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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00055345 ID=TCONS_00055345|Name=TCONS_00055345|organism=Clytia hemisphaerica|type=transcript|length=1118bp
caagtcaaattagaaccttaccgtctctgCCACAGAAAAACACACTTCTT
GGAACGAAGACGACAAATAATTTAATGACCATTCTACTTGAATAACATAG
TAATTAAATTACTTTACTTAACGACTTTacagtttgaaaataattgacTT
TTATTGCTACCACAAAAAGTCATCATAAAAATAAACGATCCAAGACACGA
GAAAAGCAGCAAAGAGCAGAGATAGTTTGCTCTTGAGAAAAGCAAGAAAA
CTCTTATTGATATGTTGCCACCACAAAACAATACATACTGGAAATGGCAA
AAGATGACTACAACCTTGCAATTAACATGGATGGTAATAGCCACAGTGGC
TGGTGGATTGTATGTTAGTGACATCTATTCTTATGAAGGGagagaaaaac
ttcaaaaagtttcgATGTATCAAGTCAAAAGCAGATCATTCTTCCCAGTA
TGGACAAGCTGGACACTATTGTTCAATGTCTTGTTAGGACTTACTGGAAT
TTATACTAGGAAGGAAGGGTTCATTAGTAACAAAATGTGGTTTGATTTGT
TGAACATTTTTTTCAGACTGGCAATGATTCTTCTATTGGGTTTTGTCTTC
GTAACGTCATATGGTTTTTGTGTGCGGAATGGACCAAGAGGTCTTTCATA
CGAGGGTTCGCGGTGCAAAGATGATGAAGTGTTTTGCATACCGTGCTACA
CAGACACGATTGATCGCATCAGGTTTGAGTATGGTTTGCTTATAGTGATA
TTGGTGATGGAGATTCTATCTTTGTTTACACTGATTGCATGTACCAGTCT
CGATGGCATAAGATGTATTGAAAATGATGTAACAAAACAAACACAAGATC
AAATTTCATCCGAAATTAAGAAAGATCATTGTGCGTAAAAGCTTCCCAAC
CGTTGAAAAGAATGTGGAATAATAAAGGATTATGAATAAATAAGCCTCCA
TCATTTCGACTTTTTGCTACCAAGACCTTCCAACCATTGTGAAGAACGAG
AAACAATTATACATAACATCGCGCCGAATGGGGTTTcctaattttgacgt
tcgaatcataaacgtcaaaaagacgggggtaaaacgTTCGAAATCACGTC
AGAAATGGCGCGCGGGTC Run BLAST on NCBI transcript from alignment at scaffold_253:515412..516529+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00055345 ID=TCONS_00055345|Name=TCONS_00055345|organism=Clytia hemisphaerica|type=transcript|length=1118bp|location=Sequence derived from alignment at scaffold_253:515412..516529+ (Clytia hemisphaerica)
caagtcaaattagaaccttaccgtctctgCCACAGAAAAACACACTTCTT
GGAACGAAGACGACAAATAATTTAATGACCATTCTACTTGAATAACATAG
TAATTAAATTACTTTACTTAACGACTTTacagtttgaaaataattgacTT
TTATTGCTACCACAAAAAGTCATCATAAAAATAAACGATCCAAGACACGA
GAAAAGCAGCAAAGAGCAGAGATAGTTTGCTCTTGAGAAAAGCAAGAAAA
CTCTTATTGATATGTTGCCACCACAAAACAATACATACTGGAAATGGCAA
AAGATGACTACAACCTTGCAATTAACATGGATGGTAATAGCCACAGTGGC
TGGTGGATTGTATGTTAGTGACATCTATTCTTATGAAGGGagagaaaaac
ttcaaaaagtttcgATGTATCAAGTCAAAAGCAGATCATTCTTCCCAGTA
TGGACAAGCTGGACACTATTGTTCAATGTCTTGTTAGGACTTACTGGAAT
TTATACTAGGAAGGAAGGGTTCATTAGTAACAAAATGTGGTTTGATTTGT
TGAACATTTTTTTCAGACTGGCAATGATTCTTCTATTGGGTTTTGTCTTC
GTAACGTCATATGGTTTTTGTGTGCGGAATGGACCAAGAGGTCTTTCATA
CGAGGGTTCGCGGTGCAAAGATGATGAAGTGTTTTGCATACCGTGCTACA
CAGACACGATTGATCGCATCAGGTTTGAGTATGGTTTGCTTATAGTGATA
TTGGTGATGGAGATTCTATCTTTGTTTACACTGATTGCATGTACCAGTCT
CGATGGCATAAGATGTATTGAAAATGATGTAACAAAACAAACACAAGATC
AAATTTCATCCGAAATTAAGAAAGATCATTGTGCGTAAAAGCTTCCCAAC
CGTTGAAAAGAATGTGGAATAATAAAGGATTATGAATAAATAAGCCTCCA
TCATTTCGACTTTTTGCTACCAAGACCTTCCAACCATTGTGAAGAACGAG
AAACAATTATACATAACATCGCGCCGAATGGGGTTTcctaattttgacgt
tcgaatcataaacgtcaaaaagacgggggtaaaacgTTCGAAATCACGTC
AGAAATGGCGCGCGGGTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00055345-exon-scaffold_253-1491911889:515412..516529 | TCONS_00055345-exon-scaffold_253-1491911889:515412..516529 | Clytia hemisphaerica | exon |
| TCONS_00055345-exon-scaffold_253-1510915933:515412..516529 | TCONS_00055345-exon-scaffold_253-1510915933:515412..516529 | Clytia hemisphaerica | exon |
| TCONS_00055345-exon-scaffold_253-1575043694:515412..516529 | TCONS_00055345-exon-scaffold_253-1575043694:515412..516529 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_253 | supercontig | scaffold_253:515412..516529 + |
Blast
The following BLAST results are available for this feature:
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