TCONS_00056030 (transcript) - C. hemisphaerica

Overview
NameTCONS_00056030
Unique NameTCONS_00056030
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2083

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00056030 ID=TCONS_00056030|Name=TCONS_00056030|organism=Clytia hemisphaerica|type=transcript|length=2083bp
GAGCAAAGTTATATTTAGTAATCTATTATATTGTCAGCTTTCAAAAATCC
TTCACCAAACTCATAAGCATGCTGAACAATTCGATCAAAAGCAAATGATA
GTAAACTTTGAATGTCGTCTCGCGAAATGTTTGGTGGCAAAAATGCAGAC
CAGATGAAAGGAAGTGAAAATGTGATCGACACAAGACCAGTTGCAGCAAT
CAAGCTCCTTACTCTTGGAGATTCAGGTGTCGGGAAAACATCCTTGACGA
TCCGATTTGTGTGTGGTGGATTTGAAAATAGATTTATTCCAACAATTGGC
ATGGACTTGCAAGAAAAAATTATGGTATACCATGCGAAAAATTCTGATGG
ATCCAAACAAGCGAGAGGGCAGAGAGTTCATCTTCAACTATGGGATACCG
CCGGCCAAGAAAGGTTCAGAAGCTTAACAACAGCATTCTTTCGTGATGCA
ATGGGATTCTTATTGATGTTTGATTTAACACATGAAGAATCATTTGTCAA
TGTGAGGAGTTGGTTGTCTCAACTGCAAACACATGCATACTGCGAAGACC
CAACTATAAttttgatTGGCAATAAGACTGATTTAGAAGCAGAACGGCAA
GTCGCCGAGAAAGCAGCCAGAGACTTAGCTGACTCTCTAGGGATCAAATA
TTTCGAAACGAGTGCTAAGACTGGTGAAAATGTCAACGAAGCTATCGACG
CTCTCCTAGAACAAGTGATGGAACAGATGGAAAGATGTGTTGACAAAGCC
ACCCTTCCGCCCTCCTTAGCGAATGGCGGTGAGCGAGGTCATAAATTACG
TGAAGTAGACGAAGCACATGATGATAGGAGCGGTGGGTGTGCTTGCTAAG
GGCGTACTGCGACAGGTGATTAATAGGCACATGTAATTCGCAACCTTTTC
AAAATGGAATTATTAGATTTTAACAAATTTCTGTATAATGCAATTTAGAT
GATTATGATATTTCTAATTTAATATCGCGaactttcttaaaaatgaaaga
GGAATTCATCCTAAGAAAATtaatatttatttaaaattcCACTTTAAATT
TGTCCTTCTtccattttgggaaaattaaaaaaacatactaaaaagataaa
atatttttttgtgataaTTAGAGGTATTTTTAGTTTACTGGTagtatttt
tatttatattttattattaatattttttgttgtcTTGTCTTTTATGTATA
CATATTGCATCATTAGAAGTtacattgattgttgatttcttgttgatttt
tctttgtaatttttctcaaaCCAATTTTATTAATGGAAATTAATTTACAA
AAACACTGTCGAAGACACTGGTATTATACGAGATTTGATCATATATACAG
TTATTGCTCAAATCGATCACTCTTGAAGAGGAATCACTAAAATGATTCTC
TTGTAAAGATTGTAAAAAATAGTCTTGGAGTTTGATTAACTCGCGATAAA
TCTTTTAGAATCATCTTTGAATTTGGTTCAGAGAAATTTATTCTGCCAGT
TTTAGTggcataggcgtagcgagataccctgcaaaatttatggatgagag
cagtttttacgacactgtaattattgtctttgttttatcaaaagataatg
aatatgtcataaaagtCTGCAccccctcataaattttgcagggtatctcg
cttcgGCTATGAGTGGGTATGAACTAAGGAGTTCCCTGGTCTGCCTTCAA
CAAAATATTTCCATCTTGAATCTGACAGAACGACTCAAGTGTCCAGTGTA
GTGATTACATtacagtctccataactcgaattcCTCCTtagtgtgttcga
gttatggaggcttAATATTCTCTTGTGTTTACTTTGAATGTGTTCGAATC
CACACTATGTCATATACATTTTCCTTTTCATCGTCGAATAAATAATAGAC
TACAtttgctttattttttatttattgttatATTGGATTTATATTTTGAA
TATAAATTAACAAACTGGAAATTCACATTTGTCTGCTCTTTCATTCCTGA
TTTGGTTATGTTCTCTCAATGATGAACTGGTGCTGTAGCCCGAAAACTAT
GACTTGGTCCAACTCAGctgactttgatttcaa
Run BLAST on NCBI

protein sequence of TCONS_00056030-protein

>TCONS_00056030-protein ID=TCONS_00056030-protein|Name=TCONS_00056030-protein|organism=Clytia hemisphaerica|type=polypeptide|length=245bp
MSSREMFGGKNADQMKGSENVIDTRPVAAIKLLTLGDSGVGKTSLTIRFV
CGGFENRFIPTIGMDLQEKIMVYHAKNSDGSKQARGQRVHLQLWDTAGQE
RFRSLTTAFFRDAMGFLLMFDLTHEESFVNVRSWLSQLQTHAYCEDPTII
LIGNKTDLEAERQVAEKAARDLADSLGIKYFETSAKTGENVNEAIDALLE
QVMEQMERCVDKATLPPSLANGGERGHKLREVDEAHDDRSGGCAC
Run BLAST on NCBI

transcript from alignment at scaffold_266:532853..547089-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00056030 ID=TCONS_00056030|Name=TCONS_00056030|organism=Clytia hemisphaerica|type=transcript|length=14237bp|location=Sequence derived from alignment at scaffold_266:532853..547089- (Clytia hemisphaerica)
GAGCAAAGTTATATTTAGTAATCTATTATATTGTCAGCTTTCAAAAATCC
TTCACCAAACTCATAAGCATGCTGAACAATTCGATCAAAAGCAAATGATA
