TCONS_00056348 (transcript) - C. hemisphaerica

Overview
NameTCONS_00056348
Unique NameTCONS_00056348
Typetranscript
OrganismClytia hemisphaerica (Jellyfish)
Sequence length3235

Sequence
The following sequences are available for this feature:

transcript sequence

>TCONS_00056348 ID=TCONS_00056348|Name=TCONS_00056348|organism=Clytia hemisphaerica|type=transcript|length=3235bp
GATCGGATTTACAACAGGGcggcactttcactttcacttttcgataaaaa
agtgaccaaaaaactgcaaaaaagtTGACTGGTGACAATCTCAATATCAA
TCACTCTCTCATCTCTCACTATCATCAGTGACAGTGTTGCCTGGACTGTT
ATCCCTCGTTATCCCTCTCTCTTCTTGGCGTTTTGTCATTGAAAACAAAC
GACCAAGCAAACATACACTCAAGAATGGCTTCAACAAACAAAGAACCGTT
ACCCACAGATGAGAGAAAGGTACAACATTCATCCATCGATAGTCGAAACA
ACTCCTTTGACTCTCTCTACCCTGATGGCGATGATCATGGTCTGATGGCA
TCAATCGAAAGTCATGGCTCGTTATGGAGGCAATATTCCCTTATCAACAA
GAAATACCAAGACAATATCAAGTCACAAGATCTATGTTTCTGTTGCGACA
GTGATTCTTTTCGCCATGGAACTTTGAAAACATTATTTCTGCTTGTGGTT
GCATTTGGATTAATTTGCtctttttttgctttgagattATCTGTTTTCTC
AACTCAAAGTGTAACTCTTACAGGAGGTGATCAAAAACTGGTTCCCATCT
CCACTTATTTCAATAAAGGTCTTAAACTAAAGGAGAGTTGTAATCAGGTC
ACCCAGGAAGGCAGCAAATTATATTTGTTACCAGAATCACCACAAATATC
AGCAGAACGTAAAATTTACACCGAAGCTGTACAATTTCTCATGCCATCTT
GGTCTTATCAATATTGGGGCTTTAGACTCTTGAAAGGAACAGAGCTGACT
ATTTCAATATGTGCTGATCTTCACTTACAGTTTTATCTCATTAAAGGTGA
AAGAAAGCTGAAATCATGGAAAGAAACGACTCTTTTCAACGATTATGACT
TCCAAAGCAATATACGTCCAAAGGAAAGCTGCTCTAAGAAGGAAAACCTT
AAAAGTCACTCAGTACAAGTTCATGAGAGCgatattttctatattttgtt
CTCGAGTTCAGTAGGCTGGCGTTTTTTCACTGAAGTCACTACCGTCTTGC
AATTCAACCGAACAGTATATGATACGTCACAAAGCTATTATTCTTGCTTA
CTATCAAATAGTTCTTGCATTGGAGAACTTCATCATGGTTCAGAGGACAT
TGCTTTAGTTGAAACAGAACTAGACATCAATCATCCAACGACTTCATTCA
AGAATTACAAAATCTCTTACGAACCTTTACCGAGAAACGAAttctatttt
aaattgtttGGTTTTGTATATTTGACTGTTGTCTTAGCAACCGTACTGTA
CTCTGTATGGCGCTTTTGTGTCACAATCCACGGGAAAGGTCGGAAAGAGC
CAGGAACAAGTGAAGAGCGTAAACCACTGCTCAAAAACACGAAACCGCAC
TCATACTCGTTGAGGAGTCACCCAGGCGGTAAAGATCAATGGCTCGTTGT
CAACCGCTCAAGTGGAGAATCAAACGACTTACGTATAGACGAGCGAGAAA
