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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00055921 ID=TCONS_00055921|Name=TCONS_00055921|organism=Clytia hemisphaerica|type=transcript|length=662bp
TTATTTCTCTTGAAAGTCTTTTTAGATATCTTTCTGTGTGATTACAATGT
CAGATTTTATAACTTGACTCAACAAAAAGCAGTAAACATTGTGTCAATTT
CACAATACATGCATAAGTCTTGTAGAGAGAAGTTGGTGACAAGAAAACTA
CTTTGCAACAATCAGTAGGTTAGAGgtGAAAGTATTTGCCCATTGCCCGG
TGTATTGAATCGCTAAGAAGGACGAAAAACACCACAACCAGAAGGTAGCA
ACAAAAAACAGCCAATCACGTTCAACAGATCAAGTCACATGACCCAAAAT
GACGAGCGTTTCATCGCAAGCATACGTGAATATGATTTTAGAGAAGAAGT
TATCTAAGCAACAACCCTTGTTCGCTGGAAATCTAcggaagaaatttttt
gtaCGCAAAGAAAGTGCTGATGAGGCCCAAACTGCAAATTCTTCACCTTC
AAATGCAAGCAATTATCGCATCGTTACTGCAAGGAGTATTACTAAATTAA
CATTGGAATGAATAAGATGAGCATTTATCTCTAAAGACAATGAAAATGTA
CCAGtttatgagtagaaagttttatgtgcgtgttcacaaaattgtatttt
aagctctcccttttttttctttgtcattacgattaatttatacgttgtaa
ctaccttttgta Run BLAST on NCBI transcript from alignment at scaffold_266:178761..179642+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00055921 ID=TCONS_00055921|Name=TCONS_00055921|organism=Clytia hemisphaerica|type=transcript|length=882bp|location=Sequence derived from alignment at scaffold_266:178761..179642+ (Clytia hemisphaerica)
TTATTTCTCTTGAAAGTCTTTTTAGATATCTTTCTGTGTGATTACAATGT
CAGATTTTATAACTTGACTCAACAAAAAGCAGTAAACATTGTGTCAATTT
CACAATACATGCATAAGTCTTGTAGAGAGAAGTTGGTGACAAGAAAACTA
CTTTGCAACAATCAGTAGGTTAGAGGTAGGCTATTAACTTCATTCAAAAG
TAGGAAATTTGCTACATCATCCTCCCTCTAAAGCATAAACTTTAACCTTT
CGTGGTGCTCAGTCAAGTTTGGCATCGTTAGACATTGAAGTCCATGATTG
ATACTACTTGCAGATTCGAAAGCATTTTAACAAACTGATAGCAAAGTCGA
TATAAAGATGTTCTTCTTCAACGtgctttttcttttcatttttaggtGAA
AGTATTTGCCCATTGCCCGGTGTATTGAATCGCTAAGAAGGACGAAAAAC
ACCACAACCAGAAGGTAGCAACAAAAAACAGCCAATCACGTTCAACAGAT
CAAGTCACATGACCCAAAATGACGAGCGTTTCATCGCAAGCATACGTGAA
TATGATTTTAGAGAAGAAGTTATCTAAGCAACAACCCTTGTTCGCTGGAA
ATCTAcggaagaaattttttgtaCGCAAAGAAAGTGCTGATGAGGCCCAA
ACTGCAAATTCTTCACCTTCAAATGCAAGCAATTATCGCATCGTTACTGC
AAGGAGTATTACTAAATTAACATTGGAATGAATAAGATGAGCATTTATCT
CTAAAGACAATGAAAATGTACCAGtttatgagtagaaagttttatgtgcg
tgttcacaaaattgtattttaagctctcccttttttttctttgtcattac
gattaatttatacgttgtaactaccttttgta
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00055921-exon-scaffold_266-1491911889:178761..178935 | TCONS_00055921-exon-scaffold_266-1491911889:178761..178935 | Clytia hemisphaerica | exon |
| TCONS_00055921-exon-scaffold_266-1510915933:178761..178935 | TCONS_00055921-exon-scaffold_266-1510915933:178761..178935 | Clytia hemisphaerica | exon |
| TCONS_00055921-exon-scaffold_266-1575043694:178761..178935 | TCONS_00055921-exon-scaffold_266-1575043694:178761..178935 | Clytia hemisphaerica | exon |
| TCONS_00055921-exon-scaffold_266-1491911889:179156..179642 | TCONS_00055921-exon-scaffold_266-1491911889:179156..179642 | Clytia hemisphaerica | exon |
| TCONS_00055921-exon-scaffold_266-1510915933:179156..179642 | TCONS_00055921-exon-scaffold_266-1510915933:179156..179642 | Clytia hemisphaerica | exon |
| TCONS_00055921-exon-scaffold_266-1575043694:179156..179642 | TCONS_00055921-exon-scaffold_266-1575043694:179156..179642 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_266 | supercontig | scaffold_266:178761..179642 + |
Blast
The following BLAST results are available for this feature:
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