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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00055140 ID=TCONS_00055140|Name=TCONS_00055140|organism=Clytia hemisphaerica|type=transcript|length=1174bp
ctttcttatactatgttgGTATCGAGCACTTTTGTTTTTATCTGTTCACC
CACACAATTGATATCAAATTGGATTATCATTTTAGATATCTAGCAATTTT
TAGAACATTTGAACAACTTACAGGAAAGGCAGAATGGACGAGAGTAAAGA
CATACAAGAATATCATAGCGAGCCATTGGAGAGCAAATTCATGGCTCCTT
TTGCAAACATACCTTACGTTTCTAATGTGCATTACGCTCGACCCTCCGAT
GTTTTTATACCAAAAggttattttaaaaacattgaaaatatcaaaaattt
cgaGTTTTTTGAAGATGATACAGTTATATGTGGATTTCTTAAAACAGGTA
CGAATTGGTGCGAAAGGATTGTTTGGGCACTCCGTAATGATATCAAATTG
AACATTCAACATGCACCCCCTGTATCAGTTTTCGGCATTGTTATGGGTAT
AGGAGATTTCGATACTGACAACAACAAAGCTAACGATAAGATTTTTTCGT
CGATGAAGCGACCACGTGTTATCAAAATGCATCTTCCATATGAATTATTG
CCAAAACAGTTTCAACAAAAGCAACCTAAGATGATTTACATGCTTCGAAA
CCCAAATGATGTTTGCCAATCCCTTCACAGTCACTTCTATACACTCCAAG
ATGGCTTTTCTGGATCTTTACAAGATGTTGTTAATCTCATGACCGATGAT
GCAGGATATTATTCTGGTCCATTTTTTAGACATGTTTTGGGATACTGGAA
GCGACGCTCTCATGAAAATATACTCATCATTTTTTAcgaagaaatgaaaa
aagatttatcagGTCATATCAAGAAGATTGCTAATTTCTTAGACATTGAA
ATTTCAGATGAAGAAGTTTCAAATCTGGCCAAACATTTTTCCTTTGATTC
GATGAAACGAAAAGCAGAGCAAATGATTCCCTTCCATGCAAAGCAGGATG
GACATAGTGCAACTGTCGAAGCAGCTCACAAGGGAAAGACAATGTTTAAC
AAGGGAAAAGTTGGATCGTGGAAGGCTCTGTTTACACCAGACATGACAAA
ACAAATGGAAGAATGGGAATCGAAATGGTTGAAAGATCATGATCTTAAAT
TCATTTATGAATAGTATTgtaatcccggggggggggtactacccttgtcg
accgacgggggggctccgccgagg Run BLAST on NCBI protein sequence of TCONS_00055140-protein >TCONS_00055140-protein ID=TCONS_00055140-protein|Name=TCONS_00055140-protein|organism=Clytia hemisphaerica|type=polypeptide|length=326bp
MDESKDIQEYHSEPLESKFMAPFANIPYVSNVHYARPSDVFIPKGYFKNI
ENIKNFEFFEDDTVICGFLKTGTNWCERIVWALRNDIKLNIQHAPPVSVF
GIVMGIGDFDTDNNKANDKIFSSMKRPRVIKMHLPYELLPKQFQQKQPKM
IYMLRNPNDVCQSLHSHFYTLQDGFSGSLQDVVNLMTDDAGYYSGPFFRH
VLGYWKRRSHENILIIFYEEMKKDLSGHIKKIANFLDIEISDEEVSNLAK
HFSFDSMKRKAEQMIPFHAKQDGHSATVEAAHKGKTMFNKGKVGSWKALF
TPDMTKQMEEWESKWLKDHDLKFIYE Run BLAST on NCBI transcript from alignment at scaffold_251:255488..266490+ Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00055140 ID=TCONS_00055140|Name=TCONS_00055140|organism=Clytia hemisphaerica|type=transcript|length=11003bp|location=Sequence derived from alignment at scaffold_251:255488..266490+ (Clytia hemisphaerica)
ctttcttatactatgttgGTATCGAGCACTTTTGTTTTTATCTGTTCACC
CACACAATTGATATCAAATTGGATTATCATTTTAGATATCTAGCAATTTT
TAGAACATTTGAACAACTTACAGGAAAGGCAGAATGGACGAGAGTAAAGA
CATACAAGAATATCATAGCGAGCCATTGGAGAGCAAATTCATGGCTCCTT
TTGCAAACATACCTTACGTTTCTAATGTGCATTACGCTCGACCCTCCGAT
GTTTTTATACCAAAAggttattttaaaaacattgaaaatatcaaaaattt
cgaGTTTTTTGAAGATGATACAGTTATATGTGGATTTCTTAAAACAGGTA
GCGTTAGtattaaacgtttttttttttttgtacatGTGTATATTTTGCAT
TgatatttccatttttttataCCTTCTGGACGTGGGTTTCACCCCTTGAC
AATATAATCTTATACCTCATTTTTACAGTGTTTTTGTTCGTGAAGAGTCA
TTTTTCGCTAATTTCGATCATTCacacgaaaaataaaaatccgATATCTG