GTAAACTTTGAATGTCGTCTCGCGAAATGTTTGGTGGCAAAAATGCAGAC
CAGATGAAAGGAAGTGAAAATGTGATCGACACAAGACCAGTTGCAGCAAT
CAAGCTCCTTACTCTTGGAGATTCAGGTGTCGGTGAGTTAAAGCTTCTCT
TTTATAACCTTTCTTGCCAAAAAATCAATGAATCTGGTTTTGGTTATGCA
TGGAGCAATACACCCCTGACTCACAGCCCCGGTGAAATTCTTTCCTACAG
TGGGGGTAACAATCCCGATTAAAATCTCAATGGGGATAAAAATTCTATTG
TTCCAAGGTTAAAAAATCCAGTGGGGATGGTTTTGGAATGCAATTTCTAA
ATAATGATTTTCGAATGGGGATGAAATCAAAGTCAATTTCTCAGCAGGGC
TGAAATTCTAGGGTATTTTTCCCACCGGGGATGAAATTTTAATTTGTTTG
ACTTGTGCTCAATTTTTTTGTCTCGGATCATGGATTTATAAACATCGAAT
GAAATGGTGGAGAGCGAAGTATTATCTTTCCATTGTTTTAGAGAACGATC
AATCTACAGGCTTTGTCCGCAAAGGACAACTGACAAGATTTCTTTCTACA
GTAATATTTCTCCGAGAAAAACTGAGATTGACGTATATTAGACAAGACCC
CCATAGCTCCACTGTGGCATTAAAATCCTTTTGTGGCACGTGGTGGTATG
GTGGCTTCTTCGAGGTATTTTGAAAATTTCTGGTGTCAATATTCGATTAG
CATGCTTTTGCATCTTTCTTGCAATTTCAAACGTCATAACGACACATACT
TTGTAATTAATTAGATGAAATTAAATGAAAAACCATTCAAGAAAATCATT
CAATACTCTCCAGTATTGAATGATTTTCTTGAATGGTTTTTCATTTAATA
ATGAACAATAATGTCATTCCTGTCATTCCTGCGGACAAGGCTTGAACATG
AGAAATTGGCGAAAATCAGTCAGTTGTTTTTCCAGTGTCTACATAATTCC
TTTCTTCGAATTTAATGTGTCCAGAAGTTATGGTATACACAGCATTACAG
TAGACGCCCGGTTATTCGAACCTGCACTTATTCGAATAATTCGGTTATTC
GAAGTGATATGGCGTTCACCTTGGATCTGCTTACTAAACCCAGGCAAAAC
CCGAGGGGGGGGGTACTAGGGCAAGATGGGTTACGGGGATGCTCCGCTGG
CCAGGGTACCTTTTTTAACCGCCACGAGTCCCAGGTAGGGTTGCAAAAAC
ACCAAAATATAAAAATCAGTCCCTCGTAGGGTGCCTATTTTTGGAAATTT
TGGGGAAAAAGTAGAAAATTTGAAAAATTTTTGGAATTTCAGTCCCATTC
AGGGTCCCACGTAGGGTCCATTTTTCGAACTTCAGCGGAGCACCCCCGTC
GGTCGACAAGGGTAGTACCTCCCCCGGAGGTAAAAACACTCTCGGTTATT
TGAACTTCAGTTATTTGAACTTTCAGTTATTTGAAGCTATTTCTATTCCC
CCTGGGGTACATTATAGACTAAATCGCCCTCCTCAGTTATTCGAATTTTT
CTTATTGGGAGATCGTCGAGTGAGAACATTTTCTGCGATTGAAATATTTT
TTTCCATTAAAAAACAGGTTTCAATATTTAGGGCTATATATCGCTATTCA
AGTAATTTCTTTGTGTTTATTACGCTCAACTGAACTGCAATGCCTTAATT
ACTTCAGAAAAGCCCCTCCAATTAAGGTTAAGTTGAGAACCTGGCGGGAA
AACGAATTTTTCAGTTATTCAAACTCTCGGTTATTTGAAATAAATTCTTA
TCCCCCTTGGAGCTTCGAATAACCGGGAGTCTACTGTATCTCCAGCATGG
AGAATTAAGTTATAGGGAGTGGTCAGAAAGTATCTACTAGGGTTAGGTGG
AGGATATTTTCAAAAATTTCCTTGATATCCTCAAAAAAGATTCAGCCGCC
CTTCCTAACTAGTCAATGTATTTTGGTACCCCCCTCCTAATAGATGCCAC
TTGAAAACTTCTCAAAACGGATGATTTGACGCTACAAAAATAGCAGCTGA
CAGAGACGTAGTTATGAGTTTAGGTTCTGGGGGAGAGATAAAAAACAATT
GACCTTTTTTAGGTCAATGCTTAAAGGAGGACATGCTTAAACATGCTTAA
AGGAGGCCTTAATAAGGTCAAAGGTAAACAAGGAACATTTGAAATCTACT
CTAATGAAAAAAATTGAAGCCCCCGCCTAAAGACTTGAAGTTTTTTCTCC
CCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNTTTTTTCCCCCCCCCCCCCCTAGTAGATACTTTCT
GACCACACTCTTAATCCTTCTGAATATATCCACGCTGGTCGGCTTTAAAT
TATCTTTCAATCAAATGCGTATCCAGAGCAAATTGCACAGCTATTTGATT
TGCGGAGACTAAGCAATTGTTTTCAATGTTTAGACTAGACGATGTTTAGA
CTTGAGGGTGGTGGGGTGACTAGTTGAAACGATTTGAAACAACCCGCTGT
TTTTACCCGTAAAATCCAGGATGCTGATTTACCGTCGTCATCGGTCAATC
AAGATCTAGAAAAATCGAAACCTAGCAATCTCCATTGTATAAAAACACAC
AAACATAAACTCGGTATAAATATCAGCCCAAAAGTGTTGAAAACGATTCC
CAAAACCAATTGCATAGCAATATCATAAAAACAGTACCATTATACACATC
AACTTTTCAGGGAAAACATCCTTGACGATCCGATTTGTGTGTGGTGGATT
TGAAAATAGATTTATTCCAACAATTGGCATGGACTTGCAAGAAAAAATTA
TGGTAAGTGCGAGGCTTTCTATACGACCTGGTCGCTTATCATGCTTAGCA
TGTTGACTTGACTTATTCTACTTTTTAGTCCAATACACGCGCCTAGATAT
GGGCGTATCCATATATCCAGCGTATTTTTCATATCCTGTATATCGCTATT
TTGGGTAAGATCTCACTGACTAGGACTCCAGTGAATTATTTCCTGGACAT
TTTTGCTAAATATTTCGAGGAAAGGAAGGTTAAGTCGAACCGAACATCTG
ACAACTTTCTTGGATGATGATTGATGATATCTGTGGGGATTGGGAAAGGG
TGTTACAGTGCATATCATCTTTGCAATTGTTAAAGACGACTAAATCAGCG
GAAGCGAGACATTATATTACACTCTAGAGGTACGCCTTATACTCTTCAAT
ACTTCGAAAGATTCCNTTGTTAAAGACGCCTGAATCAGTGGAAGTGAGAC
