|
|
Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00055928 ID=TCONS_00055928|Name=TCONS_00055928|organism=Clytia hemisphaerica|type=transcript|length=1710bp
ataaaagacaaacctccaaaatgtgatcggctattgctcattccgacatt
ttaaattttccgggggttttgctgtttgggtgccgggtgcatactcggcg
ccttgggccccgcagggttgctagtaacggctcgaatttcagtcaggttt
aaaaaaggggtacttttacccatattataataacattttgCCAGTTgggt
ataaaatgttatgaattgcgtgattctggtgtgcggcgatggctcaaggg
atagagcgctggcttccgaatccgaaggtctttctttggtggtggttcga
atcccactcggtgcgaaaattagacNNctcagaaactcagacagtcagaa
aagagaaagacggGATCAGAGATAAGGATCACATTTCGGAGGTTTGTATC
TTACGTTTTCCAAAGTCGAAAAGTCAAAGTTACCAGATTACATTCCAATA
TTCCACTTTATAAAGGATGTCAGAATATGGGCAGGTGAAACttggaaaat
tgaaattgaaaggagaagggaaaagtaaaaagaaaagtaagaaaaataaa
cgaaaaCATGATGAAGAAGGAGGCGAATCTTCATCAAGTACGAAGGCTTG
GAATGAGGAGACCAAAAAGTATCATGGCTGGTGGCCCTTAAAGACTTTTG
AGGATCTTGGTTGTGGTATTGTAGCTGTACAGACAAGTTTCAAGAACTCG
TATATTTTTGCAGTAGACAATGGAACTTTGAGATTAGGATCTGAGCATGA
TGATCATTTAGAAGCCATACCAATGGAAGAAGAAATCTTCACTTTGATCA
AAATCTCTGAAAATAAAATTGCCTTCAAATCAGGATAtgGTAAATACGTA
TCAGTGAACGCTCGAGGGGATGTTATGGCTCGTTCAGAAGCAGTTGGACC
TCAAGAACAAATAGAGGTTGTGATAGAGAATGAGAAAATCGCATTACAAG
GGCACAACGGCTATTTCATTACTATTAATGACGAAGGAGACTTCAAAGCT
CTCAGTCGAACCGCCaaagataaagaaattttcGTCTTGAGATCAAACGT
TTCACGAAACAAAAAGAAGAAGACGTtaaacgaagaagaagaagcagGTG
ACGTACGTCATTTCGAAATCAATTACGTTAAACAGTTCCAAAGCTTCAAA
AATAATAAACTTAAACTACACGAGGGACCGTCCTCGTCATTAGAGAAAGC
ACGAAATAAAGGGAAACTTCACGAAGCAATGCTGGATCGAAGGGAGAAAA
TGAAAGCGGATCGGTATTGCAAATAATTTGTGGATGtggatttgaaatat
tttctattgCCGATATGAGAGACAGTTATTTCAGAGTGAACCTTGTGCTT
CGAATACTCTCGGTGGAGACATTAATGTTGATCTTGGCATTCGCCAGCCG
TCTTTTGATTCAAATGATCAAAGTGTGTTGCTGATAtgaacttttttaaa
gaaattcagCATGGCTGTGACAAGTCTGCAGAGAGTCTCAATAAAAGAAC
TTTTTTATATGGTTTTGTGTTATGAATTATGTAGCTAAAACATACTTTTC
AACCTTTCTAAGACCAATGAGATCAAATTTTAGGCTCTTAAAATATATTT
AGTAGCAATAATTTATTGAAACGAAATCCAGAATCGAAATTATTTCTTTC
GTGTGCACTTAGTTTGATTACCATCATTTGCTCTTTCAATAGCGTGATAA
TACTGATGTC Run BLAST on NCBI transcript from alignment at scaffold_266:202107..216495+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00055928 ID=TCONS_00055928|Name=TCONS_00055928|organism=Clytia hemisphaerica|type=transcript|length=14389bp|location=Sequence derived from alignment at scaffold_266:202107..216495+ (Clytia hemisphaerica)
ataaaagacaaacctccaaaatgtgatcggctattgctcattccgacatt
