TCONS_00056101 (transcript) - C. hemisphaerica

Overview
NameTCONS_00056101
Unique NameTCONS_00056101
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length2451

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00056101 ID=TCONS_00056101|Name=TCONS_00056101|organism=Clytia hemisphaerica|type=transcript|length=2451bp
AAACAAGTTGCAGATCAAACCTCTGTAACAAATTCTAATACATTGACAAA
ATTAAAGGAAAAGCTtgagaataaaagaaaaagcgacAATGTTACTTTTT
CAAAGGCTGGACACCTCGATCAGTTCAAACATAATACAGAAGTTTTGGAG
AAAATTGATGATGCCATTGAAGCTATCGAAATGGACGTGGAAGGAATAAC
AACTGCTTTAAAGAAAGAGAGATTTTGGGAATTTGAGCAATCTTCCGAAA
GCGTCTCCGTTGCTGGtaagAACTTTAACGCCCCGTTGCAAGACGAATTT
ACTTCACATCACTGTCTCCGTTACAAATGTGTTTTACGTGTCAATGCCGC
TGTGCAACACCTTTGACGTGTCAATGCCCCTGTGCAACACAACTTTTGCG
TCAATGCCCCTGTGCAACGCACTTGAAGGAGCAATCGTTCTCGCTGTGCT
ACAACTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNCTTTGACGTGTCAATGCCCCTGTGCAACACAACTTTCGCG
TCAATGCCCCTGTGCAACGCACTTGAAGGAGCAATCGTTCTCCAGTTGAT
GATTGATTACTACCTTGAATTCAAGTTCGCAGACGTAAGGTAACATAATT
CTTGACTTAAATTATTGCACTTTAAATTTTCCGAAAGATAATTACGCTCC
AAGTTTGAAAGAGAAGTTAATGgcaattaaaaataaaagcCTCAAACGGA
AAGCCGAAAGTCTACCTACCCTATTAGAAGCAGCTTACGCAAAATCTACT
TTGAGAAAATACAAGCCAGCATGGGAGAAATGGGTATCTTGGGCCGACCC
CTTCGAAGAAATAAACAGTTGTCCTGCGGATCTACTTTACGTCGCCATCT
ACTTAAACGATATCACAAATTCTTTCGCAACTGAAGGCGCACTGACAGCA
GCAATCTTGGACATAGGGTGGGGACANCTTTACGTCGCCATCTACTTAAA
CGATCTCACAAATTCTTTCGCAACCGAAGGCGCACTGACAGCAGCAATCT
TGGGCATAAGGTGGGGACATTTGAATTCAGGTTTTGATTCTCCGACAGAT
CACCAACTTGTTAAGTTAGCACTCGAAGGAGGTAAACGCATCATTGCAGA
GAGGCGATCCCCATCAGACAGACACCGCCGAAAGGAGCCCTTGCCTTCAG
AGCTTATTAGAAACCTCGCAAAAACATATTTCACTTCAACAAATTTAGTC
GAAATTTGCTTTCTTCTCATGGTCATTCTAGAGGTTTTGCAGGACTTCTC
AGAATTAGCGAAATCCTTCAAATTCAGATAAAGGAAATCACTTTTGACAA
TTTCGGTGCAACAGCTTTTCTACCAAATTCAAAAACCGACCAAGTTCGTG
AAGGTAATATCGTTTTCATTAGCAAGACAGGAACAAAATGCTGCCCAATT
TACTGGCTTCGCAAATATTTGTCACTATCCAAATTAAATTACAAACCCGA
GGCTTACCTAATTCTTCATCTTTACAAAACAAAGAGAGGTCACAATGCCC
ATGGTCTTCTTCCGATATCCTACACGACCGCTTTGAAAACTTTCAACGAT
CATCTTTCAAAAGTAACCAATCCTTCCATTTACGGTTTGCACTCATTAAG
ATCAGGAGGTGCATCAGAGGCAGCAAACAATGGTATTTCGGACCGTCTCA
