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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00055657 ID=TCONS_00055657|Name=TCONS_00055657|organism=Clytia hemisphaerica|type=transcript|length=852bp
NATAGTGTCATTTCCTGAAACACGAGGAAGGTAGATTTTGGTTTGTGCCA
TGCTTGCCATCATGTTCCCTGCAATGATTTCCATTATTCCTGGCGTTGAA
GGTGATGAAAGCTTTCGATTATCTCGGATTAATTTTAAGAAGTTGGTCAA
CCATTGTCCAAAGTTTTCATCGAAAGAAATGACAAAGTCCTGACTTTTTG
TGTTTAGATTTAAGCAAGGATGTTGCTTCATTTTGTTCAAGTTGCTTGAA
GCCAGTAAGACGAGAACTCCAACAATAGTAAACTGTTCATTTTCGAGAAT
CTGCCTGTGAACATAACACCATGTTTTCAAGACTGCATTAACTTTCGCCA
GATCCTTGTCAATAGGTTTTTCGTTTTCACCGACCACGAAAACAAACAGC
AAGCCATGATTGGGATAAATGCAAACGATTGTGTTGTCATAGTAATCAGG
GCACTCAGAAAAATGCAGAACACTCTCGATCTTTTCATCATTGAGTCCAA
GTATTCTGAGATGGCTTATGGGATTATATCCGACGAGAATTTTTCCTCCA
AGAAGCGATGAATGTTCTTCAAGACTGGCGATAACTTCTTTCATGTTTAC
ATTTCGTACGTAATACGAGGGTGGGAAGGTTTTGACGCCGATATGGTCTT
TGTAATACTGCATTGCTCTTTGATTGAATTCTTTGACAGTTTTGGCAACT
GAAGGACCGGTGCTGATTGGGATACATGTATGGTCATCTGTGATTCCATT
TTCGTCCGAAACTTCGAATGCGTGTATATTGGAAGACCTTCCACAATTAT
GAGCGTAGACTAATGTTTCTCCTTTCCTACTTGTATGATGATGATTGCCT
GG Run BLAST on NCBI protein sequence of TCONS_00055657-protein >TCONS_00055657-protein ID=TCONS_00055657-protein|Name=TCONS_00055657-protein|organism=Clytia hemisphaerica|type=polypeptide|length=284bp
PGNHHHTSRKGETLVYAHNCGRSSNIHAFEVSDENGITDDHTCIPISTGP
SVAKTVKEFNQRAMQYYKDHIGVKTFPPSYYVRNVNMKEVIASLEEHSSL
LGGKILVGYNPISHLRILGLNDEKIESVLHFSECPDYYDNTIVCIYPNHG
LLFVFVVGENEKPIDKDLAKVNAVLKTWCYVHRQILENEQFTIVGVLVLL
ASSNLNKMKQHPCLNLNTKSQDFVISFDENFGQWLTNFLKLIRDNRKLSS
PSTPGIMEIIAGNMMASMAQTKIYLPRVSGNDTX Run BLAST on NCBI transcript from alignment at scaffold_255:33863..34714 Legend: exonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00055657 ID=TCONS_00055657|Name=TCONS_00055657|organism=Clytia hemisphaerica|type=transcript|length=852bp|location=Sequence derived from alignment at scaffold_255:33863..34714 (Clytia hemisphaerica)
CCAGGCAATCATCATCATACAAGTAGGAAAGGAGAAACATTAGTCTACGC
TCATAATTGTGGAAGGTCTTCCAATATACACGCATTCGAAGTTTCGGACG
AAAATGGAATCACAGATGACCATACATGTATCCCAATCAGCACCGGTCCT
TCAGTTGCCAAAACTGTCAAAGAATTCAATCAAAGAGCAATGCAGTATTA
CAAAGACCATATCGGCGTCAAAACCTTCCCACCCTCGTATTACGTACGAA
ATGTAAACATGAAAGAAGTTATCGCCAGTCTTGAAGAACATTCATCGCTT
CTTGGAGGAAAAATTCTCGTCGGATATAATCCCATAAGCCATCTCAGAAT
ACTTGGACTCAATGATGAAAAGATCGAGAGTGTTCTGCATTTTTCTGAGT
GCCCTGATTACTATGACAACACAATCGTTTGCATTTATCCCAATCATGGC
