TCONS_00055142 (transcript) - C. hemisphaerica

Overview
NameTCONS_00055142
Unique NameTCONS_00055142
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length1145

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00055142 ID=TCONS_00055142|Name=TCONS_00055142|organism=Clytia hemisphaerica|type=transcript|length=1145bp
TTTTGTTTTTATCTGTTCACCCACACAATTGATATCAAATTGGATTATCA
TTTTAGATATCTAGCAATTTTTAGAACATTTGAACAACTTACAGGAAAGG
CAGAATGGACGAGAGTAAAGACATACAAGAATATCATAGCGAGCCATTGG
AGAGCAAATTCATGGCTCCTTTTGCAAACATACCTTACGTTTCTAATGTG
CATTACGCTCGACCCTCCGATGTTTTTATACCAAAAggttattttaaaaa
cattgaaaatatcaaaaatttcgaGTTTTTTGAAGATGATACAGTTATAT
GTGGATTTCTTAAAACAGGTACGAATTGGTGCGAAAGGATTGTTTGGGCA
CTCCGTAATGATATCAAATTGAACATTCAACACGCACCCCCTGTATCAGT
TTTCGGCATGGTTATGGGTATAGGAGATTCCGATAGTGACAACAACAAAG
CTAACGATGAGATTTTTTCGTCCATGAAACGACCACGTGTTATCAAAATG
AATCTTACATATGAATTATTACCAAGACAATTTCAACAAAAGCAACCTAA
GATGATTTACATGCTTCGAAACCCAAATGATGTTTGCCAATCCCTTCACA
GTCACTTCTATACACTCCAAGATGGCTTTTCTGGATCTTTACAAGATGTT
GTTAATCTCATGACCGATGATGCAGGATATTATTCTGGTCCATTTTTTAG
ACATGTTTTGGGATACTGGAAGCGACGCTCTCATGAAAATATACTCATCA
TTTTTTAcgaagaaatgaaaaaagatttatcagGTCATATCAAGAAGATT
GCTAATTTCTTAGACATTGAAATTTCAGATGAAGAAGTTTCAAATCTGGC
CAAACATTTTTCCTTTGATTCGATGAAACGAAAAGCAGAGCAAATGATTC
CCTTCCATGCAAAGCAGGATGGACATAGTGCAACTGTCGAAGCAGCTCAC
AAGGGAAAGACAATGTTTAACAAGGGAAAAGTTGGATCGTGGAAGGCTCT
GTTTACACCAGACATGACAAAACAAATGGAAGAATGGGAATCGAAATGGT
TGAAAGATCATGATCTTAAATTCATTTATGAATAGTATTgtaatcccggg
gggggggtactacccttgtcgaccgacgggggggctccgccgagg
Run BLAST on NCBI

transcript from alignment at scaffold_251:255517..266490+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00055142 ID=TCONS_00055142|Name=TCONS_00055142|organism=Clytia hemisphaerica|type=transcript|length=10974bp|location=Sequence derived from alignment at scaffold_251:255517..266490+ (Clytia hemisphaerica)
TTTTGTTTTTATCTGTTCACCCACACAATTGATATCAAATTGGATTATCA
TTTTAGATATCTAGCAATTTTTAGAACATTTGAACAACTTACAGGAAAGG
CAGAATGGACGAGAGTAAAGACATACAAGAATATCATAGCGAGCCATTGG
AGAGCAAATTCATGGCTCCTTTTGCAAACATACCTTACGTTTCTAATGTG
CATTACGCTCGACCCTCCGATGTTTTTATACCAAAAggttattttaaaaa
cattgaaaatatcaaaaatttcgaGTTTTTTGAAGATGATACAGTTATAT
GTGGATTTCTTAAAACAGGTAGCGTTAGtattaaacgttttttttttttt
gtacatGTGTATATTTTGCATTgatatttccatttttttataCCTTCTGG