CATCGTCCGTTCTTGAAGAATCTGTTTCGCCGTCACGTCATCGTCTTATT
ACGACGACGTCAAATTATTCGACATACAGCAACGAATCTGAACAGTCGTT
ATTTATGAACAGACGTGGTACGAACAATGCTGATATGATGCGTGCTATGC
AACAAAACATGGAACAACAGCAGCTCTTGGATTCTGTCATGACGTCTGCA
GGTGTCAGTGCTATTTGATTTACTTCTAATCTAACGAATTATCAAAATGC
GTAATGTTAAGATTACCGCCCTAaccgcacgatgggttattttttctctt
ttgacgccttcaaagagagcaattaatcgttaattgaattaagagagcaa
ttaatcgttaatcacactcttcaacgaggtgccaatgtttacaaaatata
GTTTAATGTTCTTTCTTtcgtttttttgacttttttgaaagttttcgtTC
TAATATTTGTGTCGTCACAAGCAATTTGAAGTACAAATAAAATGTAACGT
TCTCGGACGTTCCATAGCGTTCATGGAACGTTCCAGATCGTGCTTAATCG
TTCTCAAACGTTTCAGAACATTCAGTAACGCTTAAGAACGTTGGAACGTT
CATGAACGCTCTCGAACGATCATATGCGTCAAAAGGTTAATAATGAACTC
GATAAGAACGTTCTTGAACTTTTTAGAATGTCCCTAAACGTTCCAAGACA
TTCCTACACTAGTAAATAATAGGGAACGCTTAGGAACGTTCAGGAACGTT
CAATAACGTTCCATATCGTTCGTTTTACTGGAACGTatcattttatttgt
atttaAAGTTGTTTATGATGACAATTTTTGTGCGATAATGATAACCGGTT
GTAATGGAGATTCGTATTTATACCACCTTCACACGTCATTACATGTTACT
TACGGAATCAACCAATAGAACGAATTCGTTTTGAGTTGGTACGAATGATT
GTAAAAGGTATTTCTGTATAGGGAGCATATCTATAAGGTTTGcgaccaat
gaagtaaaagcccgaaggactagaatcgaatctttaacctttctcaggca
agaaaaagtgaagccttaaaatatgcgccgtatttttgacgacggattga
atctagcgattcctTTATTTTAGAGtgatatcttttttcaaatttaggtg
taaattttagtttcaatctgtcatttctGTAAAAGCCAGGCGGACCGcgc
taggccgcgcaactttgttaGGATTTGGTAGGCTttaaatcctaccaagg
agattcgattctagctcttcgggcttatacttcgagatgccttggagttt
ttacaagatacttcactaattggtcacttaaagtgatagagatgacgcgt
tctttagaaaaagtaataagattcttttattacatcttaacgaccaacca
aatcaaataagagcttgtaaaaactccagcttgtccctatACTTCATTGT
TTGCGACTCAGACTTGGAGTGTATCAACTGTACACATGAAATGTGAACCT
CTGTGAACCAAATATGAAATTTATAATGTTGCCGTAAGTAaggaagaaaa
gacactttttttattttttgttactgTTAAATTTTTTAAACCATAACTTT
ATATTGGAATATTTTGCTAGATTTTTAGCGCTCAATTTTTTGGAGTAATA
TTTTCTAAGCAGTgtgtattttattttctaattacATACCTATAATAGat
aaatttttaaagttaatTTATTCAAGAATCATGAC
Run BLAST on NCBI

transcript from alignment at scaffold_273:80009..93876+

Legend: exon
Hold the cursor over a type above to highlight its positions in the sequence below.