ATTATATTACACTCTAGAGGTACGCCTTATACTCTTTGAAGCTTTCGAAA
GATTCTTTGTTAGCCCAAATTTGCATAACAGGTGCAATTCATGATATGCA
ACACTGGAGAGTCTTCCAAGAATTTTCAAAAAGTTCAACCCAATACGTCA
CTTTTTCTATTGTTTAAGTGTCGTATTGGGTTGAACTTTTTGAAAATTCT
CAGAAGACTCTCTAGTGTTGCCTATCATGAATATAGCTAGAAGGGAAGGG
AACTCGCGAGATATCGTGAATGCCACAGGTTGGCCTTCCTTGTAATGTGA
CTAATGTGTTTGAAAAAGTGTAGAATTTTTTTTGCACTGAATCTTCACAC
TGGTTCACCATCGGGGGGGGGGGTCACTTAGACAAAAGGAGAATGCGGGT
ATATGCCATCCTTAAGGGTGCCTTTTTTCGATCGTTAAAATCCCACTAAG
GGTCGTAAAAATCACAAAATCTCTAATTCCAGTCCCCTTAAGGGCTGTAA
TCACCTGAAATCCTATTTCTTGACCCTCAAAACTCAAAAGCCTAAATTCC
AAGTAAAATAGTCCCAGTCCGGCTTTTTCCTGGTTGGTGGGGCGAGGAAA
GAGGAAATCACTCCCGGGGGTGGGGCACTCGATTTCTAAACGACAGCATG
TGCCACCAAAAAATGGCTTTCAAAATCGGACGCTTACAGTGCAGCCCTTC
AGCAGTGAAAAGATACCCTTACAGTACATTTTACCAAATGTTTCTGACCC
TTACAGTGTAGTTTGATTTCATATCTTATTTTGCTGAAGCCACCGGGAAA
AGAACCAGAGATGTCGCGACACAATGTGTAAAACAAATCAAAATGGGCGC
GAGTCAAAACTATTAAATTAAATCAGATTTTAACTGTCACACTTCCAATT
CAGCAGTCTCCAAAGACTAGCTTTACAGTTTATCCAACAAAAAGAAGACC
CTGTGAACTCTATAAAAAGTTCACCCTTACACAGTGCATTTCGATAAAAA
CCTACCCTTAAGGGTGGCACATGCCGTGGACTAGAACATATGAGTGCCAC
CTAGAAAATCCCTGCCAAGATCAAATGATAACCCCCACTTCCCCTTCCCT
CAGGACTGTCAAAAGAGCATTAACATGCCCGGGGGTACTAGGATTGGCGG
ATGAGCGAGAGGTATGTCTTACTCTGTACCAGAGTGTATCTCACGTTTAT
CGCTTCGTAGTACACTCTGTGCGCATTGTCTGTTTGATAAAAAAAATTCC
CGTACATATACCTCTGCGATGAAGTATGAATTATAAATAGCAACACAACT
CTTATCGTCTCTCCTTTCTCGCGAACACTCCATCGCAGCGGTCGGTTTGA
AAAATCTCAAATGAAAAAAGACAATGACAACAGACTCTCTAACGGCAATG
AATTTGAAACTGGCTGTAGACACTGGGTCTGTGTACAGACAAGGTATGTC
CGGAAGGGACCGAAAACCGAGAGACTGATTTTTGAACCGTGAGTATCACA
GCTCGATTAAAAACCAACCCTAACCGTCCGCACATACCCCAGCACCCATT
TTTGCCTAAGTAAGTACCCCCCCAAGATAACATGAAGAAACTGAATTCGT
ACGGTAAAGTTCTGAATGAAAAAGTCTATCAAATTATTTCACTAACAACA
AAGCTCGAAAACAAAAACTCAGTCAAAGATCTTGGAGCGTGGATATGAGT
AGTGACCGTTCATTCATAGATCCTCGTGATTCAGACTAGGAGGGCACCGT
AGCGTAAGCGTAAGAAGGCAGATTTTCTTACACGGAGCCGGTTTTTAGAG
GATGTGGTCAAAGCATAGATATTTAAAAGAATTCTTTAAAAGAGAATTTA
GCCTGTCGATCATCGGTTTCCATTACCACTAACTACATACAGAAGCAGCC
AACGAGCCCATTTCCCCGAAATATCTGTTTCCCTTTTCCAGGAGAGAGCT
TTTTTTGAAAAATGGGGAAACAGATCCGTTTTTCTAGGAGAGACCTTTTC
CTTAAAACTATCTGTTTCCCCGCTTCAGCTGATGACGTCATCAGAGAGAA
ACATATCAATATTTCTAGGAGATGACATGATAAATTGGGAAACAGATATC
TGTTTACAAAAAAAATGATATTGCATTGGAAACGGATTGAACTTTATGGG
GGAAACAGATATCAATAACAAAAAGAAAGGGAAACAGATGAAAATTTCCA
GGAGAGGGGAACAGATATCCTATTTGGGAAAACAGNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNTCCGATTTCCAGAAGAGGGGAACAGATATCCTA
TTTGGGAAAACAGATCAAAATTTTAATTCTGAAAATTGTGGAAACAGATC
AAATTTTTCTAGGAAAGATAGTTTGAGATTAAAAATTTAGGTTTTGCGGA
GAAACAGATCTTCATTTCTAGGAATAAGATTTTTGAAATATTCGGCCAAC
AGATCAAATTTTACAGGAAGGCTATGTCTAAAGTAGAGATCACCGAAATC
GATCTACTTGGGCGTAATACGGGGGGCGTAAAAGTATTACGCCAATATTC
GATTTTTGAAAGCGAGGCTAAACATCTGTCTTCCGATTCAAGTCGCACAA
ACAAAAACATTACAAAAAAGAAGCTGCTGGTTTTGGTGGTTTGGAAAAAA
AGATCAACTTTTTAATATTGAGAGGTTTTATTGGAAAATAGTTAAAGAAG
TTTGAGATTTCCTTGGGAAAGATATGATATAGTTCTAATAGTATCTATCA
GCTTGTAGATAGAGAATGGATGAAAAGCCTCCACCTCAAATAGCTGATTA
TGATTATTTAATAAAACTTCTTGCACTTGGGGATTCCGGAGTCGGAAAGA
CTACCTTCCTTTATCGATACACTGATGGAAAATTTGCAGAGGAATTTATA
TCAACAGTAGGAATAGACTTCAGAGAAAAAAGAGTGGTGAGTTTAAAACA
ATAAGATCTGGGAAATAAATATCTAACATGAATTACGCGTGGTCCAGTGT
GGAATCCATGCAAAAGCCACGCCAAAGATATTTTGAGGATCAAGAAGGTT
ACACCCAATTGAGGACATTCTCATGAATTCCAGACTGGCGCAAGGTGCAG
CATGACATTACACACGACCCTGCCGATTCCCCGGACGACCCTCGACATGG
CCCGAGAATTCTCGGGCCTCTCGGGCCATGTCGGGCCGCAGAGACCCTAT