ttaaattttccgggggttttgctgtttgggtgccgggtgcatactcggcg
ccttgggccccgcagggttgctagtaacggctcgaatttcagtcaggttt
aaaaaaggggtacttttacccatattataataacattttgCCAGTTgggt
ataaaatgttatgaattgcgtgattctggtgtgcggcgatggctcaaggg
atagagcgctggcttccgaatccgaaggtctttctttggtggtggttcga
atcccactcggtgcgaaaattagacNNctcagaaactcagacagtcagaa
aagagaaagacggGATCAGAGATAAGGATCACATTTCGGAGGTTTGTATC
TTACGTTTTCCAAAGTCGAAAAGTCAAAGTTACCAGATTACATTCCAATA
TTCCACTTTATAAAGGGTATTCTTTTTCGATATAATTCATTGACTGGCCt
tttttcattacttttgatcaCATATGCATTTTCGAATTACACCAGAATAC
TAATTGGGAATATGTGGGGTTTTTTGTACCCACAAGCAGttgtcagtcag
gcacatcctggcaaatgaacggggtgagcatttgcatggggtattcatCA
CCCAGTGTAAAATGAGATAgcacgtctcaggctaaaagcgtgaaaatgaa
taaaaatgaacttcacactgaaaaagggaaaaaaggaagaaaactgggaa
ctttattttttcgttaaaagtttcttcaatctttcgaagacaaaattgac
ccatggaaaaacaagccgtatatgtataaaagttgcgaagcgatccagag
cgtccctcaattcgcaagttgcaagcaaaacattttagACACACAAACAC
TGTATATTCAACATCATTTTTGCAGTTTTCCTTTACATTCGCGAATATCC
tatcatttgcaaattttttatagtccctctctataaagcttcaaccgttc
tatttttcattttctaaaataaatagcaaaaagtttaaagaaacaacaaa
ataagaagtaagatgaaaacactaacAAACTCGGGGCATTttgaatttat
aaaataaaaacaaactgtacccttataatcataaaggttggtgagtccag
tcaaaacacagatttgatctgtagcgtcacgcttcacctttacaaaaagg
aggatatcataaaatgaaccaaggaaaatttcataatttgaaaaaaaaga
gtcATTTTGCATATAACTAATAATGTTAAATAAGGATATAATTTCCAACA
AATTGCAAGgagggaaaaaaatcttttgggaaacatttttgtaatctgaa
agaatgcccAAAGGGAAAAAAAACGTATGCGGAAGGAAACTTCAAGgcga
caacaaaagttttccatatgAGACACACgtgtgctaggtgcggcgcctag
aagtttaacgcggcctcttagcgcctagagcgcaTGCTTGCAATAAACAA
TAAGGACGGGGAAACCATGTCGACTAAGcgcacaaattatttttatcacg
tgacttgaagcgtaattgcctaataaagttgtaaaattttaacgaTGGat
acgagaaagttacgaggaagtttggaTGCGTTTCAtgtgttgtgtaaaat
tgcttataatttggctgctttttttttaattgaatggATTGCAATgctta
ctgaacttctagtttgatggatgaacttgtttgataagaatgaggaccct
gccgacgcaccggacttaacgaacactgGACCCCGAAAGTCCGGTgtata
atgataattttttttaccactggacaatctctacatcggacttaaggaag
tcagATGTCCGGTGTCAGAgttggatatttttttccaccggacaatcaaa
acaccggacctGACCAGTCCGGTGGGTCCGgcgtttcttaattttttgtt
tcataaatgtccggcgtccaaaattccctgtatgcaacaccggactgaca
ccggacttattgcgtcagGTGTAACGAAAGGTTACCTTTTGCCACCAGAC
AAATACACAGGACAGTTCGGTGCGTCGGCAggtgataccaagaatttcaa
tcTTAATCATAACCTGGCAGCTCAAAATATGGCAATAATGGGTATGTTTC
TAACGGGGCATCAGAGAACGCCATAGAAATAAATAAGTGTTTCATCACAA
TTTTAACTGGATCATTTTCAGTACTTTGACAAACAAACTTCCGAAAGGCA
