TCONS_00055653 (transcript) - C. hemisphaerica

Overview
NameTCONS_00055653
Unique NameTCONS_00055653
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length226

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00055653 ID=TCONS_00055653|Name=TCONS_00055653|organism=Clytia hemisphaerica|type=transcript|length=226bp
GAACCAACAAATGGGACGGCAAACGTATGGGAAGTGTGAGCTTGAATGAT
GGAACTACGCTCGATTTTGATGatgtttggaaaattttggaggaaaagaa
attcgcgaaattcgaagaaattttccaacaaaaaccgaACATCGTCAACT
CGTTGCGTGATAGTTTTGGTCAGACACTTCTCATGATGGCTGTTGTTGAA
GATCGTTTCGACGTTTTCGTTCACTT
Run BLAST on NCBI

transcript from alignment at scaffold_255:41041..54641+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00055653 ID=TCONS_00055653|Name=TCONS_00055653|organism=Clytia hemisphaerica|type=transcript|length=13601bp|location=Sequence derived from alignment at scaffold_255:41041..54641+ (Clytia hemisphaerica)
GAACGTAAGTCAATACAGTTGATGTCCTCTGATTCAGCATTGTCAATCAA
CTAACAGTCACTTGACAAATTCCCTTTAAATTTCTCATAAAAGATACTTT
TTTATCGGACATTCTATCGCTATCATCTCCCTGGGGTTGGGGTAATTAAA
ATTCACGATTAAACGATTTACCATTCACGATTTGCGATGCACGATTTCCG
ATCCATGTTCCATGCATAAATTATGCTGATTTATGCCTAATCATGCTAAT
CATaacaaaatgatttgaaaacgGAGTTTAGTTCGGGGGGGGGTCGACAT
TCTTGAAAGATTCCCTATAAAGACCGAATGTTCTATTTCCTTGATTTTGC
AATACTATATTAATATAAACttcaagtgaagaaaaaaaattaccctcGTT
CGCAATGGAATGTAATATTCCAATCttcataatttttgtttttgctgttC
TGAAAGGTAAAGCTTCCATGGATGATATATATTAATAATTACTCCTGCAT
ATAGCAACAAATGGGACGGCAAACGTATGGGAAGTGTGAGCTTGAATGAT
GGAACTACGCTCGATTTTGATGGTAAGTTTGATTCGGAATTTTGTTTTCA
TATATatggaaaattttataaattttcaactatacaacgagtctgctaaa
tgacgcgccttgCGCACCCACGCGCCTACGCGCCCtggtaatttgacgcg
ccctaaaaatttgacgcgccttaaaatatcgacgcgccctggtaatttga
cgcgccctaaaaatttgacgcacCTTAAAATATCGAagcgccctgataat
ttgatgcgccctaaaaatttgacgcgcccagataatttgacgcgccctaa
aatatCGACGCACCCTAAAAAatcgacgcgccctgataatttgacactAC
CTAAGTTCAGTTACTTAGTAATGAAGATCAGTAATTTGAAGATCAGAGTT
TTCTCCATGTCTCATAAAGAATGTTGTTCTTATCCCAGTGTCGTTCTATG
AGCGATTGAGGATACAAACCTTTTTCCCGANNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGTCCCATTATTCCGT
CCGTTAAAACCGTCGAAAACTTAAGGCACATCAAAACCctaaggcgcgtc
aaattttcaaggcgcgtcgaaattctagggcgcgtcgaaatcatagggcg
cgtcaaagtttcaaggcgcgtcaaaatcatagggcgcgtcaaattttcaa
ggcgcgtcgaaattctagggcgcgtcaaattttcaaggcgcgtcaaattt
tcgaGGCGCGTTAGAAAtatgagggcgcgtgggcgcgtaaggcgcgtcat
ttagcagactcctaTACAACTATGCAATCAAAAGCTCGCAAGTACCCAAA
ACGAAACATCCTAATTTTCTATTCTGGTGTTCTATATTTTCTTGACAAAA
GCCTTTGAACATATAATCctataatacacccctgtgtcacagacccggtg
