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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00056069 ID=TCONS_00056069|Name=TCONS_00056069|organism=Clytia hemisphaerica|type=transcript|length=1632bp
CTCAAGAGAGTATTTGTATATTGTAAAGTAAAATGAtaagttttttttgt
gtttcaATATTATACAGTATTACTACTACAAACGAAGAAAACGAGGAATA
GAAAGAGGAACGAGACAAGAGagaaaaatcagaagaaaaggGAGAGATTA
AAAattagtttgagaaaaaaaaattcaaactctcaaagAGGTGAAAGAGT
TGATGACAGTGACGAATATATTTTGCATTTGTTGTTAATAATTTAcgatt
tttatataattttgttgTGTTGTCTTTTTTTGTATTGTATATGCTGATTT
ATGTCGAGGTGGAGCAGCAAACTGCTTGATTTACTAATTGAGCtgttttt
tcctgttttTCATTTCTAAATTTACGATCCCTCCCTTTCGTATCTATTTA
TACTTACATGCAGCTCTTAATTTTGAGCACAGAAGCTCTCATTTTGACAG
TGTTTGAAGTTGAAGTTGTAAATAATTTCTGTTTTGATGGAATGAAGTCT
TTAAGATAACGATGCTACAATGTAGTCGTCCAACACCAATTGGAAGTATC
AGACGATTGGCTGTCATCGCTATTTTCGCGTATGCTGCTTTCAAATTCTA
TGGTCGCGAAAATACACCagATTACACAAGCAAATCACACGGTGCAACTA
GTCGTCACCTACTGAGCGCTTTCGAATGGGAACAATGCAACTTTGAGATC
GGTCATACACGGAACTATTCGAATCCAGACTCTTGGTATTCACCAGCGTC
TGCTAAAGGATGGGTTGCTTTGTATTGTATCCTTATTCTCATCGTGTTTG
TTGctTTGGCAATCATCTGTGATGACTTTTTCGTGCCTTCTCTGGAAGCG
ATCagtgaaaaacttgatttaTCAGAAGATGTAGCAGGTGCCACCTTTAT
GGCGGCCGGCTCTTCAGCGCCGGAACTTTTCACGTCAATTGTGGGTGTGA
CGGTCGAGAGTGACGTCGGTGTCGGAACTATAGTTGGgAGTGCCATATTC
AATCTTCTTGGTATTGTTGCATTATCGGCAGCTTTTGCTGGTCAGGTTCT
ACATCTTGATTGGCGACCCTTGACGCGTGACGCTGCATTTTACTGTTTTT
CTATTTGCTTTTTCATCATCTTTGCATGGGATGGCAAATTTGAAATCTAC
GAAAGTGTCATTTTACTGGCCCTCTATTTTCTGTACATCCTTCTGATGAA
ATTCAATCCGAAGTTGATGGAGAAGATGGCTCAATGGGGATCACGAAAAG
TGGATCCTTCATCTGACAATAGCAACAAAAGCGATAAAGAAGATGGCACA
GAAACGGTAACATAACTTTTACTAAATAGTTTGTTTATTgtaaggggggg
gggcaagtGGGCAAATACAGATAGATGGATATACAGGATGACATAAAAAA
ATGTTGATGAAAAGTAAGAATTCCAATATATTAGGTAGGTAGTACAGTTT
GAAAGATAGTTAACTAACTGATTGTCGGAAATGTCAGTGATTGTTCATAT
TTCGAagctcgaatgtctccttaacttggacggttgttaatttttcgaaa
atttcccaaccccccggaccttattaggaccccccctgtttattaatttt
taagaatactttcagctgtcaaagagaaggcc Run BLAST on NCBI transcript from alignment at scaffold_267:29615..44592+ Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00056069 ID=TCONS_00056069|Name=TCONS_00056069|organism=Clytia hemisphaerica|type=transcript|length=14978bp|location=Sequence derived from alignment at scaffold_267:29615..44592+ (Clytia hemisphaerica)
CTCAAGAGAGTATTTGTATATTGTAAAGTAAAATGAtaagttttttttgt
gtttcaATATTATACAGTATTACTACTACAAACGAAGAAAACGAGGAATA
GAAAGAGGAACGAGACAAGAGagaaaaatcagaagaaaaggGAGAGATTA
AAAattagtttgagaaaaaaaaattcaaactctcaaagAGGTGAAAGAGT
