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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00056131 ID=TCONS_00056131|Name=TCONS_00056131|organism=Clytia hemisphaerica|type=transcript|length=1130bp
ATTTTAGCGGAAAAAGATATCGACACGCTAAAACGCTAGAATTTCTCTga
ttaaaataacatttttcaaaaaaattcaatttagtGGAAACTTAATCTGG
CTAGTTTCGACAAAAACGAAATTCCTCTAAGAAGGTAGTACTGAGTTATG
CTTTACCACCACCCCTACTTGCTCTTCCAAATTTCAGTACGCGAAATCCT
TACGCGCATAGCTCAAAATGTTTTGTCCATGTCGCCCATCTAAGGCCGTA
GATAGCCCCTTGTGTAATCAAAATTCGTGAAATTTTTAAATCCGAGCAAA
TATTTACAGTCGAAGCTGTTCGCGAGAAGAGCCGACTCGCCAATATTAAT
CCCCTTAGCCTTAATGTATTCCGTGTCAAAAAGTGGTAAAGAGACTAAAA
TTTCCTTAGTTAAGTGACtattttccccgaccaaaactttacCCGacttt
tttccccgataagggatttgccaaaaaaattgattatgcGGTTGGAGGAA
TCTTTTTTCTCATTCCTAGCCCCCCCCACAGTAAAGTTGCATTTTCGGCC
CACAGACAGAGTTTTTACCCGGATATGCGTTAATTTGATCATCCCCGGGC
CCCAGACGCTCGAATTTATCCCTGGACATCGATGGTTGGTTTATTTCCTG
ACAACCCCTCCCTTTGCACAATGTTCTTTTTCTGGGAAAGCCAAATGTAG
GGggctcctggaaaatttgatgtgttTTATTCGAATTTTTTCTGAGAAAG
CCACAATGTAGGGggctcctggaaaatttgatgtgttTTATTCGAAGACG
CTGCTGGATTTGCCGAACAGACTTATtgctggaaaatttgatgtgtttta
ttttcaaacgcTCCTGGATTTTCCGAACAGATATTTTAATCAAATTGGAG
ACTATCCCTGTGATAAAATTCGAACCCTCCTGGATTTTCACGTCTGTTCT
CTGAGCATATTGTCTCtggattttctccaaaaattccCGCTGCTGGAAAA
TTATACCAGACTTTTCGAAAATATccgccggtggctgctcttgtaGCTTC
AGTTTCCACTCCTGAGAGAAGGTTTTGTGCTTCTTGCAAAGTATCGAGTG
TGAGTGCTATGTCATCTACAAAGTCCAGGT Run BLAST on NCBI transcript from alignment at scaffold_267:402297..403426 Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00056131 ID=TCONS_00056131|Name=TCONS_00056131|organism=Clytia hemisphaerica|type=transcript|length=1130bp|location=Sequence derived from alignment at scaffold_267:402297..403426 (Clytia hemisphaerica)
ACCTGGACTTTGTAGATGACATAGCACTCACACTCGATACTTTGCAAGAA
GCACAAAACCTTCTCTCAGGAGTGGAAACTGAAGCtacaagagcagccac
cggcggATATTTTCGAAAAGTCTGGTATAATTTTCCAGCAGCGggaattt
ttggagaaaatccaGAGACAATATGCTCAGAGAACAGACGTGAAAATCCA
GGAGGGTTCGAATTTTATCACAGGGATAGTCTCCAATTTGATTAAAATAT
CTGTTCGGAAAATCCAGGAgcgtttgaaaataaaacacatcaaattttcc
agcaATAAGTCTGTTCGGCAAATCCAGCAGCGTCTTCGAATAAaacacat
caaattttccaggagccCCCTACATTGTGGCTTTCTCAGAAAAAATTCGA
ATAAaacacatcaaattttccaggagccCCCTACATTTGGCTTTCCCAGA
AAAAGAACATTGTGCAAAGGGAGGGGTTGTCAGGAAATAAACCAACCATC
GATGTCCAGGGATAAATTCGAGCGTCTGGGGCCCGGGGATGATCAAATTA
ACGCATATCCGGGTAAAAACTCTGTCTGTGGGCCGAAAATGCAACTTTAC
TGTGGGGGGGGCTAGGAATGAGAAAAAAGATTCCTCCAACCgcataatca
atttttttggcaaatcccttatcggggaaaaaagtCGGgtaaagttttgg
tcggggaaaataGTCACTTAACTAAGGAAATTTTAGTCTCTTTACCACTT
TTTGACACGGAATACATTAAGGCTAAGGGGATTAATATTGGCGAGTCGGC
TCTTCTCGCGAACAGCTTCGACTGTAAATATTTGCTCGGATTTAAAAATT
TCACGAATTTTGATTACACAAGGGGCTATCTACGGCCTTAGATGGGCGAC
ATGGACAAAACATTTTGAGCTATGCGCGTAAGGATTTCGCGTACTGAAAT
TTGGAAGAGCAAGTAGGGGTGGTGGTAAAGCATAACTCAGTACTACCTTC
TTAGAGGAATTTCGTTTTTGTCGAAACTAGCCAGATTAAGTTTCCactaa
attgaatttttttgaaaaatgttattttaatcAGAGAAATTCTAGCGTTT
TAGCGTGTCGATATCTTTTTCCGCTAAAAT
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00056131-exon-scaffold_267-1491911889:402297..403426 | TCONS_00056131-exon-scaffold_267-1491911889:402297..403426 | Clytia hemisphaerica | exon |
| TCONS_00056131-exon-scaffold_267-1510915933:402297..403426 | TCONS_00056131-exon-scaffold_267-1510915933:402297..403426 | Clytia hemisphaerica | exon |
| TCONS_00056131-exon-scaffold_267-1575043694:402297..403426 | TCONS_00056131-exon-scaffold_267-1575043694:402297..403426 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_267 | supercontig | scaffold_267:402297..403426 . |
Blast
The following BLAST results are available for this feature:
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