TCONS_00055169 (transcript) - C. hemisphaerica

Overview
NameTCONS_00055169
Unique NameTCONS_00055169
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2724

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00055169 ID=TCONS_00055169|Name=TCONS_00055169|organism=Clytia hemisphaerica|type=transcript|length=2724bp
GGAATACCCACACAACAGTATTCCTTGGGAgccactcaaaataatttcaa
agACCCCTCAAAAGTCGTTCTCAACCTCCAAGCAGATGCAACAAGTTTTT
CTACCATTCAAGTCACTTGGGATCTGGACCCGAGTGAAGAAAATTCCATC
AGTGGTTATCATGTGACTTACACCGGAAATGATACAACCAATCAGAGAAC
AGTATTCCATCCATCGACTTTTATTGGTTTAGAAGATTTGGAACAATGGA
CAGATTACGTCATTGAAGTTTGCTCATTTAATTCTTTCGGTCAAAGTCCT
TGTCAAACTACTGCTGCAACTACTCTCATGAAAGACGGACTACCAGAAGT
CGAAGTATCAGGGTTGGAACAAATTTACAAGACTCATAACGAGATTCACC
TCTCTTGGTTACCCCTGGAAACAACAATAACAGAAGATCTAATGGGTTAT
CATGTGAAGATCTGGCTTCATATGCAAGATGGTAGATTTGTTGTGGGAAG
TTCTGTTGCTGAAGAAAGTGTTTCATTGGCAGTCAATAGTTTTCGGTTTT
CATCACTGGAATCGAATTCAATTTACAAAGTCAGTGTTTCTGTGGAAAAT
TCAAGAGGGAAGGGTCAAGAAAGACTCATAGAGGCGTCAACGTGTGCATG
CGACGAAATTATTTACACCAACTTCTTTGTACAACCTCCTTACACAAGCA
TCGATGTTAATTCCCAATCCTTTGAGCTTCAATACAATGGCTTATTTCCT
GATCTTCTCAAGAAAATCATCCCAGAAACATGCGGTGTTTGTCAAATGAC
TTCAACACAAAATTACACAACTCAACTTTCTTTGAAAAGTAATGGTAACT
CTGGGTTAGCTTTCAAACGAAAATATCAACGTGTCTTGGACGATATCGAT
TCCACGTCTAAAATCACTTtcccaatgacgtcatcacctaaCGACCAATC
AAAATTCGTTTCCATAATCGATTATCCGGGAGCAGTTTTATTGAATCGGA
AAGTGGACTCTGAAGAATTGGTGcatcaaattttacaaaaattgtcGAGT
TGTTGGacgattgttttcatttatctCCTGTTGTGTGTTTTATCTGCTTT
GGTGTTGTGGGGCTTGGATCATTTCTCGTTTTCCACCAATCAACAATTTT
CCAAATCACTAGCTGACGGATTGAAAGAAACGTTTTATTATGCTTTCATA
ACACAATCGACTGTAGGATATGGAGATATGGTTGTGAAGACGAAACGTGC
TCGTTGTTTTATTATGTTCTGGATGTTGGTGTGTCAAATCTTAACTTCGC
TCATTGTGGGTGCATTATCTTCAGCTTTTACAACTGTTGTCATTGAAGAT
GTTTCTCTATATGGGAAAAAGGTCGGTGCCCTAAAAGGATCATTCGAAGT
GAACCTGGCCATTGTAAGGAATGCTGAAATTGACAATGgcaccatttaca
cgaCACCAACCGAGTTGTTAACAGCTTTAACACAAAAAGAGGTGGACGGG
GTTTTAATGGACTCTTATACAGCTTCAAGCATGCGTAATGCTATTGATTT
ATCGGGAGCGCATCCAGTTAAATTAGTTGAATATCCACGTTACTATGGAG
TTGTTTTGTCAGGTCATTTGAAATATATTGCACACTCTATGGAAGCAAGT
ATTCATTTCCATGAAAAGGACATTGTTGAAATGATTGCTGGACAGACTGA
CAAAATGAAGGTTAGTGATTTTTTCTCTTAATNGGAAATGATTGCTGGGC
AGACTGACAAAATGAAGCCACCGAACAAGTTTGAAACATACACATTATTC
GATACGAATTCACCGACATTGATGGACGCCATCAAAACTTTATTATGGAT
GCTGTTTACCGCTGTCGTTCTTGGTTTCATTTTTTCCGCGTAtcgatttc
ataaaaaacgaacCCAGATTATTGACATCGATAATACTGTTGACACTTct
CTATCTATTCGTCCCATATGGAGAGAAGTCATCAAATTGCATTATCTGTT