GCGAAAATCTCAAggggaaatgaaaaaaatcgaaaaaaaagatACTGACT
GAGCGGTTTAGAccaagaaaaactttgaagtcttattttgagaaaattta
tcGGCTTAAGGTACTCTGAAGCTGTCGAGTTGTCGAGGTAGGAAATTATG
TAAGTTCAGGTTCTCGTTTTGAAGTTCACACTAATTAGACAGTTGTCGAT
GAAAGACTTGAACCTGGAGACTCTCTATAGAAACATTAATGTAATGATGT
TTTATCGATAATTTTTAGGTACGAATTGGTGCGAAAGGATTGTTTGGGCA
CTCCGTAATGATATCAAATTGAACATTCAACACGCACCCCCTGTATCAGT
TTTCGGGTAAGTGAGTGTGTTGCatgtaccagacgaccacggtTTTTCCC
TCGACACCGAGTAATCAAAAAGtcgcgtgttgggatagagaAAGGTTAGT
GAATGTACCAAAGTATGTAGCCCAATCGGCGGTAAATTTTGTCTCTGGTG
GGAAAAACACCCTACAATTTCCGCCCTACTGGAAACTTTTGCGTATtcta
acgtttttcagaatttaaagatgGGGAGAAAATTGCAGTTTGCAGGCTTC
CAGGCTTTATTCTCAGCTTTATTGggacatttttgagcttttagatccta
aTATCCTCAGGTCCTAAGTCTAATGATTCGGAGTtgaaactctactttcc
aaccgtacttaaaaaagcacttaaaaatcacttgcggatTTCaaatttga
gggaattccccttttgtgtcAAATATTACGGTGGGGATTGTGGGGGAGCA
AGCAAACTAAAACATCTTTCAATATCACAGCATGGTTATGGGTATAGGAG
ATTCCGATAGTGACAACAACAAAGCTAACGATGAGATTTTTTCGTCCATG
AAACGACCACGTGTTATCAAAATGAATCTTACATATGAATTATTACCAAG
ACAATTTCAACAAAAGCAACCTAAGGTATTTATAAATACTCTTTCTCACC
TGAAAACATCAATAGAACCTGATAGAGCCATATTTTATAATAAGGCTAAA
ATAAGATGATGTTGGAAATTTTCATACTTAACAAAATATAGCAAACAAAA
TAGATCAATAGACGATATATTGGCctcacatgaaaactcagatttggcCC
CCGAAAATTCTCCAcgatgctttgtgcggaaaaattTCACCATGAacttt
ttccgcgcaaagcattgtagGCAATTTTCGTCAAATCATTTCTACCTCCA
TGGTCAAAtatgagttttcacgttaagccaaTATATCGTCTATTGATCTA
TTTTGTTTGCTATATTTTGTCAGGTATGAAAATTTCCAACATTGCCTTAT
TTTAGCCTTATTTCATTTGGTTAcgtAGAAACCATCAATCGATagaatct
aaaaattatatCGTCTATATTACTAGGCTAATCAAATTATACTCAATACC
AAGGAATAAATTCACTCAATCAATTTAAGAATTTCCGTAGATAACGGGTC
TGTTTACATACAAGTCCGATTACAGAAACCCAAATATTTGCCCTCCTCCT
CCCCTCCCTCCCATATTTCATTACAAATCATCGGGAAACATCATTCTTTT
CATATCACCAATAGATGATTTACATGGTTCGAAACCCAAGAGATGTTTGC
CAATCCCTTCACAGTCAATTCTATACACTTCACGATGGCTTTTCTGGATC
TTTACAAGATGTTGTTAATCTCATGACCGACGATGCTGGATATTATTCTG
GTCCGTTTTTTAAACATGTTTTGGGATACTGGAAACAACGCTCTTATGAA
AATATACTCATCATTTTTTAcgaagaaatgaaaaaagatttatcagGTCA
TATCAAGAAGATTGCTGATTTCTTAGACATTGAAATTTCAGATGAGGAAG
TGTCAAATCTGGCCAAACATTTTTCCTTTGATTCGATGAAACGAAAAGCA
GAGCAAATGATTCCCTTCCATGCAAAGCAGGTCAGTGGTcataaattttt
aaaacctttgCTGAAATTGCAGATGGAAAAACAATTTAGCACAATCAAAT
CCTAATTTAATTAGTATAATAAGGCGAAGCAGTGGAGTAGATATCCACCT
TCGTTTTCATGTAGAAGGTCAGGTTTTGATTCCCATTCAGTGCAATAAAT
GGTTTGACCAGTGAATACTCCTTTATCCTATTTCTCCAGTTTCATAATAc
cagttttatatttttcaggaagGTCATAGTGCAACAGTCTTTGCAGCTCA
CAAGGGAAAGACAATGTTTAACAAGGGACAAGCTGGATCGTGGAAGGCTC
TGTTTACATCAGAGATGACAAAACAAATGGAAGAATGGGAATCAAAATGG
TTGACAGATACTGATCTTAAATTGATTTATGAATAGTATTGGAGTATCGA
AACATGTAAAATGAGAGTTAAATAGAATTTTGAAACGAGTAAAATGACTG
TTCTTAAATTAAAAGAATACGTGTGATAGAAATTCCATTTTCCATTTTTG
ATTCCGTTTAATCCAAACGATAAAAATCAAGTGCACAAactctttttatt
gaaataatctagttattttgtatatttttaacAGGTCAATAACAGGTCAA
TATTTAAAGAATGAAATAACAATAAGAGTATACTCGATATATTTTGACAG
CATTTTGCGGCGATTAAATATTTTGCGGATAAAATCTTTGGGACTTCCGT
GAAATTTAATCTCAGCGAAATTTTACACCATTAAAGCAAGGATTTactat
acactggatatactttaatgggataaattttcgcggggattaaatttcgc