TTTCAAAACACGGTCGTTGGTCATCGAACACTAGCAGAAACACGTATATC
AAAGACAATGCCAAAAAGCGTTATAAATTTTCCGTTCTTTAGGGATTTAG
GCATTCCgacttcctttttctttctcgtgGTAATGCAAGCAAATACCAAA
CAAAAAGTAGAAACAACTATcgttttttattgtttgtttcattTCGAAAA
GGAGAAATAGTGGAGAAACGATGTTTCAAGCGAttgaaaaaagctggaaa
agcaggTTCGCACGGAAAATTAATTATGCATGCGCATCATTAAATCATAA
TTATGATTCGTATGTCTttaaatacaattcaaaattcTAAATCATCCTCG
CTATTGCATTCActcaaaatcatttcaatataCTTTAGCAAACTTCTNtt
aaatacaattcaaaattcTAAATCATCCTCGCTATTGCATTCACTCAAAT
CACATTTTAACATACTTTAGCAAACTTCTCcgaaatttccagattttctc
GTACTATATTTAACCATAAGCCCCTGTATACTCCGGTCAACctttcttta
cttttatgaCATTGGAACAATCGGACGAGCGCTTCTTCCTGGACTTCAAA
CAGATGATCAATTAATGTCTCAGACGATCAACCACCAAGGAATACAATAG
AATATACTAAAAGACGATCGATTACCAAAACAAACGCCGGTCATTGGAGA
TTGACGATCTTATCAACATTCACCACCGACAACTTATCAAACATGGAGTC
G
Run BLAST on NCBI

protein sequence of TCONS_00056101-protein

>TCONS_00056101-protein ID=TCONS_00056101-protein|Name=TCONS_00056101-protein|organism=Clytia hemisphaerica|type=polypeptide|length=203bp
MAIKNKSLKRKAESLPTLLEAAYAKSTLRKYKPAWEKWVSWADPFEEINS
CPADLLYVAIYLNDITNSFATEGALTAAILDIGWGXLYVAIYLNDLTNSF
ATEGALTAAILGIRWGHLNSGFDSPTDHQLVKLALEGGKRIIAERRSPSD
RHRRKEPLPSELIRNLAKTYFTSTNLVEICFLLMVILEVLQDFSELAKSF
KFR
Run BLAST on NCBI

transcript from alignment at scaffold_267:528931..542405-

Legend: exonfive_prime_UTRCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00056101 ID=TCONS_00056101|Name=TCONS_00056101|organism=Clytia hemisphaerica|type=transcript|length=13475bp|location=Sequence derived from alignment at scaffold_267:528931..542405- (Clytia hemisphaerica)
AAACAAGTTGCAGATCAAACCTCTGTAACAAATTCTAATACATTGACAAA
ATTAAAGGAAAAGCTTGAGAATAAAAGAAAAAGCGACAATGTTACTTTTT
CAAAGGCTGGACACCTCGATCAGTTCAAACATAATACAGAAGTTTTGGAG
AAAATTGATGATGCCATTGAAGCTATCGAAATGGACGTGGAAGGAATAAC
AACTGCTTTAAAGAAAGGTAAGCAATTACTTGAAACCAGGATAAATCATT
TAAGGATCGCCGATGCCTAACAGTTAAGGAATTTAAAGCTAATGAATTGA
CATCTGGGGAGGCAGAGGAGAAAAGACTAAAGAGGGCAATAAAAAATGCA
GAGATTGTTAAAGGCCGTTTTTATAAAAAACAAAAACTTTCCGAAGATTC
GGATTATAATAAAGTAATAAGAAATAGAACCGAACAAAGAAGTCGCATGG
ACGAAGTAGTATGCTACTCCTGTAAACGTGTCGGACATTACGTATCGCAC
