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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00055988 ID=TCONS_00055988|Name=TCONS_00055988|organism=Clytia hemisphaerica|type=transcript|length=5294bp
CACAGATCGACTTGACCCCCCTCCCCCGTTCGTTTTCGTTCGTTTTTTtg
ctgaccccctccccccctcggcgacgaacgtactttttgaatggccccaT
AGGGTGCGctctcgtcgggattttttgcgcggaatgagggagaatttaca
aaaatgaacttcaatgcattagtacttaccttaaatcatccaaatctatt
cattcttttttaaaatcaatcaggaattatcagggaaacaagtaaaaaaa
actgtatCCAGGTATCCATATTTTTCCatagatattcatgttttttgacg
tcaaggtgaaaacgcgatttagcgctgaccacggcaccggaaaattctcg
acccacattgaaacaaatggctctcgctattgagctggttcctCTTTTCA
ATCGCGTTTTTTTTAGCGAACCTTGTACTTTTGTATGCAATTTGTGTTTT
GACTTGTTGCGTACCGACAACGTTTTTTAAAGTCTTATTTAAGGATTTTA
CCAGATTTACCtgatgatttttttgtgttttgaaaatggaataactttgg
gaatacttaaccaattctaataaatgacccctcatttttctcacaaaggt
aaggactttcaaataaaattagtttggtttctaaaaattgaggggaaaat
tttggcctgtccaccctaccTTTGAAAACTTGTGACCTCCGAtcccaaaa
tggcgcatgtaatgataaacaaagtaaaaatgctgcgaatgcgctagaat
tTGCTCGCTAAAAATCGacacaataaaatttttgaatgaaggATAGGTCA
TGgcagaaaaagtccgacaaatttaccgactcaccgactcaattctactc
aattttcgagagtcggtcgggcgatgcgaaacaaagatatttgtgattac
CGCCTTAGCTATTctagcagttacatcaatatgccttcttacgcagtcat
caaaaaattgttttatccGCGTCACttgcccgcatcaaattttacgctga
ttttccggtgcggagttGTGGAAAAAAACCTgagaaaagcaatttgttct
tttaaagtatagcttttttctcaattgctctgacgaccatcgaaaaattg
ttattGCTCGtgttaccacccgcccctgagttactgacatgattaaaatt
ttcaaacgtCTATTATTAcgcattgagaaaaaaactttcaataatataTA
GCTCGTTTTGATCGTCTTgttctaaattttctaaatgtaacaaaaaatgt
GTGACAAAAATTTGGGCTGACATCCCCTTTAATGAAGGTTTTTGTTCAGT
GATTAACAAAGCTTCTGTTAATTCTCTAGTaattttaattagcttgtttc
tgtaaattttgaatttagaatCCTCATCCTGAttagatttttggacctac
cctggtggggtggaggtcctataaattaacctgtgttcgttcgtttgtct
gttaccaacttGTCTCAGGATTGATttataggaatcttttgatttttggt
acaaaggtgcaaaatggtggtgggcaAAATGTGAGGAagcatgattttcg
aaaaaaaattattttgggcaaatttgggccaaaaaaaagctaaaaaacag
gttttttcgactttgtgaaaaattggatcattaattttttgcatgaaagt
agggtaccatcataggtaaaagatggctcaagcagattttagcaaaacaa
ttttgttggctcgaaaacgcatgtttatatataagaatcactattaatca
CACCAATGTTCTTAggcaaattactcaattttttatgggatagatgtttt
tttgctcacgagcgCTTTCTTTTGATGAAtttgtgtgtttagacatgaaa
ttttggttgcttgacgtgttttcattgaaaaactggccaaatttgatatt
tttttataagcacattatcaattacttaggtattagcttttctcaagatt
ggctttttcattttttatgattttttgcacaaagatgcataaatataaac