ggttgagctcatccgcgaaattttaagatttcgcggggattaattttcgc
ggatgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNtttgatgcaagtaaccattcaaa
tagtatttatttgacatattttgagttttgtttagaaatatttcgcggat
gggcctttttcaaatttccaacgggatttattttcgcggatgacacccaa
atccgcgaaatccgcgaaaattaatccccgcgaaaatttatcccattaaa
gtacaagtaacagatttttgccgatttctcgtgtactagctataatgtcc
gcagtaatgatattattgttcactctccttccctcattaaatgacttttc
gaagcatttttattgcatttcttattgaaaatcactcatccaattcccaa
aagagacttaaatctttcctgtgagagtcaaattcttccacttaattgct
aattataagtcgttatgacgcggtttcaagctgtgagaaagatgcaaaag
acgtgttgtgtataagaaatttaatgtcgacaccggaaattttcaaactt
caacctcaaaaaaaccacttTGCCatcacgtgcctccaaaggattttcat
accacagtggagccaagatactcaagtcttatgtatattaatttcagctc
ttctggggacagtcttggaaagatatttccaattgaaaatttcgtgtcac
tataagcattttgtctgaatttcttgtctaatgatgtttttctcatatta
catttcacaaatgtatccagctcggaatgctagccttactttcaaacttt
ttttcttcaaatgtacgaaaagaaagagctagagaactttttaaaaataa
gactgataaacatttttaaaaatcagacatcttcgagtaacctgagatca
gattgtggttgttttctgcccaccacgctgaagctctaaagggatgggtt
aaaacatacaatctgacgaatatgcaaactcgaaatcgtaaggactgcAT
TCGTCTAAAAGggctggggatgacaacaaaattgcgtgattgtgtttatg
agtagggcgccgtatcagtttttgactttctggcgcgcAACAAGactctt
gttgtaaaattttccgcagGAGGattattttcctcagatgtataattttc
aagtgccttcagaagtttaccgtgcacgtaagaaaattatgaacagctgt
tatcaggttatctTCGAGCCGctatgacagttgtcctttgcggacaaagc
tagaacatcaattgttttctgaaacaatgaaaatacaatgatcgctctcc
atcgttttatgagtCGTTTATCCAGTGTATAATAAATCTCTGATCAAAGT
ATTGAGTTTCCCAGGTTTTTCAAAACAGGTTTTTCCTTATTTAATagcgt
tttttggacaaaaatgtccttcgtccgccaaattaaattatcccgccaga
cttaatttttcaaGTCAACCGCCATATTAAATTCtctatgaaaattattt
ttggccaTATCCCCCAATAAAAtaaattcccgctaaaatttctgCCTTTA
ATCTAGTGCGAgaatagcgagcacctcactaaaaaccgggattttttatc
tcgtttcttagtgagttccactttgacgattttcgaaaaatagaagcctt
tcaagtgttttgNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNgagcccgaaaacccgggctcaaaacattcgaaaaagtcgca
aagtggaatagacgttaattgcgtaaaaaaacgcgggtgacgtctagtat
aggctagtgCGAGAATAAATATATTGTTTTCCCAATGGGGTGCGAAGTCA
GGCTATTTACCATACATTAACTTTATTTCATTTGGTTACATAGAAACCAT
TGATCGAtagaatctaaaaatttcaCAATCAATCGAAAAAAATGACGATT
ACAAACACAATATTAAAATGAATTAATTTAATAGATAAAACAGTAGATAG
TTATTAAAGATCTAAGGTAATCGGATTATCATTTTAGATATCTAGCAAGT
TTTAGAACATTTGAACAACTTACAGGAAAGGCAGAATGGACGAGGGTGAA
GACATACAAAAATATCATAGCGAGCCGTTGGAAAGCAAATTCATGACTCC
TTTTGCAAACATACCTTACGTTTCTAATGTGCATTACGCTCGGCCTTGCG
ATGTTTTTATACCGAAAggctattttcaaaacattgaaaatattaaaaat
ttcgaattttttgaaGATGATACAGTTATATGTGGATTTCTTAAAACAGG
TAGCTTTAGTATTtaacgtttttttttgtttgcacATATTAAGCATTGAT
ATTTCGATAAAAATATCGCTTCTGGACGTGTGTTTCACCTCTTGACAATA
CAATCTTCTACCCCCTTTGCACAGTGTTTTTGTTCGTGAAGAGCCACTTT
TCGCCAATTTAGAAGATTTCCTCGAAAAATAGAAATCCAATTTTTGGCGA
AACTctcaagaaaaaatgaaagaaatcgaTTATAAAGAGACTGATTGAGC
AATTCAGACCAAGAGAAACTGTGAAGtcttatttttgagaaaatttattC
GCTTAAGCAAGGGACTCTGAAGCTGTCGAGCTGTTAAGGTAGGAAATGTT
ATAATTTCAGGTTATCATACTAAAGCTCACACTGCTTAGACAGTTGTCGA
TGAAAGACTTGAACATGGAGACTCTCTATAGAAACGTTAATGTAATGATG