TGATGACAGTGACGAATATATTTTGCATTTGTTGTTAATAATTTAcgatt
tttatataattttgttgTGTTGTCTTTTTTTGTATTGTATATGCTGATTT
ATGTCGAGGTGGAGCAGCAAACTGCTTGATTTACTAATTGAGCtgttttt
tcctgttttTCATTTCTAAATTTACGATCCCTCCCTTTCGTATCTATTTA
TACTTACATGCAGCTCTTAATTTTGAGCACAGAAGCTCTCATTTTGACAG
TGTTTGAAGTTGAAGTTGTAAATAATTTCTGTTTTGATGGAATGAAGTCT
TTAAGGTAAGTCATATAGCACCACACTGTGGGCAAGCAGGTGGAATTGTC
CGGGAATTTATCAAAAACCAATTGTTTCCGATTCTACATGAAATTTGCAA
CACATTAGGCTTAAGTTTGGGTcgattttctgaatttttgtccatttcag
TCTTTATTGAGCATTAAAAGAATTtggaaaaatagcatttttcgACTTTC
CCACTCTACAGAGCAAAGAAGGCCATAGTTACCCAATTTTGAAGCCAAAA
GcaattttttgacttgatttGCAAAGCTTAAGACTAAAGACTATTCCATC
CAAAAGAAGCTGTTTTTGGAtgaagaaattggaaaaattgaatgaatttt
ctcaaaaatgtgccgttttatgcatttttttaaggttcaaattttgacaa
agacCTCAAAATATCTCGATTTGCCTAAATGGAACCAATTGAAACTATAT
ATATTAATCCTCTATATATAAAATCCTctaatttaaacaaaaaacccATT
CCAATTTGCTTTTGAGTGCTCTATTTCTACCTAACGCCTTAATCTTTCCC
ACTATGCACCAGTACGCATTAGCACCGGTTTTTCAAACttgtttttgctt
gtttttataagagcagaaaaaaatggcttttgaAGGAGGAGGGAGGGCTG
TTTCCATATAAACAGCTCTTCGTGCGTGATTGTCCATATATTTACTGGAT
TATTCCTTCAGATAACGATGCTACAATGTAGTCGTCCAACACCAATTGGA
AGTATCAGACGATTGGCTGTCATCGCTATTTTCGCGTATGCTGCTTTCAA
ATTCTATGGTCGCGAAAATACACCaggtataatttttttcaaatcactTG
AATGAAATCAATAACTGCCACACGCATTTGTAACATCCGTCTGACCtagt
aaagattttttttccagcgGGGATGCAATAAGGATGTACACGAGGGCAGG
aagctataagcaaaaagctcgtacccaaaaattttaaaaatgtcaaaaaa
tgaaggtcttcaaatctctctaaaacctatttttatgggAAGCTATGGTA
TTTTGTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNTCAAAATTCCcctatcttttcgtcaattg
tacttgaattgagatttctttgcttgaaaattcttcaaataggtAGAGTA
TATCAGAATATGcaaaaaataaagtcaaaaatgCAGAATTACAATGAACT
AGAAGTCCTGCAAggtggattttctcatttttgatcaaaatgtttcgtag
actaattttggaaaaacccgggtttttttttaggattcaGCTCATGTTTT
AGCtttctaagtttatttttctcattctagtatatatttctgacaacttt
acattaaaattataatatttcttacaaattcaggaaaataattacatatt
tctcatttatgatttttagcgtttaatcacttttttggccaaaaatgggT
AATTTTTCGgccgaaatccaaaaaaaccggaatattaacttgaaaataac
cctatcatgttatatatcagtggaagcggaattttgagtagattttgaat
atccaagtttcatgtcctgaaaaagaactcaactcaaattattatgcttt
aacagctaaaaatagacatggatgggtacgagctttttgcttatggctag
gacttcaaattttattttttcctttcaaacattatatacagtaaaaaaat
cactaaaaagtcCAACCTTTAGGATCCGCACATTTACAATAattttttct
gacttgaaaaggctcgtccacccccatgtacgttTTTTATTGGAACAGCC
CATTAGGttatgaaaaagtttttttggaaaaaactcAAGTTGTAGGCAAA
ACTCCTAACCCAAAAAATAAGCAACAAATTTACGATTTCTCAAAGTTGAA
TTTAATCAGCAAAAGAGTATTCCACAACACTCCACAACAAGTCTTGTACT
CAAACATATAAAAAATGCAGGCTTTCAAAGTTAAAAGTTCTGTCAGTTAG
AGTAGGATTGTCACAGGATTTTGAACTTCAAAATCATATCTTTTTGTGTG