ACGTGGGTTTCACCCCTTGACAATATAATCTTATACCTCATTTTTACAGT
GTTTTTGTTCGTGAAGAGTCATTTTTCGCTAATTTCGATCATTCacacga
aaaataaaaatccgATATCTGGCGAAAATCTCAAggggaaatgaaaaaaa
tcgaaaaaaaagatACTGACTGAGCGGTTTAGAccaagaaaaactttgaa
gtcttattttgagaaaatttatcGGCTTAAGGTACTCTGAAGCTGTCGAG
TTGTCGAGGTAGGAAATTATGTAAGTTCAGGTTCTCGTTTTGAAGTTCAC
ACTAATTAGACAGTTGTCGATGAAAGACTTGAACCTGGAGACTCTCTATA
GAAACATTAATGTAATGATGTTTTATCGATAATTTTTAGGTACGAATTGG
TGCGAAAGGATTGTTTGGGCACTCCGTAATGATATCAAATTGAACATTCA
ACACGCACCCCCTGTATCAGTTTTCGGGTAAGTGAGTGTGTTGCatgtac
cagacgaccacggtTTTTCCCTCGACACCGAGTAATCAAAAAGtcgcgtg
ttgggatagagaAAGGTTAGTGAATGTACCAAAGTATGTAGCCCAATCGG
CGGTAAATTTTGTCTCTGGTGGGAAAAACACCCTACAATTTCCGCCCTAC
TGGAAACTTTTGCGTATtctaacgtttttcagaatttaaagatgGGGAGA
AAATTGCAGTTTGCAGGCTTCCAGGCTTTATTCTCAGCTTTATTGggaca
tttttgagcttttagatcctaaTATCCTCAGGTCCTAAGTCTAATGATTC
GGAGTtgaaactctactttccaaccgtacttaaaaaagcacttaaaaatc
acttgcggatTTCaaatttgagggaattccccttttgtgtcAAATATTAC
GGTGGGGATTGTGGGGGAGCAAGCAAACTAAAACATCTTTCAATATCACA
GCATGGTTATGGGTATAGGAGATTCCGATAGTGACAACAACAAAGCTAAC
GATGAGATTTTTTCGTCCATGAAACGACCACGTGTTATCAAAATGAATCT
TACATATGAATTATTACCAAGACAATTTCAACAAAAGCAACCTAAGGTAT
TTATAAATACTCTTTCTCACCTGAAAACATCAATAGAACCTGATAGAGCC
ATATTTTATAATAAGGCTAAAATAAGATGATGTTGGAAATTTTCATACTT
AACAAAATATAGCAAACAAAATAGATCAATAGACGATATATTGGCctcac
atgaaaactcagatttggcCCCCGAAAATTCTCCAcgatgctttgtgcgg
aaaaattTCACCATGAactttttccgcgcaaagcattgtagGCAATTTTC
GTCAAATCATTTCTACCTCCATGGTCAAAtatgagttttcacgttaagcc
aaTATATCGTCTATTGATCTATTTTGTTTGCTATATTTTGTCAGGTATGA
AAATTTCCAACATTGCCTTATTTTAGCCTTATTTCATTTGGTTAcgtAGA
AACCATCAATCGATagaatctaaaaattatatCGTCTATATTACTAGGCT
AATCAAATTATACTCAATACCAAGGAATAAATTCACTCAATCAATTTAAG
AATTTCCGTAGATAACGGGTCTGTTTACATACAAGTCCGATTACAGAAAC
CCAAATATTTGCCCTCCTCCTCCCCTCCCTCCCATATTTCATTACAAATC
ATCGGGAAACATCATTCTTTTCATATCACCAATAGATGATTTACATGGTT
CGAAACCCAAGAGATGTTTGCCAATCCCTTCACAGTCAATTCTATACACT
TCACGATGGCTTTTCTGGATCTTTACAAGATGTTGTTAATCTCATGACCG
ACGATGCTGGATATTATTCTGGTCCGTTTTTTAAACATGTTTTGGGATAC
TGGAAACAACGCTCTTATGAAAATATACTCATCATTTTTTAcgaagaaat
gaaaaaagatttatcagGTCATATCAAGAAGATTGCTGATTTCTTAGACA
TTGAAATTTCAGATGAGGAAGTGTCAAATCTGGCCAAACATTTTTCCTTT
GATTCGATGAAACGAAAAGCAGAGCAAATGATTCCCTTCCATGCAAAGCA
GGTCAGTGGTcataaatttttaaaacctttgCTGAAATTGCAGATGGAAA
AACAATTTAGCACAATCAAATCCTAATTTAATTAGTATAATAAGGCGAAG