TCACTGAATATAATACAATGCTTGaataacagaattgaaaaaacacACAT
TTCGACCAAAATTGGTAAGCCCTGTTGGACAAATTATGTCTGGAGAATCT
GACATATATTTTActaaaataatcaattttgcaGTACAGTAAACACGGCt
agcaaaaaataattaattcggTTGAATGGCAAACAAAAGTTGCTTCAATA
TACGGTATCTTTTAAACAGAAGGGCAAGCAAGGAGGATATACTCGAAGAC
CAAAACCCAAACAATAACCAAGTACAATAACAGGCCAGTGCCTTCTTTCT
TTCAGTTCTTTGCTGTcgatttgattgaaatgaaaGTCGAAACCAAACCA
ACAACCAAAAAAGAACGATGCCAATCAAGGATCGAAGCCAAGAAAAACAG
GACAAATTATAGTAAATTGTAATGATGATAACAGAAAGTAATGACTCAAT
AAAAATTCAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNAAAGAGCGAACCGAAAGAGTTCAGCGAACTAAAAG
AGCGAATATCATGAAAAAAGAGCGCACAAAAAGAGCACTTATGGCAGCTA
TGGCGTTCCATACTTTACACTTTGTACTTCCGTCCGttttgtttggtttg
ggaacgtgAACTTTAccgatgtctaaacttttcaatatatctccagaagt
accgtaacttggtctaatgtcgacatcccttctctaattccgacaccctt
tttcagcttttatcagctgaaattgatagaaaggttgaatgtgtttttct
ttgattaatggtcagagaggaataattctttttcaatcagtgattcaagc
tttcatattattcctgtctctaaagtaAAGGAGGGTGTCCGAAGGTAGCT
CAAGGTAgacaagggatgtcgatattagaccaacttacagtcaggcacat
cctggcaaatgaacggggtgagcatttgcatggggtattcgtcacccagt
gtaaatgagataggacgtctcaggctaaaagcgtgaNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNtttcttcaatcttcgaagacaaaattgacccatggaaaaaaaatttc
atctatgcagttctttgaaatgaagcaaaatatttccaacccggttcaat
taaacttggtattcggcgctattacgtcactttcgttttcaaccccgttc
atttgccaatggtcgcaagtgaaaaataccccgttcatttgccaggattt
tttgaaatgctgTAAAAAATTCCAAGTTCCTAAATacttttactatgttc
tgttaaaaaatcataaccatcagtgaaATACTCATTCATCTATATATTTA
AGATCGAAGACAAAAATGTGCAAAGAAAAACAAGCCTTGAGCACAAAAGA
TACGGCTAGTTCAAAAcgcaggttcaggtttcagggttAAAACGGAATAA
TTGCCAGACTAGATATATCATTTCGACTTGAAGTTTGCAGaccagataaa
aaaaaattgttatttatttttctcttttctgtgtatgttaaatttttttt
tctaacatGTATATAGATTTGTTCTGTATATATTTCTGGTATACCTCTTG
TGGGTAATAAAATAGAAAGATTAATATAAATACTCATTGTgagtcatttt
tcttttaacaaaTATTTGCCTTAATTGcttattttattttcccattGTTG
TTGATGTCTCTCGACTggatatatataatttttataagaatacaacgTTT
GAACGGAGAGAATTgtgcattttttaaaacaaatttagaaCCTTCAGCTT
TGAATAGGAAGActtgaaagtttttaaaagattataTTTGTTCCTGGGAT
ACGCCGGGATACACTCTTCTTTCATTATAAGCATATTCAAGCCTAAATTT
AATGGGATTCTATCTAGCTCAGATTCTTACTCGCTCGAAAGTAGACGGTT
CTCATAGCCGAAAATGCTTTGGCTGATTAAGCTTGTGCGTTTTGATCGGC
TAATTTTTGTAATTGTCAATTTGGTGGCaaattcaaatctttcaaagAAA
CCATCATACCATTTTATTCTCATATGAGCTTTGTGAAATGGGAAAGTTAT
GGATCCAGGTTACTTCAATTGGGATGtttgaaataaatgtatttttgttT
AGTTTGCAAGGCAACTCTCAGTAACAAGTAAAATAACtcaaagaatcaaa