CAATTCTTTTGGCCCGAACATGACCCGAGTCATTCGGGCCATGTTCAGGC
CATGTTAAATGTTTAATTGATTCAGCATGTCCAGTCAAACAAAATAGTAC
AAAATAAGATTTGTCTGTTTTGTTTATATCGCTCAAAAAACTTTACGAGC
TTCCCGTGGACACGCTTCAGTTTAAAACCAGGACCAGTTTACTAGCAAAT
ATTTCTATCCTTAGTATATTTATAACTATGTTTTCATACCAAATAAGATA
TTTAATATTTATATGAATTTACAACATTCATATATTTAGTATAATTAAGA
GAAACCAAGTTTTTCTCAAAGAAAATGTTTAAAAAATTCAGTCCTGAAAT
TACACGCCTGTTTAAATCATGTTTTCAAAAATTGGCCCGAGTGTGGCCCG
TNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTGG
CCCGCGTGTGGCCCGAACACGGCCCGAATTCTCGGGCCAGCTCGGGCCAT
ACTCGGGCTTTACGCGAATTCCAATAAAAGTTTTGGCCCGAGAATACTCG
GGCCATGTCGAGGGTCGTTTCCCCGGACAATCCGGGGATTTTACAAATCA
AACTCCATCGAACAATTAAAGTTTGAGTAAAAAATTTAATCAAAATCTAA
GATTTTTAAAAGAAAATGTGAGTCTTCGATCAAGCTCGCTCAATGGGTTG
CAGTTCGATCAGTTTGATAAGCCAAATTTGTTTGACAAGCTCATGCCGCT
TCACTTCTCTTCAAAACCAAATTCAGAATATAAATTGGGAAAATACTTCT
TATAACAGATTATACATTTTTCCTGTGCTGCACCATCAACTGCTCTAACT
TGGGACGATTGGTCGAAACATGGGACTGTTGATATCTGGCCTGTATTTTC
ACTTACTGTTAAATCTCTTTGACAACAAATTTGTTTTGATAACTCCACCA
AGTTTATCAATGATACTTTCTGTCATAACATGTCACGATAACTTTCACTG
ATAGCGCGTCCTTTTTAACTTTTTTGTTTTCATTCAAAATGACCGGACGC
CAATTGGAGAACGCCCACCGCCAATTGGAGAACGCCCACCGCCAATTGGA
GAACGCCTGCCGCCTAACCGTCTATCGTCTGATGGGATTAACAAATAACG
AGTGTGTAACTTGCCGCTCGAGTGACAACCCACGGCATGGCCCGAACATG
TTCGGGCCATGTATTTACAATTGATACGGATTTATTTACCTTTCCTGGTT
TATCATCATCCATTGTTAAATATTTTCATTAAGACAAATTCAAAGTTCCA
AATACCAGTTTGATTCACAAAGTTGTATAACAGTACAAAAAACGATCCAG
AAAAATTCTGCTTCGAATAGGAGAAGAGCACGAGAAAAGGGAACGGGATA
AAGAATAAAAAGAAGACCATATTATGTAAGATTCAAATCATTCTTTTTAA
TAATTTTCCTAACTTAATTGGAAAATAGATGATTANNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNATGAAGATTTTTAAATTTGTTT
GCTAAAATAAGGAATTTAAAATATAAATATTGGGTCCTGAAATTACATGC
GCGATCGTAGCAAGTTTTCGAAAATCTGGGCCGAACATGGTCCAAAACTG
CGCGGACCCGCGCGGGCCATTTTTAAAAAGTATTAATCAAGAGGCCCGAA
CATGTTCAGGCCATGCCGTGGGTTGTCTCGAGTGACGTCAAATGCTCCAT
CGTTTTACCACTAACTCAGTCTTCTTCGTTCCAGATATTTGCATGTGTTC
CACTACAGATTTTTTTTCATATTTCATATTTTAAAAGCCTACTCTGTGCG
AAAGAGAAATCGTGTAGTTTTTAATACGCTGTTCGTTAACTCAAATCAAA
TGACTTTGGAGGTTCGGTAAAATGGTGGCCAAATTGCGGTCAAATTGCGG
TCCCATGTTTTGTCAGATGTCCCAAGTTAAAGCAGTTAACGGTATCCTTT
CAACGTCATTATCAGGGTTGTTGGAAGATAGTAGTTTGCCACGCAGCTGC
AGGCAAAATCGTAACAGAGAGCCTACAGACTTTATTCCGGATTGACAAAT
ATCCGGGTACAATGATAATTCTTAGGTCCAGGAACTATCAAAATGGCAAT
TGCGATCCAAATGAGGGAAGAGGTAAGGATTGATACAGTGCTGCAAATAA
GGAAATTTCAGTTGGCCGGTAATTTTTTGAGTGCATCAAAAATAATTTGT
ACATGGATTTGGCAGAACCCCTTTGAATAGTCCGAAATGACCTTTAGATT
GGCTCTTTTAATTCGAATTGCTATTAAGTATTTATTTAAGCCTCTAACCA
TCAAATTTTAACCGGACAAAGTGAAAGATTGAGCTCCAGAATGGCTTGTA
GAACTGCGAAATTATTGGTAATTACCAGTCACCGGCTGTTATTTGCATCT
GTTGAATATCATCGAAGGAATGGAACTTTTTACTTAGCAAATTAATCAAA
CTCTTATTTCTTCAAAAATTGTGAGTGTCTGATTACATTCGAATAATTTA
TGAACTTCAATCATTTGATTGAGTTAGATTAGTTCGATTGTTTGATTGGC
TTGACAAGTTCGATTGATCGGGTCTGTATGATGTAGATCAAACAAATTTT
GCTTAATGTTCAGAGCGCATGGCGGGGGGTTACACTCAAAAAAATTGCAA
ACGAAAACTGGGAGCTAAAATACAGAAACAAGTAGCCACCTTCACAAAGC
AAAATATAAAAGAAATATTGCATGCAAATTCGTGATAAATTTAATGCGTT
GCAGACAAAAAAATTTTCAAGAGGGATAAAATGGGATAAAAGGGGATAAG
GGATAAAACCTTCCCCACAGCATAGATTTTTAACATAATTTAAAATATCT
TCAATCTATCAGCTCTGTCCCCAGTTTTATTACACAACACTCAGCCCCCC
CCCTAGCAAGCTAGCCCCCAGTATTTTTTGAAAAATACAGCCCCCAATCA
AGCAAAAATGGTTTAGCCCCCCCCCTAAGCTCAGGGGGGGTGCATTCTAT
GAAGGCGTTTTGTAGGGAGAGACTTTTTACAGCCACTCACTATACAAAAA
TTTCTGTTAACTAAACTTGGGACGATCCTACCAAGGTAGAGGACATTTTG
TGCCAAGTTTTAAGTTCATAGCATCCCTAGTTTACAAAAAACACTAAGGA
GGATGGAAAATATTCCCCTCCCTTAATAATATCAAACCCAAAAGGCTTGT