cctcaaatgtgatgGAGCTTGatcttcgaaaaaaaatgtttttgggcaaa
tttgggccaaaaaacagctaaaaaacaggttttttggactttgtgaaaaa
ttggattattaattttttctgatttttttaatgaaaataggtaccatcat
aggtaaaagagggctcaagcagatttttgcaaaaaaaatttgttggctca
aaaaacgcatgtttatctataagaatcactattgataagcatacatcaat
gttcttagtcaaattactcaattcctttatgagatagatgttttattCGC
Tcgcaaagtcttgaatatgacagaatatttcaagagcatgaaatgttggt
ttctaaacgtttttttttagtaagaaacaaacgactaattttaaaagatc
gtcactatttgtgttctgaatgattgtttaacggtcctgctcacgtagat
atcaataatatatgtgttaaatgcataaccaggtaggtccaggtaggtcc
ataaaaataTCACTTGTTACTCTGATGATGATCTCTTGTGAGTGAGGTCG
AATATAtggtttttaataaaaaagaagaatgcataactaaacatttttca
gtaagtactaatgcattaATGTTCATTTTGGTGAATTCTTCCTTGTTCCG
CGCCAAAAATCCCAACGAGTGTGCACCCTTgtaaggaaagaaagttttaa
aaccaTTTCTCCTTTCTATCCACCATACAGTATAGCCAGACCTGCCAACT
TGAGATGTCTGTTTAGCGTGAGATGAAGGTTTCCAAATGAAatccaaagt
ttttcaaaaatcagaaatCAGAAACTAAAATTACAGAAATGTAGGCAAAC
TTCTTTCCAAAAACCGGGATATCAGGGAAACATTTTTCCCGAAATcgaat
ttatttctttttgatttttttgattcatGATTCTTTTAATCTGAGCCAAT
ATATTGACTCGTGAAAATTCTCACTCGTGATTTGTTAATTTAAATCCTTT
TATTTATAATAAACCCTTTGATATATATTACTTCCCACAAAGATGACTTA
CCTTCTTGACTATACTTTCCTTTAGACTAAATTAACAAAGCCCCAGTTTA
CATgggaatatttttgtcaatgtGTTACGTGTTAACTAATGAAAGCATTG
TATTGTTAAAATGGGAAGGAGAGAAGAGTTTAGAGCCTTAGAGTTACACT
GCCTCATCTCAAGAAAAATTGATAGTTTCAAGTTGTAACTCAGATAATGG
TTTGAAATTATTACTATGATGTCAAAAAGACTAGTCTTTGGCTTATCAAA
GAGATGTTATAATGCCCATATTAATAAGAGAAATCTACTGCGTAAGCAAT
ACTTGCAAAGTAGCAATCTACAGGTGTCTAAATATCAGTCTCTGACCACT
GACGCTGATTCAAACTTGAAACTTAATAttgatggaacagcaattacaCA
GCTTCAGAAAACTTTAGAAGACTCTCAATTTTTACGAGTGTTGGTTGAAG
GTGGAGGCTGCTCAGGATTTCAATACAAGTTTGAAGTTGATTCAGAAATT
GACGATGAAGAAGATTTGATATTTGAAAATGATGGTGTCAAAGTTGTATC
TGATATTGAATCAGTGAAAATCTTGAATGGAAGTAAAGTTGAATATCATG
TTGATCTGATACGAGCTGGTTTTCGTATCACTGATATTCCAATGGCTGAA
AAAGGCTGCTCTTGTGGTGTTTCATTTTCTGTAAAACTGTaaacttattt
tttaataaattttcctttgagaaTTATGTGTTTTGTATATTTGTAATGAA
TTATAATCTATGACTCTGTATCAAAAACCTCAATCCCTGAGATTCTACCC
TTCCAATATTGTTTATGAGCAATTGTTGTAAAATTGTTCAAGAGGGACCA
TTTTACCCACTACAAAAACCTTGACAACTTCTAAATTTAATAAATAAGAG
GTTCAGATATAGTCAAAGAACTTGAATAAGCATTTTAATTTCTATTTTCC
aaacagatttttcaaataagTTATGGTCAGCTCTTTTTAGtgttattgaa
gaaaaaaatattataatcataGGTGTGTCACCTGGTGTCCCATAAATAAT
ATGACTTCATAGAAATATTCAAGCCCCCTAAAACATGACCCTAAATATGC
ACTCTCACTCTCAGAGAGAAAGAGAGTACTTTGCTGTAGAATATGTATTT
ATAACCTCGGGTGGGTTTCTTTTCATTACACATACTTTGATTTTGAAGGT