gaccctcaccccggtggaaaaaatatcctacaatttcaaccccactgcga
aattgctctatgattttatccccattgaaaactgaatgtaaaacaTTGCA
CTTCAAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgggaaa
aagttctaccggggcactgagacaggggtgttataataATTGTAGGCCAA
TCTATATCATAGGATTTGTACATCTGTTAAATGATATTTTCTATCCAGTT
TAAAGGGAAAAAATGCACTATAAATGTATCtgaagatttgatttgatttg
atttttttcatcattcaTTTGATTCAATGTTCAAATCATAATCTCATTTC
ATTGACAGTAGTGAACAAACAGACGATTAGACACTGCCAGACAACAAAGG
GCTAGCCATACGAGATTTAGTGTTGCGGGTGTGTAGTGGaacgagttttg
aaaaattttgggaaaaccGAAATACAGTAAACTCTCTTTAGTTCGAACCc
ttactattcgaatctttctataattcgaactgaaATATTAGTCCGCTCAG
TTGGAAAGTTAATTAAAGTACCGTCCGTAattatcaaatctttttttaat
ttgaagaaaatcctTGGTCCCTCGAAGATACGGGTCCTTATTTTACCCGA
AATGCTCACTTTCTTATTATCAATAGctaaattttgtcaaaatttcaagt
caatagcatcTTCCAATCACTAGATACGGTATCCTATGACTGATTTAGTT
AAAAGGGCAAATTCGAAGGGATCTGTAAAAGTAAAATAAACGATACCAGC
AGGTCTCGAAGTTGTCccacaaaatttgagcaaaaaaaaattagaggGGG
TCCTATTTTCGGTATTCTCAGAGACTGAAGACGTCACCCAAACCCCTTTT
ACCCAAGATTCTCAAGGTTTAACgttttagaaataatttgagaatatttt
aagacttgATGGCCTCACTTGAAAGGGTTTTTCTCTTATTACGAAATGGG
AGGGATACAAGGCATACAGGAAAACTAGgagccgggaggcgggaggcagg
aggctgaaaacgaaagtgggaggcgggaggctgaaaacgaaagtgggagg
cgggaggctaaaatcgaaagtgggaggcgggaggctgaaaacgaaagtgg
gaggcgggaggctaaaatcgaaagtgggaggcgggaggctgaaaacgaaa
gtgggaggcgggaggctaaaatcgaaagtgggaggcgggaggctgaaaac
gaaagtgggaggcgggaggctaaaatcgaaagtgggaggcgggaggctga
aaacgaaagtgggaggcgggaggctgaaacaAAAGTGAGAGGCTCATTTA
TGAGGCCACGCACAAACGTTTTTGGTCAAGGGATAGGTAACAAAGAGcag
atcattttattttttataaacacacacaatccatcaaaaaaaatatttca
aatagtaTGTTTTGAAACCAAGTGTTTTCCTAGGAAGCGtttctctttat
aaaaatatagcAAGCTTTGTTTCGAAACTGCTGATGCaagatttaattac
aaaaaaatataacatgatAGTTTTCGATTTAGGGTATGTTTTCCAattta
tcagaaatgcactgtaagggtggaaatttcagcaaatctatgGGAAAAAT
TATTGCTCAAAAAATCTTGATTGCTCGAAAATCNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGAAaaaatg
cattgtaagggtatgaatttttttctgcactgtaagggtgcgattctaaa
agccaatttttttgccGCACATACTGTCAATTGGTAAACCCCCATCCCCC
GAGAGTGTCACCTCAGCTCAATGCAGTTTGAttcaagtacagtatttcaa
aatggatcaggttggTTAGCGGGTGGAGAATCAAGAGTCAAGAGTTatga
ctttcccttctcttgaaaatccaatgttccaaaactttcaactaaaaaaa
atgcaaaaaaatccggctttcgtctttttttattatcttataaacacttt
tttcagaaccacaagtgaaaagaaaagcaaaactgaCTGAATATGCTGCC
AAAAAAGTGTTTGACAGGtctagaaaatgattgacaggcccGGGTTAGAT
AtttccgtgagcaatctcgttatatttataaaaaagtaatatACTTGTGG
AAAGCCCAATTATTCTACTTTTTCGAATGCTGTGTCatggaattttttaa
acaattaaaTAGAACGGGGTTTCCTCTGATGTAAACAAACCTCGAGTCCT
ATCCTGAAAATTGACATTGagcgtagaaaaaaagacaaatgaaagtattt