TGTCCCTTTCCGAATATAGTATCGCCTTTGTCTCTCCCATACTCAACAAA
ATCACATTCATCGTCATCAAAAAATAAAAATTCGTCAAGTTATTCAAAAA
GCTCGAAAGACGGTAAAAGTACCTCTGGATAAAAATATTCGTTATCACTT
TAAATTTCACAGTCAAGTTGCTTACTAGTGTTGAAAAATTGAAGCGTTAT
AATTCAAACGACTTTCCTTAGTATTATTTTATCTTTTATGAACAATTGAA
TTTATTGTGTTTGATGTACTTTAATCAAAAGACAGTAATTTCAAATTTTG
TAACATCGTTGTTTTCCAAATAACTTTCGCCAATTTGATATCAAGTTTTT
GTTCGTTTTTTCGCTTCTCCAGAGAGATTTTGGGAATTTGAGCAATCTTC
CGAAAGCGTCTCCGTTGCTGGTAAGATAATGAAATTTTCGCACTTTTGGG
AAAAAGATTTGAAAGCATCAAAATTCGCCCTGGGTGTCGTACGTGAAGGC
TATAAAATACCCTTTGAATCAAACCCACCACCTTTTTACGCTAAGAACAA
TGCGTCCAGTTTAAAGAACGACCATTTTGTCGAAGACAGTATCAAAAAAC
TTTTGGAAGACAGCTGTATTGAAAAAGTAGCGGAGCCAACCTACTGCATC
AACCCCTTAACCGTAGCAGAAAAAGCTTAGGTTGGTATTAGATCTCAGAC
ACGTCAATAAATTCATCAAACCAAAAAAATTCAAATACGAAAATTTAAAA
CAAGCTTCAGAGTTAATCGACCAGAACGATTTTTTAATCACTTTCGACCT
CAAAAGTGGATACCATCATGTACCGATCAATCCTGTTTTTCGAATCTTTT
TGGGATTCGCATGGGAATTCGACGGTGAAATGCAATNATCAATCATATTT
TTCGAACCTTTTTGGGATTCGCATGGGAATTCGACGGTAAAATGCAATTT
TTTGTGTTCAAAGTTTTGCCATTTGGGTTAAATATAGCATGCTTAGTTTT
TACAAAGCTCATGCGACAATTAGTAAAGAGATGGCGTTCGATGGGAATTA
AATGCGCGAGGTATCTTGATGACGGTATAGCTGGGGATAGTTCACATTTT
TCTTTGATTCGATCAAGAGATAGGATGCTGCAAGACATGCAATCAGCTGG
TTTGACTGTAAACTTTGAAAAGTCGAGCCTCGAACCCGAAAAAAGAAAAA
CATGGCTAGGTTTCATAATCGAGACTGAAAAAATGAAATTTGAAGTCCCA
ATAACAAAAATTCTGAAAGTCCAAAACTTACTTTTAGAAGCTTTAAATTG
TGAATTTATTTCAGCTAGAGAAATTTCTAGAATAGCAGGAAATCTTATTT
CTATGGCACAAGCTATCGGGCCACTTGTTTATTTATTTACAAAGCAATTG
TACAAATTTGTCGAATCCAGTTTCTCTTGGGACAAAAAATGTCTCCTAAC
ATTTGATGTAAGACAAGAGCTCGTGTGCCAACGGCACACCACTGGAACCT
AATGTAAGTAGTTATGCGTGAGGATATGCGCATGCTAGTTTTTTAAAGTG
GGTGTGAGACTTGAAGTGTTCGAATTTGACTTCTGATTTTTTTTAATTTA
TATACTTGGATTTGCTTGTTTTTTGGATTATCATGGCAGAAAATCAAGTT
GCTCATGTTTACACAGAACAGGAACTCTCAAAGCTGAATAAAGACTCGTT
GATAAAAGTTGTACTACAACAGCAATCCATACAAGAACAGTTAAAAGTTT
TGAACACAAAAATTGAAAATTTTGAGAAAGTTGTCAATGAATCCAAAGCT
GTTGCTGCTGTAGCTCAAAACGTTTCCAATTTACTACAGGGAAGAGTTAG
GCAACTTGAATCGGACATTTTGAAAGCTGAACAATATAGCAGGAGGGAAT
GTTTGGACATTACTGGGGTGAGTGATGAGATCCAGGACGATGGGCTTGAA
GGTAAGGTCTGCGAGATCTTGGAAGGAATCAATGTCAATGTCAATGCTGA
ACAAGACATTCAGGCATGCCATAGGTATGGTAGACGGAAGAATGTTATAG