TAATAATCTCATAGTCTTGTCAACTTTTTCTTTTAACTCTTGGTCAAACT
TTTTAGATGTCTTTTGGATGTCTGCTGCAAAGATAATTTCCACTAAATAT
ATACAGAAAAAAGTCTTTTTTTAAAAAGCCCTAGGAAAATGAATGAATTT
GGACACAAAAAGGGTGATTAAAATTTCGCTTAGAAACCTATTTCAAATAT
TAGTACTGCAAAAATTATTCCACAAGAAGAGGAGTTATTTTTATTGCTAC
CTATCTTTTAATTGATAGGTATACCATGCGAAAAATTCTGATGGATCCAA
ACAAGCGAGAGGGCAGAGAGTTCATCTTCAACTATGGGATACCGCCGGCC
AAGAAAGGTATGTTTACAAACAATGCGTAATTGAAAAAATAAATTTTGCA
CTCAACAATCCGCTTTACTTTAGTTGAAGCGTTTAGTTTTATCATTACAC
GTTTTTTTGTAAGAATAAACTATATAAGAACATAAAGCTTCGATGGCCAA
AATCTCAAGAACATGTTCAGGAACATTTTACGGCTTTGCAGACTCTAAAA
CACCCGATTTCTTAAGAAAATAGGCAAAAATTGTCCTAAAATGGTGAAAA
TATAAAAATGTTAAGAGCATTTTTAGGCTTAAAATCCAAAAAGTTAAGAA
AATCCGAAGATTTCAAACATTTTTGGATGTTCTTATAAAAAAGACGTTTT
TAATTTTAATTTCAATTTAATAAAAACATTTATATTTTTATCATTCTCTT
GCTTTTTATATGTGTTTGTAATATTTCTTTTGGGTCACAAAAGTTGATCA
CTTTTAAAAACACTTCACTTGTGTGAAGAACCTAACAATATTCTAATCCC
AAAACAAAGCTTTGTGTCAATATTTAAATATCACTTTTAGGTTCAGAAGC
TTAACAACAGCATTCTTTCGTGATGCAATGGGATTCTTATTGATGTTTGA
TTTAACACATGAAGAATCATTTGTCAATGTGAGGAGTTGGTTGTCTCAAC
TGCAAACACATGCATACTGCGAAGACCCAACTATAAGTAAGCTTGTTTTA
CAGACAGTCAATGGCCTTCATTGTCACTTTTCTTTCTATTCCTTTATTTC
ATAGATAGATGGATGGATAAATTAATTAATTACTTTTTCGGGATTAGTGA
GGTAGATTACAATTATTTACCCCCGTTTGTATACAGGCTGATCTAAGCTG
AATCTAACGATTCGTTCGCAGAACGTTCTAAAGTTGAACATTGAACAAGC
TTGAAATAATATGATCTATTATAGAGAAGCTGTGTAGATAATACATTTTC
AAATCGTTTGGTACCTTTTTAATTAATTACTTGCTAATGGTTTTAATTGA
TTGCATGTTGGTTTCTATTTTAAAATGAAAATAATAACCCCTAATTGATA
AGGAAGGAGATTCATGTTAGATTTTGTGAATTGAAAGTTATCCGTGACTC
CAACAACCTCTCCTCGAGCAAAAGAACTGAGAATTGTTTCCCTTTTCTGC
GGTAAAATCTTAATTTCAGTGGTTATATTCTACGGTTTTTTAACTTTCAT
TTTTTTTCATTAATCTGTAGACAGATTTATAAATTAATTTTGCACTGGAA
GACAAAACTTGAATCATGTCTTATTATCTCTTTAGATTTGTAGTAATTTC
CAAACAGTTTAAGCATAGATAAGGCTACAGACAGATAACCCGAAATCCTG
TTTGATTACGACCTTTAAAAAGTTCTTCTTTTGTTAGACATAACCTGAAT
ACCAGCAAGGGTTGTCTAAAAAGTTTATCAATGCTACTAAAGTCAAGCAA
AATATGTTGGGCCTTCTGCCAGAATCTCAAACAAAATATCTTTTCGACAT
GCTAAAATACAGATCTAGCCAATTGTGACCTCTTTCCAATTATTTTTTGT
TTAGTTTTGATTGGCAATAAGACTGATTTAGAAGCAGAACGGCAAGTCGC
CGAGAAAGCAGCCAGAGACTTAGCTGACTCTCTAGGGATCAAATATTTCG
AAACGAGTGCTAAGACTGGTGAAAATGTCAACGAAGCTATCGACGCTCTC
CTAGAACAAGTAAGTGTTTATATTTCAATCCTTTCTTTCTTTTTCTATCA
CTTGTGATTTGTTTCTGCAATATGCAGATTATATATCAATAACAATAACA
GTTGGAAAAATTTCAAAAATTGATAATTAGCTTCGTATTGGGTAAAAAGT
TAACAAAATGAAAGGGTCTTTCAGGTACCTGAGAACGGATTTCTTTTAAA
GTTGTTTACACTCCGCTGGTCTATTTAAATGTAAGAATCTTAATTTCATA
CACTTTGTTTTCCTACAGGTGATGGAACAGATGGAAAGATGTGTTGACAA
AGCCACCCTTCCGCCCTCCTTAGCGAATGGCGGTGAGCGAGGTCATAAAT
TACGTGAAGTAGACGAAGCACATGATGATAGGAGCGGTGGGTGTGCTTGC
TAAGGGCGTACTGCGACAGGTGATTAATAGGCACATGTAATTCGCAACCT
TTTCAAAATGGAATTATTAGATTTTAACAAATTTCTGTATAATGCAATTT
AGATGATTATGATATTTCTAATTTAATATCGCGAACTTTCTTAAAAATGA
AAGAGGAATTCATCCTAAGAAAATTAATATTTATTTAAAATTCCACTTTA
AATTTGTCCTTCTTCCATTTTGGGAAAATTAAAAAAACATACTAAAAAGA
TAAAATATTTTTTTGTGATAATTAGAGGTATTTTTAGTTTACTGGTAGTA
TTTTTATTTATATTTTATTATTAATATTTTTTGTTGTCTTGTCTTTTATG
TATACATATTGCATCATTAGAAGTTACATTGATTGTTGATTTCTTGTTGA
TTTTTCTTTGTAATTTTTCTCAAACCAATTTTATTAATGGAAATTAATTT
ACAAAAACACTGTCGAAGACACTGGTATTATACGAGATTTGATCATATAT
ACAGTTATTGCTCAAATCGATCACTCTTGAAGAGGAATCACTAAAATGAT
TCTCTTGTAAAGATTGTAAAAAATAGTCTTGGAGTTTGATTAACTCGCGA
TAAATCTTTTAGAATCATCTTTGAATTTGGTTCAGAGAAATTTATTCTGC
CAGTTTTAGTGGCATAGGCGTAGCGAGATACCCTGCAAAATTTATGGATG
AGAGCAGTTTTTACGACACTGTAATTATTGTCTTTGTTTTATCAAAAGAT
AATGAATATGTCATAAAAGTCTGCACCCCCTCATAAATTTTGCAGGGTAT
CTCGCTTCGGCTATGAGTGGGTATGAACTAAGGAGTTCCCTGGTCTGCCT
