TCONS_00055222 (transcript) - C. hemisphaerica

Overview
NameTCONS_00055222
Unique NameTCONS_00055222
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length364

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00055222 ID=TCONS_00055222|Name=TCONS_00055222|organism=Clytia hemisphaerica|type=transcript|length=364bp
CTATTGGATTGGTTTGACCCAAGAGAATGGAGCATACAAATGGTTGACGG
GAGAAGCTTTGACTTATGGTCAACCGTCCACGGGAGATTGTTTTTACGTA
ACGCACGGTTCCACTACTTGGTTCAAATCATCATCGTGTGATTATGAAAA
ACATATTGTATGTAAAATATTTGATAACACATTTCCAAATTCAAATGGTA
CAGGCAAATATCATCTCATTCAAGCTGACCGTAAAAGACAATCGTTTGCT
AATGAAGATTGCGAAACTAAGAAAGGAAAGCTTGCAACTTTTAAAACAGA
ATCAGAGTGGGATGCATTTTTCGGACAAATTCCCGCAAGaTACGCTGGAG
ATTCGTTTTGGATT
Run BLAST on NCBI

protein sequence of TCONS_00055222-protein

>TCONS_00055222-protein ID=TCONS_00055222-protein|Name=TCONS_00055222-protein|organism=Clytia hemisphaerica|type=polypeptide|length=121bp
YWIGLTQENGAYKWLTGEALTYGQPSTGDCFYVTHGSTTWFKSSSCDYEK
HIVCKIFDNTFPNSNGTGKYHLIQADRKRQSFANEDCETKKGKLATFKTE
SEWDAFFGQIPARYAGDSFWI
Run BLAST on NCBI

transcript from alignment at scaffold_251:297973..305822-

Legend: exonfive_prime_UTRCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00055222 ID=TCONS_00055222|Name=TCONS_00055222|organism=Clytia hemisphaerica|type=transcript|length=7850bp|location=Sequence derived from alignment at scaffold_251:297973..305822- (Clytia hemisphaerica)
CTATTGGATTGGTTTGACCCAAGAGAATGGAGGTAATTCCTAGTAGCGGT
TTCCTAACACTGATAATCGGTCATTCCCAAGCCTTAACATGCGAAACAGA
ATAACGCGACACCGTTGTTAAAAGTAAACCGATTTCGCAAACCAAAAGCT
TTGGTCGGAGTTTTTTGTCATTTGTACTCTAATGGTATCACTATGAATGT
TATAGAAAGTTTTTCTTTCGACCCAAGCCTTTCAATATTCCCAAATATAT
CGACAGACCAGAGTGGAGGGGCGATCTGGCACCATACAAGTTTAACCAAT
TCTACTTTCGAGGCGATACTAACTGTAAATACATAATAGTCGTCTGAGTC
GCAGAATAAATATATATACTTCCTATATATACTTCTATAAGAAAGTTTTT
CGCTAGAGGATGAGCAGAAGCCTATAGAAGTAGTGTCTTCTTAAAGTTTT
CTATTCCATTCACAGCATACAAATGGTTGACGGGAGAAGCTTTGACTTAT
GGTCAACCGTCCACGGGAGATTGTTTTTACGTAACGCACGGTTCCACTAC
TTGGTTCAAATCATCATCGTGTGATTATGAAAAACATATTGTATGTAAAA
TATTTGGTGAGTAAATGTTTGTTGTTACGCGTCCTACCTTAAGGGAAGAA
AATTTCGCGGGGACAAATTTTCCCGGAACAAATTTTCGCGGAATTTAATG
TTGCGGTTTTTTAATAAATCCGTGAAACACAAATATTTTCAGAAGTTAAA