TCAAGTTTTCTAACAGGAAAATGGTTGCAAAAATCTTCAAAAATAAATCT
AACCTCCCAGCTAACATTTACATAAATGAAACTTTATGTCCTATGAACAA
GAAAATTCGTGGGCGATGTGGGATGCTAAAAAGTGCCAGTTTGATTCAAA
ATGTGGCCACAAGAAATGGTATGGTTAGAATTAAAAAACTGAACTCGAAT
GCATATGTTGACATTTTGCATGAAGATGATTTGACGGACGCTCTTCCTGA
CTTCAAATTTCCGTATTGATCAAAAACTCAAAACATAACTTATACATGTA
TAAAATGTATACTTTCTGTTTTTCTCTTGATCAAAAATATGTCTCAAAAT
CCGCTCTTTTTTTGTTTACATCTGAAATATTGTGAACTTTCGTGTTACAC
TTGACACATTAGTCATTATGACTAAGGTAATTAAATATTTTATTAAGTAT
GTTTTCAAGAATCTTTGGTCGTGTTCACACTACAGACCTTCCTTAATAAA
AATGTAGTTAGGAGAATCTTTTGTTGACTACAATACAGAACGTGCATTTA
ACAAAGAGTCGAACGCGTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNGAAAAAATTAGAAATAGTGCAAACG
GTGTTGTTGATGTGTAAGATGAATGCAGTTAATGAGTAAAACCATTAGAA
CAAATATGTTTGCGGATTTCAAGTGATGTACAGGGTGTCCCTAATTAAAG
TATCGAGTTTGAACATGCGATTGAGTAGAAAGTTTTATGTGCGTGTTCAC
AAAATTGTATTGTACCTCTTTTTTCTTTGTCATTACGATTAATTTATACG
TTGTAACTACCTTTTTGTAATAAGCCTGTGTGATGGAGAACGTTCTTATA
TTTTAGCGATAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGTAATA
AACCAGTGTATTCATCCATCATAAATCTCTTTGTTTAACTTTGATAGATT
TAATTAAGGAAACCTTCCAGTGTGAACGCGCCCTTTGTTCTATTATGATT
CTTTATGCATTAAGCATTTCTTTTCTCTTTTTACAACTTTTTCCGGGATT
ATCTTTTTCTTATTTTGTTTTAATTTTTGGCTTGGAGAGCATTAAGAGCA
AATTTCTTATGTAATGTTGTTTGATGGTTGTTGATAGGAGTTTGTCATGG
GGGTAAGTCTTAGTCAATACAGAGCATGCATCGGATATTTCAATATATTA
CGCTTAAAATATCGTATGCTTAACCCCTCCTGTAGTTTTTTCATCTTAAT
AAATTTCCCTTTTACACTCATATTCTTATGCCTTCTTTTGTCCGGAGATA
TTGAGGTTAACCCTGGGCCGGAGAGGAAAACCACGCTAAGCATTTGTCAT
TGGAATCTGAATAGCGTTTGGGTTGAAGATTCTATGGGAGATTTTATTAA
GATTAAACAACTTTCTGCATTTCTGAACATTCATAAATTCGACANNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NATAATTATGAGATCAAAAGATGCGACCATCCCTCTAATAATAAGAGAGG
TGGTGTTTGTATATATTATCGAGATCATCTAGGTCTCGATGTGAAACCAC
AACTTACTACTTTGGACGAATGTCTTGTAGCTGAGATGAAAACCGGTGCG
AACCGGTTCTTTTTTTGCGTCTGTTACCGTTCCCCCAGTCAGACTTCTGA
TGAGTTCGATGTTTTTTCTCGCAAATGGGAGGAGACTATAATAAATATCC
AGAATTTTTCTCCTACTGCTACAATCTTCCTTGGTGATTTCAATGTCAAG
AATTCTGACTGGTGGAGCGGTGACGTCACCGATCCTGGAGGTAGAGAAAT
TCAAAATTTAGCTACCCAGCATGGTCTGCAACAATTAATTGATGGGCCTA
CTCATCTCTTGATAATTCAACTTCTTGCATTGATCTAATTTTTTCATCAG