TTTTATCGATAATTTTTAGGTACGAATTGGTGCGAAAGGATTGTTTGGGC
TCTTCGTAATGATATCAAATTGAACATTCAACATGCACCCCCTGTATCAG
TTTTCGGGTAAGTGAATGTATTGCCTGCAtcagacgaccacggcttttcC
CTCAACACAATCGTTtgttgggatagagataggTTAGTGAATGTACCAAA
GTATGTAGCCCAATCGGCGGTAAAATTTGTCTCAGGTGGGAAAAGACTCT
ACAATTTCCGCCCTACTGCAATTTTTTgcgtattttaacgtttttcagaa
tttaaagatcgggagaaaattgcagtttcagtacttccactttgtttcat
tggatttttcgatttgtgAGGGGTTAGGTGGCTTCCAGGCTTTATTCTCA
GCTTTATTGGGACAGTTtcgagcttttagatcctgagatccttaGGTGCT
TCtgaagtcttaagtctcatgttaaaactcaaagttaaaactctactttc
caaccgtactttaaagcacttaaaaatgacttacggttttcaaatttgag
ggaattccccttttgtgtcAAATATTACGTCGGGGATTGTGGGGGAGCAA
GCAAAGTAAAACAACGGTCGCCCTGTTTTTTCATCCCAATCTAAGAcgaa
caaaatatttgaaacatatGATTGTAAAAAGCTATTACCCAAATAGGGGC
CAAATAGTAATAGAAGACAAAGGAGATGTTTTACATAGTTGCCACTCTCG
CATTCGATGTTCAAGGGGTCAAGAATTTGCTTCAAGTCAGAGAAATACTT
GAATTAGAGAGGACTTTGTATGAATTTCCACCAGAGGGAACCAATGGTTT
AGTTCTGATTACAGAtaaattcgaattaaagaggttcgaattagaaaaaT
ATGACAATAGGAAAATAATAGATAGAGAGTTGCCCTGGTTCAGTAAATTT
TGTAATCTAAACTTTCCAGAAGTTTAAAAGTTTCCCATACATCAAGCACT
GTCTTACCAAAGAATTATCATCTTTCAATATCACAGCATTGTTATGGGTA
TAGGAGATTTCGATACTGACAACAACAAAGCTAACGATAAGATTTTTTCG
TCGATGAAGCGACCACGTGTTATCAAAATGCATCTTCCATATGAATTATT
GCCAAAACAGTTTCAACAAAAGCAACCTAAGGTATTTGTCTCTTTTTCAC
CTGCAAACATCAATAGAATCTGATAAAGCAATTTCAAAATAAGGCTAAAA
TAGGGCGATGTTGGAAATTTTCATACTTGGTAATATATAGCAAACAAAAT
AAATCAATTACAAACTATACTCACTACCTGAGTGcacgtttatcgtttcg
tagtactctacgaaaaatcaataaaaaaatttctgtaGATAATGGGACTG
TTTACATACCAGTCAGATTACAGAAACCCAAAAATTTGACGTAACTAAAC
GAAAGCATTTTTCTCTAGTgaccgtagtgtagtggtagaacatccggcta
cggttcgcaaggttgtgggttcaacccccaaccggatcataccaaagatt
ctcaaagtgGTACttaatgcctctctgcttgatgctcagcaatagacgat
atcggatttagataaatgcaatgcattctggtttctagggactctcaaag
gaattataatagatcaattataatagattataattcctttgagagtccct
agaaaccagaatgcattgcatttatctaaatccaaTATCGTCTATTAAGA
GAAcgatccagggagaaagagtggcaccctcctCTACCTTCAGGGAGTTA
GTTATCGAAATAGGAGCCTTCTGGACGCCTCCGACTGCAGTCGACttact
tacttttttctttctttatatcACAATAGATGATTTACATGCTTCGAAAC
CCAAATGATGTTTGCCAATCCCTTCACAGTCACTTCTATACACTCCAAGA
TGGCTTTTCTGGATCTTTACAAGATGTTGTTAATCTCATGACCGATGATG
CAGGATATTATTCTGGTCCATTTTTTAGACATGTTTTGGGATACTGGAAG
CGACGCTCTCATGAAAATATACTCATCATTTTTTAcgaagaaatgaaaaa
agatttatcagGTCATATCAAGAAGATTGCTAATTTCTTAGACATTGAAA
TTTCAGATGAAGAAGTTTCAAATCTGGCCAAACATTTTTCCTTTGATTCG
ATGAAACGAAAAGCAGAGCAAATGATTCCCTTCCATGCAAAGCAGGTCAG
TGTGAaacgattttttcaaaatctttgctgaagatgagtaaaattattta
aaaagaagATGCCGTCATAATTAACAAATAACGTcgaaattttttacatt
gaattttgagatttagtaaaattaccaaaagtttttgaaaatttaaagta
attGGCTTTATGGATTTCAATGAATTCCACGATTTTGTGATTATTCAGGA
tgttagctggattttatgaccAATGTGTTGCAATAAAATCATAAATGGGT
TTTTTGACTCAAAATTTTGTAGACTTATGcattaaaagattttgttaaag
TCATAAAGGTTTGTTTGCTTTgaaaacagggggggggggtcttgcagtta
ctccttgacactatgtggagtaactgcaattttggacattttctNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNGATGCCGTCATAATTAACAAATAACGTcgaaattttttacat
tgaattttgagatttagtaaaattaccaaaagtttttgaaaatttaaagt