TAAGAAACTGATTTTctagttttttgaaagtgttcTAAATTTAGTCTAGG
CTTTTCATCTTAGAATTTTTGTCCTTTTATTTTTAGTGTTTGCTTTTTGG
AATATAATGACAACACCTAGGAAAGAAATTAAAACACCAATCAAAGCAAG
AATTTTATCAGAGGGCACTCCCTCTCCGAAAACCCCAAGGACACCAAGAA
CACCAACAACAGTCGATAGCAGCATCAAACGCAGATTTTCAGACATTCTT
GTCAATCTACACAAATGTGTTCAAATTTGGGAAACTGATAATCAAGCCAG
TTTTAACACTGCAAATACTTTGATAAACCTTTACTCGCAATGGAAAACAG
TGAAAGACAGCACACAACTGGATGATATTGTTTCAAAGGAatgtaaagaa
aaatatcagctgaaattgattaAAACACGAGAAGATCTTTTAAAACAGCT
AAAAGTGCACCAAtccaaacttgaaaaattaattaccaAAATGAATGGGT
TTAAAGAAAACATCAGAGCCATATATTTTCTTGGTATGGTTTCTAGTGAT
GTAGAGTCTTCTGTTTGTCTGGATGAGAGTGCTGCTCAAGATTGTGATTT
TAATTTAGAACCTGTTATCTTCTCCACATGGACTTCAGAAATGTTTTTAC
ATAAAATCGAGGAAATGTTAAGTTGTTATACAAAAGAATAtatacaaaaa
ttgaaattttatgatttgTTTCTGAAATTCAGAGTAAATGAGAAAGGCGG
AGATGATACAAGCAAGCTATCGCAGTGCGTCAGCATCTGGTTACACCAGC
CATATCTTGATGACCATTGTAGATTTCTTTTAGAGTGTATGCTTGTTGAG
GCTGAATTGAAATGAtatattgtttgaaaattttatatttttgtaaattg
ttttttattacattttaaaaaaCTCTGAAACTTTATATACTCCCACCCAT
GTCTTTTCTGCACAGCTTAATGTTTCATGAGCAGAATGATTTGTAGCAAT
GAAAAAGTAACGGTGATCAAAAATGATTATAGCTCTTCATGGAG Run BLAST on NCBI protein sequence of TCONS_00055988-protein >TCONS_00055988-protein ID=TCONS_00055988-protein|Name=TCONS_00055988-protein|organism=Clytia hemisphaerica|type=polypeptide|length=252bp
MTTPRKEIKTPIKARILSEGTPSPKTPRTPRTPTTVDSSIKRRFSDILVN
LHKCVQIWETDNQASFNTANTLINLYSQWKTVKDSTQLDDIVSKECKEKY
QLKLIKTREDLLKQLKVHQSKLEKLITKMNGFKENIRAIYFLGMVSSDVE
SSVCLDESAAQDCDFNLEPVIFSTWTSEMFLHKIEEMLSCYTKEYIQKLK
FYDLFLKFRVNEKGGDDTSKLSQCVSIWLHQPYLDDHCRFLLECMLVEAE
LK Run BLAST on NCBI transcript from alignment at scaffold_266:162531..168816- Legend: exonfive_prime_UTRCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00055988 ID=TCONS_00055988|Name=TCONS_00055988|organism=Clytia hemisphaerica|type=transcript|length=6286bp|location=Sequence derived from alignment at scaffold_266:162531..168816- (Clytia hemisphaerica)
CACAGATCGACTTGACCCCCCTCCCCCGTTCGTTTTCGTTCGTTTTTTTG
CTGACCCCCTCCCCCCCTCGGCGACGAACGTACTTTTTGAATGGCCCCAT
AGGGTGCGCTCTCGTCGGGATTTTTTGCGCGGAATGAGGGAGAATTTACA
AAAATGAACTTCAATGCATTAGTACTTACCTTAAATCATCCAAATCTATT
CATTCTTTTTTAAAATCAATCAGGAATTATCAGGGAAACAAGTAAAAAAA
ACTGTATCCAGGTATCCATATTTTTCCATAGATATTCATGTTTTTTGACG
TCAAGGTGAAAACGCGATTTAGCGCTGACCACGGCACCGGAAAATTCTCG