TTGTCATCGAGTgtataatttacagaccagaatggaTCAAGAAAGAATCA
AATTATATCGAGACAAAGGAGCAAGTTCTTTGAGAAACAATAACCGATTT
CATTTATATTCTCGGCAGAAATATTCTACAGTTGGCAATGAGGGCTCAGA
TACAAAAATTGCTCAAGCTTTTCGAAAACTATCTCGACTTTCAATCACAA
GCAACTCATCTACGAAAAGCTATAATCGACACTACGATGATTTGGAACGA
GGAGAGTGTTCCCATAGTAACAACAATAATGACGTGTCGGAAAAAACTTT
TCGTAAGATTTCGATCTCCAAAAGAAAGAGACGTGGTAAAGAGAGCATTG
CTGGATTTTCAAGACTTCATGATTTAGAAGAAGAACAAGAGAGAACACAA
AGTGATTTTTCAATGCGTTCTCCCAGCCTCGCTTCCATGCGGAGCTACAA
TGAACGTATCAAAGATCTTGATTCCGATTTGGATTTGTATAATCAGGGAT
ACGACGAATCCGATATTGAAAGTGacttatcgggaaatcgggattCGAGT
GATGAGGGTGAGAACAGAGAAACCGATTCGGATTCCTCTGACAGTAATTG
AAATATTGATCATTCACATGAGGCTGGGAAGCTCAATACTTTAATGGTAT
AACATTTCGCTGATATTGAATTTCACagaagtcccaatggaaatttggaa
atgCCTTATTCGCAGAATATTTCC
Run BLAST on NCBI

transcript from alignment at scaffold_251:448761..459248+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00055169 ID=TCONS_00055169|Name=TCONS_00055169|organism=Clytia hemisphaerica|type=transcript|length=10488bp|location=Sequence derived from alignment at scaffold_251:448761..459248+ (Clytia hemisphaerica)
GGAATACCCACACAACAGTATTCCTTGGGAgccactcaaaataatttcaa
aggttaaaaaaatatctttatgATTAAATTTCTTCTGTGCCCACCAACTT
TAGGTAGGTTGGTaggagacttaaaaaattggTCATTTCAGCTGAAATCT
TTCTCTTGATTCTTGCGTGAATTctctcgttttttttttattagctCAAA
ATTTTCGATCTTTTGGTGGTAacatttttttgccaaaattgggTTATCAT
GATCATCTTAGCTTGCTTGTTGATTTTACAACTTGTAAAATCACCTGAAT
TTGTTTACAACGTTCGATagtatttttatgattttacaGCAGATTTATTC
AAATGAAATTCAATCAAGCTCTATTTCTACTTTTTAGACCCCTCAAAAGT
CGTTCTCAACCTCCAAGCAGATGCAACAAGTTTTTCTACCATTCAAGTCA
CTTGGGATCTGGACCCGAGTGAAGAAAATTCCATCAGTGGTTATCATGTG
ACTTACACCGGAAATGATACAACCAATCAGAGAACAGTATTCCATCCATC
GACTTTTATTGGTTTAGAAGATTTGGAACAATGGACAGATTACGTCATTG
AAGTTTGCTCATTTAATTCTTTCGGTCAAAGTCCTTGTCAAACTACTGCT
GCAACTACTCTCATGAAAGGTCAGTGcgtattttgtacatttttctaTGA
TTTAAATACTTTTATATCGATATGTCCTGCACCAAACTCGTGGAAAAACG
CCGCAAAGTGTGGTTTGTTACGGTCAGAGTGCCACCTCGTGTCTGCAATA
TTAGTTCacaaacacccccttctcacagaacccttcccactggaaaaatt
ggcaaaaatatatcatccccagtggaaaataataagcagatattcaatgg
gtaaaagttggttactgagatttattaacccgaggtgatgtaatattcaa
cgaggcgaagccgagttgaatatacatcaccgagggttaataaatccaat
aaccaacgaaaacctattgaatNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCAATAG
CTAAACGTTTCacttaaaacactcccataatcgaacgttcgaatgttttt
ctttcttaatgattttcttaattactttaagtcataaaatttgtctatga
aattgacaatagatttattttaatgaatttctttgataacaaccaaagca