aattGGCTTTATGGATTTCAATGAATTCCACGATTTTGTGATTATTCAGG
AtgttagctggattttatgaccAATGTTGCAATAAAGTCATAAATGGGTT
TTTTGACTCAAAATTTTGTAGACTTATGcattaaaagattttgttaaagt
cagaaagttttgcgtgctttgaaaaatgtaaaagagtGCAGGGATGGTTT
AAATTACATCCTGGTAAAAATAAAGTTTAATCCATAGATTTCTAAAGCCc
gaaagggctagatgtcgcgCTTTGGCTGGAAAGTGTACCGTATCTCGGTA
GAAAATTCTACCTatgtcacgtgacattacaatagaatttcagcccttga
ccaatcagaagctttgcggaTTTTTGAGAATAGCAGCTATATTTCTTGCg
ctatttactttttttcgccTGTGattggcttaaagcacgacatctagccc
ttcgggctttataaattaTTGGTTTAATCCAGGTGAAGGAGGAGAAATAA
CTCGTATACAAAAAAGAAGGAGACCTCTGTGGTATTGTATCAACCTTTGT
CAGCTTCGTCTGTACTATagcactttgtaataaaaataaacacaTTTTGT
TTTTACAAATTGAATAATTTTCCAGGATGGACATAGTGCAACTGTCGAAG
CAGCTCACAAGGGAAAGACAATGTTTAACAAGGGAAAAGTTGGATCGTGG
AAGGCTCTGTTTACACCAGACATGACAAAACAAATGGAAGAATGGGAATC
GAAATGGTTGAAAGATCATGATCTTAAATTCATTTATGAATAGTATTgta
atcccggggggggggtactacccttgtcgaccgacgggggggctccgccg
agg Coding sequence (CDS) from alignment at scaffold_251:255488..266490+ >TCONS_00055140 ID=TCONS_00055140|Name=TCONS_00055140|organism=Clytia hemisphaerica|type=CDS|length=5886bp|location=Sequence derived from alignment at scaffold_251:255488..266490+ (Clytia hemisphaerica)
ATGGACGAGAGTAAAGACATACAAGAATATCATAGCGAGCCATTGGAGAG
CAAATTCATGGCTCCTTTTGCAAACATACCTTACGTTTCTAATGTGCATT
ACGCTCGACCCTCCGATGTTTTTATACCAAAAggttattttaaaaacatt
gaaaatatcaaaaatttcgaGTTTTTTGAAGATGATACAGTTATATGTGG
ATTTCTTAAAACAGGTACGAATTGGTGCGAAAGGATTGTTTGGGCACTCC
GTAATGATATCAAATTGAACATTCAACATGCACCCCCTGTATCAGTTTTC
GGCATTGTTATGGGTATAGGAGATTTCGATACTGACAACAACAAAGCTAA
CGATAAGATTTTTTCGTCGATGAAGCGACCACGTGTTATCAAAATGCATC
TTCCATATGAATTATTGCCAAAACAGTTTCAACAAAAGCAACCTAAGATG
ATTTACATGCTTCGAAACCCAAATGATGTTTGCCAATCCCTTCACAGTCA
CTTCTATACACTCCAAGATGGCTTTTCTGGATCTTTACAAGATGTTGTTA
ATCTCATGACCGATGATGCAGGATATTATTCTGGTCCATTTTTTAGACAT
GTTTTGGGATACTGGAAGCGACGCTCTCATGAAAATATACTCATCATTTT
TTAcgaagaaatgaaaaaagatttatcagGTCATATCAAGAAGATTGCTA
ATTTCTTAGACATTGAAATTTCAGATGAAGAAGTTTCAAATCTGGCCAAA
CATTTTTCCTTTGATTCGATGAAACGAAAAGCAGAGCAAATGATTCCCTT
CCATGCAAAGCAGGATGGACATAGTGCAACTGTCGAAGCAGCTCACAAGG
GAAAGACAATGTTTAACAAGGGAAAAGTTGGATCGTGGAAGGCTCTGTTT
ACACCAGACATGACAAAACAAATGGAAGAATGGGAATCGAAATGGTTGAA
AGATCATGATCTTAAATTCATTTATGAATAGATGGACGAGAGTAAAGACA
TACAAGAATATCATAGCGAGCCATTGGAGAGCAAATTCATGGCTCCTTTT
GCAAACATACCTTACGTTTCTAATGTGCATTACGCTCGACCCTCCGATGT
TTTTATACCAAAAggttattttaaaaacattgaaaatatcaaaaatttcg
aGTTTTTTGAAGATGATACAGTTATATGTGGATTTCTTAAAACAGGTACG
AATTGGTGCGAAAGGATTGTTTGGGCACTCCGTAATGATATCAAATTGAA
CATTCAACATGCACCCCCTGTATCAGTTTTCGGCATTGTTATGGGTATAG
GAGATTTCGATACTGACAACAACAAAGCTAACGATAAGATTTTTTCGTCG
ATGAAGCGACCACGTGTTATCAAAATGCATCTTCCATATGAATTATTGCC
AAAACAGTTTCAACAAAAGCAACCTAAGATGATTTACATGCTTCGAAACC
CAAATGATGTTTGCCAATCCCTTCACAGTCACTTCTATACACTCCAAGAT
GGCTTTTCTGGATCTTTACAAGATGTTGTTAATCTCATGACCGATGATGC
AGGATATTATTCTGGTCCATTTTTTAGACATGTTTTGGGATACTGGAAGC
GACGCTCTCATGAAAATATACTCATCATTTTTTAcgaagaaatgaaaaaa
gatttatcagGTCATATCAAGAAGATTGCTAATTTCTTAGACATTGAAAT