CAGTGGAGTAGATATCCACCTTCGTTTTCATGTAGAAGGTCAGGTTTTGA
TTCCCATTCAGTGCAATAAATGGTTTGACCAGTGAATACTCCTTTATCCT
ATTTCTCCAGTTTCATAATAccagttttatatttttcaggaagGTCATAG
TGCAACAGTCTTTGCAGCTCACAAGGGAAAGACAATGTTTAACAAGGGAC
AAGCTGGATCGTGGAAGGCTCTGTTTACATCAGAGATGACAAAACAAATG
GAAGAATGGGAATCAAAATGGTTGACAGATACTGATCTTAAATTGATTTA
TGAATAGTATTGGAGTATCGAAACATGTAAAATGAGAGTTAAATAGAATT
TTGAAACGAGTAAAATGACTGTTCTTAAATTAAAAGAATACGTGTGATAG
AAATTCCATTTTCCATTTTTGATTCCGTTTAATCCAAACGATAAAAATCA
AGTGCACAAactctttttattgaaataatctagttattttgtatattttt
aacAGGTCAATAACAGGTCAATATTTAAAGAATGAAATAACAATAAGAGT
ATACTCGATATATTTTGACAGCATTTTGCGGCGATTAAATATTTTGCGGA
TAAAATCTTTGGGACTTCCGTGAAATTTAATCTCAGCGAAATTTTACACC
ATTAAAGCAAGGATTTactatacactggatatactttaatgggataaatt
ttcgcggggattaaatttcgcggttgagctcatccgcgaaattttaagat
ttcgcggggattaattttcgcggatgNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtt
tgatgcaagtaaccattcaaatagtatttatttgacatattttgagtttt
gtttagaaatatttcgcggatgggcctttttcaaatttccaacgggattt
attttcgcggatgacacccaaatccgcgaaatccgcgaaaattaatcccc
gcgaaaatttatcccattaaagtacaagtaacagatttttgccgatttct
cgtgtactagctataatgtccgcagtaatgatattattgttcactctcct
tccctcattaaatgacttttcgaagcatttttattgcatttcttattgaa
aatcactcatccaattcccaaaagagacttaaatctttcctgtgagagtc
aaattcttccacttaattgctaattataagtcgttatgacgcggtttcaa
gctgtgagaaagatgcaaaagacgtgttgtgtataagaaatttaatgtcg
acaccggaaattttcaaacttcaacctcaaaaaaaccacttTGCCatcac
gtgcctccaaaggattttcataccacagtggagccaagatactcaagtct
tatgtatattaatttcagctcttctggggacagtcttggaaagatatttc
caattgaaaatttcgtgtcactataagcattttgtctgaatttcttgtct
aatgatgtttttctcatattacatttcacaaatgtatccagctcggaatg
ctagccttactttcaaactttttttcttcaaatgtacgaaaagaaagagc
tagagaactttttaaaaataagactgataaacatttttaaaaatcagaca
tcttcgagtaacctgagatcagattgtggttgttttctgcccaccacgct
gaagctctaaagggatgggttaaaacatacaatctgacgaatatgcaaac
tcgaaatcgtaaggactgcATTCGTCTAAAAGggctggggatgacaacaa
aattgcgtgattgtgtttatgagtagggcgccgtatcagtttttgacttt
ctggcgcgcAACAAGactcttgttgtaaaattttccgcagGAGGattatt
ttcctcagatgtataattttcaagtgccttcagaagtttaccgtgcacgt
aagaaaattatgaacagctgttatcaggttatctTCGAGCCGctatgaca
gttgtcctttgcggacaaagctagaacatcaattgttttctgaaacaatg
aaaatacaatgatcgctctccatcgttttatgagtCGTTTATCCAGTGTA
TAATAAATCTCTGATCAAAGTATTGAGTTTCCCAGGTTTTTCAAAACAGG
TTTTTCCTTATTTAATagcgttttttggacaaaaatgtccttcgtccgcc
aaattaaattatcccgccagacttaatttttcaaGTCAACCGCCATATTA