TTGCTGTTTGTTTTCGTGGTCGGTGAAAACGAAAAACCTATTGACAAGGA
TCTGGCGAAAGTTAATGCAGTCTTGAAAACATGGTGTTATGTTCACAGGC
AGATTCTCGAAAATGAACAGTTTACTATTGTTGGAGTTCTCGTCTTACTG
GCTTCAAGCAACTTGAACAAAATGAAGCAACATCCTTGCTTAAATCTAAA
CACAAAAAGTCAGGACTTTGTCATTTCTTTCGATGAAAACTTTGGACAAT
GGTTGACCAACTTCTTAAAATTAATCCGAGATAATCGAAAGCTTTCATCA
CCTTCAACGCCAGGAATAATGGAAATCATTGCAGGGAACATGATGGCAAG
CATGGCACAAACCAAAATCTACCTTCCTCGTGTTTCAGGAAATGACACTA
TN Coding sequence (CDS) from alignment at scaffold_255:33863..34714 >TCONS_00055657 ID=TCONS_00055657|Name=TCONS_00055657|organism=Clytia hemisphaerica|type=CDS|length=852bp|location=Sequence derived from alignment at scaffold_255:33863..34714 (Clytia hemisphaerica)
CCAGGCAATCATCATCATACAAGTAGGAAAGGAGAAACATTAGTCTACGC
TCATAATTGTGGAAGGTCTTCCAATATACACGCATTCGAAGTTTCGGACG
AAAATGGAATCACAGATGACCATACATGTATCCCAATCAGCACCGGTCCT
TCAGTTGCCAAAACTGTCAAAGAATTCAATCAAAGAGCAATGCAGTATTA
CAAAGACCATATCGGCGTCAAAACCTTCCCACCCTCGTATTACGTACGAA
ATGTAAACATGAAAGAAGTTATCGCCAGTCTTGAAGAACATTCATCGCTT
CTTGGAGGAAAAATTCTCGTCGGATATAATCCCATAAGCCATCTCAGAAT
ACTTGGACTCAATGATGAAAAGATCGAGAGTGTTCTGCATTTTTCTGAGT
GCCCTGATTACTATGACAACACAATCGTTTGCATTTATCCCAATCATGGC
TTGCTGTTTGTTTTCGTGGTCGGTGAAAACGAAAAACCTATTGACAAGGA
TCTGGCGAAAGTTAATGCAGTCTTGAAAACATGGTGTTATGTTCACAGGC
AGATTCTCGAAAATGAACAGTTTACTATTGTTGGAGTTCTCGTCTTACTG
GCTTCAAGCAACTTGAACAAAATGAAGCAACATCCTTGCTTAAATCTAAA
CACAAAAAGTCAGGACTTTGTCATTTCTTTCGATGAAAACTTTGGACAAT
GGTTGACCAACTTCTTAAAATTAATCCGAGATAATCGAAAGCTTTCATCA
CCTTCAACGCCAGGAATAATGGAAATCATTGCAGGGAACATGATGGCAAG
CATGGCACAAACCAAAATCTACCTTCCTCGTGTTTCAGGAAATGACACTA
TN
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00055657-exon-scaffold_255-1491911889:33863..34714 | TCONS_00055657-exon-scaffold_255-1491911889:33863..34714 | Clytia hemisphaerica | exon |
| TCONS_00055657-exon-scaffold_255-1510915933:33863..34714 | TCONS_00055657-exon-scaffold_255-1510915933:33863..34714 | Clytia hemisphaerica | exon |
| TCONS_00055657-exon-scaffold_255-1575043694:33863..34714 | TCONS_00055657-exon-scaffold_255-1575043694:33863..34714 | Clytia hemisphaerica | exon |
The following polypeptide feature(s) derives from this transcript:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_255 | supercontig | scaffold_255:33863..34714 . |
Blast
The following BLAST results are available for this feature:
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