>TCONS_00056348 ID=TCONS_00056348|Name=TCONS_00056348|organism=Clytia hemisphaerica|type=transcript|length=13868bp|location=Sequence derived from alignment at scaffold_273:80009..93876+ (Clytia hemisphaerica)
GATCGGATTTACAACAGGGcggcactttcactttcacttttcgataaaaa agtgaccaaaaaactgcaaaaaagtTGACTGGTGACAATCTCAATATCAA TCACTCTCTCATCTCTCACTATCATCAGTGACAGTGTTGCCTGGACTGTT ATCCCTCGTTATCCCTCTCTCTTCTTGGCGTTTTGTCATTGGTAAGTTTT TTATGGCGATCTTCTCTCAGCTCAGCACCTCTCAGTATCATATGATCAGA TTACCGTACCATTGTACCCTCTCAACTCATTGTCATTCGCTGAAGTTGGG CGTTGACCGGGGTATTATCTAAATACCAACGACAATCCTATCAAAAGGGG TctaaatatttaatttcttttaaccatattttaaCGGTTTTTTAGAAcgt gttaaaaatcacttgctccggaccagtatggatttcgtgtaactaacgcc tggcgcattggcgtaagggtacttacaaagattgtttgattttcagttgg cgtatagtaataattccagctcagcgtgaatgactccataatccatcgat ttttagcttccatttggctaaatttgctttcgctcGCTTGCGCTCacgtc aatttattaattatgttggcgcatgcgcctcttttcccatcttgcaccct tattgaaaaatNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNtattgaaaaattgaatgttggtacaaaagaaattttgct tggcgtgaggcttgctgcacggaaaaatatctttggcgcaagatttcgtg gaatccatactgggCTCCGGAAGCGCCGGAAGAGCTCGGGAACTTTCTGG AGagaaaaatagtattttttgagCTGCTCCGGAAAACTTCGGAAGTTTCT GGAGCGCCAATAGGGTCCTTTAgagtaaaaataaataatagtcCTCATTC GTCATTAGGCCTAAAAGGCAAGGCAGTCAGGCCAGGGCCTCCTTGgtctt ttttaatatttactgtaggatcgtctaatatcgacatgcgtcttctaatA TAATTTTGATACCGGATttgtaaaattctcaaaacaaaccttgaatgaaa ttcttggtatcattcttatcgaaaaagtccatccatcaaactagatgtag aagttcagtaaacattgcaattctttcaataaaaaaaaacagccaaatta tataaGCAGTTTCACACAACACacaaaacgcatgcaaacttcctcgtaac tttctcgtgtccatcattaaaattttacaactttatcacgcttcaagtca cgtgataaaaataatttgcgcgctTAGTCAACCTGGTTTCCCCGTCCGTA TTGTTTATTGCAAGCACGCGCTCTAGGTGCTAAGAGGCCGCGTTAAACTT TCTAGGCCCCCCGCACCTAGCACGcccggtcccttttcaaattcaaaagg aaaccgggttctttaattattttcggttcacggtaaaaaggtctactaaa aaaatTCCTTGcatgcaaaatgttgttgtgatttgggcatcttcgttgaa agcatgctaattagttttttagtgattactacatcgttaaagttttcttt tcaaatataagtaattaACACTTCacttttctcatattatattaacaatc tgtgacgtgatagggagagtacaatttagtgattgattgataacgttggt atgtatttgtttatgtttgattttttatttcgaagaccagcctacagcta tgtcgataTTAGATGATCCTACGGTAGtttggatagaataaaaacatacc tgatcaacacaaccaaaccttctgtcttgcgtttactctttccttcccaa taactttcgtttttgcttaaatgtaggttttaaaatccacaactaatgaa cctcttatagctttatccaAATAAATatggttgaaaaccttctgtcaggt ttcattccgtacgttttttatccacgtggtgaagcGGTTCCCCTGATTTC CCGATATtcaaaaattggaactttcccgtgggcgcgattgggcgtttata ttttttgtgaaaatttaccgtattttaatgctaatataatctagatagga aagaaatattaaatttgattctttttttgttcgtatttctaaatttcacg