CTGATCATTTGATTCTGGATACTGGTATCCTCCCATCCTTGCACCCTAAG
TGCCATCACCAGATAACCTTTTGCAAGCTAAATTTTAAAATCCCCTTCAC
TCCATCTTATGAACGAAAGGTCTGGGACTTCTCCAGAGCAGAATCCGTTC
TAATACGAAGGGCTGTAGACATAGTTGACTGGGATAGGTGTTTTGAGGGT
ACTGATATGGATGGCAGGGTCTTCCTCTTGACTGAAACCATCATTAATAT
TATGTCAAACTTTGTGCCTAATAAAGTCATTACCATCAGGAATAAGGATG
CGGTATGGATGACGGCTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGATACTCGTG
GAGTGTTCCTTGATATTTCCAAAGCTTTTGACAGAGTTTGGCATGATGGT
TTAATTTTCAAACTTAAGTCATATGGTGTTTCTGGCTCCCTTCTTCTATT
AATCCATAATTTTCTTCACGGGAGACGGCAGCGGGTTGTTCTTGATGGTC
AAGCTTCTGAATGGACGGAAGTCTTGGCCGGTGTACCTCAGGGATCTATT
CTAGGACCCCTCTTTTTTTGATTTACATTAATGACCTCCCTGAAGGAATC
ATTTCCATGATCAAAATTTTTGCTGATGGCTCATCCTTGTTTTCGCTTAT
CCTAGACCATATTCGCTGTTCTCAAGAACTGAACAGTGGCATGCAGAAGA
TAAGTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNAGATATCGTATATGATCGTCCTGGTA
ATTCTACATTTTCTGAAAAAATCGAGTCTGTTCAATATGATGCTTGTCTT
GCAATTACTGGATGCTTCAGAGGAGCATCCAGAGAAAAAATTTACCTTGA
GCTAGGCTTTGAAAGCCTGGCAGACAGGCGATTAATTAGAAGACTCGTAT
TTTTTTATAAAATAATAAAAGGCTTTGCTCCTGCTTATCTTACGAATATT
CTTCCTCCCCAGAGAGGAAGAGCGCAATGCAGGGCGAAGGATAAAACCAA
CACTCGAGGTACCTTTCTGTAGAACCGGGCGTTATCGTGCTTCTTTCTTT
CCATTTTGCATAAATGAATGGAATAACCTCGGAGATCATATACGAAATCT
TCCCACTATTAAGTCTTTCAAGCAAGCTATTCTCCAATTCCTCAGACCCA
TTACTAACTCAGTTTTCAGAGCTAGCGACAACGATGGCGTTGATCTTCTT
AACCGATTAAGGGTTGGTTTCAGTCATCTTCGTGAGCATAAGTTCAGACA
TAATTTTGCAGACACAGTTGACCCCTTCTGCAACTGTCGACAAATTTCAG
TAGAAACAACGCAACATTTTCTGATGCATTGCTCTGATTACTGTAACGAC
AGACTTGTGATGTTCCACAGCCTTCTTCAACTTGACATAACCTTGTTTCC
ATTTAATCCCAAAACATTGTGTAGAATACTTCTTTATGGCGACCCCGATT
TTAGCATTGTCCAAAATCATGATATATTGAGCATAACGATCAAATTTATC
TGTGATACAAGTCGTTTTGGGGGACCGTTATTTTAGTCTTTACTCTAACT
GCTCTCCTAGCTCTTTTTGTTTTGTTTTTTCATTTCTGTTAGTATTTATC
CTCTGTAGTTAGTTTTTATTTTCCATTTATTAGTTTATTTATTAATTTAT
TGTTAGCTTAGTTTGGGTTCCTTCCTCCTGGCGGTATGATCTGGTGGTCC
TTTTGCGGGAGGTTAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNACGAATTTTGGAAAGACAATTTAGAAGTCACGAAGAGCTTTAGAATTA
ACACACAACCTGAAGTCACAAAAATCGTTTTTTCGGATGCAAGCGAAACC
GGTTACGGGGGTTATGTTGCGGAAAAACTCGGTAACATCATAGCGAAAGG
GAACTTTGACCGCGAACTTCTTGCAGTAAAATACATTTTGCTATCATTTC