ACCCACATTGAAACAAATGGCTCTCGCTATTGAGCTGGTTCCTCTTTTCA
ATCGCGTTTTTTTTAGCGAACCTTGTACTTTTGTATGCAATTTGTGTTTT
GACTTGTTGCGTACCGACAACGTTTTTTAAAGTCTTATTTAAGGATTTTA
CCAGATTTACCTGATGATTTTTTTGTGTTTTGAAAATGGAATAACTTTGG
GAATACTTAACCAATTCTAATAAATGACCCCTCATTTTTCTCACAAAGGT
AAGGACTTTCAAATAAAATTAGTTTGGTTTCTAAAAATTGAGGGGAAAAT
TTTGGCCTGTCCACCCTACCTTTGAAAACTTGTGACCTCCGATCCCAAAA
TGGCGCATGTAATGATAAACAAAGTAAAAATGCTGCGAATGCGCTAGAAT
TTGCTCGCTAAAAATCGACACAATAAAATTTTTGAATGAAGGATAGGTCA
TGGCAGAAAAAGTCCGACAAATTTACCGACTCACCGACTCAATTCTACTC
AATTTTCGAGAGTCGGTCGGGCGATGCGAAACAAAGATATTTGTGATTAC
CGCCTTAGCTATTCTAGCAGTTACATCAATATGCCTTCTTACGCAGTCAT
CAAAAAATTGTTTTATCCGCGTCACTTGCCCGCATCAAATTTTACGCTGA
TTTTCCGGTGCGGAGTTGTGGAAAAAAACCTGAGAAAAGCAATTTGTTCT
TTTAAAGTATAGCTTTTTTCTCAATTGCTCTGACGACCATCGAAAAATTG
TTATTGCTCGTGTTACCACCCGCCCCTGAGTTACTGACATGATTAAAATT
TTCAAACGTCTATTATTACGCATTGAGAAAAAAACTTTCAATAATATATA
GCTCGTTTTGATCGTCTTGTTCTAAATTTTCTAAATGTAACAAAAAATGT
GTGACAAAAATTTGGGCTGACATCCCCTTTAATGAAGGTTTTTGTTCAGT
GATTAACAAAGCTTCTGTTAATTCTCTAGTAATTTTAATTAGCTTGTTTC
TGTAAATTTTGAATTTAGAATCCTCATCCTGATTAGATTTTTGGACCTAC
CCTGGTGGGGTGGAGGTCCTATAAATTAACCTGTGTTCGTTCGTTTGTCT
GTTACCAACTTGTCTCAGGATTGATTTATAGGAATCTTTTGATTTTTGGT
ACAAAGGTGCAAAATGGTGGTGGGCAAAATGTGAGGAAGCATGATTTTCG
AAAAAAAATTATTTTGGGCAAATTTGGGCCAAAAAAAAGCTAAAAAACAG
GTTTTTTCGACTTTGTGAAAAATTGGATCATTAATTTTTTGCATGAAAGT
AGGGTACCATCATAGGTAAAAGATGGCTCAAGCAGATTTTAGCAAAACAA
TTTTGTTGGCTCGAAAACGCATGTTTATATATAAGAATCACTATTAATCA
CACCAATGTTCTTAGGCAAATTACTCAATTTTTTATGGGATAGATGTTTT
TTTGCTCACGAGCGCTTTCTTTTGATGAATTTGTGTGTTTAGACATGAAA
TTTTGGTTGCTTGACGTGTTTTCATTGAAAAACTGGCCAAATTTGATATT
TTTTTATAAGCACATTATCAATTACTTAGGTATTAGCTTTTCTCAAGATT
GGCTTTTTCATTTTTTATGATTTTTTGCACAAAGATGCATAAATATAAAC
CCTCAAATGTGATGGAGCTTGATCTTCGAAAAAAAATGTTTTTGGGCAAA
TTTGGGCCAAAAAACAGCTAAAAAACAGGTTTTTTGGACTTTGTGAAAAA
TTGGATTATTAATTTTTTCTGATTTTTTTAATGAAAATAGGTACCATCAT
AGGTAAAAGAGGGCTCAAGCAGATTTTTGCAAAAAAAATTTGTTGGCTCA
AAAAACGCATGTTTATCTATAAGAATCACTATTGATAAGCATACATCAAT
GTTCTTAGTCAAATTACTCAATTCCTTTATGAGATAGATGTTTTATTCGC
TCGCAAAGTCTTGAATATGACAGAATATTTCAAGAGCATGAAATGTTGGT
TTCTAAACGTTTTTTTTTAGTAAGAAACAAACGACTAATTTTAAAAGATC
GTCACTATTTGTGTTCTGAATGATTGTTTAACGGTCCTGCTCACGTAGAT
ATCAATAATATATGTGTTAAATGCATAACCAGGTAGGTCCAGGTAGGTCC
ATAAAAATATCACTTGTTACTCTGATGATGATCTCTTGTGAGTGAGGTCG
AATATATGGTTTTTAATAAAAAAGAAGAATGCATAACTAAACATTTTTCA