TTCAGATGAAGAAGTTTCAAATCTGGCCAAACATTTTTCCTTTGATTCGA
TGAAACGAAAAGCAGAGCAAATGATTCCCTTCCATGCAAAGCAGGATGGA
CATAGTGCAACTGTCGAAGCAGCTCACAAGGGAAAGACAATGTTTAACAA
GGGAAAAGTTGGATCGTGGAAGGCTCTGTTTACACCAGACATGACAAAAC
AAATGGAAGAATGGGAATCGAAATGGTTGAAAGATCATGATCTTAAATTC
ATTTATGAATAGATGGACGAGAGTAAAGACATACAAGAATATCATAGCGA
GCCATTGGAGAGCAAATTCATGGCTCCTTTTGCAAACATACCTTACGTTT
CTAATGTGCATTACGCTCGACCCTCCGATGTTTTTATACCAAAAggttat
tttaaaaacattgaaaatatcaaaaatttcgaGTTTTTTGAAGATGATAC
AGTTATATGTGGATTTCTTAAAACAGGTACGAATTGGTGCGAAAGGATTG
TTTGGGCACTCCGTAATGATATCAAATTGAACATTCAACATGCACCCCCT
GTATCAGTTTTCGGCATTGTTATGGGTATAGGAGATTTCGATACTGACAA
CAACAAAGCTAACGATAAGATTTTTTCGTCGATGAAGCGACCACGTGTTA
TCAAAATGCATCTTCCATATGAATTATTGCCAAAACAGTTTCAACAAAAG
CAACCTAAGATGATTTACATGCTTCGAAACCCAAATGATGTTTGCCAATC
CCTTCACAGTCACTTCTATACACTCCAAGATGGCTTTTCTGGATCTTTAC
AAGATGTTGTTAATCTCATGACCGATGATGCAGGATATTATTCTGGTCCA
TTTTTTAGACATGTTTTGGGATACTGGAAGCGACGCTCTCATGAAAATAT
ACTCATCATTTTTTAcgaagaaatgaaaaaagatttatcagGTCATATCA
AGAAGATTGCTAATTTCTTAGACATTGAAATTTCAGATGAAGAAGTTTCA
AATCTGGCCAAACATTTTTCCTTTGATTCGATGAAACGAAAAGCAGAGCA
AATGATTCCCTTCCATGCAAAGCAGGATGGACATAGTGCAACTGTCGAAG
CAGCTCACAAGGGAAAGACAATGTTTAACAAGGGAAAAGTTGGATCGTGG
AAGGCTCTGTTTACACCAGACATGACAAAACAAATGGAAGAATGGGAATC
GAAATGGTTGAAAGATCATGATCTTAAATTCATTTATGAATAGATGGACG
AGAGTAAAGACATACAAGAATATCATAGCGAGCCATTGGAGAGCAAATTC
ATGGCTCCTTTTGCAAACATACCTTACGTTTCTAATGTGCATTACGCTCG
ACCCTCCGATGTTTTTATACCAAAAggttattttaaaaacattgaaaata
tcaaaaatttcgaGTTTTTTGAAGATGATACAGTTATATGTGGATTTCTT
AAAACAGGTACGAATTGGTGCGAAAGGATTGTTTGGGCACTCCGTAATGA
TATCAAATTGAACATTCAACATGCACCCCCTGTATCAGTTTTCGGCATTG
TTATGGGTATAGGAGATTTCGATACTGACAACAACAAAGCTAACGATAAG
ATTTTTTCGTCGATGAAGCGACCACGTGTTATCAAAATGCATCTTCCATA
TGAATTATTGCCAAAACAGTTTCAACAAAAGCAACCTAAGATGATTTACA
TGCTTCGAAACCCAAATGATGTTTGCCAATCCCTTCACAGTCACTTCTAT
ACACTCCAAGATGGCTTTTCTGGATCTTTACAAGATGTTGTTAATCTCAT
GACCGATGATGCAGGATATTATTCTGGTCCATTTTTTAGACATGTTTTGG
GATACTGGAAGCGACGCTCTCATGAAAATATACTCATCATTTTTTAcgaa
gaaatgaaaaaagatttatcagGTCATATCAAGAAGATTGCTAATTTCTT
AGACATTGAAATTTCAGATGAAGAAGTTTCAAATCTGGCCAAACATTTTT
CCTTTGATTCGATGAAACGAAAAGCAGAGCAAATGATTCCCTTCCATGCA
AAGCAGGATGGACATAGTGCAACTGTCGAAGCAGCTCACAAGGGAAAGAC
AATGTTTAACAAGGGAAAAGTTGGATCGTGGAAGGCTCTGTTTACACCAG
ACATGACAAAACAAATGGAAGAATGGGAATCGAAATGGTTGAAAGATCAT
GATCTTAAATTCATTTATGAATAGATGGACGAGAGTAAAGACATACAAGA
ATATCATAGCGAGCCATTGGAGAGCAAATTCATGGCTCCTTTTGCAAACA
TACCTTACGTTTCTAATGTGCATTACGCTCGACCCTCCGATGTTTTTATA
CCAAAAggttattttaaaaacattgaaaatatcaaaaatttcgaGTTTTT
TGAAGATGATACAGTTATATGTGGATTTCTTAAAACAGGTACGAATTGGT
GCGAAAGGATTGTTTGGGCACTCCGTAATGATATCAAATTGAACATTCAA
CATGCACCCCCTGTATCAGTTTTCGGCATTGTTATGGGTATAGGAGATTT
CGATACTGACAACAACAAAGCTAACGATAAGATTTTTTCGTCGATGAAGC
GACCACGTGTTATCAAAATGCATCTTCCATATGAATTATTGCCAAAACAG
TTTCAACAAAAGCAACCTAAGATGATTTACATGCTTCGAAACCCAAATGA
TGTTTGCCAATCCCTTCACAGTCACTTCTATACACTCCAAGATGGCTTTT
CTGGATCTTTACAAGATGTTGTTAATCTCATGACCGATGATGCAGGATAT