ataaaaagaattatttacaaattattttctttaacaggcgttgaatcgac attgacatatttaatgatgtcataatcaatgccgtgcatattttgtcagc gccgtgcatattatgtcaacatccttttcatttggataaataccactaaa atatacgagagaagtaaacataaatttatcacccgcgagcacggcttagc taagcacacctctcttattcattatctaagaattggaacgggcaaagatt accgcgcgggctgatagcggacaaaggttatttgaagatattttcagtta taatcaaAGGtcgaacaaactaaacatagaaagggggtattttttagtgc tccaTACGATGATAGCCTAGATATCTAAGCTAGTTTTCAGTCACTTGCTA TAAAATATGAaagttaagttgtgactgaaatACTGGCTTAGGAGCAGTAG AACTCGGtgcttatcaactgacaacaacgacaGTTCAAAATTCGCGCGAA CAGTGACGTAATTACAcataatttgtaaaatttgtataatttatTCGGCC GaaagtttgaaagtttttttatgaaCAACAGCCTAGAAATATTTCATCAC ACACaagaataaaaacataacatattgttttgaagaaaaaaaaacacaat ttgatTGGACACATTAAAAAAAGTGCTGCTCtttgattggttaatttcaA CTCCAAACAATAAAaccaaaattcttttatttgattacgaaaaaaacaaa cacttcatcggtttgttttttctctcttcgctattgaaaagtaatacatT TGTTTTATTTGTGACCCGAGAAGAAGAGTGTGTGTGTAGAATGGAAAATt gtgtttcttatttttctgaaaaaagactTCTGAGAGAAAAAACGCTCTTT TGGAGTGAAATATGTTGTGATTTGTTTTGAATGTAAATTCtacaaaaata ttacaaaacaaaccaaaatacacccaaatataatataaaaattatTACGA AAAAATCTTTGCTTCAATATATCGAATCTTCATTATATATAGGATCTGCG ACAATTattgtctttaaaaaattgtttttcaaaaacattttgttaacCCA AAAACTATATTGCAGCAAAAACCATTAATGTCAtcatcaaataaattttt ttatcgtTCAACAAACACACATGAAGCTGGAACATTATtccctagcctgg gaatccaagctgaTAGTTTATGTAATTGTACATACATAGTACAAATAACG GTTGGCTCTTTCATCTATTAAATTTGACACACAACAGTCGACATTGGGAT TCAGTCATGACCAAATAACGGAATTCATTCTGAAAAAGACACATGATAGC TCGAACACTTCTCTCCAAATACATAATCAGGTTTTCAGTTTGTCAGTCAT TTGGCCCATTTGGTCTCGTTTCTCCATTGGCattgatgaaaatatttaat ttgcTCCAAGTGTGTTTGTAGTCGAAGATCTCAGCACTCCATTATCACAA AACTCAAAGTCAAAGCACCAAAAGTTAAATTCAGcttcagaaaaacaaaa acttttttcacaaaccAGTTTTCCCTTCTcttgtttttttcgaaaataat taaaaaatcaacaacTTACGAAAAGTTTCGGCTTTTATACCACGTGACCG CCTCTGACCAATTAGAAGCCACAAAAAAACGACGTTCAGATTCTGAACGT CTACTGTTCTCAAGCCAGTTATTCAGCGCTAACTTAAATTTCACggatat aaaaaaatcaagcaCCGAGAACGCTATATCACCTTTATACAGAATCACGC GCTGTAATATCTGGCTTGATTAATCAGGCTAATACGATgattggtatttt ttttgaattctatgtttagatttttttacCAAGCCCTGTTGCTATGTACC GATCGccgcgtaatatcgataaagtgaaaattttgaaaaatattctaatt aTTGGGGCGTTGCAGTATAATATAGACCTAACtattcatacaaaaattac cgtcaactgctctaacttgggacgattggccattttcgatttgttcaatc atttccgatttgttcaatcatttctattacttttcgattaccttcgatca tattgaatacctttgattgtattgagtactttccagccttcgattttatc aaatatgtttccagtagcagcgcctcaaaataatctgaaaccatATTTAC TTCGGCCAATTAAAACACGTGATTCACACGCGAAAACCACTTTCGTCttc tccgaccaatcagaatgcgtgatatgagttacttgaggaaacccagggTG AAAGGCACACAAAAGGAAAAAGGTTGGGAAATAGTGgggcttctttttgt