GTAAGTACTAATGCATTAATGTTCATTTTGGTGAATTCTTCCTTGTTCCG
CGCCAAAAATCCCAACGAGTGTGCACCCTTGTAAGGAAAGAAAGTTTTAA
AACCATTTCTCCTTTCTATCCACCATACAGTATAGCCAGACCTGCCAACT
TGAGATGTCTGTTTAGCGTGAGATGAAGGTTTCCAAATGAAATCCAAAGT
TTTTCAAAAATCAGAAATCAGAAACTAAAATTACAGAAATGTAGGCAAAC
TTCTTTCCAAAAACCGGGATATCAGGGAAACATTTTTCCCGAAATCGAAT
TTATTTCTTTTTGATTTTTTTGATTCATGATTCTTTTAATCTGAGCCAAT
ATATTGACTCGTGAAAATTCTCACTCGTGATTTGTTAATTTAAATCCTTT
TATTTATAATAAACCCTTTGATATATATTACTTCCCACAAAGATGACTTA
CCTTCTTGACTATACTTTCCTTTAGACTAAATTAACAAAGCCCCAGTTTA
CATGGGAATATTTTTGTCAATGTGTTACGTGTTAACTAATGAAAGCATTG
TATTGTTAAAATGGGAAGGAGAGAAGAGTTTAGAGCCTTAGAGTTACACT
GCCTCATCTCAAGAAAAATTGATAGTTTCAAGTTGTAACTCAGGTAAGGG
CTTGAGATCTTGTGTTACGGCTTTTAGAAAACTAGATATTTCCTGTGTTT
CAGACGCATGTAAACATGTTTGGGAAATCCAATAAAACTCTTTTCCAATT
ACAGGAGAGCAAAATTCTAAGAAATGTCTGGGGAAATTATGTGTAAACAA
AACTTTCACTATTCGGGTGGTATATATCAACGCTCTGCCCCTTGTGATTA
TGAATTGATGAAGAGAAAAAGCAAATTTTTTTAAACACTTTGCCAATCAG
GAAAGTCAGGAAAACAGTAAAATACTTTCCTAAAGACAAAACTCATAAAT
ATGGTTACTAGGAAAATGACTGACAGATTAGACTTATCCAGGCAACCATT
GGAACTTGCATCACATAAGTGGGGAGACTTATCTTTCTATAAGCCACTTG
TTAATTGTCATATTTTGATAGTGCTATTATAATTCTGTTCCATCTGGAAA
GGCTGGTTTTGATGTTATTTAATGATTTTAGAGAACTCAGAGTGTATATG
ATCAGGCCTTAGGTGCTCTATAAAGAGAGAACTACAATGACCACAAAAAA
GCATGTCTCATGGTGTTTTATTATAATAAAGAATAATTTAACTTAGAATT
TGGGGTACTAGGGTTCAGAGCTGACGGGGGTGCCGCCAGACTTTCGAACT
TTGGACCCTAACCAGGACTAAAAAGGAGAAAATAAAGGTAAATTTTTGGA
ATTTTACGACCCTTAGCGGGACTTTGGAAGTCCAAAAAAGGTACCCTTAA
GGGCGGCACATACTGTACCCTCCTGAAGATTTTAAAGGAATAAAAGATGG
TTGCATGATATCATTTGCCAACTGGAGAATCACTTTTACTTGTGTAGGTG
TTTGGACCACAGATACCTTATGTAAAACACTAGATAGAGCTACTCCATCC
CTCCTTATATATACTTAAAATACTGATTTTAACAGGTAACTTAATTGACT
TATTATAGTTTTATGACATTCTCTTATGATTTTAGATAATGGTTTGAAAT
TATTACTATGATGTCAAAAAGACTAGTCTTTGGCTTATCAAAGAGATGTT
ATAATGCCCATATTAATAAGAGAAATCTACTGCGTAAGCAATACTTGCAA
AGTAGCAATCTACAGGTGTCTAAATATCAGTCTCTGACCACTGACGCTGA
TTCAAACTTGAAACTTAATATTGATGGAACAGCAATTACACAGCTTCAGA
AAACTTTAGAAGACTCTCAATTTTTACGAGTGTTGGTTGAAGGTGGAGGC
TGCTCAGGATTTCAATACAAGTTTGAAGTTGATTCAGAAATTGACGATGA
AGAAGATTTGATATTTGAAAATGATGGTGTCAAAGTTGTATCTGATATTG
AATCAGTGAAAATCTTGAATGGAAGTAAAGTTGAATATCATGTTGATCTG
ATACGAGCTGGTTTTCGTATCACTGATATTCCAATGGCTGAAAAAGGCTG
CTCTTGTGGTGTTTCATTTTCTGTAAAACTGTAAACTTATTTTTTAATAA
ATTTTCCTTTGAGAATTATGTGTTTTGTATATTTGTAATGAATTATAATC