TCAACAAAATATTTCCATCTTGAATCTGACAGAACGACTCAAGTGTCCAG
TGTAGTGATTACATTACAGTCTCCATAACTCGAATTCCTCCTTAGTGTGT
TCGAGTTATGGAGGCTTAATATTCTCTTGTGTTTACTTTGAATGTGTTCG
AATCCACACTATGTCATATACATTTTCCTTTTCATCGTCGAATAAATAAT
AGACTACATTTGCTTTATTTTTTATTTATTGTTATATTGGATTTATATTT
TGAATATAAATTAACAAACTGGAAATTCACATTTGTCTGCTCTTTCATTC
CTGATTTGGTTATGTTCTCTCAATGATGAACTGGTGCTGTAGCCCGAAAA
CTATGACTTGGTCCAACTCAGCTGACTTTGATTTCAA

Coding sequence (CDS) from alignment at scaffold_266:532853..547089-

>TCONS_00056030 ID=TCONS_00056030|Name=TCONS_00056030|organism=Clytia hemisphaerica|type=CDS|length=4428bp|location=Sequence derived from alignment at scaffold_266:532853..547089- (Clytia hemisphaerica)
GTGATGGAACAGATGGAAAGATGTGTTGACAAAGCCACCCTTCCGCCCTC
CTTAGCGAATGGCGGTGAGCGAGGTCATAAATTACGTGAAGTAGACGAAG
CACATGATGATAGGAGCGGTGGGTGTGCTTGCTAATTTTGATTGGCAATA
AGACTGATTTAGAAGCAGAACGGCAAGTCGCCGAGAAAGCAGCCAGAGAC
TTAGCTGACTCTCTAGGGATCAAATATTTCGAAACGAGTGCTAAGACTGG
TGAAAATGTCAACGAAGCTATCGACGCTCTCCTAGAACAAGTTCAGAAGC
TTAACAACAGCATTCTTTCGTGATGCAATGGGATTCTTATTGATGTTTGA
TTTAACACATGAAGAATCATTTGTCAATGTGAGGAGTTGGTTGTCTCAAC
TGCAAACACATGCATACTGCGAAGACCCAACTATAAGTATACCATGCGAA
AAATTCTGATGGATCCAAACAAGCGAGAGGGCAGAGAGTTCATCTTCAAC
TATGGGATACCGCCGGCCAAGAAAGGGAAAACATCCTTGACGATCCGATT
TGTGTGTGGTGGATTTGAAAATAGATTTATTCCAACAATTGGCATGGACT
TGCAAGAAAAAATTATGATGTCGTCTCGCGAAATGTTTGGTGGCAAAAAT
GCAGACCAGATGAAAGGAAGTGAAAATGTGATCGACACAAGACCAGTTGC
AGCAATCAAGCTCCTTACTCTTGGAGATTCAGGTGTCGGTGATGGAACAG
ATGGAAAGATGTGTTGACAAAGCCACCCTTCCGCCCTCCTTAGCGAATGG
CGGTGAGCGAGGTCATAAATTACGTGAAGTAGACGAAGCACATGATGATA
GGAGCGGTGGGTGTGCTTGCTAATTTTGATTGGCAATAAGACTGATTTAG
AAGCAGAACGGCAAGTCGCCGAGAAAGCAGCCAGAGACTTAGCTGACTCT
CTAGGGATCAAATATTTCGAAACGAGTGCTAAGACTGGTGAAAATGTCAA
CGAAGCTATCGACGCTCTCCTAGAACAAGTTCAGAAGCTTAACAACAGCA
TTCTTTCGTGATGCAATGGGATTCTTATTGATGTTTGATTTAACACATGA
AGAATCATTTGTCAATGTGAGGAGTTGGTTGTCTCAACTGCAAACACATG
CATACTGCGAAGACCCAACTATAAGTATACCATGCGAAAAATTCTGATGG
ATCCAAACAAGCGAGAGGGCAGAGAGTTCATCTTCAACTATGGGATACCG
CCGGCCAAGAAAGGGAAAACATCCTTGACGATCCGATTTGTGTGTGGTGG
ATTTGAAAATAGATTTATTCCAACAATTGGCATGGACTTGCAAGAAAAAA
TTATGATGTCGTCTCGCGAAATGTTTGGTGGCAAAAATGCAGACCAGATG
AAAGGAAGTGAAAATGTGATCGACACAAGACCAGTTGCAGCAATCAAGCT
CCTTACTCTTGGAGATTCAGGTGTCGGTGATGGAACAGATGGAAAGATGT
GTTGACAAAGCCACCCTTCCGCCCTCCTTAGCGAATGGCGGTGAGCGAGG
TCATAAATTACGTGAAGTAGACGAAGCACATGATGATAGGAGCGGTGGGT
GTGCTTGCTAATTTTGATTGGCAATAAGACTGATTTAGAAGCAGAACGGC
AAGTCGCCGAGAAAGCAGCCAGAGACTTAGCTGACTCTCTAGGGATCAAA
TATTTCGAAACGAGTGCTAAGACTGGTGAAAATGTCAACGAAGCTATCGA
CGCTCTCCTAGAACAAGTTCAGAAGCTTAACAACAGCATTCTTTCGTGAT
GCAATGGGATTCTTATTGATGTTTGATTTAACACATGAAGAATCATTTGT
CAATGTGAGGAGTTGGTTGTCTCAACTGCAAACACATGCATACTGCGAAG
ACCCAACTATAAGTATACCATGCGAAAAATTCTGATGGATCCAAACAAGC
GAGAGGGCAGAGAGTTCATCTTCAACTATGGGATACCGCCGGCCAAGAAA
GGGAAAACATCCTTGACGATCCGATTTGTGTGTGGTGGATTTGAAAATAG
ATTTATTCCAACAATTGGCATGGACTTGCAAGAAAAAATTATGATGTCGT
CTCGCGAAATGTTTGGTGGCAAAAATGCAGACCAGATGAAAGGAAGTGAA
AATGTGATCGACACAAGACCAGTTGCAGCAATCAAGCTCCTTACTCTTGG
AGATTCAGGTGTCGGTGATGGAACAGATGGAAAGATGTGTTGACAAAGCC
ACCCTTCCGCCCTCCTTAGCGAATGGCGGTGAGCGAGGTCATAAATTACG
TGAAGTAGACGAAGCACATGATGATAGGAGCGGTGGGTGTGCTTGCTAAT
TTTGATTGGCAATAAGACTGATTTAGAAGCAGAACGGCAAGTCGCCGAGA
AAGCAGCCAGAGACTTAGCTGACTCTCTAGGGATCAAATATTTCGAAACG
AGTGCTAAGACTGGTGAAAATGTCAACGAAGCTATCGACGCTCTCCTAGA
ACAAGTTCAGAAGCTTAACAACAGCATTCTTTCGTGATGCAATGGGATTC
TTATTGATGTTTGATTTAACACATGAAGAATCATTTGTCAATGTGAGGAG