tcatttttaattcatATTTCCAATAATTAAAGACTAACTTGGAAACACCA
AGAGTGAAATGTAGCTAAATGCTTAGAACGCCTAACGCCTTgcgacttag
aattttttttcaaaactgaaaatttgactCCGGCTCGAACTACCAATGTC
TCTTGTCAATGATTTTGAGACCGGCACGCTAGCAATGTACTATCGAGCCG
ATACAAAACTGCACAATTTAAAaatacttataaaaaacactactgcaTAT
ACGGGTGAACTGACCTCATGGGCTAGGCTAACTGTTTAGATCAAGTACAT
ACTCCAGGCTCCGTAAGGTTCCttattataattgaaaaagCGTATACTAA
CAAACGATACGGAACTCGTGAGAGTGCTTTTTAAACCGTTGTCTTTGTNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNctttcgttt
tcagcctcccacctcccactttcaatttcagcctcccgcctcccactttc
aatttcagcctcctgcctcccactttcgttttcagcctcccgcctcccac
tttcaatttcagcctcccgactcccggctcccggttcagcctcccgcctc
ccggctcCCAGTTTTCCTGTATGCCGGATACAAAGACAATCAACtgaaat
tataataaaatagataaaaaaatgtcaatttcatcCTCAAGGGAacgatt
tattttttttcttctcctgctataaaatgaaagttttcgggcatacagga
aaactgggaggcgggaggcgggaggctgaaccgggagccgggagtcggga
ggctgaagTCGAAAGTGGGatgcgggaggcgggaggctgaaaacgaaagt
gggaggcgggaggctaaaatcgaaagtgggaggcgggaggttaaaatcga
aagtgggaggcgggaggctcaaaacgaaagtgggaggcgggaggctgaaa
acaaaagtgggaGGCGAgaggctgaaaacaaaagtgagagGCTCAATTAT
AAGGCCACGCTCAAACGTTTTTGGTCAACGGATAGGTAACAAAGAGCTGA
GAAAAATcagatcatttattttttataaacacacacaatccatcaaaaaa
aatatttcaaatagtaTGTTTTGAAAACCAAGTGTTTTCTCCGTTCTCTC
TTTTTGGTCAGCCCGCTGAGCTTTCAAATCGGCTTTTTCCATCATCATCC
GTTTCCGttcaaaaaaagtgtttccCCGATTTACGTTTTCGGCAAAACAT
TCCCGAACGGATTTCTAGAACCTAGCATCGCTTATGGTTAGCGCTAAGCA
AGTATTAGTTGTTATTCTGATCGGAATACTCTCAAATGATTACGgacaaa
ataacaatgaaaatccTGCCGATTGTTTTGTATGCgcgaatgaaaatgtt
ttacgcaattacattacgtcatttttNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNTTTTGTTTATgactttttcccgcgcttttcctataaagtt
tacagacgcaCTTCTtcgtaaaagagaaaaatatttccttcgcaCACTTA
CTTATTCAtgtcagttttatttataagaatcgatcaatctaaaaagttaa
aatactttgagtacatgttttttttataagcaagtgtatgccccttggtc
aggctcgagtatgcttaagctttcaaagcatccagacatGGAGATTAaga
attattatgcttttgattcaaatttgaaccaaattttttaataaaatctt
taaaattttgttaatattcgattcaaaaagcatttaaatttttgagcagt
ggaatgtggctAGCCGTGNTGTATGCgcgaatgaaaatgttttacgcaat
tacattacgtcattttttattacattttatggtaatataaaaacatttgc
tTTCGCACAGCAGCTACGATTaattagctcagtcggtagagcatcaaaTT
CTAGGTCAGATGGTCCAGTGTTCGATTCCCACCACAcgtattttttcttt
cttttctaaaCTAATCTATCCACACGGATCGAAAatcggcaagtacaaaa
cgcctactacctactacttaatatttactacctactacttactacctaca
atccgtgccataatatatttgcacttttggctaatttaccatttttcgaa
aattgaagttcgagcgagaatgtcaattttaggccctcaacttgatNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNTAgtcttcatatgcttataagcgttatgcttata