TATGACTCTGTATCAAAAACCTCAATCCCTGAGATTCTACCCTTCCAATA
TTGTTTATGAGCAATTGTTGTAAAATTGTTCAAGAGGGACCATTTTACCC
ACTACAAAAACCTTGACAACTTCTAAATTTAATAAATAAGAGGTTCAGAT
ATAGTCAAAGAACTTGAATAAGCATTTTAATTTCTATTTTCCAAACAGAT
TTTTCAAATAAGTTATGGTCAGCTCTTTTTAGTGTTATTGAAGAAAAAAA
TATTATAATCATAGGTGTGTCACCTGGTGTCCCATAAATAATATGACTTC
ATAGAAATATTCAAGCCCCCTAAAACATGACCCTAAATATGCACTCTCAC
TCTCAGAGAGAAAGAGAGTACTTTGCTGTAGAATATGTATTTATAACCTC
GGGTGGGTTTCTTTTCATTACACATACTTTGATTTTGAAGGTTAAGAAAC
TGATTTTCTAGTTTTTTGAAAGTGTTCTAAATTTAGTCTAGGCTTTTCAT
CTTAGAATTTTTGTCCTTTTATTTTTAGTGTTTGCTTTTTGGAATATAAT
GACAACACCTAGGAAAGAAATTAAAACACCAATCAAAGCAAGAATTTTAT
CAGAGGGCACTCCCTCTCCGAAAACCCCAAGGACACCAAGAACACCAACA
ACAGTCGATAGCAGCATCAAACGCAGATTTTCAGACATTCTTGTCAATCT
ACACAAATGTGTTCAAATTTGGGAAACTGATAATCAAGCCAGTTTTAACA
CTGCAAATACTTTGATAAACCTTTACTCGCAATGGAAAACAGTGAAAGAC
AGCACACAACTGGATGATATTGTTTCAAAGGAATGTAAAGAAAAATATCA
GCTGAAATTGATTAAAACACGAGAAGATCTTTTAAAACAGCTAAAAGTGC
ACCAATCCAAACTTGAAAAATTAATTACCAAAATGAATGGGTTTAAAGAA
AACATCAGAGCCATATATTTTCTTGGTATGGTTTCTAGTGATGTAGAGTC
TTCTGTTTGTCTGGATGAGAGTGCTGCTCAAGATTGTGATTTTAATTTAG
AACCTGTTATCTTCTCCACATGGACTTCAGAAATGTTTTTACATAAAATC
GAGGAAATGTTAAGTTGTTATACAAAAGAATATATACAAAAATTGAAATT
TTATGATTTGTTTCTGAAATTCAGAGTAAATGAGAAAGGCGGAGATGATA
CAAGCAAGCTATCGCAGTGCGTCAGCATCTGGTTACACCAGCCATATCTT
GATGACCATTGTAGATTTCTTTTAGAGTGTATGCTTGTTGAGGCTGAATT
GAAATGATATATTGTTTGAAAATTTTATATTTTTGTAAATTGTTTTTTAT
TACATTTTAAAAAACTCTGAAACTTTATATACTCCCACCCATGTCTTTTC
TGCACAGCTTAATGTTTCATGAGCAGAATGATTTGTAGCAATGAAAAAGT
AACGGTGATCAAAAATGATTATAGCTCTTCATGGAG Coding sequence (CDS) from alignment at scaffold_266:162531..168816- >TCONS_00055988 ID=TCONS_00055988|Name=TCONS_00055988|organism=Clytia hemisphaerica|type=CDS|length=759bp|location=Sequence derived from alignment at scaffold_266:162531..168816- (Clytia hemisphaerica)
ATGACAACACCTAGGAAAGAAATTAAAACACCAATCAAAGCAAGAATTTT
ATCAGAGGGCACTCCCTCTCCGAAAACCCCAAGGACACCAAGAACACCAA
CAACAGTCGATAGCAGCATCAAACGCAGATTTTCAGACATTCTTGTCAAT
CTACACAAATGTGTTCAAATTTGGGAAACTGATAATCAAGCCAGTTTTAA
CACTGCAAATACTTTGATAAACCTTTACTCGCAATGGAAAACAGTGAAAG
ACAGCACACAACTGGATGATATTGTTTCAAAGGAATGTAAAGAAAAATAT
CAGCTGAAATTGATTAAAACACGAGAAGATCTTTTAAAACAGCTAAAAGT
GCACCAATCCAAACTTGAAAAATTAATTACCAAAATGAATGGGTTTAAAG
AAAACATCAGAGCCATATATTTTCTTGGTATGGTTTCTAGTGATGTAGAG
TCTTCTGTTTGTCTGGATGAGAGTGCTGCTCAAGATTGTGATTTTAATTT