AATTCtctatgaaaattatttttggccaTATCCCCCAATAAAAtaaattc
ccgctaaaatttctgCCTTTAATCTAGTGCGAgaatagcgagcacctcac
taaaaaccgggattttttatctcgtttcttagtgagttccactttgacga
ttttcgaaaaatagaagcctttcaagtgttttgNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgagcccgaaaacccgggctc
aaaacattcgaaaaagtcgcaaagtggaatagacgttaattgcgtaaaaa
aacgcgggtgacgtctagtataggctagtgCGAGAATAAATATATTGTTT
TCCCAATGGGGTGCGAAGTCAGGCTATTTACCATACATTAACTTTATTTC
ATTTGGTTACATAGAAACCATTGATCGAtagaatctaaaaatttcaCAAT
CAATCGAAAAAAATGACGATTACAAACACAATATTAAAATGAATTAATTT
AATAGATAAAACAGTAGATAGTTATTAAAGATCTAAGGTAATCGGATTAT
CATTTTAGATATCTAGCAAGTTTTAGAACATTTGAACAACTTACAGGAAA
GGCAGAATGGACGAGGGTGAAGACATACAAAAATATCATAGCGAGCCGTT
GGAAAGCAAATTCATGACTCCTTTTGCAAACATACCTTACGTTTCTAATG
TGCATTACGCTCGGCCTTGCGATGTTTTTATACCGAAAggctattttcaa
aacattgaaaatattaaaaatttcgaattttttgaaGATGATACAGTTAT
ATGTGGATTTCTTAAAACAGGTAGCTTTAGTATTtaacgtttttttttgt
ttgcacATATTAAGCATTGATATTTCGATAAAAATATCGCTTCTGGACGT
GTGTTTCACCTCTTGACAATACAATCTTCTACCCCCTTTGCACAGTGTTT
TTGTTCGTGAAGAGCCACTTTTCGCCAATTTAGAAGATTTCCTCGAAAAA
TAGAAATCCAATTTTTGGCGAAACTctcaagaaaaaatgaaagaaatcga
TTATAAAGAGACTGATTGAGCAATTCAGACCAAGAGAAACTGTGAAGtct
tatttttgagaaaatttattCGCTTAAGCAAGGGACTCTGAAGCTGTCGA
GCTGTTAAGGTAGGAAATGTTATAATTTCAGGTTATCATACTAAAGCTCA
CACTGCTTAGACAGTTGTCGATGAAAGACTTGAACATGGAGACTCTCTAT
AGAAACGTTAATGTAATGATGTTTTATCGATAATTTTTAGGTACGAATTG
GTGCGAAAGGATTGTTTGGGCTCTTCGTAATGATATCAAATTGAACATTC
AACATGCACCCCCTGTATCAGTTTTCGGGTAAGTGAATGTATTGCCTGCA
tcagacgaccacggcttttcCCTCAACACAATCGTTtgttgggatagaga
taggTTAGTGAATGTACCAAAGTATGTAGCCCAATCGGCGGTAAAATTTG
TCTCAGGTGGGAAAAGACTCTACAATTTCCGCCCTACTGCAATTTTTTgc
gtattttaacgtttttcagaatttaaagatcgggagaaaattgcagtttc
agtacttccactttgtttcattggatttttcgatttgtgAGGGGTTAGGT
GGCTTCCAGGCTTTATTCTCAGCTTTATTGGGACAGTTtcgagcttttag
atcctgagatccttaGGTGCTTCtgaagtcttaagtctcatgttaaaact
caaagttaaaactctactttccaaccgtactttaaagcacttaaaaatga
cttacggttttcaaatttgagggaattccccttttgtgtcAAATATTACG
TCGGGGATTGTGGGGGAGCAAGCAAAGTAAAACAACGGTCGCCCTGTTTT
TTCATCCCAATCTAAGAcgaacaaaatatttgaaacatatGATTGTAAAA
AGCTATTACCCAAATAGGGGCCAAATAGTAATAGAAGACAAAGGAGATGT
TTTACATAGTTGCCACTCTCGCATTCGATGTTCAAGGGGTCAAGAATTTG
CTTCAAGTCAGAGAAATACTTGAATTAGAGAGGACTTTGTATGAATTTCC
ACCAGAGGGAACCAATGGTTTAGTTCTGATTACAGAtaaattcgaattaa
agaggttcgaattagaaaaaTATGACAATAGGAAAATAATAGATAGAGAG