TTTTCAAGAGTGCACgttcattttataagaacaaactatataagaacata
aggcttcgatggaaaaaatgttaagaacaagttaagaacattttaaggct
ttgtggattcaaaaatacctttttcttaggaaaatggtcaaaaatatatt
cacaaaattgtcacaataagaacatgttaagaatttttttaggcttaaaa
actctaaatgttaagaacatccaaaggctgcaaaagttttggatgttctt
ataaaaaacgtgtatacagggggggcacgcagttactacaagacagtatg
acacttactaccgtggtggtactgtattcagaagttatgaaaacagttac
tacacagtgtagtaactgctgtttgggggtggtgccaaacactaacggta
gcacttttggtgtagtaagtgcttatattttaattctttttaaagaactt
tcaaaatttttcaccaaaaatgaatttttttgtgaaaaaattctttgtta
aaaaaaatatttgttataaatggacgaaaaaaaatttgattaatttttct
cagactcaactttgaaattatgctttccctaattatcattaaaatgttct
caacctGTCTCAACAGCTGtaaaccaagtaaattaaaagaaaatctagca
caaaaatggctttaggttgaaaaataatcgcaatttagggtaatttcgag
catgtttttgatgatatcactcaaaaaCAGGGGTGGTACCTGGAAATCTt
ttctgaaaacagttactcccaaggtgtagtaactgcaaagggtggtggtc
ctgaaaaaaagtgttgaaaaagcacttactacacatcatgtcttgtagta
actgcgtgccccccctggTGTATAAGACTTGTTGTAGTATATGTGTACTA
CGGCTTTTTTATGTTCACCTCTTATGTTTTCTTTTCTACACAAGATTACA
CAAGCAAATCACACGGTGCAACTAGTCGTCACCTACTGAGCGCTTTCGAA
TGGGAACAATGCAACTTTGAGATCGGTCATACACGGAACTATTCGAATCC
AGACTCTTGGTATTCACCAGCGTCTGCTAAAGGATGGGTTGCTTTGTATT
GTATCCTTATTCTCATCGTGTTTGTTGGTaagatcaatttttgttatGGA
TTTTTGGAACAAACAGAATCATAGGCGTGTCACCTTTTGAAAATGTCACC
CACTCTAGGCCTCAGCAAAATCACGAACGTTCTTTCAGCGAAAAATGATT
TGACTACGATCTCTAGCTTTGAAAATATACATAGTGGATTGTTTTAGCGC
TTTATTCATGGTGTATACAGGActagaatttgaatttcttgaaaattaac
tcaaaatttccctcGAAAAAAAACCCTATGTATTCCTAGTAAAATGTTGA
GAAAACCTTGAGAAACATTATTTTCACAGCTGATCGTTAGCTTGGCTCCT
TTTCTATTCCCATTTTTCAGTCAAGATACAAATATATGGTTTCTTGTCAG
TAAAGCTCTCTCCAAATTAACTAATTTTGTTTGTAACATTTCAAACTTTT
GAGTGTCAGTGAAACTCGAGACGAGACATAAAGTCGGCAGAGATTCGGCT
GTTTAAATTAGAGATCACTGAATGTTGATTGTGTTCCATTCCGCTGGTCA
TACATTCCTTCAGTTCCTCCTCGACACCCATGCAACCTAATTTAGGAATG
TGATTTAGCAATTAACGAGAATTTATCCTTGATCGTCAGCTCTTtccact
ttaatttttttttacttagaaCGTTTTCCTACCATCCTCCTTTAAACAAt
ccttttttcaaattgtttttttttggggggggggggggcattaaaaaaag
aaaacttttcgaAACGCTTTTCGCAAAAGATAAGTTTTTTCGTAACGTAT
TGGGGTTTTGTAATTTGAGATGCGTCACATTAgaaaatttatttactttt
tcccGTTCTGGATGCTCCGTGACTTATCAAGCATGCCCTCGCTAAATAAT
TGGGTtgcttttttacaattttattttctttttcaatattaTTGCGATTT
TATTCGGACAACGCTTTTtaagttttgtaatttttcaacaCATCTTTCTT
CAATCACCTATCAGGTAACATAGGATTTATACTTTCGTGGTTGATTCTTA
GACAATTTAACTTTGCGATAGAGCCTACTTCTGACTGATGCTTCCTGATG
ATTTTAAAGATCCAGTGAAATGGAGGATACCGCCATCTTAAaagttttca
ctttcttttcaattattattaaaacaccaaaacaagCAGTGAaatatatt
ccattataaaaatttataaaactagGATATAAAGACAGAAAAgtaattta
atgtttctaaactaACATACCTAATTTTTCATAATCAGAGTTTTCAAATT
