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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00055911 ID=TCONS_00055911|Name=TCONS_00055911|organism=Clytia hemisphaerica|type=transcript|length=1411bp
GGCAAGTGTACGGTACCTCATTGGCAACGAAATTAGACCAATTACTGGAG
GGGTAACTACATGGTAAAAACCTTATATTGCAGTTTCACACCCTTTAAAG
GATATCCCTAGTGCACCGTTACTATTTCcggtaaaaacattttttaccgA
AAAGGAGCTGATCAATGATAATTTAGGTGAGATGAAAGCGATCAAACAAG
GAAAGAAAAATCAGACGCAGCAGTCATTGCTGAGTTATCAGGAAATCGTT
CGGTGTGATTAAGGTGAATATTTGAAATAGTTTTCATTTTAAGCTGTAAA
gagatttctcttttgcacgaTAATATGAAAAAAGAAGGGCTGGAGCTTAA
AGAGGTTTAAATCACAACGGGTATTTTACGTCTTAAAGGCAAGTTGTAAT
TAAAACAGATTTAGACTCAGTTGAGTTTAATCCTGTGCAATAGATACAAA
AAGCTTAAATTCCAAATTATTTTTAGCTTCATTGCAAAGGGACTTTGATA
TTGATTGCAACTTATCAATATTTTCAGGTTTAAAAGTATCTTGTTTCTTG
GTTCGTTCAAAAGTTTGGAGACCAGGCTTTAAAATGTAGAAATATAACAT
ATAATCACTGCTTACACATAATATCAGCTAGACGATTCCATTGTGAAGAC
CAAGTCACTAAAAAGGGTAAAATTTTGAAGACAGGATGATTGTAAAACAT
TCATAGATGGGAGCAATCGGAATGAATTGTGGATAGGTGTTGACGTTTGT
CCCGAACTCTGTCGCTGCTTTTTCACCTAAACCTCCAATTACGGCTTTAA
GCTTCTGATCTTATTTTTAGGGCtaaattgaggtattttgggTTTTGTAC
TCCATTTTAGTACGTTGATCCTTAACTTAGTAACTTAACTTTCCAGGCTG
AGAATTGTTCTATAAAAAGTGTAGTTTGTCCGTTTACCGACTAATTCGTT
GGGACTGCTTTTATTGAgttaaaaagttcaaaagtcgAATACCGGTATCC
AAGCCTTTTTACATAACATCATTCTCTTGCAGTGACACAGGAGTTTTCAC
AATATTCTTAGTTTGTTTAGTATATATTTAGCGTACAATATATTCTGACC
CCTAATCTCAAAACATACCGTTCCATAATGCACACCACNAGTATATATTT
AGCGTACCATATATTCTGACCCCTAATCTCAAAACATACCGTTCATAATG
CACACCACGCtgtgctctaaagggatgtggcGAATGTGCTGGTCTGACCT
ATAGTTTACGGCCAAACCATTGCAAAAACGCATTGTCTCTTAccaaaaac
gaaagcgaaagcgactgggcTCTAATGTTTCTGTTTATGATTGAAGCCAG
TTTTGTGCGGTTGTTTTGGACATTTTGTTAGTAGTCACACGTTTTCttta
caagaacaaac Run BLAST on NCBI transcript from alignment at scaffold_265:70800..72210 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00055911 ID=TCONS_00055911|Name=TCONS_00055911|organism=Clytia hemisphaerica|type=transcript|length=1411bp|location=Sequence derived from alignment at scaffold_265:70800..72210 (Clytia hemisphaerica)
gtttgttcttgtaaaGAAAACGTGTGACTACTAACAAAATGTCCAAAACA
ACCGCACAAAACTGGCTTCAATCATAAACAGAAACATTAGAgcccagtcg
ctttcgctttcgtttttggTAAGAGACAATGCGTTTTTGCAATGGTTTGG
CCGTAAACTATAGGTCAGACCAGCACATTCgccacatccctttagagcac
aGCGTGGTGTGCATTATGAACGGTATGTTTTGAGATTAGGGGTCAGAATA
TATGGTACGCTAAATATATACTNGTGGTGTGCATTATGGAACGGTATGTT
TTGAGATTAGGGGTCAGAATATATTGTACGCTAAATATATACTAAACAAA
CTAAGAATATTGTGAAAACTCCTGTGTCACTGCAAGAGAATGATGTTATG
TAAAAAGGCTTGGATACCGGTATTcgacttttgaactttttaacTCAATA
AAAGCAGTCCCAACGAATTAGTCGGTAAACGGACAAACTACACTTTTTAT
AGAACAATTCTCAGCCTGGAAAGTTAAGTTACTAAGTTAAGGATCAACGT
ACTAAAATGGAGTACAAAAcccaaaatacctcaatttaGCCCTAAAAATA
AGATCAGAAGCTTAAAGCCGTAATTGGAGGTTTAGGTGAAAAAGCAGCGA
CAGAGTTCGGGACAAACGTCAACACCTATCCACAATTCATTCCGATTGCT
CCCATCTATGAATGTTTTACAATCATCCTGTCTTCAAAATTTTACCCTTT
TTAGTGACTTGGTCTTCACAATGGAATCGTCTAGCTGATATTATGTGTAA
GCAGTGATTATATGTTATATTTCTACATTTTAAAGCCTGGTCTCCAAACT
TTTGAACGAACCAAGAAACAAGATACTTTTAAACCTGAAAATATTGATAA
GTTGCAATCAATATCAAAGTCCCTTTGCAATGAAGCTAAAAATAATTTGG
AATTTAAGCTTTTTGTATCTATTGCACAGGATTAAACTCAACTGAGTCTA
AATCTGTTTTAATTACAACTTGCCTTTAAGACGTAAAATACCCGTTGTGA
TTTAAACCTCTTTAAGCTCCAGCCCTTCTTTTTTCATATTAtcgtgcaaa
agagaaatctcTTTACAGCTTAAAATGAAAACTATTTCAAATATTCACCT
TAATCACACCGAACGATTTCCTGATAACTCAGCAATGACTGCTGCGTCTG
ATTTTTCTTTCCTTGTTTGATCGCTTTCATCTCACCTAAATTATCATTGA
TCAGCTCCTTTTcggtaaaaaatgtttttaccgGAAATAGTAACGGTGCA
CTAGGGATATCCTTTAAAGGGTGTGAAACTGCAATATAAGGTTTTTACCA
TGTAGTTACCCCTCCAGTAATTGGTCTAATTTCGTTGCCAATGAGGTACC
GTACACTTGCC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00055911-exon-scaffold_265-1491911889:70800..72210 | TCONS_00055911-exon-scaffold_265-1491911889:70800..72210 | Clytia hemisphaerica | exon |
| TCONS_00055911-exon-scaffold_265-1510915933:70800..72210 | TCONS_00055911-exon-scaffold_265-1510915933:70800..72210 | Clytia hemisphaerica | exon |
| TCONS_00055911-exon-scaffold_265-1575043694:70800..72210 | TCONS_00055911-exon-scaffold_265-1575043694:70800..72210 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_265 | supercontig | scaffold_265:70800..72210 . |
Blast
The following BLAST results are available for this feature:
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