CTAAAATCTTAGAAAACGNTCGACTTACCGCGAACTTCTTGCAGTAAAAT
ACATTTTGCTATCATTTCCTAAAATCTTAGAAAACGAAAACATTGAGTGG
TTTACCGACAACAATAATATATGTAGAATCATAAATCGAGGTAGCACAAA
GCAACACTTGCAAAATCTTGCAATCAAAATTTTAAACATTTGTTTATCGT
CCAACATCGAAATTTACCCTACTTGGATCCCTAGAGAGTTAAACGAAATT
GCCGATATAATTTCAAAGACCAACGATACAGACAACTGGTCAATTGACAA
TGAAACTTTTGATTGTATACTTAAAAACTACGGACAAATTACCATCGACC
GATTTTCAGACAATTTAAATAAAAAATGTTTTCGGTTTAACTCCAAAGAA
TATTGTCCTGGTACTTCTGCAGTTAATTCTTTTTCGTGCCACTGGGGAAA
CCATGAAATTAATTGGCTTTGTCCCCCTCAACATTAGTAGGCAAAACAAT
TAAACATTTAAGAAATTGTAAAGGTAAAGGCATACTATTTATCCCCTTGT
GGCCATCAGCATACTACTGGCCTTTATTGACATCAAACGGTTTCGAGTTT
GAACCTTTTGTAAAACATTTTCTAGTGCTTGATCCTTTCTTTTTCAATTA
TTCAAACACCGATTGTGTTTTTGACGGCTTTGCAAATTTTTACTCTTTGG
CGTTATTTATTGACATGTCCGCATAATATATTGTGCAAACTTATTGAGCA
AGATCTTAACAAATTCTTACTTTATTCTATTTTATGATGGTGACAACTTT
AACGCCCCGTTGCAAGACGAATTTACTTCACATCACTGTCTCCGTTACAA
ATGTGTTTTACGTGTCAATGCCGCTGTGCAACACCTTTGACGTGTCAATG
CCCCTGTGCAACACAACTTTTGCGTCAATGCCCCTGTGCAACGCACTTGA
AGGAGCAATCGTTCTCGCTGTGCTACAACTTNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTTGACGTGTCAATG
CCCCTGTGCAACACAACTTTCGCGTCAATGCCCCTGTGCAACGCACTTGA
AGGAGCAATCGTTCTCCAGTTGATGATTGATTACTACCTTGAATTCAAGT
TCGCAGACGTAAGGTAACATAATTCTTGACTTAAATTATTGCACTTTAAA
TTTTCCGAAAGATAATTACGCTCCAAGTTTGAAAGAGAAGTTAATGGCAA
TTAAAAATAAAAGCCTCAAACGGAAAGCCGAAAGTCTACCTACCCTATTA
GAAGCAGCTTACGCAAAATCTACTTTGAGAAAATACAAGCCAGCATGGGA
GAAATGGGTATCTTGGGCCGACCCCTTCGAAGAAATAAACAGTTGTCCTG
CGGATCTACTTTACGTCGCCATCTACTTAAACGATATCACAAATTCTTTC
GCAACTGAAGGCGCACTGACAGCAGCAATCTTGGACATAGGGTGGGGACA
NCTTTACGTCGCCATCTACTTAAACGATCTCACAAATTCTTTCGCAACCG
AAGGCGCACTGACAGCAGCAATCTTGGGCATAAGGTGGGGACATTTGAAT
TCAGGTTTTGATTCTCCGACAGATCACCAACTTGTTAAGTTAGCACTCGA
AGGAGGTAAACGCATCATTGCAGAGAGGCGATCCCCATCAGACAGACACC
GCCGAAAGGAGCCCTTGCCTTCAGAGCTTATTAGAAACCTCGCAAAAACA
TATTTCACTTCAACAAATTTAGTCGAAATTTGCTTTCTTCTCATGGTCAT
TCTAGAGGTTTTGCAGGACTTCTCAGAATTAGCGAAATCCTTCAAATTCA
GATAAAGGAAATCACTTTTGACAATTTCGGTGCAACAGCTTTTCTACCAA
ATTCAAAAACCGACCAAGTTCGTGAAGGTAATATCGTTTTCATTAGCAAG
ACAGGAACAAAATGCTGCCCAATTTACTGGCTTCGCAAATATTTGTCACT