tcaattaacttgtgcattttttataagaacggcTCTGCAGGAATTTATAA
AAAGGAAGAGACGAACGACATGTAATTTTACAtgtaaaagtttcttttta
ttaaaaatataaaaacctGTTCATAAATAGATATGTAAAAACTCCTAAAC
AATATAAGCAAAATATAACTCTTTCGTATTAAAATGCgaacaaaaaacaa
ataaagtAAGTATGTTGCCCGACACTTAAATTAATTTTGGGCAATTTTTT
TGAATACCGTACTCTCACCCTAACGGActcgaaaaaattaaaactagaaT
GGCTCGTTCAATTATATTCAAATATATTTGTGGctatttcattttcatat
tcaaaaGTTATGTAATTAGATTATGTAATCTTTTCTCGCTATTGGTTTTG
AATAGAAACGAGAAAACAAACGCACCGTCTGTAAAATGAATATTAAGTCA
GTAAATTGAACacgtttcaaaataaaaacagacaTTTTACTTTGTATGAT
AATTAAATGACTACTAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNttacgtcactttcgttttcaaccccg
ttcatttgccaatggtcgcaagtgaaaaataccccgttcatttgccagga
ttttttgaaatgctgTAAAAAATTCCAAGTTCCTAAATacttttactatg
ttctgttaaaaaatcataaccatcagtgaaATACTCATTCATCTATATAT
TTAAGATCGAAGACAAAAATGTGCAAAGAAAAACAAGCCTTGAGCACAAA
AGATACGGCTAGTTCAAAAcgcaggttcaggtttcagggttAAAACGGAA
TAATTGCCAGACTAGATATATCATTTCGACTTGAAGTTTGCAGaccagat
aaaaaaaattgttatttatttttctcttttctgtgtatgttaaatttttt
tttctaacatGTATATAGATTTGTTCTGTATATATTTCTGGTATACCTCT
TGTGGGTAATAAAATAGAAAGATTAATATAAATACTCATTGTgagtcatt
tttcttttaacaaaTATTTGCCTTAATTGcttattttattttcccattGT
GGTTGATGTCTCTCGACTGGATATACTTTTTATAAGAGTACAACGTTTGA
ACGGAGAGAATTGtgtatcttttttataaaaatttcacACTTTCGCACGT
GTATACAGAAAATTCGAATAATCAAATTGATGGCTCACGTGGctatttca
ttttcatattcaaaaGTTATGTAATTAGATTATGTAATCTTTTCTCGCTA
TTCGTTTTGAAATGAGAAAACAAAACGCACCGTCTGTAAAATGAATATTA
AGTCAGTAAATTGAATgcgtttcaaaataaaaacaggcATTTTACTTTGT
ATGATCATTCAATGACTACTAACAATTATAGAATAATTTATATATTGTCA
AAACCGCAAAGCTCCACTCTAATCGTtgggatattttatttttgaaattt
ccatcaaaaaagatttaacctgtaacctgaacctgtaacctgaaacctga
acctgcgtttcgaacttgccgcaaaaaatgcttttgtaattaacactttt
ttccaccgttcatttgttcttaaattgttcttatgttttggcgattttga
gccttattgATCTTGTaacattgttcttatattaaaaaagtgtaatttta
GGATTCGGATCTATTTTAATTATAAGGTCTGTAAACTTCAGCTGTAACTA
ATTGTCAATAACCAGATTCTGGCCTGTCTCGGTGGCACAATCAGTTAGGA
GGTGTGTTGGGTTTATAAACCAAGAAGGTTGCTTGCGTATTGGCCATTTG
GTATGGCTCTTTAAAGGGCGCTTTGATCTTGAGGTGCGCGAGTCTCATGC
TCAATGGGTAACATACCTTGTATAATTCTGAtatagcaactatctggtcc
AAAAATTAGTTAGAGTGATTTTTTAAGCAGGATACTCAGAAGGTTTTACA
TATTAACATTTAAACAACCAGATACCTATCACCGAATAGTTGTTTAGGAG
AAAGCAACAgtagtcttttgaataactaataaCTCCAGCATAATTTAATG
ATAACATTGtattattgatttgtcttttaaaACAAAGCTGTTACCTAGGG
ACAAGATAAATTATCCCGTTTGTAccggctgagggaaagtaatgtatgct
GGAGTAATGAGTTATTCAAAAGAGTGTCGCGTTCTTCCAAACAACTATTA