AACTTggttcatataaaaaaatctaTCAAATATAACACTAAATATTGGAG
AGAATTAGCGGACACGCGATTTGTGAGTACGCTTGCACGAAgtgtgaaaa
ataattaaaatctttCCCGGCTGAAAATTTTTGCATCATTTTAATTTATG
TCAACACGATGTGTGCATTGACCCCAGTTTTATAACGATATTTTTTGGAC
AGCTCAGTCGATAGAGCGTTTGCACTAGTAATGAAAAAGTCGCGATTTCG
AATCTCACTTCAGTCCTCAGCTTGGTAGTTCGCTATTAGGGTCAATACGC
ACGTGTTGGCACTAAAAACAAAGTTGATTATAGTGTTGTATGTTTCAAAC
TATAAGGAATCCCGGAGATTAGATGAAATAAAACATTGAGCACTATCTGT
TGGAAAGGTaattcagaaaataaaaaataaaagttaaacattttacattt
taaattgCTGCCAATCAAATATATAAAAAGAGTCAAAAATCAATCGTTCA
ATTTAGGCCATCATAACGTCTTGTTAAATATTTGCCAACTTTGCCATAAA
CAATATCCAATAATGGAAACATCAGATAAGAGATGAAAGGTGCGNATATT
TGCCAACTTTGCCATAAACAATATCCAATAATGGAAACATCAGATAAACG
ATGAAAGGTGCAAAAGAAAGAAGTACAACATAATTGGCATTGTTGCCAAT
AACCTGATCTTTCGTAGATGTTTCCATTAAAATCGAAATgcaatttatca
aaattaaagCTTGTAAGCAGATTGACTCAACCATGTTTAAGCGGGTTAAA
TTGAATATTTGCGAGGTCTGGTGTATACCATAATGCAATAAAAGACAGGA
CGAAATTAACCATAGGCGATTTTCCGGACGAACGCTGAAGGTACAAACAA
AAGCCAAAACGGTTCGCGAGAAGAGGTACATGCACTCCCAACAAACAGCT
TGCTCCTTTCTTTGATCACGTGACTCTCTTAATCGGTATGGTTGAAACAG
GGTGTGAAGAATATGTTTAGCTATCTGTCCATTCATCTCTGTTGATCGGT
TTTGAGCTTCTGGTGTTTTGTGTTGCTTTAACAAAAAGACCAATGCACTG
AGTGGAAATGTTAGAATCAGGAGAAATTGGTTTGGAGTTATCCTACATTG
TCTTAACCATCTTGTTGCCTTGTACAGAGCAGGGATAAAGGGTATACACC
AAAAGAACAAGACGAAAAGAGAAGACGAGACGATTACGCTGTCGGTGGAG
AATGCCTTTGAAGCGTCCATGAAATGATATGAACTACCATTGATGGTGAC
TGGATGGATTAGCTGAAAGGATAATACGGTGATTGCAGTATGGCCGAAAC
ATAACAGTTGAATGTAAGCGCATTTGATACGGACAGGTAAGGGGATCTTG
TTAAAGGCTTTGGTATTTTCATCGATATAGACTATTTCCCTTCTCGGTTG
ATCATTTTGGAGTCTCCTGGTAGTAATATACTCGTAAAGGCCAATTCCAA
ATACTCCAACTGACAGACTAGCAAATGGTATAAACCATACAATGATCCTA
AAGATTTCAAGTTCCGTCATACTTTTCATTTCAAGGGGACAAGTGTTCCA
TTCGAGAGAAGGTATCTGCAACTTGATCGAGAAAATCGAGACGAGAATTT
CAGTTGGAATCAATTTCTTAAGTGATAAAGGGTTCTGAATCAATATCAGA
CCGAGGATCTGGTAAAAGTTGAATATGATTTTCATCATTCCTTGGGTCGA
AAGTGGCATTGGGTTTCCAATGATATTATTTTGGTTCAGGTTATTTTCAG
CGACTAAAGGACGAAGCTCGTTAGTATTTTGATGGCAATCGAACGAATTA
TCATGGTTGTATTCTGTGTTGCTGCTCGCAGATGTTGAATTACAACCTCC
ATAATTTGGTTTCTCACNTGGTTGTATTCTGTGTTGCTGCTCGCAGATGT
TGAATTACAACCTCCATAATTTGGCTTCCCAACACTCACCAGTTTTGATG
ATTGTTCTCCATGGGCATTATGCCCGTCAAATCTTTGTTCGCCTTTTCGT
TTCCCTTCTATCTCCTTTCTTTCATGTCGCTGTCCTAAAACTTTTGCATT
ATCATTATGTTCCTTACGCCACTGTTTCTGCGTCAAATTCCTtacatttc
tttctttctttcgtcCCAAATgcgcaaaaacgtaaaaaactttttcagaa
aACATCAACATTAAAAGAACTATGAGTGAGTCagacaaaacaaaccaaat
aaTGCTAGCATTGCATTTCTCATTAGCAACACAACTATACTCGTTAAATA
TTGTGAAACTGTATCCAGATGGACAACTACTGCAAAGTTTGCCAACTCTG
