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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00055504 ID=TCONS_00055504|Name=TCONS_00055504|organism=Clytia hemisphaerica|type=transcript|length=402bp
NNAACGAGTGGCCAAGTTTATTGGTACAGAGGAATATTCAGATGATCAAA
TAGCAAAACTTGTAGAGCATACATCTGTGGATAAAATGAGAGCCAACCCA
ATGGTCAATGGGACTCGACCAATTGATGCATCAATGAAGAATGAGCAAAA
AGGAAATTTTATCAACACTGGGAAaacaggaggatggaaaaacAAACTCA
CTGAAGAAACTATTGAGAGGTTTAAAAAATGGGAAGAAATATGGTTGAAA
GACACTGGATTGTTGTTTGTTTacgaagtttgatttttttatcacacata
aattttagcaattttacgAAGATcatagtttttatatttttattttttat
agaaattttaaaaagtgcTTTCTATTATAAATTGGGCTTAGATTGGTCTT
Gc Run BLAST on NCBI transcript from alignment at scaffold_253:445946..447256- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00055504 ID=TCONS_00055504|Name=TCONS_00055504|organism=Clytia hemisphaerica|type=transcript|length=1311bp|location=Sequence derived from alignment at scaffold_253:445946..447256- (Clytia hemisphaerica)
NNAACGAGTGGCCAAGTTTATTGGTACAGAGGAATATTCAGATGATCAAA
TAGCAAAACTTGTAGAGCATACATCTGTGGATAAAATGAGAGCCAACCCA
ATGGTCAATGGGACTCGACCAATTGATGTAATTATTTTTAAACCAATCAA
TTTGATAATGAGTCTGAGTAAAAGTTAAATTCTTTATGGATATTTTTAAT
CAATTATGCTTTTACCTTAAAGAAAGAAATTTTGGCGGGAATTTAATTTG
GCGGATGGTCAAAAAAGTTTTTTCAGAGGGAATTTAATTTGGGGATGGAG
GAAAAAACTAAATTTGGCGGGAATTTAATTGGGCGGTTGCTTAAAAATTT
AACCTTAAGATGTCGTCAAAACAGCGAAAAAAATAGCAAAAACACTTTAA
AAGAGATCATATTTTCAAAATGTTTAATTTGGCGGGAATTTAATTTGGCG
GATGGCGGAAAAAAGAAATTTTGGCGGGAACTTGATTTGGCAGATTTCAG
TCAAATCCGCCAAATCCGCCAAATTTTCTTTCCCCGAAAATTTCTTCCTT
TAAGGTAGCTTTTTTGCAATAAGGAGGGGGTATGCTTTTAGGTTTTTTGT
AATCAGGGGGGTGTACAGCTGCAGGGTACATACCCACAGCCAGGTGGACT
GGTGGTGTCTTATTTTGAATTTCATTTATTACCAGGTTCTATATTTGGGG
TGGGTGGGCCATTTCAACTCATTCCAAGCAAGCATCTGGTACTGATTTTG
GTATGTGGTGGGTAAAATGGGTAAAAATGGTAAAAATTTATCTGTTTTGG
CAAATCAGAAAAAAATTCCGTAAAAAATCAGATTTCATTTTAATTTCACG
ATTTTGGTGAGATGAAATTGACTGTTAGGTATTACAAGGTACTTTTCCAG
AGTTATTTAGCCATATTTTCCTTGGTGACCAGCTTCCAAATAGGGGGCGG
AGGTCCTTTTTTCTCCAAAAAAAGTTTGTACCTTAAACTATCTAAGATAT
CTAAAACCGTTCTTTCTTCAATTTTAACAACTAAAGGCATCAATGAAGAA
TGAGCAAAAAGGAAATTTTATCAACACTGGGAAAACAGGAGGATGGAAAA
ACAAACTCACTGAAGAAACTATTGAGAGGTTTAAAAAATGGGAAGAAATA
TGGTTGAAAGACACTGGATTGTTGTTTGTTTACGAAGTTTGATTTTTTTA
TCACACATAAATTTTAGCAATTTTACGAAGATCATAGTTTTTATATTTTT
ATTTTTTATAGAAATTTTAAAAAGTGCTTTCTATTATAAATTGGGCTTAG
ATTGGTCTTGC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00055504-exon-scaffold_253-1575043694:447130..447256 | TCONS_00055504-exon-scaffold_253-1575043694:447130..447256 | Clytia hemisphaerica | exon |
| TCONS_00055504-exon-scaffold_253-1575043694:445946..446220 | TCONS_00055504-exon-scaffold_253-1575043694:445946..446220 | Clytia hemisphaerica | exon |
| TCONS_00055504-exon-scaffold_253-1510915933:447130..447256 | TCONS_00055504-exon-scaffold_253-1510915933:447130..447256 | Clytia hemisphaerica | exon |
| TCONS_00055504-exon-scaffold_253-1510915933:445946..446220 | TCONS_00055504-exon-scaffold_253-1510915933:445946..446220 | Clytia hemisphaerica | exon |
| TCONS_00055504-exon-scaffold_253-1491911889:447130..447256 | TCONS_00055504-exon-scaffold_253-1491911889:447130..447256 | Clytia hemisphaerica | exon |
| TCONS_00055504-exon-scaffold_253-1491911889:445946..446220 | TCONS_00055504-exon-scaffold_253-1491911889:445946..446220 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_253 | supercontig | scaffold_253:445946..447256 - |
Blast
The following BLAST results are available for this feature:
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