TTGCCCTGGTTCAGTAAATTTTGTAATCTAAACTTTCCAGAAGTTTAAAA
GTTTCCCATACATCAAGCACTGTCTTACCAAAGAATTATCATCTTTCAAT
ATCACAGCATTGTTATGGGTATAGGAGATTTCGATACTGACAACAACAAA
GCTAACGATAAGATTTTTTCGTCGATGAAGCGACCACGTGTTATCAAAAT
GCATCTTCCATATGAATTATTGCCAAAACAGTTTCAACAAAAGCAACCTA
AGGTATTTGTCTCTTTTTCACCTGCAAACATCAATAGAATCTGATAAAGC
AATTTCAAAATAAGGCTAAAATAGGGCGATGTTGGAAATTTTCATACTTG
GTAATATATAGCAAACAAAATAAATCAATTACAAACTATACTCACTACCT
GAGTGcacgtttatcgtttcgtagtactctacgaaaaatcaataaaaaaa
tttctgtaGATAATGGGACTGTTTACATACCAGTCAGATTACAGAAACCC
AAAAATTTGACGTAACTAAACGAAAGCATTTTTCTCTAGTgaccgtagtg
tagtggtagaacatccggctacggttcgcaaggttgtgggttcaaccccc
aaccggatcataccaaagattctcaaagtgGTACttaatgcctctctgct
tgatgctcagcaatagacgatatcggatttagataaatgcaatgcattct
ggtttctagggactctcaaaggaattataatagatcaattataatagatt
ataattcctttgagagtccctagaaaccagaatgcattgcatttatctaa
atccaaTATCGTCTATTAAGAGAAcgatccagggagaaagagtggcaccc
tcctCTACCTTCAGGGAGTTAGTTATCGAAATAGGAGCCTTCTGGACGCC
TCCGACTGCAGTCGACttacttacttttttctttctttatatcACAATAG
ATGATTTACATGCTTCGAAACCCAAATGATGTTTGCCAATCCCTTCACAG
TCACTTCTATACACTCCAAGATGGCTTTTCTGGATCTTTACAAGATGTTG
TTAATCTCATGACCGATGATGCAGGATATTATTCTGGTCCATTTTTTAGA
CATGTTTTGGGATACTGGAAGCGACGCTCTCATGAAAATATACTCATCAT
TTTTTAcgaagaaatgaaaaaagatttatcagGTCATATCAAGAAGATTG
CTAATTTCTTAGACATTGAAATTTCAGATGAAGAAGTTTCAAATCTGGCC
AAACATTTTTCCTTTGATTCGATGAAACGAAAAGCAGAGCAAATGATTCC
CTTCCATGCAAAGCAGGTCAGTGTGAaacgattttttcaaaatctttgct
gaagatgagtaaaattatttaaaaagaagATGCCGTCATAATTAACAAAT
AACGTcgaaattttttacattgaattttgagatttagtaaaattaccaaa
agtttttgaaaatttaaagtaattGGCTTTATGGATTTCAATGAATTCCA
CGATTTTGTGATTATTCAGGAtgttagctggattttatgaccAATGTGTT
GCAATAAAATCATAAATGGGTTTTTTGACTCAAAATTTTGTAGACTTATG
cattaaaagattttgttaaagTCATAAAGGTTTGTTTGCTTTgaaaacag
ggggggggggtcttgcagttactccttgacactatgtggagtaactgcaa
ttttggacattttctNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATGCCGTCATAATTAACAAA
TAACGTcgaaattttttacattgaattttgagatttagtaaaattaccaa
aagtttttgaaaatttaaagtaattGGCTTTATGGATTTCAATGAATTCC
ACGATTTTGTGATTATTCAGGAtgttagctggattttatgaccAATGTTG
CAATAAAGTCATAAATGGGTTTTTTGACTCAAAATTTTGTAGACTTATGc
attaaaagattttgttaaagtcagaaagttttgcgtgctttgaaaaatgt
aaaagagtGCAGGGATGGTTTAAATTACATCCTGGTAAAAATAAAGTTTA
ATCCATAGATTTCTAAAGCCcgaaagggctagatgtcgcgCTTTGGCTGG
AAAGTGTACCGTATCTCGGTAGAAAATTCTACCTatgtcacgtgacatta