TCGTTACGACAAGTATCATATGAGGTACAGTCCTTCATCGATTGACAACA
GTAGGTTGAAGGACATCTCTGGAAAGAGATTTCTCCTGTATTTTTGCCAA
CATATCCCCAATAATTTCCTTCACTTAGGACCCCTTTTTCCGTCCATACT
CCATCATCAGGACATTCAAATTGTGGTGCACTAGAAGTCTGAAAAGTTCC
TGTCCAAAATAATGTCGATGGTTGTGTTGAATACTTTCTTCCTTTCAAAG
ACAAGCAGAAATATTCAAAGTTCTTGTCATCATAAGAATATTTTACTTCC
GTGTTTTCTGGACACTCAAATACCAAACCTGTTCCTATATCAATAGTAGT
GTTTACAATTTTAACTCTAGAATATTGGTCAGTCCGAATGGCTTGCTGAG
AAATATTGATACCTCCAAGGTGGAAATATACTTCATGAAAGTGAATATAC
AATTTTCTATATCACCGTAGGTTGAAAATAACTGAATCGTCAAACCGTTG
AATATGCAATCGGTAATTACTAATTCAGAAATACCATATTCTGAGTCTTT
TATATGTAGAGCTGCTTTTTGAGAAGGTTGTTCGCTTTCAAAGATAAATG
ATACGATGCTTAAAGACTGAGTCTGTATCGCCATACATGTTTCATTAGCT
GTGGTCGTATTACATTTGATAATTGGCTGAACCCTTGAATCTAATGCTTC
TAAGGAGATTGAGAACTGGTCCGATGTATACTGTGATCCATTTCCAGCAT
TGACGTGGTAAACAAAGCGTTTGTTAAGGATCCACCATCTACTATCAAAT
GACATACACTTATATATTGTTGTACTAAACAATTCTTGAATGCGTATGTG
ATGGTGCGACAAGGTTCTGATCGCAATCCACAACCATCTTCATCATTTGC
ATTGGTGTCTTGTGAAACATGGATGTCACAGCATGGTGGGGTAGATACTG
GTAAATGGAAGTTGAAGCAAACTAGTTATTATCATTAATGAAATACTAGa
gttaaattatttttcctgTTCGATTTTTGGACACACTGTCCCTGTTTAAA
CCCTTGAATAGAGAATAGGTGATACATGCCCATATCCGAGTTTTAAGTAA
TTTCGTACTATGACTATCTTTTTATAACAGTGTCCATAATAAAAAGGCAT
AAGAAGATATTTCTCGTATTAGcatgagaaattttaaattgtgAACAAAG
GTTTTGGACTGTCGAACTTTATGAAGCTAAACTTGTTCGGATCAATATTT
TACAGAAAACAGCAAAATAAGTTTTTGATTACCTGTAAATGGCGAGAATA
ATAAAACCAACAGAAGGAGCATCAACATCATGCAGTTCAAAAGTTTACTA
AACATTAAACATACTCTTTTCCCTATGAAAACCTTGTCTAATGTGAAACT
ATTTGGTTTATTTTGCTTGAATAATGTTGACAATCAAAATATCCCATTTC
ATTATGCGTGTTGGAACCTATTTCCCTTGTATTCAGAGATTTAAGTCAAA
GTATAAAAAATGGTTCATTTCACCGTCCCTGTTGTCTCCTAAACATTCAT
TTTAAGGCATTCTTTCAGATAGCCTTTTTGTTGGTTTACTAAAGAAAGAG
CCTTTAAAAATGCCACCAGAGAATTACTTATCCTATTATTTGTGGCCCGG
GGTTCACTTTAGCTCTCTTATAGACTGGATAGCGCGATTAAAGTGGCCCG
GTGGTATACACTCTTTTATAAGGACACATACAAGGctaaatatttgttaa
aacctaaaaacaacCTGACGCTCAGCTCTAGTGAATGTTTTAGAACAAGA
TAAATAGGACCAAGTCTGAATCAAAAATATAGAAATTAAAGGAATAGTGT
ATTGCtacgcaaatcaaaatattatggtcacgtgtctggaatttgattgg
tcgagcgcgataaaagtttacaatttgattggtcNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNttttttgttttcctgtg
ttctttgtgtttcatcaagagcagatgaacaaaataacaaatagtaaata
aagcataaaacattttttgaaaaaaataacatgacattacaaaattcctg
tatatacaattggattttgaaaactatataaagtatttacaaattcttta
tggcttcacttttatcaaaagtgatgcaaaagtatttgaataataatatg
acctcctctttgaaattgccttccaaaatatttctttccattcaaaaaaa
aattctcaattaaagcaccctcagaatttttcacacaGTAGCACTTCATA
GGGAAAACTGTTGCtgaaaaaatacttccttttttagcagaaaatgtttt
taatatcttaaaattttatcattgagtatatgtatttatcgtcacttcat