gctttggtttgGTTTAgtcagtttttttggtttttcttaaagatatgtca taccgtgaagtcgggtaacttgcatcagtggaggctaacatgcatagccc tcaaatgactgaccaatcaaagcagcaaagtttcaaaacaaatgaactat gcagctccggtcgcagctctactctaccatttttgtttcgatttaacttt gtattttaaggacaaGCCAGGTTCAGTGAGGTTCGGTGAattggtggcca aattgccgtcccatatTTTGTCAGATAGTTCCATATTAGAGCAGTTGAGG GTacgggaaacacatatttgtaccctatgctgcacgcaagcacttaagct aaagtctcgcaaaaggacaaaaatcagttttttgaagtttgcaaaaaaac ccCACTTAGAAGATCAAACAAAtccagtatgtgaatagagcagtaaaaaa tgcaacttgtctatttttctttctttttgcaaAAGGCCAGGCCTAATTGA TTGTTTAGTTCAAGTCCTAGAAGCTTTAAAATATGGGTCAGTCGGTCGGT AGCTAAAATTGTATCGATTAATAAGACAACAAATTACTTTTTCCAATATA GGTTTCATGGCAACCAGGGCAAACCGTTTTGTAGATCAAATTAGATTTGC TGATATTTTGGAGTTAGATCCTTTGAAGGAGAGACAAGGAGAGAGCATAG TGATTTTCTTCGTGTTATTTTTGATAATAAACATGACATTGGGTTTAGGG CAACAACAGAGTTTGTTAACCAGGTCATCAACAAGTTGTTTACCACGAAT TCCGAGATAAGGAACTTTAATTTACAACTTTTAACGTCATCAGAAACATC ATCTGTATCAGTTTTTGATTTCGGTTGCTCAGAAGTagatttttgtactt tttacaAAATGAGTACAGTCAGGTACAGTAACTAAAGTTTAGGTTAGAAG AAAATTTAAACCTGATTTCTTTAAATAACTGTTAAAAGGTTCTGGTGTTA TGTTTTCACAAATTAAAGTACTAGGCTTTAAAATTTTGGGCAGCAAAGGG ATatcctagcccaattggctacactgttttttagaccaacccattGTAAG GCGAATCCTCTCTGAGCTACCCATCCAGGATGTTTCATTAATTTGTAATC AGATCAATTGATACTGAAAGTTGTGAGTGCTCTTTTGACAGATCAAGATG CTGAGAGGGCGCTAATTGAAAGCGTCAATAGTTGCAAAAAAGAGCCTCAG GTAGGGGGGGtccaaaaatgactttttttggaaatttttatgtttaacca tcttttttaaataaatttttcatgctgattccgaatttgaaaTCCATTTT TCCACATCTCTTACCCCTGGGCGGCTATCGGAGAccccttttttcggaaa acCACCCAAAACAgctaaaagtcaatttttttaaattgacaatTTTGAAT AGCTTTCTAGTGATGtgatctttttaaaatcagtttttcatgctgattcc gaatttgaaaTTCGTTTTGTCACAACTCTCACCCTTGACCTGGTATTGGA GGCTaaggaaaattgataatttgaaaatgtttgaatttgaatgaaaaNTT GTTGTGTGTTTTTTCCCAAACGAATTCCAATTAGAGAAAAGCTTTATTTC GATTGGGATAAAAATGTGatctaaaatatattaaaaaacttACCGCTTAC AAGACTTCATCTTTCCTGACAAACACCGTAAACAAGCCAAGATTGGTCGC TCCCCGGGGGTCGCTCTCGCTGGAAGTAAACAANAAGACTTCATCTTTCC TGACAAACACCGTAAACAAGCCAAGATTGGTCGCTCTCGCTGGAAGTAAA CAAACACTGTAGTTAGTGTTATAGTTTGGAATGCAAATCTTCCTTTTACA AACTCTCCTGGTGTTAATTTTCATTGTGGTGCGAAGATTATACCAGATTG ATTGGAGGGCTTTTCCGAGGGCTTTACAATGTAATAGTCCAGATACACAA AAGGACGCCCAGAAAAGGAAGGTTTTTGTAAAccctttgataaaaataaa aggaaggttttaaaaattggaagcaAGCAACACAGTACAGACAGGtctta taaggaaaaaatcttcCCTTACATTAAAAAGACTTTGTAGTGATCATTCA CATCCTAAGGAAATATCAAGAATATATGCTTTGCAGCAACAACCATGTTT CTTTGTCATAAAAAATCCAACCATAAAAACATATAACATCNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNCGTTTCGccactcgtttccactcgt ttcaccactcgtttccacccgtttgcaTTCGTTTCCACTAGTTTCCCACC