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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00056379 ID=TCONS_00056379|Name=TCONS_00056379|organism=Clytia hemisphaerica|type=transcript|length=267bp
ACAACAAGAAAGTCGATCACAAAGAAAATGGGTAAATCAAAGACATCAAA
TAAAACATCTACCCCGGTTGAATCCAACAATACCAGAACAAGACCACTGA
GAGAAAAGAAACAAGTGAGGCCCAATTGTCCAAATGATTTTCGGGTTCTA
GTGAGATACCTCGAGCATCCAAACTACGCTATATTATCACCATCCATATC
CAAAAATCTCTATGGGAATTGGTTTGAGGTTGGGGACAAACTAACATTGA
AAATTGATGGGGATACA Run BLAST on NCBI transcript from alignment at scaffold_274:33589..36027- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00056379 ID=TCONS_00056379|Name=TCONS_00056379|organism=Clytia hemisphaerica|type=transcript|length=2439bp|location=Sequence derived from alignment at scaffold_274:33589..36027- (Clytia hemisphaerica)
ACAACAAGAAAGTCGATCACAAAGGTATGTATTTATATGCTTTAAGTTAA
GAAGACTTATTTTTCATGTTTATTGACGACAATTATATTTGTCACTCATT
TTCGTCTTCTTTTCAGTAGTCAAGGATTATACTTACTCGTCTAAACATAA
GTTCTCTTTTATAAGGAGATATCATTACTTACTTATTCCAGACGTAGTTA
ATTGAACAGTATTTTTAAGCAAACTTTGTCGAATAATCAGACTTTGTCAT
ACGATTAATAAGAGTTTTTATAAGTATAATATTGTCCCAGCTTTATCCCA
CTTTTAGTGAACCTTCCTATACCTTTTGTCCTTCAGAAAAAACCAAAAAC
ATTAGCCATTGCGGCAAGAAAAGTACGTCTTTTTGCTTTGCTTTTTTTAC
TTAGAGTTTGGACAGCTTAAACCGTTGCGTTCTAAAAAATATTTGATGCG
GCAAAATTTCATTATTAATCATTATTTGTCTCCCCGGTTTGATTTGCATG
TTTTGGTATTCTCTTATCTAGGGTGTAATCTTCAACTGTCCTTTGCACTT
ATTGTGTATTCGTTTGTAATTTTAAAGGTGAGTCTCATGAGTACATTTCC
TGGTTTAGAAAATGGGTAAATCAAAGACATCAAATAAAACATCTACCCCG
GTTGAATCCAACAATACCAGAACAAGACCACTGAGAGAAAAGAAACAAGT
GAGGCCCAATTGTCCAAATGGTAATTTTTTCTATTCATGATGAATTTTTT
TTCAAAGTGTATTTGACCATTTCACGTTAANTGTAATTGTTTCTATTCAT
GATTAATTTTTTTTCAAAGTGCATTTGACCATTTCGCGTTAAGTACTTTC
CTGCTAAATGTGGCACTGGAACATCAGGAATATGCACATTTTTTTTAAGA
AACATGAGGCTCAGAATGCCTAAAAGTTAAGAAACCTCAAAGAAACATGC
TGAGGTTCATAATGAGAAAATAACATTTTTTAATTCTGTTATTTAAGAGC
CTTCCAAACAAAATAATAATAATAAATCTCTTTTATCACCTATAAGATAA
GGTACATGGTTAGGGAAAAATAAAAAGCTAAAAGTATATACAGCGTTAAA
AAAAAAAGGAAACAAAGGTCAGACACAAATTATCATGACGAGAAAGGGAC
GGGATAGGGAAAATGGCAGGAGAGGGGTGTCATGAAGATGTGGCTGTCCT
TGAGCGTTGAACGTGTTCCTCTAGGATATGTTTTAGAGCAAGCGGATATT
CCATCACATGCCAGTTCTTTATAATGAGCTTGCATAGGTCAACCTCGCTT
GAGTTTTCATAAATATATTTCTTATCAATGTTGTGTTTTTTATCCAAGAT
TACTTGAACGAGGTCAAGTCTGCTCATATGAATAGTGTTTGCTGCCCTCG
CGAGTAAGCTATAGTCAATATTGTCAGTGCAGCTGAGTGTGTTATACATA
TATGAAGAGGTGTTGGAGTTCACCAATGTTTGTCTTAGAAGTTTAACTTT
TCTGTCCTCTATGAGGACAGAGACATCCGGGATATTGTAAATTTTGTGCA
GATGATTTTTGCTGTTTTTCGAAATATTAAAGAGAGATTTTAAACAGGAC