acaacatcagtcacaatattccacattcactcaagttaacaacgtaaata
aaatgtaaacagttcttcttacagCAGCATATCCATACCACTGTAAACCA
TGTAAAAAAATGCAGCTATGTCCATCCATCACGAAACAAACTGGTACATG
AAAAATACGTTCAACTGTTCCCAAATCATAGCATGTACGAGGACTTTCAA
AAAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNTGCCAGAAGCACAAGAAGACAAAGTCCCTTGATC
GATGGtttgatcttaattttcaatgatagtcacaggattttaaatttaat
caaatcaatgtgtcctacttcctcaacattatttcataaaattccaaatc
agtacTATATGATGCTCAGAACCAGACAGAGTCTTTCATTCATCGTAGAG
ttacttttcacttcattttatttggttcgtgcaaaatctcatgatacagt
gcttttatcgagaaaataatatccACATTCCATGATTATATCGAAACGAA
GTATTCCGAAGTTATGTAGACTACAGTCTccagagttgatttttcaagtc
attggatgaacgaaaatgtcccatattttgaagtacgaaccatgaaaatc
ttctttgaacaaggctttcttgtcttgatgagtttcattcacttctcaga
tccatatatGCACACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNagcatcatagaaaaataaacattgaaac
tttcCATAATGATAGTTCAATAATAATATGACCTATTTCAGTTAATATTA
ACACTGCTCAGCCACAAAATGATCAATGGAGGTCTCGTAAAGATTGCAGt
ttttctcaataaaaattttccagtCGCCATTTTCTTCTAGCTCGTTTTTT
GAGCAAGACTAGAATCTCGTTCGGTTTTCTCGCGCCCTTGACGGGAAATA
CTGATTCGGGTAGTTTTACTTTTTGCGGGAAAAACATGAGCGAGTTTCTT
TGCTGTCGAGTTCAACTGTAGCAATACACTATTCCTTTAACACCGTTACA
CACATGggtctgaaaatgaataaaaatgttctgaaCAAAATAAGACCTTT
TAAGCAcattaaagccttaaaatttcacaaaattaagaacagcccagctt
AAGCCAAAAAATTTTGGTTCTTATCAAAAAGCGCGTGGTTTTCGATTTTG
AACTTTTGCTTTGGTGTTGTAAAACAGCCCGATGaagaaatgtttttgtt
tgaaggTATTGCAAATCTCAGTTATGTTGGTTTGATGAAGTCTTAAAAAT
GAAAGGAAAAACTTTCTAACGcaagttcttttgtttttttagctTTGGCA
ATCATCTGTGATGACTTTTTCGTGCCTTCTCTGGAAGCGATCagtgaaaa
acttgatttaTCAGAAGATGTAGCAGGTGCCACCTTTATGGCGGCCGGCT
CTTCAGCGCCGGAACTTTTCACGTCAATTGTGGGTGTGACGGTCGAGAGT
GACGTCGGTGTCGGAACTATAGTTGGGTAAGTTTTAAATCATTCTTATTT
TGTTGAGTTTTTTTATCTCGAAAACTTATAAATAAACTGGTTGGTTTGTA
TTTGTAAAAAAGAGTTAATTTCTGAGTTACTTTATATTATGGCGTTTTTG
TTTCGCCTATAGGCAGTGTTGAAGGCAACCTTCAGAAATATTTCTGTTTT
AGCTCTTCAAGTAGAGGCGAGGACTGACGCCACCAATCTTACTAATATCG
TATAAAAAAGCATAGGTATAATTTGATAgcttctttcatttttataggAG
TGCCATATTCAATCTTCTTGGTATTGTTGCATTATCGGCAGCTTTTGCTG
GTCAGGTAAAAATAATTCTTAAAATCCAGTTGTTTCTATGTTTTTATTAA
GCTGTTTTTCGTGAAATTACTCGAAACCGAGAGGCTGGGTTCGCTCAGtc
aaaatcgggctcagtcaaAATGGGAAACGGGGACGTGGTATTAGTAAGAG
ACCCCGCGACGGTTGCAATTTCACTAAATTTCAAAGGGTGTATTCGACAG
GGTCGAGTGTGGTTATTTTCATCGCTCTTTAGGGAGtgttttatgaagaa
aaaagttATCATCTAGCAAGGTCGATATTTTCATCAGAACTTCTGGATTC
AAGATTTCGTCAGTTAGGGTCaaatgtctactaaaaaattaTATCTCACA
AGGCCAACTCCAGCAGTAGGTCCCCATCGCCCGAAGGTCTGCTCCTGCCT
CCTGGCTTATTGGTTTTCGGCCCAGTTCTCTTTTGCATTGTTCATGTTTT