AAATTACCTCTAAAATCGGTCTTTTTATGAAGAAAAAAATTCTCTCAATC
GCGAAATTAAGTTCCGCAAAAATTCCTTCCCGCAAAAATTTCTTCCCTTA
ATGTATTCCTCGTTAAAGGGCCGGAAGTCGACAAGGATTTCCGTCCCATA
ATGATCCCTTTACACTCTCAGTAACTACTGCCGAGCTAAATTTTCTCCAT
TTATTATTTTTTATTTTTTTTATTAATTGTCTTTCAGGCTCTTCCATNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNTAAAATATCAAGTAAATATTGTAAGG
TAAATATTAATAATATAACCACTAGACCTCATGATCATAGAATCTACAAT
ATATTGGCTTGAAATAGGAAAAATTTTAAAAGTGAGTGAGGTGCCAAGAA
AAAAAAAACAAACAAAAAAAACAAAAAAAAAACGGACATGACCCGAAAAA
CGTTGCTAAGACTTGAACATGATGAGAAATTGTAGAGTTGAATACTGCTA
ACTCGAACGAAGAAAACTATAAGATTAAGTAATGTATAGATNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNA
AACACGGCATCATGATCACTGATTTCTGGCGTCGGTAGAACTTCGCAGAA
TTTGACTTTGCATGACGAGTTGGTCGAAATGTGGTCAATGAGCGACACTC
CATTACGTGATGGAGATTTGACATGCTGGGTGAGGTCGAACGAACGAAGG
GTTTCGAGATACGAATCTTTTATTTGAGAGTTTGATAATAGATCGATATT
AAAATCACCCGTTATTACCACGTTTCCCGTCCAGTCAAGAATAGCTGTTC
CAACGATTCTGTCGAAGCTTTTAAGCCAATCCGCTTTTCCTTGGTTTGTG
AAGTTCGGTTGATACGCAACATTGAGGAGTAGTTTAGAATGTTTGTTTTT
TCCTTCAATTTCAACCCATAGATGTTCGAGGGCTGGGTTGATGTTGGTGA
TATCTTTGCGTATTTTGTGCTTGATGTCATCTTTGATGTATNNNNNCCAG
GTTTCGGTGAGTGTTACCGCATCGAATTTGTATTTATTAACAAAGAGCAC
AAATTCATCGAACGTGGATACCATGGACTGTGTATTGATGTGAGCGATGC
TAAACAAATGTCTATTTTCATTGAGTTTTTCGAATTATGAACAATTCTTT
AGGGTCCCGGTAATTTTGATTGAGGAACTAATTCAAAAAAGATAGATCTT
GAAAAAAACTTTCCAACGAACCCAAACAAAACCTATTTTGCCAAAGCTGA
CAAAACTGCACTTGAAGTTCACGTACCATAGGTTTGAAATTTCACAGCAC
TGAAGGAGTTAAATGAGGAAAATTCAAAAATAATTTCTGATTTAGACTGC
TGGCATCCATTCTTTAACCTTTAAGGAATTCTTGCTCCTTATACAACTTT
GATACATTGCGCTCAGGCTCACCAATGCAATTATGTTTTCTTTGAAAGTG
ATGTTGTAATAGCACACCGCTATGCAAAGGCGAAAACAAAAAATGTAGTG
TTTCCAGAAACCGGCCAGGTGAAAAAGAAAGTTTTTCTAACCCGGCTGCA
GACTATATGGGTTCGTCTATATGGTTCATCATAAAGAATATCAAGTTCAC
CGTTCAAGCTATCAAACGTCGTTTGAGGATATTTCCGCTTGTAAACCAAG
TTTTGTTGGTTAGTAGTTGATACATTAGTATTCTTGGCTTACTTGATACT
GTTTACGTACATTAAAGTTATCTTTAATAAAGTTATTTCAATGATCTCAA
TTTATCAAAAATAACAACAACAAAAAATTTTCCGGCCGGCCGCATAAGAG
CTTTTTTTCCTTCACCCGCATTCCGGAAACACTACATTTTTTTATTTTCG
CCAAACGTCCTAATTATTACTTTTAACATTTAACAGACGTTCAATCCCAA
AATCCTTTTCATCTTGATTCGTAAGGCGTGCAAGTTATTACTTTTGTATT
GTCAATAAGTGTAATTCAGAAGCAGCCACCGACGAAAAATTTGTAAATAC
CTGTTCTTATTTGCCAGCTGGAAGGATTTTGTTAATTTTTAGAACAGATA