AGAACCTGTTATCTTCTCCACATGGACTTCAGAAATGTTTTTACATAAAA
TCGAGGAAATGTTAAGTTGTTATACAAAAGAATATATACAAAAATTGAAA
TTTTATGATTTGTTTCTGAAATTCAGAGTAAATGAGAAAGGCGGAGATGA
TACAAGCAAGCTATCGCAGTGCGTCAGCATCTGGTTACACCAGCCATATC
TTGATGACCATTGTAGATTTCTTTTAGAGTGTATGCTTGTTGAGGCTGAA
TTGAAATGA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this transcript:
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00055988-exon-scaffold_266-1575043694:165574..168816 | TCONS_00055988-exon-scaffold_266-1575043694:165574..168816 | Clytia hemisphaerica | exon |
| TCONS_00055988-exon-scaffold_266-1575043694:162531..164581 | TCONS_00055988-exon-scaffold_266-1575043694:162531..164581 | Clytia hemisphaerica | exon |
| TCONS_00055988-exon-scaffold_266-1510915933:165574..168816 | TCONS_00055988-exon-scaffold_266-1510915933:165574..168816 | Clytia hemisphaerica | exon |
| TCONS_00055988-exon-scaffold_266-1510915933:162531..164581 | TCONS_00055988-exon-scaffold_266-1510915933:162531..164581 | Clytia hemisphaerica | exon |
| TCONS_00055988-exon-scaffold_266-1491911889:165574..168816 | TCONS_00055988-exon-scaffold_266-1491911889:165574..168816 | Clytia hemisphaerica | exon |
| TCONS_00055988-exon-scaffold_266-1491911889:162531..164581 | TCONS_00055988-exon-scaffold_266-1491911889:162531..164581 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_266 | supercontig | scaffold_266:162531..168816 - |
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
| Term | Definition |
|---|
| IPR023250 | Cyclin-dep_Kinase_2_interact |
Blast
BLAST of TCONS_00055988 vs. Swiss-Prot (Human)
Match: ISCA2 (Iron-sulfur cluster assembly 2 homolog, mitochondrial OS=Homo sapiens GN=ISCA2 PE=1 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 9.709e-25 Identity = 47/107 (43.93%), Postives = 77/107 (71.96%), Query Frame = 2
Query: 3419 KLNIDGTAITQLQKTLEDSQFLRVLVEGGGCSGFQYKFEVDSEIDDEEDLIFENDGVKVVSDIESVKILNGSKVEYHVDLIRAGFRITDIPMAEKGCSCGVSFSVKL 3739
++ + + + +L + E S+FLR+ VEGGGCSGFQYKF +D+ I+ +D +FE G +VV D +S+ + G++V++ +LIR+ F++ + P A++GCSCG SFS+KL
Sbjct: 49 QIRLTDSCVQRLLEITEGSEFLRLQVEGGGCSGFQYKFSLDTVIN-PDDRVFEQGGARVVVDSDSLAFVKGAQVDFSQELIRSSFQVLNNPQAQQGCSCGSSFSIKL 154
The following BLAST results are available for this feature:
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