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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00055641 ID=TCONS_00055641|Name=TCONS_00055641|organism=Clytia hemisphaerica|type=transcript|length=1111bp
NGTAGAAGGAGTTTTtaggaaatttcaaaacttgaaagatATTGttacct
tttttattttatttaccataattattttttgcaaaaataaatacTGGTTG
ACATTTTATAGTACAAATTATTTGTCcctgaatcttttttttttcatcaa
acatTTATTTTGGTCTTTCTTTCAAAAGCATTGTAAATACTTTGGAAAAA
CTTGTTCATAATAATATTGTTTTTTAGACGTTTTATTTTTTCCCCTTGCG
TTTTCATTTTATAAATGAGACGGTCTTTTTTTAGGGAGAAGCTTTTCAAT
TCTTTACACATACCATTTGGGTTGAGTATCGTTTTTGAAGATAGTCTTTT
TTGCCAGTAAATATAGGCTGCTTTTTGGAATCTTTCAATGTAGGCATGCT
ACTTAATTCTTAAATCATACCAGCGACTTATTTCTTATTCTTGGATTCTG
GCAGGCCTTTCGTTTGTGGATAACGttataattattgatttgttttgaaa
agaaaaaaaaagttatttaaatTACAGAATtataaaatttactttattaA
TGTATGTAAGTAGACGAAATTTTTGTGTCATATTTTTAACTACAGATTTC
GAGAGAAGCCTCCGTCAGGATATACCACCTTTTTCGAGAATCAGGATAGT
TTTCACACACCGAAAGAGGGGGTTCAATTGTCTTCACTTCTTCATCAATT
CATCAATTGTTTTGTGAATCTACTTTCCTGTTGCCCTCCCCTCTCTCAAC
AAAGtcattgaattattttttaaatgccAAAAtcggaagaaattttgttt
gaatttatatatttattattaaTATTCTTATAATAATGAGGTTTAATTAA
GGGTCATTAATGGGTTTGTCCCCTGTATATTTATAACTTCCCTCCACCAT
AGATTTTAGTTCCTGTTCGATTTTTGATACTTctgcaactctttgttttt
ggactttggtgATGACCCAAAGACAAACCTCagcaaattttcttttattg
cTTTTTTCTCATAATGCTATTTGATGatctttttatatattatatttttt
gttttagagtaaaatgaagaaaaaaggaGAGTTTTACCgtaaattgaaat
ttcaatactGA Run BLAST on NCBI transcript from alignment at scaffold_253:1077272..1078382 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00055641 ID=TCONS_00055641|Name=TCONS_00055641|organism=Clytia hemisphaerica|type=transcript|length=1111bp|location=Sequence derived from alignment at scaffold_253:1077272..1078382 (Clytia hemisphaerica)
TCagtattgaaatttcaatttacGGTAAAACTCtccttttttcttcattt
tactctaaaacaaaaaatataatatataaaaagatCATCAAATAGCATTA
TGAGAAAAAAgcaataaaagaaaatttgctGAGGTTTGTCTTTGGGTCAT
caccaaagtccaaaaacaaagagttgcagAAGTATCAAAAATCGAACAGG
AACTAAAATCTATGGTGGAGGGAAGTTATAAATATACAGGGGACAAACCC
ATTAATGACCCTTAATTAAACCTCATTATTATAAGAATAttaataataaa
tatataaattcaaacaaaatttcttccgaTTTTggcatttaaaaaataat
tcaatgaCTTTGTTGAGAGAGGGGAGGGCAACAGGAAAGTAGATTCACAA
AACAATTGATGAATTGATGAAGAAGTGAAGACAATTGAACCCCCTCTTTC
GGTGTGTGAAAACTATCCTGATTCTCGAAAAAGGTGGTATATCCTGACGG
AGGCTTCTCTCGAAATCTGTAGTTAAAAATATGACACAAAAATTTCGTCT
ACTTACATACATtaataaagtaaattttataATTCTGTAatttaaataac
tttttttttcttttcaaaacaaatcaataattataaCGTTATCCACAAAC
GAAAGGCCTGCCAGAATCCAAGAATAAGAAATAAGTCGCTGGTATGATTT
AAGAATTAAGTAGCATGCCTACATTGAAAGATTCCAAAAAGCAGCCTATA
TTTACTGGCAAAAAAGACTATCTTCAAAAACGATACTCAACCCAAATGGT
ATGTGTAAAGAATTGAAAAGCTTCTCCCTAAAAAAAGACCGTCTCATTTA
TAAAATGAAAACGCAAGGGGAAAAAATAAAACGTCTAAAAAACAATATTA
TTATGAACAAGTTTTTCCAAAGTATTTACAATGCTTTTGAAAGAAAGACC
AAAATAAatgtttgatgaaaaaaaaaagattcaggGACAAATAATTTGTA
CTATAAAATGTCAACCAgtatttatttttgcaaaaaataattatggtaaa
taaaataaaaaaggtaaCAATatctttcaagttttgaaatttcctaAAAA
CTCCTTCTACN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00055641-exon-scaffold_253-1491911889:1077272..1078382 | TCONS_00055641-exon-scaffold_253-1491911889:1077272..1078382 | Clytia hemisphaerica | exon |
| TCONS_00055641-exon-scaffold_253-1510915933:1077272..1078382 | TCONS_00055641-exon-scaffold_253-1510915933:1077272..1078382 | Clytia hemisphaerica | exon |
| TCONS_00055641-exon-scaffold_253-1575043694:1077272..1078382 | TCONS_00055641-exon-scaffold_253-1575043694:1077272..1078382 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_253 | supercontig | scaffold_253:1077272..1078382 . |
Blast
The following BLAST results are available for this feature:
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