acaaaaaaatcaaactttgaaagcaaaatttgaaaacaaaattctaccgt
ggtataatagccatggtatatcaggaattattcaatggctgtttttgcct
acaggtgtataataataattattattatttccttgatctccaaaaaatat
tggttcttcttacaagaaaagtgttatataatgtatatgctgtgtgtata
aaatatataaataactaaACTAACAACTCGAACAGATACGGGAAGAAGGA
CTCATCGGAAGGAATAAGGAAAACTAAGTGAAGCTCGGAATCAGAATACT
GAGATATGACGTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNaaaaatagaaaaaatcacacaaaaactgaaaagaatag
AATCGTAAGTTGGCcgagaacccggttcggcgtgccgcgacGGGAGAACT
GCACAGGGCAAAAAAAAGTAGGAAAGTAGGACTCTGCTTTATAGATATAG
ATTTATTAAGCATAAATGTAAATAAATGTTAAACTAAGTTAAAGCTCAAT
GTGTCAAAACCTAAGGTAAGCTTCAATGAAAGGAAAGGATGAAGTTAGGT
TAGGATCTTGAAGTAGTAAAACATTAGAATTCGCAACACTGTCAAGAATA
TAGTTATTGAGATACTTAGGTAACNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNTAACATGCTCAGTCCAATCAAGATGCTCGTTGAATTTGACGCC
GAGAATCTTGAAGTTCTGGACTCTTTCGATGTCTTGGCCGGCACTTTTTA
TCTCGGTGACCAAATCAGCAAGCGAGTGGCGTTGTGCTAGCTGTCTGGTT
GAAAATCCagtcatttttgttttcttagcaTTCAAACAGAGATTATTTCG
GTCCGACCACTGGTTAATGTTATCGATCTCTATCTGTACGGATTCGATAT
ATCTGTATATCTTTGATTTTTGCGTGACGTAGTAGTGTTGTATCGTCAGC
GTAGAGAAGATAGGTACTCTGACCATTAGTATTTATTGTGGTAATGTATA
AGTTAAACAGAATAGGGCCGAGTATACTGCCCTGTGGAACACCAAACTGA
ACGTTTAACTTGTTAGACGATTTGTCGTCGATCTGAGCGTACTGTTTACG
GTTGGACAGATAATCACCGATAAGAAATAATACTCTAATTATACTTTAAT
TTTTGTCCCCTCTGAAAATaaccagataagcaaatcctcagtgcaaaata
ttgtgctattttttccatcccggCTGAAatttctggctagaaaacaatgg
aattcaagtCCCTAGCTATAAAAACATAAGAATATCAAtcatccccatcg
agttttggttcattatttttacccccactggctgataaaatcctaccggg
tttgtgagaagggggtgttcgcAAGTTCCCCTGAGATTCTGGGGTGGAGA
GTAGAGCTACTAGAATTTGAAACAAACCTAACTAAGACACACTATTTTAT
CCACCGCAATACAATGGTACCTTGGacaaagtttctcaatcccggccaag
caaaatattatgatcggagttttttaaaaTTGGTACCCGTGGGGGGAGCG
GGTACCAATAAAAAAAACGGTGggtatagcttggtccagggatatataaa
ggtcggTGACTCTGACGCGCTTCTTTATGATTATTTAGTATGTACCCAGC
ATGACGGTCGAAATTTAGAACGTCTTTTAGAAAGCACTCAAGACTTCATA
TATATAAAGTCATTCTACTGAACTCATCCATATTTATAGACGGACTACCA
GAAGTCGAAGTATCAGGGTTGGAACAAATTTACAAGACTCATAACGAGAT
TCACCTCTCTTGGTTACCCCTGGAAACAACAATAACAGAAGATCTAATGG
GTTATCATGTGAAGATCTGGCTTCATATGCAAGATGGTAGATTTGTTGTG
GGAAGTTCTGTTGCTGAAGAAAGTGTTTCATTGGCAGTCAATAGTTTTCG
GTTTTCATCACTGGAATCGAATTCAATTTACAAAGTCAGTGTTTCTGTGG
AAAATTCAAGAGGGAAGGGTCAAGAAAGACTCATAGGTTTGTACTTTTGA
TCTATTGTACGGTATTGTACTGAAACATTAATTCGAAAGTTCGAACAact
aaattttcattaattcattaattcattaattcattcattcattcattcat
tcattcattcattcattcaatttCTTGATTTCAGAGGCGTCAACGTGTGC