aaaaaaacatgtaagtaGAGCCCTATGTTTCACTGGGTACTTGCTGAAAA
TCCTTTGACATGTCTTtgacatttattgacaaaatgacccttttgaACCA
AACTATTGACAGGGTCGTAAAATATGACCTTTGTAGACTTCATTTTATGT
AGCAACAATTCTTATTGTGCTCAATAAGATGCTTTCAGTATCGCAAggta
gaaattttcagtaggaaaatactaccttaaaggaagaaattttgacggaa
agaaaatttggcggatttgactgaaatccgccaaattaagttcccgccaa
aatttcctttttccgccatccgccaaattaaattcccgccaaattaaaca
ttttgaaaaaatgatcttttttaaggtgtttttgctattttttcgctgtt
ttgacgccatcttaaggttgaatttttaagcgaccaccaaattaaattcc
cgccaaatttagttttttcgtccatccgccaaaataaattccctctgaaa
aaacttttttggccatccgccaaattaNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNGTCAAAGTATtgacgaaatgaaatttttgataaaa
atattgacacagttattgaatattaaaagcttcgcaaaccaattccaaga
aatattttggcaccATTTAATATGATGCAGATCATACAATAGGATAGAGA
TAGATTGACCCCCTATTTATATTACAGAGCCTTTTTTAGACATTCACGTG
TATTCTTATCGTCTTATAATGGGGGTCTTAAGAGAGAGTAGgtttaggaa
aaagaaaaaataaagataatggccttttgttttatacttcagtatactta
tatgaggcgaagagaatatttactcactacgtaaatatgctaaatattct
tttagataacactNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtctggtctgtaaagt
atacaaactgagtaggtagtaagtagtaagtagtaggtagtaagtattaa
gtagtaggtagtaggcgttttgtacttgccggaTCAACAATATTTCAGAC
ctaatcaaaaatattgatttttcaagcacgGAGGACgagaaatttatctt
tttaaatagcAGATCTTGTTGTTGTCCTTTAATCTTTTGNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNgcctccc
gactcccggctcccggttcagcctcccgcctcccggctcCCAGTTTTCCT
GTATGCCAGTTTTCGTGCGTTTGTttaatttgctttttatatttgatggT
GGTGGGGTGACTGGTTTTTGTGGAAaagtgaatgaatgaatgaacgaatG
TAATCGgagaaatttagattttttaccTTTCATTTTCTGAACCTCTGCTC
TAGTGCTgtatatagaccttttcgcctttccgtccgccatcttgaattgt
atgcaaaaatacaggaacgaaaatgccgtggttggatttagttggaatgt
atgcaaaacatatgcataagtttacacaaagattaaaaagacaacaaagc
atcttataaatataaataaatattataatcattagaacaataaaagatag
aatttcttaatccaaaaggaaatatttacagaacaacaaaagccttttag
gaatttgtccttaaagacattgcatattctattttcatgccattaaaaaa
ttccatgaagacggagtacacacatcaattttcaaaacacgcaaactgaa
agcagtaattatgacgtcacgcattcagcgggttcagatcgatgttttga
tttgatcgtttggcggctctattcccaggagaataatttgccgtcagccg
aataaggattgtcttttaccttcgcgggggatttttcagtttgagtttct
gtctaatgttatggtcttttgaagtgcttgttctaagagatcagtgaata
taattgtttttagttttcaagagaagcaaatttaatctttcttctacaag
attacactttaatataatgccaattatgcatgtaagtttttaattcNNNN
NNNNNNttgatactttctttttgcatatgttttgcatactttctaaggga
atttcaccacggcaattcggccaccataatttttgcatacaattcaatat
ggcggatgtaaaggcgaaaaggtctattttagtgaaagtacgggtgcaaa
attaaattttttcaagctaggatttttttaaaaataaaacttagtTCAGC
TTTATATGACGATTTGAGAAACACATTACATTAATATTACttctattttt