CGTTTCGGGGTTTAGTATCTACGATGAAAAATATAATGATAACAACTTGT TTTAGATCaaattttcatgctgattccgaatttcAAATCAGTTTTTGCAT ATCTCCTACCCCTTGCCTGCTACGGGGTCGGCTACATGAGGTTCTTTATT CAGATAATATCGCAAAAAAATGTGCAAAAATCGATATTCTTGAAAGGATA TTTCTGAGCTGTTAGTTCGTCTGTGGCTTTTTGACACTTGGCTAATGTTA TACATTCGTCGTCATAGTAGGGAGTTTTGAGTACTTTTTTCAATGAGCTA ATCCTGTGTACTGCTGCTATAAGTTTATCTGCTGAACTAGTCATGAAGCA AAAATCAACCTGCTTAGAATCTCGTCTAAACTATCTTGAGCTAGTGAACT CCTTTGAAATACAATGATTCCCTACCCATTTAAACGTTGAAAAGTTGATA ATTGTTTTTAGGAAGCCTTAATTATTAAGGGTTAAGTTAAAATTAAAACC ACTAGGCTATACAGATAGCTAATTCATTTttcttgaggaatacagggtta ATCCATTTTCCTACAGGGTTCATCCATTTTCCTACAGGGTTCAtccattt tccttgaggaatacagaatttcttcattttccttgaggaatacagggttc attcgttttccttgaggaatacagggttcatccattttccttgaggaata caggatTCATTCGTTTTCCTTTAGGAATACAAGGCTCAtccattttcctt gaggaatacagggttcatgaaatttttcaaataattttaattcaaaCGAG TAACATTAGAACAGGTTTATAGTGAATAGTGAATCTATTGAAAGCTACCA ATGTATAAGAAATATAGCCTTATTCTAAAAAGTAACTTCCAAACAAATGG ACCAACATGAAAGCATTTACAGGGTTGTATCCCTGAAAAGGAGGGACGTT TTACTACTTGAAAGTTCACAAGATGATTTCATTTCttattaaaacttttt tctaattgACTAACTTCTCAAAGAACCCTTGTTTGAACAGATAGTCATAT TTGTAGAAGTCCTTAATTTATTAACCCCAATGATATTGTAATTAAATCAA CAGCTTAAGGTCTCGTttatttaaaaaagcattagTTCTTCAAATCTATT CAAGCACTTGCTTCACTTATAGGAAGGATAAAACAATAAAACGCCTTTCG ATTGGTTCGATAAACAACTATTCAAATGTAGGATTTTTAGATTCTATCCT GTTTTTAGAGTCTATACATCCTTATGATTTTCAAGGCCTTCCAAACTATG ATATACGGCTTGTTAAAGCCAATATCAACTTTTGAATGTCAAATGCTGGC AACCATTGCATTTGGAAGCAGTTTACTCAAGAAGTAAGTAAGTTAGTCAG TAAGCTcaagatattttttgatttttacaacTTTGATTATATTCTAAGTC TCAGAAAATTAAAAGCAGCTCAGTCCATAGGGTTGGATCATTGGATAAAG TGCTCAAAACTCTTTGTAACAAGGAATGTATAACCAGATGTTTTGATAAA TGGAATCTAAGTACAAGAATCtcctttcaaaaatattgatttttgcaCAT ATGAAAATCTGATCTAAAACAAGTTgttatcattaaatttttcattcaaa gttcattcaaattcaaacattttcaaattatcaaTTGTCCTTGGTTTCAA AGATTTTAGTAAAAAAGCAGCTTCCTATACCCGGTCAAGGGTGACAGCTA TGACAAAACGAAtttcaaattcggaatcagcatgaaaaattgattttaaa aagatatcACATCACTAGAAAACTATTCAAAattgtcaatttaaaaaaat tgacttttagcGGTTTTGGGCGGTTTTCCAAAAAAGGGGTCTCCGGTAGC CGCCCAAGGGTAAGAGATATGGAAAAACGGATTTCAAATTCGGAATCAcg tgaaaaattaatttaaaaaatatggcTATGTAAAAATATAACTCAAAAAG TGTAATTTTGGACCCCCCTCCTACTCAGAGCCTCCTGCAACTAAACCCaa taagataaaaatataatttatttcCAGACAGGTTTTTgctacaaattttt ttcttttcaatagacaCTCAGCATCGTCTTTTCTTTACTCTTACTTTAAA TTATCTATTCTTTTTTATTCCTAGAAAACAAACGACCAAGCAAACATACA CTCAAGAATGGCTTCAACAAACAAAGAACCGTTACCCACAGATGAGAGAA AGGTACAACATTCATCCATCGATAGTCGAAACAACTCCTTTGACTCTCTC TACCCTGATGGCGATGATCATGGTCTGATGGCATCAATCGAAAGTCATGG