ATGCGACGAAATTATTTACACCAACTTCTTTGTACAACCTCCTTACACAA
GCATCGATGTTAATTCCCAATCCTTTGAGCTTCAATACAATGGCTTATTT
CCTGATCTTCTCAAGAAAATCATCCCAGAAACATGCGGTGTTTGTCAAAT
GACTTCAACACAAAATTACACAACTCAACTTTCTTTGAAAAGTAATGGTA
ACTCTGGGTTAGCTTTCAAACGAAAATATCAACGTGTCTTGGACGATATC
GATTCCACGTCTAAAATCACTTtcccaatgacgtcatcacctaaCGACCA
ATCAAAATTCGTTTCCATAATCGATTATCCGGGAGCAGTTTTATTGAATC
GGAAAGTGGACTCTGAAGAATTGGTGcatcaaattttacaaaaattgtcG
AGTTGTTGGacgattgttttcatttatctCCTGTTGTGTGTTTTATCTGC
TTTGGTGTTGTGGGGCTTGGATCATTTCTCGTTTTCCACCAATCAACAAT
TTTCCAAATCACTAGCTGACGGATTGAAAGAAACGTTTTATTATGCTTTC
ATAACACAATCGACTGTAGGGTAAGATTGGCACCTTTTTTGTAAGATTTA
aggaataaataatatttttgacaacTAAACACTTGTATAATTTGAGATAT
AGCGAGGTGCGCTAAACCatccaaaaattatttctggGCATGTCTTTTCT
TTCGTTATTCATCGTCACCTTTTGAACTATGTTCTCATTTGATATATTTT
GTGGAATCACTCTAGATATATTGAAGAGTTAGGTAGGAATGTAACATCCC
CAAATTTACAGCTTTTTCTCTCGGCTTGATAACACAGTACTCTTCATATG
ATTTTTACTTTATTGTTTTCTAGATATGGAGATATGGTTGTGAAGACGAA
ACGTGCTCGTTGTTTTATTATGTTCTGGATGTTGGTGTGTCAAATCTTAA
CTTCGCTCATTGTGGGTGCATTATCTTCAGCTTTTACAACTGTTGTCATT
GAAGATGTTTCTCTATATGGGAAAAAGGTAATAATCCAACTTCTTCAATA
GCAGTTTAGTCCACGAGCTAGAAATCATCCCCCTAATTTTCTGAAGTTTC
AATCAAGTCAATCTTAATGACATGAATATCCTCTGGATTTTCTGATGTAA
AACAATTCTTAATTTAAAGTGATTATTTTAAAGCATTCTTTTATTTACCT
TAGGTCGGTGCCCTAAAAGGATCATTCGAAGTGAACCTGGCCATTGTAAG
GAATGCTGAAATTGACAATGGTTAGTGGAACttcaaaatttcctctcttA
AAGGGtcaaatttggacaaaaatcgagtgaaaatcgacaaacattttgag
aaaagtctctctaagggtcccaaaaacgccaatttttcctccctctctaa
gggtcgattttcgatttttggcttggcatacctgtcacctcgcaaaccta
ttCCCCCGCTGGCGTTTCTCTATCTATGACATATTTCCTGATATTATTTG
CCAAATTATTTTCAGAACCATTAGCTGAAagcttttgattgtttttgaag
tttttagtGAATCTATAAAGTTCGTGGAAATTTTCAGGGAACTGAAGAGC
TACCTAACAGCTCTACCTTGATTaggaaattcatgatattcatgacgtaa
tgttttctacggaaagaccccggtctttgccagtagtggcaaattttata
caacatTTGTCtattttaaatttgccactactggctaaaaccggggtatt
ttcgtagaaaacattactaagcaaagaatttttcaaaagattacagtttt
ctctttaatcatcttaaggcaccatttacacgaCACCAACCGAGTTGTTA
ACAGCTTTAACACAAAAAGAGGTGGACGGGGTTTTAATGGACTCTTATAC
AGCTTCAAGCATGCGTAATGCTATTGATTTATCGGGAGCGCATCCAGTTA
AATTAGTTGAATATCCACGTTACTATGGAGTTGTTTTGTCAGGTCATTTG
AAATATATTGCACACTCTATGGAAGCAAGTATTCATTTCCATGAAAAGGA
CATTGTTGAAATGATTGCTGGACAGACTGACAAAATGAAGGTTAGTGATT
TTTTCTCTTAATNGGAAATGATTGCTGGGCAGACTGACAAAATGAAGGTT
AGTGACTTTCTCCCTTAACCCTTTGTGCGCGctgcttttttgaaaaagaa
atttttctaaattatttttttgaaactcaaaactttaaagtacCATAAAA
GATTGTACCTTGATGATGATTTTGGTACCATTAGAAAGTTAattttatac