TATTCTGGTCCATTTTTTAGACATGTTTTGGGATACTGGAAGCGACGCTC
TCATGAAAATATACTCATCATTTTTTAcgaagaaatgaaaaaagatttat
cagGTCATATCAAGAAGATTGCTAATTTCTTAGACATTGAAATTTCAGAT
GAAGAAGTTTCAAATCTGGCCAAACATTTTTCCTTTGATTCGATGAAACG
AAAAGCAGAGCAAATGATTCCCTTCCATGCAAAGCAGGATGGACATAGTG
CAACTGTCGAAGCAGCTCACAAGGGAAAGACAATGTTTAACAAGGGAAAA
GTTGGATCGTGGAAGGCTCTGTTTACACCAGACATGACAAAACAAATGGA
AGAATGGGAATCGAAATGGTTGAAAGATCATGATCTTAAATTCATTTATG
AATAGATGGACGAGAGTAAAGACATACAAGAATATCATAGCGAGCCATTG
GAGAGCAAATTCATGGCTCCTTTTGCAAACATACCTTACGTTTCTAATGT
GCATTACGCTCGACCCTCCGATGTTTTTATACCAAAAggttattttaaaa
acattgaaaatatcaaaaatttcgaGTTTTTTGAAGATGATACAGTTATA
TGTGGATTTCTTAAAACAGGTACGAATTGGTGCGAAAGGATTGTTTGGGC
ACTCCGTAATGATATCAAATTGAACATTCAACATGCACCCCCTGTATCAG
TTTTCGGCATTGTTATGGGTATAGGAGATTTCGATACTGACAACAACAAA
GCTAACGATAAGATTTTTTCGTCGATGAAGCGACCACGTGTTATCAAAAT
GCATCTTCCATATGAATTATTGCCAAAACAGTTTCAACAAAAGCAACCTA
AGATGATTTACATGCTTCGAAACCCAAATGATGTTTGCCAATCCCTTCAC
AGTCACTTCTATACACTCCAAGATGGCTTTTCTGGATCTTTACAAGATGT
TGTTAATCTCATGACCGATGATGCAGGATATTATTCTGGTCCATTTTTTA
GACATGTTTTGGGATACTGGAAGCGACGCTCTCATGAAAATATACTCATC
ATTTTTTAcgaagaaatgaaaaaagatttatcagGTCATATCAAGAAGAT
TGCTAATTTCTTAGACATTGAAATTTCAGATGAAGAAGTTTCAAATCTGG
CCAAACATTTTTCCTTTGATTCGATGAAACGAAAAGCAGAGCAAATGATT
CCCTTCCATGCAAAGCAGGATGGACATAGTGCAACTGTCGAAGCAGCTCA
CAAGGGAAAGACAATGTTTAACAAGGGAAAAGTTGGATCGTGGAAGGCTC
TGTTTACACCAGACATGACAAAACAAATGGAAGAATGGGAATCGAAATGG
TTGAAAGATCATGATCTTAAATTCATTTATGAATAG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00055140-exon-scaffold_251-1491911889:255488..255834 | TCONS_00055140-exon-scaffold_251-1491911889:255488..255834 | Clytia hemisphaerica | exon |
| TCONS_00055140-exon-scaffold_251-1510915933:255488..255834 | TCONS_00055140-exon-scaffold_251-1510915933:255488..255834 | Clytia hemisphaerica | exon |
| TCONS_00055140-exon-scaffold_251-1575043694:255488..255834 | TCONS_00055140-exon-scaffold_251-1575043694:255488..255834 | Clytia hemisphaerica | exon |
| TCONS_00055140-exon-scaffold_251-1491911889:256306..256361 | TCONS_00055140-exon-scaffold_251-1491911889:256306..256361 | Clytia hemisphaerica | exon |
| TCONS_00055140-exon-scaffold_251-1510915933:256306..256361 | TCONS_00055140-exon-scaffold_251-1510915933:256306..256361 | Clytia hemisphaerica | exon |
| TCONS_00055140-exon-scaffold_251-1575043694:256306..256361 | TCONS_00055140-exon-scaffold_251-1575043694:256306..256361 | Clytia hemisphaerica | exon |
| TCONS_00055140-exon-scaffold_251-1491911889:262013..262044 | TCONS_00055140-exon-scaffold_251-1491911889:262013..262044 | Clytia hemisphaerica | exon |
| TCONS_00055140-exon-scaffold_251-1510915933:262013..262044 | TCONS_00055140-exon-scaffold_251-1510915933:262013..262044 | Clytia hemisphaerica | exon |
| TCONS_00055140-exon-scaffold_251-1575043694:262013..262044 | TCONS_00055140-exon-scaffold_251-1575043694:262013..262044 | Clytia hemisphaerica | exon |