caatagaatttcagcccttgaccaatcagaagctttgcggaTTTTTGAGA
ATAGCAGCTATATTTCTTGCgctatttactttttttcgccTGTGattggc
ttaaagcacgacatctagcccttcgggctttataaattaTTGGTTTAATC
CAGGTGAAGGAGGAGAAATAACTCGTATACAAAAAAGAAGGAGACCTCTG
TGGTATTGTATCAACCTTTGTCAGCTTCGTCTGTACTATagcactttgta
ataaaaataaacacaTTTTGTTTTTACAAATTGAATAATTTTCCAGGATG
GACATAGTGCAACTGTCGAAGCAGCTCACAAGGGAAAGACAATGTTTAAC
AAGGGAAAAGTTGGATCGTGGAAGGCTCTGTTTACACCAGACATGACAAA
ACAAATGGAAGAATGGGAATCGAAATGGTTGAAAGATCATGATCTTAAAT
TCATTTATGAATAGTATTgtaatcccggggggggggtactacccttgtcg
accgacgggggggctccgccgagg
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034746XLOC_034746Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00055142-exon-scaffold_251-1491911889:255517..255834TCONS_00055142-exon-scaffold_251-1491911889:255517..255834Clytia hemisphaericaexon
TCONS_00055142-exon-scaffold_251-1510915933:255517..255834TCONS_00055142-exon-scaffold_251-1510915933:255517..255834Clytia hemisphaericaexon
TCONS_00055142-exon-scaffold_251-1575043694:255517..255834TCONS_00055142-exon-scaffold_251-1575043694:255517..255834Clytia hemisphaericaexon
TCONS_00055142-exon-scaffold_251-1491911889:256306..256393TCONS_00055142-exon-scaffold_251-1491911889:256306..256393Clytia hemisphaericaexon
TCONS_00055142-exon-scaffold_251-1510915933:256306..256393TCONS_00055142-exon-scaffold_251-1510915933:256306..256393Clytia hemisphaericaexon
TCONS_00055142-exon-scaffold_251-1575043694:256306..256393TCONS_00055142-exon-scaffold_251-1575043694:256306..256393Clytia hemisphaericaexon
TCONS_00055142-exon-scaffold_251-1491911889:256868..257012TCONS_00055142-exon-scaffold_251-1491911889:256868..257012Clytia hemisphaericaexon
TCONS_00055142-exon-scaffold_251-1510915933:256868..257012TCONS_00055142-exon-scaffold_251-1510915933:256868..257012Clytia hemisphaericaexon
TCONS_00055142-exon-scaffold_251-1575043694:256868..257012TCONS_00055142-exon-scaffold_251-1575043694:256868..257012Clytia hemisphaericaexon
TCONS_00055142-exon-scaffold_251-1491911889:263817..264182TCONS_00055142-exon-scaffold_251-1491911889:263817..264182Clytia hemisphaericaexon
TCONS_00055142-exon-scaffold_251-1510915933:263817..264182TCONS_00055142-exon-scaffold_251-1510915933:263817..264182Clytia hemisphaericaexon