tctttctaaaaacattaggtttatgcccctttaaatcaagtggtcagggg
CTATAGCCTCAAGTCTGAGACTcagtattttggcttgttttggacgCATA
TACGCGTCCGAGGGATAAGGGTTAATAGCCCTGTCGTAAGACATAATTGa
cattgtcaaaaaaaaataaagaattcccTTTCATTCACCGTATACCTCTT
GTAGCATTTGCGATCCCTGAAAATgcatataaaatatttttgttttagtc
TTCTTATTAATAtttgctttttgaaaattttagcttcaaatTGCAAAAGT
CCGAGATCTaggtttcattttcaataatcgACTGTGGCGACAAACTAAAG
CGTCGTAGGTAAACCAGTAAATGGTTGCTGACATTCTAATAAAACCATAT
TGCAATATTTTCAGCCACCGAACAAGTTTGAAACATACACATTATTCGAT
ACGAATTCACCGACATTGATGGACGCCATCAAAACTTTATTATGGATGCT
GTTTACCGCTGTCGTTCTTGGTTTCATTTTTTCCGCGTAtcgatttcata
aaaaacgaacCCAGATTATTGACATCGATAATACTGTTGACACTTGTAAG
TTTTCCCCAGTTTGGGAACGGCTTTTGTTGTTCGCtcatttcgttttttt
ctcaacgttcgttcgttcgttcactCTTTCTGCTTGTTCTTaacatagtc
attataaaaaaccccgttctggcaatgtattgttttagctttttgttcaa
ttttcttttgttacaaacaaaagacaagttgcgatttgcatactttttta
tcacgttaccaaaatctcctcttgggattggtctagtTTCTAATCACATA
TGATCAagaagtttgcaaaataaatggattttggtacgtaagctccatct
tttaacaataaaaagagataaaagccttccagaccagtgattttataatg
actatgttCTTAGTTCGTTCTTCCTTGCTTCGCTTCCTTAACTTTTTcat
tcgtttgttcgttcgctCGTTCCTCCTCCATTTCTTCCCTGATCCTTTCA
TCTCTTCTTCCTTTCCTCGCCCCTTTCACTTATCCCTTCCTTCGACTATT
CCTTTATCTCCTTgttcgtttgtttgtttgtttttttgtttgtttgtttg
tttgtttgtttgtttgtttgtttgtttgtttgtttgtttgtttgttcttt
CTAACATCCATTGTTTTTCGTTCCTCTTTTTACTTTAAtgccgggggggg
gtacttaggttAAATGGGTGCTGGATATGTGCAAGCCacaagggtccctt
tttcacacccttgaaagtctctcaaagaggtacaaaaaccattaaaaagg
aAATTGAGTCTATGTAAGTgtccaaaaatcacgaaattcaaaatttccaa
aataatcgataaaaatgttgagaaagtctctctaagggtcccaaaaacgc
taatttttcatctttctaagtgtcgattttcgattttttgctcGGACGTa
tccgtcacctcgcaaacctagtacccccgggcttTAATGTGTTCCTTGCT
TTAATTGTCAGCCAGTGTAGTTGCCTTTAGATTTTATTAGGATATTCGTA
GATTGTGATATTTCAATTCACGATTAAACTtatcgtttgttcactgtttt
TTCTTCGTTCggttgtttgtttatttttcgtttCGGTGAAAAGAGTTTTG
GAAGACGTAAATCAAGCTTAAGAAATTGTATTTACGTATGTAGGATCAAT
ATAGAGTGTTCATGTATCCGTCTCATAAGCAAATGACTTCcgaacaaaat
tttaaatttcagctCTATCTATTCGTCCCATATGGAGAGAAGTCATCAAA
TTGCATTATCTGTTTTGTCATCGAGTgtataatttacagaccagaatgga
TCAAGAAAGAATCAAATTATATCGAGACAAAGGAGCAAGTTCTTTGAGAA
ACAATAACCGATTTCATTTATATTCTCGGCAGAAATATTCTACAGTTGGC
AATGAGGGCTCAGATACAAAAATTGCTCAAGCTTTTCGAAAACTATCTCG
ACTTTCAATCACAAGCAACTCATCTACGAAAAGCTATAATCGACACTACG
ATGATTTGGAACGAGGAGAGTGTTCCCATAGTAACAACAATAATGACGTG
TCGGAAAAAACTTTTCGTAAGATTTCGATCTCCAAAAGAAAGAGACGTGG
TAAAGAGAGCATTGCTGGATTTTCAAGACTTCATGATTTAGAAGAAGAAC
AAGAGAGAACACAAAGTGATTTTTCAATGCGTTCTCCCAGCCTCGCTTCC
