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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00055702 ID=TCONS_00055702|Name=TCONS_00055702|organism=Clytia hemisphaerica|type=transcript|length=369bp
GCTATTTATAGCAAGACAGTTAAGTCAAAAACCCTTATCCAAACCTTAcc
tcaattaatttttttgtagaaattaGAAATGAGATCATTAGGtttctttg
ttgattttttttaggGATGCTAAATGAATGTTGAACTACAAAACAAGATT
TAATTGATTCAAACtgggaaaaagaaaatcatcttACAAAAAGgtcTTAA
AAGCTAGTGGAAGAAGTGTCTGGATAGCAATTTTCAAGaCCTTAAGGATC
GGACTGATTGGATTGGATCGGACAGATTGCTCATCGTCTCGACGTCTTGT
AGCGATCAGATTCGTCAACCTTTATAACATCAATCCCATGTACTATTGCc
atttggattttgaattttt Run BLAST on NCBI transcript from alignment at scaffold_257:8964..10678- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00055702 ID=TCONS_00055702|Name=TCONS_00055702|organism=Clytia hemisphaerica|type=transcript|length=1715bp|location=Sequence derived from alignment at scaffold_257:8964..10678- (Clytia hemisphaerica)
GCTATTTATAGCAAGACAGTTAAGTCAAAAACCCTTATCCAAACCTTACC
TCAATTAATTTTTTTGTAGAAATTAGAAATGAGATCATTAGGTTTCTTTG
TTGATTTTTTTTAGGGATGCTAAATGAATGTTGAACTACAAAACAAGATT
TAATTGATTCAAACTGGGAAAAAGAAAATCATCTTACAAAAAGGTGTATA
TGTTTATAACTTGATATTAACTTGTAACATATGTATAGTATGTTGGCTTT
ACCCCCTTCACATACGTAGGCTTTTGAAATTACCCCCATCCGGGGGGTAC
AAGGGTTGGCGAATGAGGGGTATGTGCAGACGGGACCTCCGAAAACCAAC
CCTTAGAGAGACTGATTTTTGCTGAAAAGGTGACCCTTAGAGAGACTTTT
TGAATTTTTTTTTTCGATTTTTGAAGAAAGTCATACCCTTAGAGAGACTT
TATTACAATTTCTTCTCTGGAAATCAAAAAATTTTCTAAAAATCTTGAAA
AANATCAAAAAATGTCCTAAAAATCTTGAATATTCCGGCCCTTTGAGAGA
CTAATTTAAAACTTTCTGATTTTTCAAACCCTTAGAGAGACTTTGAAAGG
TGAAAAAACCGACCCTTACCGTCCGCACATACCCATCATCCATTTTTGCC
TAAGTAACCCCCCCCCAGGCCCCTACTAGTATCCCCCAGATTGAAGGGTT
TATACATGAGCAATTGTTTAAATTAAGGGATTCTTGGAAAAAGTATATTC
AACTTCAACTTCCTTTTGTGTTTGTTGATGAAAATACAGAACATCCAGCC
AAACTTTCGCTGAAATTTGGTTCTATTGAAAAATGTTGATTTGTACTCTC
AGACAGGTGGTCTGAAATTTTTGAATAAAACTATTGGCCAAGGGGTGTTA
TAAGAATGTCTCGAGTGGAAAATTATACAAAGGCTGCTTATGACCGCACC
CTCCCCCTCAGAGCATATGTACTTTATATGAATGGTCCTAAATGATGTCC
ATGTGTTCTGTTTTCAAATAAATTTAGCCATGTCACAAGTGTTCTAGTGG
AATATTAAACACTCAGTATTCTCTAATTTCAAATTTTATTTTCAGGTCTT
AAAAGCTAGTGGAAGAAGTGTCTGGATAGCAATTTTCAAGGTAAGGATAT
TTCAATTTGAAATAATTCTATGAAATTTTTGGACTGTGGTAATTTTTGCT
AATTATTTCAGGGTACACGAACTGTGACAAGGAGTTGTACATAGTAATTA
GTTCTAACACCTGTTTTAAGGGGGTCTGAACCATGTGAAAATTTCTCTAA
GGAAAGGAGATCCCATTGGAAAGGAATTGAAATGAATTCTTATTTTTCTG
ATCAGGAATGGAGACTTTTCGGTATTTGTAAACAATCTAATAGGAAATTT
GCCCAATTTATGACCCATTCCCCATTTTTAGGCAATATTAGTGTGGTATG
TGAGTGGTAAGCAGTCAGATTGAGAATCGGAATTTTTTAAGATTAGGGGG
GTGCCAAGATGGGAAGATCCGACCTATCCACACTATGAAATTATGTATGT
TATGTAAATTTTATTTCTCTTTTTCATTCTTTAGACCTTAAGGATCGGAC
TGATTGGATTGGATCGGACAGATTGCTCATCGTCTCGACGTCTTGTAGCG
ATCAGATTCGTCAACCTTTATAACATCAATCCCATGTACTATTGCCATTT
GGATTTTGAATTTTT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00055702-exon-scaffold_257-1575043694:10486..10678 | TCONS_00055702-exon-scaffold_257-1575043694:10486..10678 | Clytia hemisphaerica | exon |
| TCONS_00055702-exon-scaffold_257-1575043694:9539..9583 | TCONS_00055702-exon-scaffold_257-1575043694:9539..9583 | Clytia hemisphaerica | exon |
| TCONS_00055702-exon-scaffold_257-1575043694:8964..9094 | TCONS_00055702-exon-scaffold_257-1575043694:8964..9094 | Clytia hemisphaerica | exon |
| TCONS_00055702-exon-scaffold_257-1510915933:10486..10678 | TCONS_00055702-exon-scaffold_257-1510915933:10486..10678 | Clytia hemisphaerica | exon |
| TCONS_00055702-exon-scaffold_257-1510915933:9539..9583 | TCONS_00055702-exon-scaffold_257-1510915933:9539..9583 | Clytia hemisphaerica | exon |
| TCONS_00055702-exon-scaffold_257-1510915933:8964..9094 | TCONS_00055702-exon-scaffold_257-1510915933:8964..9094 | Clytia hemisphaerica | exon |
| TCONS_00055702-exon-scaffold_257-1491911889:10486..10678 | TCONS_00055702-exon-scaffold_257-1491911889:10486..10678 | Clytia hemisphaerica | exon |
| TCONS_00055702-exon-scaffold_257-1491911889:9539..9583 | TCONS_00055702-exon-scaffold_257-1491911889:9539..9583 | Clytia hemisphaerica | exon |
| TCONS_00055702-exon-scaffold_257-1491911889:8964..9094 | TCONS_00055702-exon-scaffold_257-1491911889:8964..9094 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_257 | supercontig | scaffold_257:8964..10678 - |
Blast
The following BLAST results are available for this feature:
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