GACAAGATATGCCAGTATCACACAAAGTTACGGTAACTGTACTGTAAGTA
GCCATCATTATAACCATTAGCTTTTTTTTGTATTAACTGATATTTAATGT
AAGCGCCTCGCTACTATTTGGTGGTCAAAATAGCAACAGATCTGCtttat
tcttaaaatgttcaatCTTTTTTTGGTGTGTTCATAATTCTGCCATCCGC
AAATGGaaagtttccaattttttgcacaattgtCATATTTGGTATACCAA
ATCTATTCGTGAATGTGAATCATTGGAGAGAACCtacacttttaaatttt
ttttcctagttatgaattttttcttttgctaatcaggatgTCATGATGtc
atagacctgagaaatacacttctataaataaataaaaaaaaagatagaaa
aaataaaaaaatgttaaatgatTGAAAACTGCAGCATCAAATCAATGATA
AGAAAAATATTAGTGCAATTTTACATAATTTGTTACTCAATAAACTGTTG
CATTATTTTAAACAAATAAAGACNaaaaaaaaagataaaaaaaataaaaa
aatgttaaatgatTAAAAACTGCAGCATCAAATCAATGATAAGAAAAATA
TTAGTGCAATTTTACATAATTTGTTACTCAATAAACTGTTGCATTATTTT
AAACAGATAAAGACACATTACAGTAATCATAatttttatcataattatca
atTATTCAATATGACATCCTGATTAGCacatgagatttttttctagtCTT
TGAAATAATATTATTACCTTACTCTTAAGTGCCAGTTAAACAGGGGGGTT
CGATTAaacagggggttggaaaattttcgaaattttaataaacaggggga
cCTAAGGGGTTCGagattgtacttctgaaaacccaaaaaataaggtaaat
ataggctaaaatcaggctttttggagcaaaataaggcgACTTCTTCTTGc
taaatgaaaatattcttaaaaattaataaacggggggggtcctaataagg
tctggggggttggaaaattttcgaataaTATGCatgttcaatttttaaat
ttttaaatatgtttCTGAACTAATATGACCAATGAAATTGAGCCATATGT
TATGAAAACAATTTCAGGAcgggattttttctttttactttaagAAACTT
TTACATGGAAACCTTTTTGCTGAAGAACAAATCTGCAAAATGATGCTAAA
TTCACTTTTGCCTAGGAATCTCAACACAATATATAAATAATTTCTATGAA
GGATGCAATTTTCAATGTCATTCATTATGATAACTCCCATCAAATCAAAC
AATACCACGAAATCTcccattgtatatttttatatgtTTAGATGTCAGAA
TATGGGCAGGTGAAACttggaaaattgaaattgaaaggagaagggaaaag
taaaaagaaaagtaagaaaaataaacgaaaaCATGATGAAGAAGGAGGCG
AATCTTCATCAAGTACGAAGGCTTGGAATGAGGAGACCAAAAAGTATCAT
GGCTGGTGGCCCTTAAAGACTTTTGAGGATCTTGGTTGTGGTATTGTAGC
TGTACAGACAAGTTTCAAGAACTCGTATATTTTTGCAGTAGACAATGGAA
CTTTGAGATTAGGATCTGAGCATGATGATCATTTAGAAGCCATACCAATG
GAAGAAGAAATCTTCACTTTGATCAAAATCTCTGAAAATAAAATTGCCTT
CAAATCAGGATAtggtaattattattatttttttttttgctgacgtcagg
gAGGCAATTTTTTGAAGGAGGAGCTGTTTTGATTATAGTGACAACTAAAA
GATATAAGTAAACGGATACAGGTCTTGAGAATTTCGGTTGGTAATAGGTC
ATTGCAAGCCTGTTGTTAGATCTTCTGAAGAAAAGGATTTGAATTGTTTA
TAATTATTAGGATTATCGGTAAAATAaataggttttatttttatcattct
atTGTCTAAGTTGAATTTTTGATTGTTACTGTGCATTTATATATTTTAGC
TAAGTGTGAATTATCCACATGGACCATGAATATTTCTTCcaaattcaacc
aaaatttttaCGAGATCTTATCTTTAATGTTCTTTAGTTGTgatttattt
tctgtttttgtttaatTTGGGTGTATGGATGATTGCTGTGACAAATTCAA
CCTTTGGGAAGTTTGATGTctaaaatatgtgtctgatggccgaattttct
tataatcaatattttaaaatgatGTGCTTGGACTTACTTTTCCAGGTAAA