ATTTCTTTAGGTTCTACATCTTGATTGGCGACCCTTGACGCGTGACGCTG
CATTTTACTGTTTTTCTATTTGCTTTTTCATCATCTTTGCATGGGATGGC
AAATTTGAAATCTACGAAAGTGTCATTTTACTGGCCCTCTATTTTCTGTA
CATCCTTCTGATGAAATTCAATCCGAAGTTGATGGAGAAGATGGCTCAAT
GGGGGTAAGGTGTGGCCGATTGTGTGTTCATATTGTCTACTGAAGCTGCC
GTTCTAAAGTAAAGTCTGCTCCAAATAAATGACAGTATGAACATTTCTTA
AGTTCTTGAGATGAACATGTATCATTAAAAGTAATATCTCTTTCGATTTA
AATCTTCATGATCGAATTTTCCTCCGTCCTTCTAGATCACGAAAAGTGGA
TCCTTCATCTGACAATAGCAACAAAAGCGATAAAGAAGATGGCACAGAAA
CGGTAACATAACTTTTACTAAATAGTTTGTTTATTgtaaggggggggggc
aagtGGGCAAATACAGATAGATGGATATACAGGATGACATAAAAAAATGT
TGATGAAAAGTAAGAATTCCAATATATTAGGTAGGTAGTACAGTTTGAAA
GATAGTTAACTAACTGATTGTCGGAAATGTCAGTGATTGTTCATATTTCG
Aagctcgaatgtctccttaacttggacggttgttaatttttcgaaaattt
cccaaccccccggaccttattaggaccccccctgtttattaatttttaag
aatactttcagctgtcaaagagaaggcc
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00056069-exon-scaffold_267-1491911889:29615..30119 | TCONS_00056069-exon-scaffold_267-1491911889:29615..30119 | Clytia hemisphaerica | exon |
| TCONS_00056069-exon-scaffold_267-1510915933:29615..30119 | TCONS_00056069-exon-scaffold_267-1510915933:29615..30119 | Clytia hemisphaerica | exon |
| TCONS_00056069-exon-scaffold_267-1575043694:29615..30119 | TCONS_00056069-exon-scaffold_267-1575043694:29615..30119 | Clytia hemisphaerica | exon |
| TCONS_00056069-exon-scaffold_267-1491911889:30826..30940 | TCONS_00056069-exon-scaffold_267-1491911889:30826..30940 | Clytia hemisphaerica | exon |
| TCONS_00056069-exon-scaffold_267-1510915933:30826..30940 | TCONS_00056069-exon-scaffold_267-1510915933:30826..30940 | Clytia hemisphaerica | exon |
| TCONS_00056069-exon-scaffold_267-1575043694:30826..30940 | TCONS_00056069-exon-scaffold_267-1575043694:30826..30940 | Clytia hemisphaerica | exon |
| TCONS_00056069-exon-scaffold_267-1491911889:33659..33841 | TCONS_00056069-exon-scaffold_267-1491911889:33659..33841 | Clytia hemisphaerica | exon |
| TCONS_00056069-exon-scaffold_267-1510915933:33659..33841 | TCONS_00056069-exon-scaffold_267-1510915933:33659..33841 | Clytia hemisphaerica | exon |
| TCONS_00056069-exon-scaffold_267-1575043694:33659..33841 | TCONS_00056069-exon-scaffold_267-1575043694:33659..33841 | Clytia hemisphaerica | exon |
| TCONS_00056069-exon-scaffold_267-1491911889:42857..43040 | TCONS_00056069-exon-scaffold_267-1491911889:42857..43040 | Clytia hemisphaerica | exon |
| TCONS_00056069-exon-scaffold_267-1510915933:42857..43040 | TCONS_00056069-exon-scaffold_267-1510915933:42857..43040 | Clytia hemisphaerica | exon |