tcatcttttatcacaatttcgtGTTTCTTTTTGAGAATAATGCATAGTTT
TTTCGGATTGCATCTCAAGTAGTTCATGTGTACTTTTCTGTTTTATCTTT
GCTGTTTGTGTAATAGTTCacgcaaaatttcatttttgacaaataattct
attttgaaaactttttcacattCTGAGAAATTTCTTTCTGAACAAAAACT
TTTCatcaaaaccaaaataaaataatccATCAATCtggaaataaattttc
aattccgttttcagtttttcaactTTGAATCTTCTTTTAGTTCTTAAGAT
ccagatcttcatttttttctaacttcaacttttttaccgtcacaaataaa
aatgatttctcgctgagcaaaaagttttcgttcaaaattcaaaatttttt
cgccatcaattcggaaatatttttctcgttctgtttgcaaaatttcagct
tcaaagtattTTTGGTTCCTGAGATATCGagattcattttttgttgaact
ttttttttactccatgaaaagtttgaatttcttctttttttcttcagatg
tttggaaaattttggaggaaaagaaattcgcgaaattcgaagaaattttc
caacaaaaaccgaACATCGTCAACTCGTTGCGTGATAGTTTTGGTCAGAC
ACTTCTCATGATGGCTGTTGTTGAAGATCGTTTCGACGTTTTCGTTCACT
T
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_035023XLOC_035023Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00055653-exon-scaffold_255-1491911889:41041..41044TCONS_00055653-exon-scaffold_255-1491911889:41041..41044Clytia hemisphaericaexon
TCONS_00055653-exon-scaffold_255-1510915933:41041..41044TCONS_00055653-exon-scaffold_255-1510915933:41041..41044Clytia hemisphaericaexon
TCONS_00055653-exon-scaffold_255-1575043694:41041..41044TCONS_00055653-exon-scaffold_255-1575043694:41041..41044Clytia hemisphaericaexon
TCONS_00055653-exon-scaffold_255-1491911889:41545..41612TCONS_00055653-exon-scaffold_255-1491911889:41545..41612Clytia hemisphaericaexon
TCONS_00055653-exon-scaffold_255-1510915933:41545..41612TCONS_00055653-exon-scaffold_255-1510915933:41545..41612Clytia hemisphaericaexon
TCONS_00055653-exon-scaffold_255-1575043694:41545..41612TCONS_00055653-exon-scaffold_255-1575043694:41545..41612Clytia hemisphaericaexon
TCONS_00055653-exon-scaffold_255-1491911889:54488..54641TCONS_00055653-exon-scaffold_255-1491911889:54488..54641Clytia hemisphaericaexon
TCONS_00055653-exon-scaffold_255-1510915933:54488..54641TCONS_00055653-exon-scaffold_255-1510915933:54488..54641Clytia hemisphaericaexon
TCONS_00055653-exon-scaffold_255-1575043694:54488..54641TCONS_00055653-exon-scaffold_255-1575043694:54488..54641Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_255supercontigscaffold_255:41041..54641 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.05282	0	0	0	0	0	0	1.28316	0	0	0	0	0	0.0125425	0	0	0	0	0	0.608386	0	1.0553	1.25283	1.44166	0	0	0	0	0	0
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00055653 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
back to top