TTGGTTGTCTCAACTGCAAACACATGCATACTGCGAAGACCCAACTATAA
GTATACCATGCGAAAAATTCTGATGGATCCAAACAAGCGAGAGGGCAGAG
AGTTCATCTTCAACTATGGGATACCGCCGGCCAAGAAAGGGAAAACATCC
TTGACGATCCGATTTGTGTGTGGTGGATTTGAAAATAGATTTATTCCAAC
AATTGGCATGGACTTGCAAGAAAAAATTATGATGTCGTCTCGCGAAATGT
TTGGTGGCAAAAATGCAGACCAGATGAAAGGAAGTGAAAATGTGATCGAC
ACAAGACCAGTTGCAGCAATCAAGCTCCTTACTCTTGGAGATTCAGGTGT
CGGTGATGGAACAGATGGAAAGATGTGTTGACAAAGCCACCCTTCCGCCC
TCCTTAGCGAATGGCGGTGAGCGAGGTCATAAATTACGTGAAGTAGACGA
AGCACATGATGATAGGAGCGGTGGGTGTGCTTGCTAATTTTGATTGGCAA
TAAGACTGATTTAGAAGCAGAACGGCAAGTCGCCGAGAAAGCAGCCAGAG
ACTTAGCTGACTCTCTAGGGATCAAATATTTCGAAACGAGTGCTAAGACT
GGTGAAAATGTCAACGAAGCTATCGACGCTCTCCTAGAACAAGTTCAGAA
GCTTAACAACAGCATTCTTTCGTGATGCAATGGGATTCTTATTGATGTTT
GATTTAACACATGAAGAATCATTTGTCAATGTGAGGAGTTGGTTGTCTCA
ACTGCAAACACATGCATACTGCGAAGACCCAACTATAAGTATACCATGCG
AAAAATTCTGATGGATCCAAACAAGCGAGAGGGCAGAGAGTTCATCTTCA
ACTATGGGATACCGCCGGCCAAGAAAGGGAAAACATCCTTGACGATCCGA
TTTGTGTGTGGTGGATTTGAAAATAGATTTATTCCAACAATTGGCATGGA
CTTGCAAGAAAAAATTATGATGTCGTCTCGCGAAATGTTTGGTGGCAAAA
ATGCAGACCAGATGAAAGGAAGTGAAAATGTGATCGACACAAGACCAGTT
GCAGCAATCAAGCTCCTTACTCTTGGAGATTCAGGTGTCGGTGATGGAAC
AGATGGAAAGATGTGTTGACAAAGCCACCCTTCCGCCCTCCTTAGCGAAT
GGCGGTGAGCGAGGTCATAAATTACGTGAAGTAGACGAAGCACATGATGA
TAGGAGCGGTGGGTGTGCTTGCTAATTTTGATTGGCAATAAGACTGATTT
AGAAGCAGAACGGCAAGTCGCCGAGAAAGCAGCCAGAGACTTAGCTGACT
CTCTAGGGATCAAATATTTCGAAACGAGTGCTAAGACTGGTGAAAATGTC
AACGAAGCTATCGACGCTCTCCTAGAACAAGTTCAGAAGCTTAACAACAG
CATTCTTTCGTGATGCAATGGGATTCTTATTGATGTTTGATTTAACACAT
GAAGAATCATTTGTCAATGTGAGGAGTTGGTTGTCTCAACTGCAAACACA
TGCATACTGCGAAGACCCAACTATAAGTATACCATGCGAAAAATTCTGAT
GGATCCAAACAAGCGAGAGGGCAGAGAGTTCATCTTCAACTATGGGATAC
CGCCGGCCAAGAAAGGGAAAACATCCTTGACGATCCGATTTGTGTGTGGT
GGATTTGAAAATAGATTTATTCCAACAATTGGCATGGACTTGCAAGAAAA
AATTATGATGTCGTCTCGCGAAATGTTTGGTGGCAAAAATGCAGACCAGA
TGAAAGGAAGTGAAAATGTGATCGACACAAGACCAGTTGCAGCAATCAAG
CTCCTTACTCTTGGAGATTCAGGTGTCG
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_035254XLOC_035254Clytia hemisphaericagene
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00056030-proteinTCONS_00056030-proteinClytia hemisphaericapolypeptide
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00056030-exon-scaffold_266-1575043694:546858..547089TCONS_00056030-exon-scaffold_266-1575043694:546858..547089Clytia hemisphaericaexon
TCONS_00056030-exon-scaffold_266-1575043694:543938..544029TCONS_00056030-exon-scaffold_266-1575043694:543938..544029Clytia hemisphaericaexon
TCONS_00056030-exon-scaffold_266-1575043694:536183..536271TCONS_00056030-exon-scaffold_266-1575043694:536183..536271Clytia hemisphaericaexon
TCONS_00056030-exon-scaffold_266-1575043694:535504..535649TCONS_00056030-exon-scaffold_266-1575043694:535504..535649Clytia hemisphaericaexon
TCONS_00056030-exon-scaffold_266-1575043694:534481..534635TCONS_00056030-exon-scaffold_266-1575043694:534481..534635Clytia hemisphaericaexon
TCONS_00056030-exon-scaffold_266-1575043694:532853..534221TCONS_00056030-exon-scaffold_266-1575043694:532853..534221Clytia hemisphaericaexon
TCONS_00056030-exon-scaffold_266-1510915933:546858..547089TCONS_00056030-exon-scaffold_266-1510915933:546858..547089Clytia hemisphaericaexon
TCONS_00056030-exon-scaffold_266-1510915933:543938..544029TCONS_00056030-exon-scaffold_266-1510915933:543938..544029Clytia hemisphaericaexon