| TCONS_00056069-exon-scaffold_267-1575043694:42857..43040 | TCONS_00056069-exon-scaffold_267-1575043694:42857..43040 | Clytia hemisphaerica | exon |
| TCONS_00056069-exon-scaffold_267-1491911889:43312..43369 | TCONS_00056069-exon-scaffold_267-1491911889:43312..43369 | Clytia hemisphaerica | exon |
| TCONS_00056069-exon-scaffold_267-1510915933:43312..43369 | TCONS_00056069-exon-scaffold_267-1510915933:43312..43369 | Clytia hemisphaerica | exon |
| TCONS_00056069-exon-scaffold_267-1575043694:43312..43369 | TCONS_00056069-exon-scaffold_267-1575043694:43312..43369 | Clytia hemisphaerica | exon |
| TCONS_00056069-exon-scaffold_267-1491911889:43825..44018 | TCONS_00056069-exon-scaffold_267-1491911889:43825..44018 | Clytia hemisphaerica | exon |
| TCONS_00056069-exon-scaffold_267-1510915933:43825..44018 | TCONS_00056069-exon-scaffold_267-1510915933:43825..44018 | Clytia hemisphaerica | exon |
| TCONS_00056069-exon-scaffold_267-1575043694:43825..44018 | TCONS_00056069-exon-scaffold_267-1575043694:43825..44018 | Clytia hemisphaerica | exon |
| TCONS_00056069-exon-scaffold_267-1491911889:44200..44592 | TCONS_00056069-exon-scaffold_267-1491911889:44200..44592 | Clytia hemisphaerica | exon |
| TCONS_00056069-exon-scaffold_267-1510915933:44200..44592 | TCONS_00056069-exon-scaffold_267-1510915933:44200..44592 | Clytia hemisphaerica | exon |
| TCONS_00056069-exon-scaffold_267-1575043694:44200..44592 | TCONS_00056069-exon-scaffold_267-1575043694:44200..44592 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_267 | supercontig | scaffold_267:29615..44592 + |
Blast
BLAST of TCONS_00056069 vs. Swiss-Prot (Human)
Match: NCKX3 (Sodium/potassium/calcium exchanger 3 OS=Homo sapiens GN=SLC24A3 PE=2 SV=4) HSP 1 Score: 127.487 bits (319), Expect = 4.537e-31 Identity = 85/152 (55.92%), Postives = 115/152 (75.66%), Query Frame = 2
Query: 755 KGWVALYCXXXXXXXXXXXXXCDDFFVPSLEAISEKLDLSEDVAGATFMAAGSSAPELFTSIVGVTV-ESDVGVGTIVGSAIFNLLGIVALSAAFAGQVLHLDWRPLTRDXXXXXXXXXXXXXXXWDGKFEIYESVXXXXXXXXXXXXMKFN 1207
+G V L+ + + +F ALAI+CDDFFVPSLE I E+L LSEDVAGATFMAAGSSAPELFTS++GV + + DVGVGTIVGSA+FN+L I+ + FAGQV+ L L RD+ +Y S+ I+F +D K +ES++L+ +Y +YI++MK+N
Sbjct: 107 QGAVVLHVLCAIYMFYALAIVCDDFFVPSLEKICERLHLSEDVAGATFMAAGSSAPELFTSVIGVFITKGDVGVGTIVGSAVFNILCIIGVCGLFAGQVVALSSWCLLRDSIYYTLSVIALIVFIYDEKVSWWESLVLVLMYLIYIVIMKYN 258
The following BLAST results are available for this feature:
|