TACGTATCAGTGAACGCTCGAGGGGATGTTATGGCTCGTTCAGAAGCAGT
TGGACCTCAAGAACAAATAGAGGTTGTGATAGAGAATGAGAAAATCGCAT
TACAAGGGCACAACGGCTATTTCATTACTATTAATGACGAAGGAGACTTC
AAAGCTCTCAGTCGAACCGCCaaagataaagaaattttcGTCTTGAGATC
AAACGTTTCACGAAAGTACGGGTttccttatttttactttttttttaatt
ctaaagAGTTTGTTATTATCCTTGAACGGCTTTGTTGCTTGCTACAATAG
TATAATCTTGTTTTACGAGAGCTTATCTTTAATGTTCTTTAACCATcatt
tattttctgtttttgtttaatTTGGGAGTATGGATGATTGCTGTGACGAA
TTCACTAGCTACCTGTTAGTTATATTAGGGAAAAGCTGGCGATCTTGTTG
TTTCTAACTATCTCTACATGCGAGactttgggacaagctggagtttttac
aagctcttatttgatttggttggttgttaagatgtaataaaagaatctta
ttactttttctaaagaacgcgtcatctctatcactttaaatgaccaatta
gtgaagtatcttgtaaaaactccaaggcatctcgaGACTTTACCGCAAAC
TAACGCcaacaaactttctttcctatacaaacatttttgattaatttctt
taactcgaacctctataactcgaatgtctcattatttttttattttattt
attttatagcaatatatttcgcaggtctattgacctctatgaccTCTTTG
ACCtcattaactcgaacaagttttatggtccctcaGTTAACAGCGCCTTA
TAAACTCAATTTTCTTAATTTGTATTCACCGTGCGTGCTCGAGTTATGAC
GAGTAATGAGACTTCACtgtatttcatttttgtttcaGCAAAAAGAAGAA
GACGTtaaacgaagaagaagaagcagGTGACGTACGTCATTTCGAAATCA
ATTACGTTAAACAGTTCCAAAGCTTCAAAAATAATAAACTTAAACTACAC
GAGGGACCGTCCTCGTCATTAGAGAAAGCACGAAATAAAGGGAAACTTCA
CGAAGCAATGCTGGATCGAAGGGAGAAAATGAAAGCGGATCGGTATTGCA
AATAATTTGTGGATGtggatttgaaatattttctattgCCGATATGAGAG
ACAGTTATTTCAGAGTGAACCTTGTGCTTCGAATACTCTCGGTGGAGACA
TTAATGTTGATCTTGGCATTCGCCAGCCGTCTTTTGATTCAAATGATCAA
AGTGTGTTGCTGATAtgaacttttttaaagaaattcagCATGGCTGTGAC
AAGTCTGCAGAGAGTCTCAATAAAAGAACTTTTTTATATGGTTTTGTGTT
ATGAATTATGTAGCTAAAACATACTTTTCAACCTTTCTAAGACCAATGAG
ATCAAATTTTAGGCTCTTAAAATATATTTAGTAGCAATAATTTATTGAAA
CGAAATCCAGAATCGAAATTATTTCTTTCGTGTGCACTTAGTTTGATTAC
CATCATTTGCTCTTTCAATAGCGTGATAATACTGATGTC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00055928-exon-scaffold_266-1491911889:202107..202572 | TCONS_00055928-exon-scaffold_266-1491911889:202107..202572 | Clytia hemisphaerica | exon |
| TCONS_00055928-exon-scaffold_266-1510915933:202107..202572 | TCONS_00055928-exon-scaffold_266-1510915933:202107..202572 | Clytia hemisphaerica | exon |
| TCONS_00055928-exon-scaffold_266-1575043694:202107..202572 | TCONS_00055928-exon-scaffold_266-1575043694:202107..202572 | Clytia hemisphaerica | exon |
| TCONS_00055928-exon-scaffold_266-1491911889:213998..214370 | TCONS_00055928-exon-scaffold_266-1491911889:213998..214370 | Clytia hemisphaerica | exon |