| TCONS_00055140-exon-scaffold_251-1491911889:262974..263118 | TCONS_00055140-exon-scaffold_251-1491911889:262974..263118 | Clytia hemisphaerica | exon |
| TCONS_00055140-exon-scaffold_251-1510915933:262974..263118 | TCONS_00055140-exon-scaffold_251-1510915933:262974..263118 | Clytia hemisphaerica | exon |
| TCONS_00055140-exon-scaffold_251-1575043694:262974..263118 | TCONS_00055140-exon-scaffold_251-1575043694:262974..263118 | Clytia hemisphaerica | exon |
| TCONS_00055140-exon-scaffold_251-1491911889:263817..264182 | TCONS_00055140-exon-scaffold_251-1491911889:263817..264182 | Clytia hemisphaerica | exon |
| TCONS_00055140-exon-scaffold_251-1510915933:263817..264182 | TCONS_00055140-exon-scaffold_251-1510915933:263817..264182 | Clytia hemisphaerica | exon |
| TCONS_00055140-exon-scaffold_251-1575043694:263817..264182 | TCONS_00055140-exon-scaffold_251-1575043694:263817..264182 | Clytia hemisphaerica | exon |
| TCONS_00055140-exon-scaffold_251-1491911889:266263..266490 | TCONS_00055140-exon-scaffold_251-1491911889:266263..266490 | Clytia hemisphaerica | exon |
| TCONS_00055140-exon-scaffold_251-1510915933:266263..266490 | TCONS_00055140-exon-scaffold_251-1510915933:266263..266490 | Clytia hemisphaerica | exon |
| TCONS_00055140-exon-scaffold_251-1575043694:266263..266490 | TCONS_00055140-exon-scaffold_251-1575043694:266263..266490 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_251 | supercontig | scaffold_251:255488..266490 + |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008146 | sulfotransferase activity |
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
| Category |
Term Accession |
Term Name |
| molecular_function |
GO:0008146 |
sulfotransferase activity |
Blast
BLAST of TCONS_00055140 vs. Swiss-Prot (Human)
Match: ST1B1 (Sulfotransferase family cytosolic 1B member 1 OS=Homo sapiens GN=SULT1B1 PE=1 SV=2) HSP 1 Score: 101.293 bits (251), Expect = 3.473e-24 Identity = 82/266 (30.83%), Postives = 125/266 (46.99%), Query Frame = 2
Query: 266 GYFKNIENIKNFEFFEDDTVICGFLKTGTNWCERIVWALRNDIKLN------IQHAPPVSVFGIVMGIGDFDTDNNKANDKIFSSMKRPRVIKMHLPYELLXXXXXXXXXXMIYMLRNPNDVCQSLHSHFYTLQD--GFSGSLQDVVN-LMTDDAGYYSGPFFRHVLGYWKRRSHENILIIFYEEMKKDLSGHIKKIANFLDIEISDEEVSNLAKHFSFDSMKRKAEQMIPFHAKQDGHSATVEAAHKGKTMFNKGKVGSWKALFT 1036
+ N E I+ F DD VI + K+GT W I+ + ND + I P+ + M + T + +K S PR++K HLP +LLPK F + KMIY+ RN DV S + HF + + F G+ ++ + +T Y G +F HV +WK++ IL ++YE+MK++ IKKI FL+ ++DE + + H SF+ MK ++ + H T H KG G WK FT
Sbjct: 23 AFASNWEKIEQFHSRPDDIVIATYPKSGTTWVSEIIDMILNDGDIEKCKRGFITEKVPM----LEMTLPGLRTSGIEQLEKNPS----PRIVKTHLPTDLLPKSFWENNCKMIYLARNAKDVSVSYY-HFDLMNNLQPFPGTWEEYLEKFLTGKVAY--GSWFTHVKNWWKKKEEHPILFLYYEDMKENPKEEIKKIIRFLEKNLNDEILDRIIHHTSFEVMKDNP--LVNY-----THLPTTVMDHSKSPFMRKGTAGDWKNYFT 270
The following BLAST results are available for this feature:
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