ATCCAAATTAAATTACAAACCCGAGGCTTACCTAATTCTTCATCTTTACA
AAACAAAGAGAGGTCACAATGCCCATGGTCTTCTTCCGATATCCTACACG
ACCGCTTTGAAAACTTTCAACGATCATCTTTCAAAAGTAACCAATCCTTC
CATTTACGGTTTGCACTCATTAAGATCAGGAGGTGCATCAGAGGCAGCAA
ACAATGGTATTTCGGACCGTCTCATTTCAAAACACGGTCGTTGGTCATCG
AACACTAGCAGAAACACGTATATCAAAGACAATGCCAAAAAGCGTTATAA
ATTTTCCGTTCTTTAGGGATTTAGGCATTCCGACTTCCTTTTTCTTTCTC
GTGGTAATGCAAGCAAATACCAAACAAAAAGTAGAAACAACTATCGTTTT
TTATTGTTTGTTTCATTTCGAAAAGGAGAAATAGTGGAGAAACGATGTTT
CAAGCGATTGAAAAAAGCTGGAAAAGCAGGTTCGCACGGAAAATTAATTA
TGCATGCGCATCATTAAATCATAATTATGATTCGTATGTCTTTAAATACA
ATTCAAAATTCTAAATCATCCTCGCTATTGCATTCACTCAAAATCATTTC
AATATACTTTAGCAAACTTCTNTTAAATACAATTCAAAATTCTAAATCAT
CCTCGCTATTGCATTCACTCAAATCACATTTTAACATACTTTAGCAAACT
TCTCCGAAATTTCCAGATTTTCTCGTACTATATTTAACCATAAGCCCCTG
TATACTCCGGTCAACCTTTCTTTACTTTTATGACATTGGAACAATCGGAC
GAGCGCTTCTTCCTGGACTTCAAACAGATGATCAATTAATGTCTCAGACG
ATCAACCACCAAGGAATACAATAGAATATACTAAAAGACGATCGATTACC
AAAACAAACGCCGGTCATTGGAGATTGACGATCTTATCAACATTCACCAC
CGACAACTTATCAAACATGGAGTCG

Coding sequence (CDS) from alignment at scaffold_267:528931..542405-

>TCONS_00056101 ID=TCONS_00056101|Name=TCONS_00056101|organism=Clytia hemisphaerica|type=CDS|length=612bp|location=Sequence derived from alignment at scaffold_267:528931..542405- (Clytia hemisphaerica)
ATGGCAATTAAAAATAAAAGCCTCAAACGGAAAGCCGAAAGTCTACCTAC
CCTATTAGAAGCAGCTTACGCAAAATCTACTTTGAGAAAATACAAGCCAG
CATGGGAGAAATGGGTATCTTGGGCCGACCCCTTCGAAGAAATAAACAGT
TGTCCTGCGGATCTACTTTACGTCGCCATCTACTTAAACGATATCACAAA
TTCTTTCGCAACTGAAGGCGCACTGACAGCAGCAATCTTGGACATAGGGT
GGGGACANCTTTACGTCGCCATCTACTTAAACGATCTCACAAATTCTTTC
GCAACCGAAGGCGCACTGACAGCAGCAATCTTGGGCATAAGGTGGGGACA
TTTGAATTCAGGTTTTGATTCTCCGACAGATCACCAACTTGTTAAGTTAG
CACTCGAAGGAGGTAAACGCATCATTGCAGAGAGGCGATCCCCATCAGAC
AGACACCGCCGAAAGGAGCCCTTGCCTTCAGAGCTTATTAGAAACCTCGC
AAAAACATATTTCACTTCAACAAATTTAGTCGAAATTTGCTTTCTTCTCA
TGGTCATTCTAGAGGTTTTGCAGGACTTCTCAGAATTAGCGAAATCCTTC
AAATTCAGATAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_035305XLOC_035305Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00056101-exon-scaffold_267-1575043694:542189..542405TCONS_00056101-exon-scaffold_267-1575043694:542189..542405Clytia hemisphaericaexon