ATGCGGAGCTACAATGAACGTATCAAAGATCTTGATTCCGATTTGGATTT
GTATAATCAGGGATACGACGAATCCGATATTGAAAGTGacttatcgggaa
atcgggattCGAGTGATGAGGGTGAGAACAGAGAAACCGATTCGGATTCC
TCTGACAGTAATTGAAATATTGATCATTCACATGAGGCTGGGAAGCTCAA
TACTTTAATGGTATAACATTTCGCTGATATTGAATTTCACagaagtccca
atggaaatttggaaatgCCTTATTCGCAGAATATTTCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034752XLOC_034752Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00055169-exon-scaffold_251-1491911889:448761..448812TCONS_00055169-exon-scaffold_251-1491911889:448761..448812Clytia hemisphaericaexon
TCONS_00055169-exon-scaffold_251-1510915933:448761..448812TCONS_00055169-exon-scaffold_251-1510915933:448761..448812Clytia hemisphaericaexon
TCONS_00055169-exon-scaffold_251-1575043694:448761..448812TCONS_00055169-exon-scaffold_251-1575043694:448761..448812Clytia hemisphaericaexon
TCONS_00055169-exon-scaffold_251-1491911889:449148..449429TCONS_00055169-exon-scaffold_251-1491911889:449148..449429Clytia hemisphaericaexon
TCONS_00055169-exon-scaffold_251-1510915933:449148..449429TCONS_00055169-exon-scaffold_251-1510915933:449148..449429Clytia hemisphaericaexon
TCONS_00055169-exon-scaffold_251-1575043694:449148..449429TCONS_00055169-exon-scaffold_251-1575043694:449148..449429Clytia hemisphaericaexon
TCONS_00055169-exon-scaffold_251-1491911889:453900..454196TCONS_00055169-exon-scaffold_251-1491911889:453900..454196Clytia hemisphaericaexon
TCONS_00055169-exon-scaffold_251-1510915933:453900..454196TCONS_00055169-exon-scaffold_251-1510915933:453900..454196Clytia hemisphaericaexon
TCONS_00055169-exon-scaffold_251-1575043694:453900..454196TCONS_00055169-exon-scaffold_251-1575043694:453900..454196Clytia hemisphaericaexon
TCONS_00055169-exon-scaffold_251-1491911889:454345..454930TCONS_00055169-exon-scaffold_251-1491911889:454345..454930Clytia hemisphaericaexon
TCONS_00055169-exon-scaffold_251-1510915933:454345..454930TCONS_00055169-exon-scaffold_251-1510915933:454345..454930Clytia hemisphaericaexon
TCONS_00055169-exon-scaffold_251-1575043694:454345..454930TCONS_00055169-exon-scaffold_251-1575043694:454345..454930Clytia hemisphaericaexon
TCONS_00055169-exon-scaffold_251-1491911889:455234..455387TCONS_00055169-exon-scaffold_251-1491911889:455234..455387Clytia hemisphaericaexon
TCONS_00055169-exon-scaffold_251-1510915933:455234..455387TCONS_00055169-exon-scaffold_251-1510915933:455234..455387Clytia hemisphaericaexon