CTCGCTTGTCTGTTTAAGCAGTCTAGTTCAGTTTTAGTTAAGTCAATAAG
TTCCAAACCATATAGTAATTTTGGCAAAACGATTGATTGAAAGATTTTGA
CAATAGCATCCGGGTGACAATGCCTTACGCCAGAGGTTATAAGAGAGGTG
GCTACCGACCATAACTCCGAGATTCGGGAAGAGTCTATTGTTCTTTGTGC
ACCAGTGGAATCCAAGATGGGTGAGTTTTTTTTTGAGGATTGATTTCTGT
AGATTCAAGTTGTATCGTTGGATTAGCAATACTACTCCGGCCGGAGATTA
CAAATTGTGTTTTTGATTTCGATGGGTTGAACTTCAATCCATGCTCTCGT
CCATATTTTTCGCATAAACTAACCATTGATNAATGTTTTTTTTTGGCGCA
TGAAAATAGAATTATATACAAGTTCATAAAACGTTTCTTTTTTTGTAAAT
AAACACTACCGTATGTCAAAAAGTTAAAAGAAACATCTAAGAAAAATTTA
AGGCTCAGGCTGATTTCTTAAGAAACATTGATGCTGTTTGGTAAAACTAG
TTTCTTAAAAAAAACAAATGTGTATATGCAATTGAATTAGTTGAAATGAA
GAGTAATTATTGTTTATTGCTGCCCCTGTTGATTTGTAATTTTTTTGTCA
AAATTAAAAAAATTTTGCCTTCAGTTTTATCAAAACTACTTATCTTTATC
TTTTCTAGATTTTCGGGTTCTAGTGAGATACCTCGAGCATCCAAACTACG
CTATATTATCACCATCCATATCCAAAAATCTCTATGGGAATTGGTTTGAG
GTTGGGGACAAACTAACATTGAAAATTGATGGGGATACA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00056379-exon-scaffold_274-1575043694:36004..36027 | TCONS_00056379-exon-scaffold_274-1575043694:36004..36027 | Clytia hemisphaerica | exon |
| TCONS_00056379-exon-scaffold_274-1575043694:35308..35419 | TCONS_00056379-exon-scaffold_274-1575043694:35308..35419 | Clytia hemisphaerica | exon |
| TCONS_00056379-exon-scaffold_274-1575043694:33589..33719 | TCONS_00056379-exon-scaffold_274-1575043694:33589..33719 | Clytia hemisphaerica | exon |
| TCONS_00056379-exon-scaffold_274-1510915933:36004..36027 | TCONS_00056379-exon-scaffold_274-1510915933:36004..36027 | Clytia hemisphaerica | exon |
| TCONS_00056379-exon-scaffold_274-1510915933:35308..35419 | TCONS_00056379-exon-scaffold_274-1510915933:35308..35419 | Clytia hemisphaerica | exon |
| TCONS_00056379-exon-scaffold_274-1510915933:33589..33719 | TCONS_00056379-exon-scaffold_274-1510915933:33589..33719 | Clytia hemisphaerica | exon |
| TCONS_00056379-exon-scaffold_274-1491911889:36004..36027 | TCONS_00056379-exon-scaffold_274-1491911889:36004..36027 | Clytia hemisphaerica | exon |
| TCONS_00056379-exon-scaffold_274-1491911889:35308..35419 | TCONS_00056379-exon-scaffold_274-1491911889:35308..35419 | Clytia hemisphaerica | exon |
| TCONS_00056379-exon-scaffold_274-1491911889:33589..33719 | TCONS_00056379-exon-scaffold_274-1491911889:33589..33719 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_274 | supercontig | scaffold_274:33589..36027 - |
Blast
The following BLAST results are available for this feature:
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