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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00055798 ID=TCONS_00055798|Name=TCONS_00055798|organism=Clytia hemisphaerica|type=transcript|length=307bp
TAGCCAGTAGCGGAAATGTTCAGAACACAAGTTATGTGCCATGCAGGCGA
AGAATATTGGAAGCCAGCTGTTTCTGTTTTCGTCTTACTTGGGAAAGAAT
TTGACTTACCAGATTACGGCTTTGGTGACTCTGGCTCATCGCTCTTGGAG
CAACTTATTATACACCACAAGCTCGATTTGTTGTTATGATGGAGGATGAA
AGACTGCAAGAGAACAAACATAAACGGTCTCCACCTAAGATTAATGAAAC
ACATCAAGTCCATCCCTCTTCTTCAGCTGATAGTAGATCTTCACCAAAAG
TAAATAA Run BLAST on NCBI transcript from alignment at scaffold_26:151620..152385+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00055798 ID=TCONS_00055798|Name=TCONS_00055798|organism=Clytia hemisphaerica|type=transcript|length=766bp|location=Sequence derived from alignment at scaffold_26:151620..152385+ (Clytia hemisphaerica)
TAGCCAGTAGCGGAAATGTTCAGAACACAAGTTATGTGCCATGCAGGCGA
AGAATATTGGAAGCCAGCTGTTTCTGTTTTCGTCTTACTTGGGAAAGAAT
TTGACTTGTAAGTTTTTGCTTTGTTAACCAATAGTTCCTTGCCTTTGATT
CGTCCCTTGCCTTtaatcgttcgttcgttcgttcgttcgttcgttcgttc
gttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgt
tcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttcgttt
gttcgttcgttcgttcgttcgaaaCAATAAAACCTGATTTCCATTGACTT
CTTTTTCAGACCAGATTACGGCTTTGGTGACTCTGGCTCATCGCTCTTGG
AGCAACTTATTATACACCACAAGCTCGATTTGTAAGTcgaaacaataaaa
caaagtaATCTTTCGTAGGTCAAATTTGGTACAGGATGCCTTGCATGCTG
GATATATCTGTCTCTAAGTTTGGAGCACAAAACCAGCTTATAGCTGGTTA
CAAGACACATTTAAAAGAAGAACTAAAATGCAAAAGTAATTGCATACGTA
AGATCCAATCCCattaaatctttttcttcttccctCAGGTTGTTATGATG
GAGGATGAAAGACTGCAAGAGAACAAACATAAACGGTCTCCACCTAAGAT
TAATGAAACACATCAAGTCCATCCCTCTTCTTCAGCTGATAGTAGATCTT
CACCAAAAGTAAATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00055798-exon-scaffold_26-1491911889:151620..151726 | TCONS_00055798-exon-scaffold_26-1491911889:151620..151726 | Clytia hemisphaerica | exon |
| TCONS_00055798-exon-scaffold_26-1510915933:151620..151726 | TCONS_00055798-exon-scaffold_26-1510915933:151620..151726 | Clytia hemisphaerica | exon |
| TCONS_00055798-exon-scaffold_26-1575043694:151620..151726 | TCONS_00055798-exon-scaffold_26-1575043694:151620..151726 | Clytia hemisphaerica | exon |
| TCONS_00055798-exon-scaffold_26-1491911889:151979..152050 | TCONS_00055798-exon-scaffold_26-1491911889:151979..152050 | Clytia hemisphaerica | exon |
| TCONS_00055798-exon-scaffold_26-1510915933:151979..152050 | TCONS_00055798-exon-scaffold_26-1510915933:151979..152050 | Clytia hemisphaerica | exon |
| TCONS_00055798-exon-scaffold_26-1575043694:151979..152050 | TCONS_00055798-exon-scaffold_26-1575043694:151979..152050 | Clytia hemisphaerica | exon |
| TCONS_00055798-exon-scaffold_26-1491911889:152258..152385 | TCONS_00055798-exon-scaffold_26-1491911889:152258..152385 | Clytia hemisphaerica | exon |
| TCONS_00055798-exon-scaffold_26-1510915933:152258..152385 | TCONS_00055798-exon-scaffold_26-1510915933:152258..152385 | Clytia hemisphaerica | exon |
| TCONS_00055798-exon-scaffold_26-1575043694:152258..152385 | TCONS_00055798-exon-scaffold_26-1575043694:152258..152385 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_26 | supercontig | scaffold_26:151620..152385 + |
Blast
The following BLAST results are available for this feature:
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