TCONS_00055169-exon-scaffold_251-1575043694:455234..455387TCONS_00055169-exon-scaffold_251-1575043694:455234..455387Clytia hemisphaericaexon
TCONS_00055169-exon-scaffold_251-1491911889:455564..455630TCONS_00055169-exon-scaffold_251-1491911889:455564..455630Clytia hemisphaericaexon
TCONS_00055169-exon-scaffold_251-1510915933:455564..455630TCONS_00055169-exon-scaffold_251-1510915933:455564..455630Clytia hemisphaericaexon
TCONS_00055169-exon-scaffold_251-1575043694:455564..455630TCONS_00055169-exon-scaffold_251-1575043694:455564..455630Clytia hemisphaericaexon
TCONS_00055169-exon-scaffold_251-1491911889:456179..456507TCONS_00055169-exon-scaffold_251-1491911889:456179..456507Clytia hemisphaericaexon
TCONS_00055169-exon-scaffold_251-1510915933:456179..456507TCONS_00055169-exon-scaffold_251-1510915933:456179..456507Clytia hemisphaericaexon
TCONS_00055169-exon-scaffold_251-1575043694:456179..456507TCONS_00055169-exon-scaffold_251-1575043694:456179..456507Clytia hemisphaericaexon
TCONS_00055169-exon-scaffold_251-1491911889:457075..457255TCONS_00055169-exon-scaffold_251-1491911889:457075..457255Clytia hemisphaericaexon
TCONS_00055169-exon-scaffold_251-1510915933:457075..457255TCONS_00055169-exon-scaffold_251-1510915933:457075..457255Clytia hemisphaericaexon
TCONS_00055169-exon-scaffold_251-1575043694:457075..457255TCONS_00055169-exon-scaffold_251-1575043694:457075..457255Clytia hemisphaericaexon
TCONS_00055169-exon-scaffold_251-1491911889:458473..459248TCONS_00055169-exon-scaffold_251-1491911889:458473..459248Clytia hemisphaericaexon
TCONS_00055169-exon-scaffold_251-1510915933:458473..459248TCONS_00055169-exon-scaffold_251-1510915933:458473..459248Clytia hemisphaericaexon
TCONS_00055169-exon-scaffold_251-1575043694:458473..459248TCONS_00055169-exon-scaffold_251-1575043694:458473..459248Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_251supercontigscaffold_251:448761..459248 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.165726	0.169031	0	0	0	0	0	0	0.04238	0.0318308	0.22275	0	0	0	0.487654	7.66989e-06	0.146386	0	0	0	0	0	0.468623	0	0	0	0	0.126396	0.418832	0.196369
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00055169 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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