TCCCAATTTCCAGGGTACCAATTTTCTACTCAGAACAGATTAAATAATTA
CTATTCGTTACGTCCCAGAACAGATAACCTTCACTTGATAAAAACAAACA
AAAACTTTGCCAACCAAAAGCTGTCAATATCTAGCCTCAGTAGCAGCGAC
GATGAGCTGCCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCTTTTTT
AATTGTAAAGTAGCGTTGACTTTTATTAGCCTTTGTTGCTACCTTTTCGT
CAACATGAAATAAACTATTACTTACTTACTTACTTACTTACTAGAACAGA
TTGTGTTTATCGAGCCAAGCAAAGCTAAAGCCATTAGAACAGATACTATT
TTCTGAGAAAGGAATAGAACAGATCATAAAAATTAGTTTTTCTTGAAAAT
ATCTTGCTCTAACTTGCCAGCTGGAAATAATTTCAATGTAGAACAGATCC
CTAATTTACAGCTGGAAACCTTTAGAACAGCTCAGAAAGGAGCGAGTGCT
TACGATGCGGAATTTATTAGAACAGATAACGAATTTACAGCTGGAAAACA
TTTTGAATTTGAACAGATCAAATCGATGACCAAAGCGGGTAGCGGGGGCA
AGGTTTAAAACAGATAGTATTTTCCTAGCTGAACCAAAATTGGGAAGCAT
ATATTTTAGGGAAAAGATCGGCCATAATTTTTGCTTAGAACTAGAACTGA
TCGAAAATTTCCAGGTGGTAGATTTTTATGCAAGAACAGATCAATAATTT
CTAGGTAGACAATAATTTCCTGTTTTCCTTAGAACAGATCGCTATTTTCA
GCTGGAACATACCTTTAGAACAGATATTTTGAAGAAACCCCTCGGTGGCT
GCTTTCGGTAATTGACTTGAAAAAGCAATTAATGCAAAGGATGATTGGAT
TAAAACTCAGACAAACAGTAATTTTGATGTCTATTAAAATCACTGCGGTA
TGATATTCAAATGTTTCCATTATCTTCTTGAATACAGATAACACATTTCC
AAATTCAAATGGTACAGGCAAATATCATCTCATTCAAGCTGACCGTAAAA
GACAATCGTTTGCTAATGAAGATTGCGAAACTAAGAAAGGAAAGCTTGCA
ACTTTTAAAACAGAATCAGAGTGGGATGCATTTTTCGGACAAATTCCCGC
AAGGTAAATTTTTCGGACAAATTCCCGCAAAGTAAAATTTTTCGGACAAA
TTCCCGCAAAGTAAAATTTTTTGAACAAATTCCCACAAGGTAAAATTTTT
CGGACAAATTCCCGCAAAGTAAAATTTTTCGGACAGATTCCTGCAAAGTA
AAATTTTTCGGACAAATTCCCCGCAATGTAAAATTTTTCGAACAAATTCC
CGCAAGGTAAAAATTTTTGGACAAATTCCCTCAAGGTAAAAATTTTCGGA
CAAATTCCCGCAAGGTAAAATTTTTCGGACAAATTCCCGCAAGGTAAAAA
TGTTCGGGCGAATTCCAGCAAGGTAAAATTTTTCGCACAAATTCCCGCAA
GGTAAAAAATTTTCGAACAAATTCCAGCAAGGTAAATTTTTTTGGATAAA
TTCCCCCAAGGTAAAATTTTTCAGACAAATTCCCGCAAAGTAAAATTTTT
CGGACAAATTCCCGCAATGTAAAATTTTTCGGAAAAATTCCCGCAAGGTA
AAAAATTTTCGGGCAAATTCCAGCAAGGTAAATTTTTTTGGACAAATTCC
CCCAAGGTAAAATTTTTCAGACAAATTCCCGCAAAGTAAAATTTTTCGGA
CAAATTCCCGCAGGGTAAAAACTCATTGTATCTTTTGTTTTATTTTCATG
TATTAAATTATTCTAGACCTTAGCTCTCAATAGATCTTATTGGAGTTTTT
GATTTTTCTAAAGAAGCGATGCATTGTGGGATTATTTCGGGAGTATTACA
ATATAAAATTCCCTCGAGGAATTCCTAAAAGATTTCTATTGTAATACTCC
AGAAACAATCCCACAATGCATCGCTTTTTTAGAAAAATCAAAAACTCCGA
TAAGATCTATTGCTTCAGATTTTTTGATTCGTGTTCTACTGCTACTATTT
TACGTACTTGTATTGTTTCGAGGAGTTTACCCTTGAATAAAATTATTAGA
GCTGCATGATTTATTGGCTTAGCGCAGAAAAATTAGCTTTTGAAGAGCAA
