TCONS_00056035 (transcript) - C. hemisphaerica

Overview
NameTCONS_00056035
Unique NameTCONS_00056035
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length180

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00056035 ID=TCONS_00056035|Name=TCONS_00056035|organism=Clytia hemisphaerica|type=transcript|length=180bp
ggtcacttttaaTTTCAGCTTTTGATTAACTCAAGAAATTTAGAATTAAA
GGTATGACCATATATGGTAAAAAAACGGATTACAGAGTTTAAACTGTATG
TTCCCGATATACTTAAAAGCTGAAAACTGACATGAAGGAAGTTATGGTTA
AAAGGAAATTTTCTATCTTAAGACTTAGGG
Run BLAST on NCBI

transcript from alignment at scaffold_266:30758..30937

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00056035 ID=TCONS_00056035|Name=TCONS_00056035|organism=Clytia hemisphaerica|type=transcript|length=180bp|location=Sequence derived from alignment at scaffold_266:30758..30937 (Clytia hemisphaerica)
CCCTAAGTCTTAAGATAGAAAATTTCCTTTTAACCATAACTTCCTTCATG
TCAGTTTTCAGCTTTTAAGTATATCGGGAACATACAGTTTAAACTCTGTA
ATCCGTTTTTTTACCATATATGGTCATACCTTTAATTCTAAATTTCTTGA
GTTAATCAAAAGCTGAAAttaaaagtgacc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_035259XLOC_035259Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00056035-exon-scaffold_266-1491911889:30758..30937TCONS_00056035-exon-scaffold_266-1491911889:30758..30937Clytia hemisphaericaexon
TCONS_00056035-exon-scaffold_266-1510915933:30758..30937TCONS_00056035-exon-scaffold_266-1510915933:30758..30937Clytia hemisphaericaexon
TCONS_00056035-exon-scaffold_266-1575043694:30758..30937TCONS_00056035-exon-scaffold_266-1575043694:30758..30937Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_266supercontigscaffold_266:30758..30937 .
Expression
No biomaterial libraries express this feature.
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00056035 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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