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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00055190 ID=TCONS_00055190|Name=TCONS_00055190|organism=Clytia hemisphaerica|type=transcript|length=1293bp
CTACTCCTTTAAAGGTTATCAGCAACAAGGAATTAAATTTAAAGAACTCT
AATTATTCTAAtacaaaaacttatttttagagAGTAATCTTTGATAATAG
ACAATGTCAAGTATTTTGAAGCGAGGTGAAAGCAAAACTCCAAATGAAAA
ACGaataccaaaaaagaaaaagaaagaaattaactATGTAcattgttttg
gaaatgaagaaaaagaatttttagatGCTTTGACGCTGGGTACATCAATT
ATGGAGCTCTTGAATCATTTATTATACGCCAGAAGTCAGGTCCCAATGCC
TCTTGTTATGCTGTCCCAGATGATGGATAGGAAAAAGCAAACTGTTAACA
AGAATCCTCTAATTGCAACAAAAGCTACTAAAAAGGAAACATCAGTTCAC
AATTTATCTTTAATCACAAAATCAATTCGTAAGCTTTTTTCATTGCACCC
TGTACGTAAAATAGCTTTGATTTTAGGCTCAACAACAATAAGCCCGAAAG
AGACTTTCGTTATAAGACTTGATAGTGACCTAACtgatatttgtcaaaat
aaacaCTCTATGGATAGACCAAATGGATCAATAGTACGTAGATTCTTACG
AGGTTTTGTTACCAATGAAGCTTTAAATGATTTACAGTCAATCAGACCGC
AGAGCATACACATACTTTTTAGTTTGGATGATTTCTATGAACTTGACGAA
GACCTTAGTAGTATATTTATCCCTAAAGCGAATTATAGAGTACCCTCGCG
TGGCGTTATTCACCATATCGATGTATGTTTGAATGAATTAGGGGCGGAAG
ATAACTTTCTTGATGAGCTCTCCTTAGACTCAGGTCATTGGTATGCTGCT
AATTTAACAGCCAAGGGATTCAGAGAAAGATAATTACttttcatttgata
ttttttttttagggAAATACCTTGGGGTACGTTTATACGGTgtcatttgt
ttttgtttttgtcccTTTAGAGGGACTATTTCCAAACATCagctaaattt
ttaaaatctttctcaAAATGTTTGAATCATTCAAACTCTAGCgagttttt
aaacatttttgaaactcATACTTAATGTATAGCTCTactattaaattttg
agatatacatctgttgcatatctgttatatatttttaaaatagtTATATT
AGGTGTGccaagaaatttttaaaaatatgtaaaattttcgaattttttag
atattttcaaACTTATCATTCtcttttaatagcttttttttttattttat
ttgagatttttcatttgggacttgatgttttttttaatgttta Run BLAST on NCBI transcript from alignment at scaffold_251:679885..681177+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00055190 ID=TCONS_00055190|Name=TCONS_00055190|organism=Clytia hemisphaerica|type=transcript|length=1293bp|location=Sequence derived from alignment at scaffold_251:679885..681177+ (Clytia hemisphaerica)
CTACTCCTTTAAAGGTTATCAGCAACAAGGAATTAAATTTAAAGAACTCT
AATTATTCTAAtacaaaaacttatttttagagAGTAATCTTTGATAATAG
ACAATGTCAAGTATTTTGAAGCGAGGTGAAAGCAAAACTCCAAATGAAAA
ACGaataccaaaaaagaaaaagaaagaaattaactATGTAcattgttttg
gaaatgaagaaaaagaatttttagatGCTTTGACGCTGGGTACATCAATT
ATGGAGCTCTTGAATCATTTATTATACGCCAGAAGTCAGGTCCCAATGCC
TCTTGTTATGCTGTCCCAGATGATGGATAGGAAAAAGCAAACTGTTAACA
AGAATCCTCTAATTGCAACAAAAGCTACTAAAAAGGAAACATCAGTTCAC
AATTTATCTTTAATCACAAAATCAATTCGTAAGCTTTTTTCATTGCACCC
TGTACGTAAAATAGCTTTGATTTTAGGCTCAACAACAATAAGCCCGAAAG
AGACTTTCGTTATAAGACTTGATAGTGACCTAACtgatatttgtcaaaat
aaacaCTCTATGGATAGACCAAATGGATCAATAGTACGTAGATTCTTACG
AGGTTTTGTTACCAATGAAGCTTTAAATGATTTACAGTCAATCAGACCGC
AGAGCATACACATACTTTTTAGTTTGGATGATTTCTATGAACTTGACGAA
GACCTTAGTAGTATATTTATCCCTAAAGCGAATTATAGAGTACCCTCGCG
TGGCGTTATTCACCATATCGATGTATGTTTGAATGAATTAGGGGCGGAAG
ATAACTTTCTTGATGAGCTCTCCTTAGACTCAGGTCATTGGTATGCTGCT
AATTTAACAGCCAAGGGATTCAGAGAAAGATAATTACttttcatttgata
ttttttttttagggAAATACCTTGGGGTACGTTTATACGGTgtcatttgt
ttttgtttttgtcccTTTAGAGGGACTATTTCCAAACATCagctaaattt
ttaaaatctttctcaAAATGTTTGAATCATTCAAACTCTAGCgagttttt
aaacatttttgaaactcATACTTAATGTATAGCTCTactattaaattttg
agatatacatctgttgcatatctgttatatatttttaaaatagtTATATT
AGGTGTGccaagaaatttttaaaaatatgtaaaattttcgaattttttag
atattttcaaACTTATCATTCtcttttaatagcttttttttttattttat
ttgagatttttcatttgggacttgatgttttttttaatgttta
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00055190-exon-scaffold_251-1491911889:679885..681177 | TCONS_00055190-exon-scaffold_251-1491911889:679885..681177 | Clytia hemisphaerica | exon |
| TCONS_00055190-exon-scaffold_251-1510915933:679885..681177 | TCONS_00055190-exon-scaffold_251-1510915933:679885..681177 | Clytia hemisphaerica | exon |
| TCONS_00055190-exon-scaffold_251-1575043694:679885..681177 | TCONS_00055190-exon-scaffold_251-1575043694:679885..681177 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_251 | supercontig | scaffold_251:679885..681177 + |
Blast
The following BLAST results are available for this feature:
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