CTCGTTATGGAGGCAATATTCCCTTATCAACAAGAAATACCAAGACAATA TCAAGTCACAAGATCTATGTTTCTGTTGCGACAGTGATTCTTTTCGCCAT GGAACTTTGAAAACATTATTTCTGCTTGTGGTTGCATTTGGATTAATTTG CtctttttttgctttgagattATCTGTTTTCTCAACTCAAAGTGTAACTC TTACAGGAGGTGATCAAAAACTGGTTCCCATCTCCACTTATTTCAATAAA GGTCTTAAACTAAAGGAGAGTTGTAATCAGGTCACCCAGGAAGGCAGCAA ATTATATTTGTTACCAGAATCACCACAAATATCAGCAGAACGTAAAATTT ACACCGAAGCTGTACAATTTCTCATGCCATCTTGGTCTTATCAATATTGG GGCTTTAGACTCTTGAAAGGAACAGAGCTGACTATTTCAATATGTGCTGA TCTTCACTTACAGTTTTATCTCATTAAAGGTGAAAGAAAGCTGAAATCAT GGAAAGAAACGACTCTTTTCAACGATTATGACTTCCAAAGCAATATACGT CCAAAGGAAAGCTGCTCTAAGAAGGAAAACCTTAAAAGTCACTCAGTACA AGTTCATGAGAGCgatattttctatattttgttCTCGAGTTCAGTAGGCT GGCGTTTTTTCACTGAAGTCACTACCGTCTTGCAATTCAACCGAACAGTA TATGATACGTCACAAAGCTATTATTCTTGCTTACTATCAAATAGTTCTTG CATTGGAGAACTTCATCATGGTTCAGAGGACATTGCTTTAGTTGAAACAG AACTAGACATCAATCATCCAACGACTTCATTCAAGAATTACAAAATCTCT TACGAACCTTTACCGAGAAACGAAttctattttaaattgtttGGTTTTGT ATATTTGACTGTTGTCTTAGCAACCGTACTGTACTCTGTATGGCGCTTTT GTGTCACAATCCACGGGAAAGGTCGGAAAGAGCCAGGAACAAGTGAAGAG CGTAAACCACTGCTCAAAAACACGAAACCGCACTCATACTCGTTGAGGAG TCACCCAGGCGGTAAAGATCAATGGCTCGTTGTCAACCGCTCAAGTGGAG AATCAAACGACTTACGTATAGACGAGCGAGAAACATCGTCCGTTCTTGAA GAATCTGTTTCGCCGTCACGTCATCGTCTTATTACGACGACGTCAAATTA TTCGACATACAGCAACGAATCTGAACAGTCGTTATTTATGAACAGACGTG GTACGAACAATGCTGATATGATGCGTGCTATGCAACAAAACATGGAACAA CAGCAGCTCTTGGATTCTGTCATGACGTCTGCAGGTGTCAGTGCTATTTG ATTTACTTCTAATCTAACGAATTATCAAAATGCGTAATGTTAAGATTACC GCCCTAaccgcacgatgggttattttttctcttttgacgccttcaaagag agcaattaatcgttaattgaattaagagagcaattaatcgttaatcacac tcttcaacgaggtgccaatgtttacaaaatataGTTTAATGTTCTTTCTT tcgtttttttgacttttttgaaagttttcgtTCTAATATTTGTGTCGTCA CAAGCAATTTGAAGTACAAATAAAATGTAACGTTCTCGGACGTTCCATAG CGTTCATGGAACGTTCCAGATCGTGCTTAATCGTTCTCAAACGTTTCAGA ACATTCAGTAACGCTTAAGAACGTTGGAACGTTCATGAACGCTCTCGAAC GATCATATGCGTCAAAAGGTTAATAATGAACTCGATAAGAACGTTCTTGA ACTTTTTAGAATGTCCCTAAACGTTCCAAGACATTCCTACACTAGTAAAT AATAGGGAACGCTTAGGAACGTTCAGGAACGTTCAATAACGTTCCATATC GTTCGTTTTACTGGAACGTatcattttatttgtatttaAAGTTGTTTATG ATGACAATTTTTGTGCGATAATGATAACCGGTTGTAATGGAGATTCGTAT TTATACCACCTTCACACGTCATTACATGTTACTTACGGAATCAACCAATA GAACGAATTCGTTTTGAGTTGGTACGAATGATTGTAAAAGGTATTTCTGT ATAGGGAGCATATCTATAAGGTTTGcgaccaatgaagtaaaagcccgaag gactagaatcgaatctttaacctttctcaggcaagaaaaagtgaagcctt aaaatatgcgccgtatttttgacgacggattgaatctagcgattcctTTA TTTTAGAGtgatatcttttttcaaatttaggtgtaaattttagtttcaat ctgtcatttctGTAAAAGCCAGGCGGACCGcgctaggccgcgcaactttg