TCONS_00056030-exon-scaffold_266-1510915933:536183..536271TCONS_00056030-exon-scaffold_266-1510915933:536183..536271Clytia hemisphaericaexon
TCONS_00056030-exon-scaffold_266-1510915933:535504..535649TCONS_00056030-exon-scaffold_266-1510915933:535504..535649Clytia hemisphaericaexon
TCONS_00056030-exon-scaffold_266-1510915933:534481..534635TCONS_00056030-exon-scaffold_266-1510915933:534481..534635Clytia hemisphaericaexon
TCONS_00056030-exon-scaffold_266-1510915933:532853..534221TCONS_00056030-exon-scaffold_266-1510915933:532853..534221Clytia hemisphaericaexon
TCONS_00056030-exon-scaffold_266-1491911889:546858..547089TCONS_00056030-exon-scaffold_266-1491911889:546858..547089Clytia hemisphaericaexon
TCONS_00056030-exon-scaffold_266-1491911889:543938..544029TCONS_00056030-exon-scaffold_266-1491911889:543938..544029Clytia hemisphaericaexon
TCONS_00056030-exon-scaffold_266-1491911889:536183..536271TCONS_00056030-exon-scaffold_266-1491911889:536183..536271Clytia hemisphaericaexon
TCONS_00056030-exon-scaffold_266-1491911889:535504..535649TCONS_00056030-exon-scaffold_266-1491911889:535504..535649Clytia hemisphaericaexon
TCONS_00056030-exon-scaffold_266-1491911889:534481..534635TCONS_00056030-exon-scaffold_266-1491911889:534481..534635Clytia hemisphaericaexon
TCONS_00056030-exon-scaffold_266-1491911889:532853..534221TCONS_00056030-exon-scaffold_266-1491911889:532853..534221Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_266supercontigscaffold_266:532853..547089 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
26.7771	27.5631	12.5423	13.1132	0.93103	1.08463	16.0816	12.8386	30.9513	34.1443	13.2819	21.1695	13.2852	16.2575	6.54169	8.20628	11.5543	13.5727	10.4269	9.76781	6.42832	6.96014	15.042	13.5189	7.06441	4.98616	4.68873	7.12733	4.00151	6.11147
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR005225Small_GTP-bd_dom
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity
GO Annotation
GO Assignments
This transcript is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003924 GTPase activity
molecular_function GO:0005525 GTP binding
Blast
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BLAST of TCONS_00056030 vs. Swiss-Prot (Human)
Match: RB27A (Ras-related protein Rab-27A OS=Homo sapiens GN=RAB27A PE=1 SV=3)

HSP 1 Score: 255.373 bits (651), Expect = 2.784e-79
Identity = 123/207 (59.42%), Postives = 159/207 (76.81%), Query Frame = 1 
Query:  199 IKLLTLGDSGVGKTSLTIRFVCGGFENRFIPTIGMDLQEKIMVYHAKNSDGSKQARGQRVHLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTHEESFVNVRSWLSQLQTHAYCEDPTIILIGNKTDLEAERQVAEKAARDLADSLGIKYFETSAKTGENVNEAIDALLEQVMEQMERCVDKATLPPSL--ANGGERGHKLREVDE 813
            IK L LGDSGVGKTS+  ++  G F ++FI T+G+D +EK +VY A   DG+   RGQR+HLQLWDTAGQERFRSLTTAFFRDAMGFLL+FDLT+E+SF+NVR+W+SQLQ HAYCE+P I+L GNK+DLE +R V E+ A  LA+  GI YFETSA  G N+++AI+ LL+ +M++MERCVDK+ +P  +  +NG     +L E  E
Sbjct:   10 IKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRASGPDGAT-GRGQRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYCENPDIVLCGNKSDLEDQRVVKEEEAIALAEKYGIPYFETSAANGTNISQAIEMLLDLIMKRMERCVDKSWIPEGVVRSNGHASTDQLSEEKE 215
The following BLAST results are available for this feature:
BLAST of TCONS_00056030 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 1
Match NameE-valueIdentityDescription
RB27A2.784e-7959.42Ras-related protein Rab-27A OS=Homo sapiens GN=RAB... [more]
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