKNYFT 270

The following BLAST results are available for this feature:

BLAST of TCONS_00055138 vs. Swiss-Prot (Human)

BLAST of TCONS_00055138 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
ST1B1	3.639e-24	30.83	Sulfotransferase family cytosolic 1B member 1 OS=H...	[more]

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TCONS_00055138 (transcript) - C. hemisphaerica