TCONS_00055142-exon-scaffold_251-1575043694:263817..264182TCONS_00055142-exon-scaffold_251-1575043694:263817..264182Clytia hemisphaericaexon
TCONS_00055142-exon-scaffold_251-1491911889:266263..266490TCONS_00055142-exon-scaffold_251-1491911889:266263..266490Clytia hemisphaericaexon
TCONS_00055142-exon-scaffold_251-1510915933:266263..266490TCONS_00055142-exon-scaffold_251-1510915933:266263..266490Clytia hemisphaericaexon
TCONS_00055142-exon-scaffold_251-1575043694:266263..266490TCONS_00055142-exon-scaffold_251-1575043694:266263..266490Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_251supercontigscaffold_251:255517..266490 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.497286	1.04245	0.42115	0.245796	0	0	0	0.152616	0.504982	0.177756	0.499138	0.135317	0	0	0.130141	0.483329	0.000296295	0.187262	0	0.184517	0	0	1.79391	1.81581	1.06531	0.813596	18.5335	33.7384	0.162841	0.102039
Blast
[Close]
BLAST of TCONS_00055142 vs. Swiss-Prot (Human)
Match: ST1B1 (Sulfotransferase family cytosolic 1B member 1 OS=Homo sapiens GN=SULT1B1 PE=1 SV=2)

HSP 1 Score: 106.686 bits (265), Expect = 4.493e-26
Identity = 78/265 (29.43%), Postives = 123/265 (46.42%), Query Frame = 3 
Query:  237 GYFKNIENIKNFEFFEDDTVICGFLKTGTNWCERIVWALRNDIKLNIQH----APPVSVFGMVM-GIGDSDSDNNKANDEIFSSMKRPRVIKMNLTYELLPRQFQQKQPKMIYMLRNPNDVCQSLHSHFYTLQD--GFSGSLQDVVN-LMTDDAGYYSGPFFRHVLGYWKRRSHENILIIFYEEMKKDLSGHIKKIANFLDIEISDEEVSNLAKHFSFDSMKRKAEQMIPFHAKQDGHSATVEAAHKGKTMFNKGKVGSWKALFT 1007
             +  N E I+ F    DD VI  + K+GT W   I+  + ND  +           V +  M + G+  S  +  + N         PR++K +L  +LLP+ F +   KMIY+ RN  DV  S + HF  + +   F G+ ++ +   +T    Y  G +F HV  +WK++    IL ++YE+MK++    IKKI  FL+  ++DE +  +  H SF+ MK     ++ +      H  T    H       KG  G WK  FT
Sbjct:   23 AFASNWEKIEQFHSRPDDIVIATYPKSGTTWVSEIIDMILNDGDIEKCKRGFITEKVPMLEMTLPGLRTSGIEQLEKN-------PSPRIVKTHLPTDLLPKSFWENNCKMIYLARNAKDVSVSYY-HFDLMNNLQPFPGTWEEYLEKFLTGKVAY--GSWFTHVKNWWKKKEEHPILFLYYEDMKENPKEEIKKIIRFLEKNLNDEILDRIIHHTSFEVMKDNP--LVNY-----THLPTTVMDHSKSPFMRKGTAGDWKNYFT 270
The following BLAST results are available for this feature:
BLAST of TCONS_00055142 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
ST1B14.493e-2629.43Sulfotransferase family cytosolic 1B member 1 OS=H... [more]
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