TCONS_00056101-exon-scaffold_267-1575043694:541481..541533TCONS_00056101-exon-scaffold_267-1575043694:541481..541533Clytia hemisphaericaexon
TCONS_00056101-exon-scaffold_267-1575043694:528931..531111TCONS_00056101-exon-scaffold_267-1575043694:528931..531111Clytia hemisphaericaexon
TCONS_00056101-exon-scaffold_267-1510915933:542189..542405TCONS_00056101-exon-scaffold_267-1510915933:542189..542405Clytia hemisphaericaexon
TCONS_00056101-exon-scaffold_267-1510915933:541481..541533TCONS_00056101-exon-scaffold_267-1510915933:541481..541533Clytia hemisphaericaexon
TCONS_00056101-exon-scaffold_267-1510915933:528931..531111TCONS_00056101-exon-scaffold_267-1510915933:528931..531111Clytia hemisphaericaexon
TCONS_00056101-exon-scaffold_267-1491911889:542189..542405TCONS_00056101-exon-scaffold_267-1491911889:542189..542405Clytia hemisphaericaexon
TCONS_00056101-exon-scaffold_267-1491911889:541481..541533TCONS_00056101-exon-scaffold_267-1491911889:541481..541533Clytia hemisphaericaexon
TCONS_00056101-exon-scaffold_267-1491911889:528931..531111TCONS_00056101-exon-scaffold_267-1491911889:528931..531111Clytia hemisphaericaexon
The following polypeptide feature(s) derives from this transcript:
Feature NameUnique NameSpeciesType
TCONS_00056101-proteinTCONS_00056101-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_267supercontigscaffold_267:528931..542405 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.092284	6.0735	7.60639e-06	2.76229e-05	0	0	0	0.13853	0.960264	0.487257	1.41991	2.28549	1.1792	3.98532	1.87984	0.881112	1.41005	0	1.12645	0	0	0	8.93162e-06	3.03468e-07	0	0.447479	0.674301	1.44957	0.293778	8.28115e-05
Annotated Terms
The following terms have been associated with this transcript:
Vocabulary: INTERPRO
TermDefinition
IPR010998Integrase_Lambda-type_N
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00056101 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
Match NameE-valueIdentityDescription
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