ATAGTTGGAAAAATTTTTACGTTGTCAAGTTCTCAGATTTTCTTGTTTTT
CAATTCACTTTAAATCTTTTTTTAGATACGCTGGAGATTCGTTTTGGATT

Coding sequence (CDS) from alignment at scaffold_251:297973..305822-

>TCONS_00055222 ID=TCONS_00055222|Name=TCONS_00055222|organism=Clytia hemisphaerica|type=CDS|length=1452bp|location=Sequence derived from alignment at scaffold_251:297973..305822- (Clytia hemisphaerica)
ATACGCTGGAGATTCGTTTTGGATTATAACACATTTCCAAATTCAAATGG
TACAGGCAAATATCATCTCATTCAAGCTGACCGTAAAAGACAATCGTTTG
CTAATGAAGATTGCGAAACTAAGAAAGGAAAGCTTGCAACTTTTAAAACA
GAATCAGAGTGGGATGCATTTTTCGGACAAATTCCCGCAAGCATACAAAT
GGTTGACGGGAGAAGCTTTGACTTATGGTCAACCGTCCACGGGAGATTGT
TTTTACGTAACGCACGGTTCCACTACTTGGTTCAAATCATCATCGTGTGA
TTATGAAAAACATATTGTATGTAAAATATTTGTATTGGATTGGTTTGACC
CAAGAGAATGGAGATACGCTGGAGATTCGTTTTGGATTATAACACATTTC
CAAATTCAAATGGTACAGGCAAATATCATCTCATTCAAGCTGACCGTAAA
AGACAATCGTTTGCTAATGAAGATTGCGAAACTAAGAAAGGAAAGCTTGC
AACTTTTAAAACAGAATCAGAGTGGGATGCATTTTTCGGACAAATTCCCG
CAAGCATACAAATGGTTGACGGGAGAAGCTTTGACTTATGGTCAACCGTC
CACGGGAGATTGTTTTTACGTAACGCACGGTTCCACTACTTGGTTCAAAT
CATCATCGTGTGATTATGAAAAACATATTGTATGTAAAATATTTGTATTG
GATTGGTTTGACCCAAGAGAATGGAGATACGCTGGAGATTCGTTTTGGAT
TATAACACATTTCCAAATTCAAATGGTACAGGCAAATATCATCTCATTCA
AGCTGACCGTAAAAGACAATCGTTTGCTAATGAAGATTGCGAAACTAAGA
AAGGAAAGCTTGCAACTTTTAAAACAGAATCAGAGTGGGATGCATTTTTC
GGACAAATTCCCGCAAGCATACAAATGGTTGACGGGAGAAGCTTTGACTT
ATGGTCAACCGTCCACGGGAGATTGTTTTTACGTAACGCACGGTTCCACT
ACTTGGTTCAAATCATCATCGTGTGATTATGAAAAACATATTGTATGTAA
AATATTTGTATTGGATTGGTTTGACCCAAGAGAATGGAGATACGCTGGAG
ATTCGTTTTGGATTATAACACATTTCCAAATTCAAATGGTACAGGCAAAT
ATCATCTCATTCAAGCTGACCGTAAAAGACAATCGTTTGCTAATGAAGAT
TGCGAAACTAAGAAAGGAAAGCTTGCAACTTTTAAAACAGAATCAGAGTG
GGATGCATTTTTCGGACAAATTCCCGCAAGCATACAAATGGTTGACGGGA
GAAGCTTTGACTTATGGTCAACCGTCCACGGGAGATTGTTTTTACGTAAC
GCACGGTTCCACTACTTGGTTCAAATCATCATCGTGTGATTATGAAAAAC
ATATTGTATGTAAAATATTTGTATTGGATTGGTTTGACCCAAGAGAATGG
AG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_034778XLOC_034778Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00055222-exon-scaffold_251-1575043694:305791..305822TCONS_00055222-exon-scaffold_251-1575043694:305791..305822Clytia hemisphaericaexon