| TCONS_00055928-exon-scaffold_266-1510915933:213998..214370 | TCONS_00055928-exon-scaffold_266-1510915933:213998..214370 | Clytia hemisphaerica | exon |
| TCONS_00055928-exon-scaffold_266-1575043694:213998..214370 | TCONS_00055928-exon-scaffold_266-1575043694:213998..214370 | Clytia hemisphaerica | exon |
| TCONS_00055928-exon-scaffold_266-1491911889:214902..215121 | TCONS_00055928-exon-scaffold_266-1491911889:214902..215121 | Clytia hemisphaerica | exon |
| TCONS_00055928-exon-scaffold_266-1510915933:214902..215121 | TCONS_00055928-exon-scaffold_266-1510915933:214902..215121 | Clytia hemisphaerica | exon |
| TCONS_00055928-exon-scaffold_266-1575043694:214902..215121 | TCONS_00055928-exon-scaffold_266-1575043694:214902..215121 | Clytia hemisphaerica | exon |
| TCONS_00055928-exon-scaffold_266-1491911889:215845..216495 | TCONS_00055928-exon-scaffold_266-1491911889:215845..216495 | Clytia hemisphaerica | exon |
| TCONS_00055928-exon-scaffold_266-1510915933:215845..216495 | TCONS_00055928-exon-scaffold_266-1510915933:215845..216495 | Clytia hemisphaerica | exon |
| TCONS_00055928-exon-scaffold_266-1575043694:215845..216495 | TCONS_00055928-exon-scaffold_266-1575043694:215845..216495 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_266 | supercontig | scaffold_266:202107..216495 + |
Blast
BLAST of TCONS_00055928 vs. Swiss-Prot (Human)
Match: FRG1 (Protein FRG1 OS=Homo sapiens GN=FRG1 PE=1 SV=1) HSP 1 Score: 187.193 bits (474), Expect = 3.247e-54 Identity = 102/215 (47.44%), Postives = 145/215 (67.44%), Query Frame = 2
Query: 629 WWPLKTFEDLGCGIVAVQTSFKNSYIFAVDNGTLRLGSEHDDHLEAIPMEEEIFTLIKISENKIAFKSGYGKYVSVNARGDVMARSEAVGPQEQIEVVIENEKIALQGHNGYFITINDEGDFKALSRTAKDKEIFVLRSNVSRXXXXXXXXXXXXAGDVRHFEINYVKQFQSFKNNKLKLHEGPSSSLEKARNKGKLHEAMLDRREKMKADRYCK 1273
WW + F ++ G +A++ K +YI A+DNG LG+ H + E P E FT +K+S+++IA KSGYGKY+ +N+ G V+ RS+A+GP+EQ E V +N K+AL N FI N+ GD +A S+TA ++E+ +RS R KKK EE+ G+V+ EINYVK+FQSF+++KLK+ + S L+KAR G LHE +LDRR K+KADRYCK
Sbjct: 47 WWTVTNFGEIS-GTIAIEMD-KGTYIHALDNGLFTLGAPHKEVDEG-PSPPEQFTAVKLSDSRIALKSGYGKYLGINSDGLVVGRSDAIGPREQWEPVFQNGKMALLASNSCFIRCNEAGDIEAKSKTAGEEEMIKIRSCAERETKKKDDIPEEDKGNVKQCEINYVKKFQSFQDHKLKISKEDSKILKKARKDGFLHETLLDRRAKLKADRYCK 258
The following BLAST results are available for this feature:
|