ttaGGATTTGGTAGGCTttaaatcctaccaaggagattcgattctagctc ttcgggcttatacttcgagatgccttggagtttttacaagatacttcact aattggtcacttaaagtgatagagatgacgcgttctttagaaaaagtaat aagattcttttattacatcttaacgaccaaccaaatcaaataagagcttg taaaaactccagcttgtccctatACTTCATTGTTTGCGACTCAGACTTGG AGTGTATCAACTGTACACATGAAATGTGAACCTCTGTGAACCAAATATGA AATTTATAATGTTGCCGTAAGTAaggaagaaaagacactttttttatttt ttgttactgTTAAATTTTTTAAACCATAACTTTATATTGGAATATTTTGC TAGATTTTTAGCGCTCAATTTTTTGGAGTAATATTTTCTAAGCAGTgtgt attttattttctaattacATACCTATAATAGataaatttttaaagttaat TTATTCAAGAATCATGAC
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
Feature NameUnique NameSpeciesType
XLOC_035501XLOC_035501Clytia hemisphaericagene
The following exon feature(s) are a part of this transcript:
Feature NameUnique NameSpeciesType
TCONS_00056348-exon-scaffold_273-1491911889:80009..80199TCONS_00056348-exon-scaffold_273-1491911889:80009..80199Clytia hemisphaericaexon
TCONS_00056348-exon-scaffold_273-1510915933:80009..80199TCONS_00056348-exon-scaffold_273-1510915933:80009..80199Clytia hemisphaericaexon
TCONS_00056348-exon-scaffold_273-1575043694:80009..80199TCONS_00056348-exon-scaffold_273-1575043694:80009..80199Clytia hemisphaericaexon
TCONS_00056348-exon-scaffold_273-1491911889:90833..93876TCONS_00056348-exon-scaffold_273-1491911889:90833..93876Clytia hemisphaericaexon
TCONS_00056348-exon-scaffold_273-1510915933:90833..93876TCONS_00056348-exon-scaffold_273-1510915933:90833..93876Clytia hemisphaericaexon
TCONS_00056348-exon-scaffold_273-1575043694:90833..93876TCONS_00056348-exon-scaffold_273-1575043694:90833..93876Clytia hemisphaericaexon
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_273supercontigscaffold_273:80009..93876 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

min expression (0 tpm) - - (12.5139 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
7.56446 6.99949 1.66368 0.82156 4.68227 3.72452 2.87058 3.30857 2.89678 2.80332 2.28043 2.80298 1.15501 1.73788 2.86432 3.34088 2.85174 2.7388 1.77782 0.827929 2.15886 0.594828 12.5139 11.89 1.98148 1.96084 2.04113 0 8.09117 8.11636
Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00056348 vs. Swiss-Prot (Human)
Analysis Date: 2017-10-03 (blastx Clytia hemisphaerica v1.0 mRNA vs SwissProt (Homo sapiens))
Total hits: 0
ZOOM
x 1
POSITION
0
50010001500200025003000Sequence
Match NameE-valueIdentityDescription
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