TCONS_00055222-exon-scaffold_251-1575043694:305217..305357TCONS_00055222-exon-scaffold_251-1575043694:305217..305357Clytia hemisphaericaexon
TCONS_00055222-exon-scaffold_251-1575043694:299070..299235TCONS_00055222-exon-scaffold_251-1575043694:299070..299235Clytia hemisphaericaexon
TCONS_00055222-exon-scaffold_251-1575043694:297973..297997TCONS_00055222-exon-scaffold_251-1575043694:297973..297997Clytia hemisphaericaexon
TCONS_00055222-exon-scaffold_251-1510915933:305791..305822TCONS_00055222-exon-scaffold_251-1510915933:305791..305822Clytia hemisphaericaexon
TCONS_00055222-exon-scaffold_251-1510915933:305217..305357TCONS_00055222-exon-scaffold_251-1510915933:305217..305357Clytia hemisphaericaexon
TCONS_00055222-exon-scaffold_251-1510915933:299070..299235TCONS_00055222-exon-scaffold_251-1510915933:299070..299235Clytia hemisphaericaexon
TCONS_00055222-exon-scaffold_251-1510915933:297973..297997TCONS_00055222-exon-scaffold_251-1510915933:297973..297997Clytia hemisphaericaexon
TCONS_00055222-exon-scaffold_251-1491911889:305791..305822TCONS_00055222-exon-scaffold_251-1491911889:305791..305822Clytia hemisphaericaexon
TCONS_00055222-exon-scaffold_251-1491911889:305217..305357TCONS_00055222-exon-scaffold_251-1491911889:305217..305357Clytia hemisphaericaexon
TCONS_00055222-exon-scaffold_251-1491911889:299070..299235TCONS_00055222-exon-scaffold_251-1491911889:299070..299235Clytia hemisphaericaexon
TCONS_00055222-exon-scaffold_251-1491911889:297973..297997TCONS_00055222-exon-scaffold_251-1491911889:297973..297997Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00055222-proteinTCONS_00055222-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_251supercontigscaffold_251:297973..305822 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.228889	0	0	0	0	0.243914	0.294272	0	0	0.477826	0.231895	0	0.91336	2.8456	0.909794	0.418435	1.89008	0.704464	3.16308	4.32837	0.88521	0.971493	0.262439	0.477191	0.245748	1.53527	0.313852	0	0	0
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001304C-type_lectin-like
IPR016186C-type_lectin-like/link
IPR016187CTDL_fold
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00055222 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top