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Sequence
The following sequences are available for this feature:
transcript sequence >TCONS_00056491 ID=TCONS_00056491|Name=TCONS_00056491|organism=Clytia hemisphaerica|type=transcript|length=2006bp
tatttaaaaaagttttgcaaGAATCAAGAagaatccactttttgattttg
cagCATCATTGTGGCCTGATCATCCTTATAAATTCGATGCTTTCGAGTGT
ATCAATACGAACCATTTTCACCTCAACAATCTTTAGGGCTTGGTCGATTT
TTTCATCAAGTGCTGTTCCAGGAAATATGCCATCTGAAGAAATGGTACCC
AAAGAATTTAATAAAGCAACATTCGCCATGTCATGATTTTGGTTTCCCGA
GGCACAATTTGGTTGTGCGAGGGGAGTACTAAGAACCAAAGTTGGTTATA
CTGGTGGACGCAAAGTCAATCCTACATACCATTCACTTGGTGATCATACT
GAAACCATGCAAGTCGACTTCGATCCAACCCAAACAAACTATACAAACCT
TTTACAATTATTCTGGGAGAATCACGATGCAACTTCACGGAACAAAGCGC
AGTATATGTCGGCTATCTTTTTCCATGACGAGGAACAACGGGAACTGGCG
GAACAAACCATGTTGGAACATCAGAAAAAAGTTCCGAGACCGATCACGAC
GAAAATTTTACCTGCTGAAACTTTCTACGACGCGGAAGACTATCACCAGA
AATATTTATTACGGCGACACTGGAAAATCTTCCAATCGCTCAACCTGTCC
GATCCTCAAGTCATTACGTCACACGTGGCCACCCGCTTAAACGGTTACAT
TAACGGACATGGTCAAATGGCGGACCTGTTAAATGAGATTGGTGCATGGA
AATTGAATGAGAAACAAGAAGAAATGATACGCGATGCGGTGGCAAATGTA
AGATGTGTTGGTGGATCATGTAGTAGGTAAAAAGAATTTTGCTTTGCTTT
ActtatatattattttaattatttttgtaaatacagTCGATCAAGGTTAT
ACTGAGCTATCTGCCAAGGGTTCGATAACAAAATGTCGAAGAATGCTGGC
TTTATATATGTCTTAACTGGCGAGGATCACTTAGTATATAGCATTCGCAG
ATCTTGACTCGAAATATGCTTTAAATTATATTGTCGTTCTTAAGCTTTTG
GTTTAAGATTTAGCTTTCAGCCTGTGAGGATTTAaggttatgcttataaa
aagaaaaagcctGTGCTTTGTATTTCATTTTCGCATTATAGGTACTAATA
ATCTCTTCTACAAACAGATGGATAGTGCTGACTGTGCAAGTAGATCTTTA
GATAACTATATTATATTGTTTCAAAATATGAGTCTTCAATAATTTTGCgc
aattttcgaacttttctcTCATTTAGAATCATTTTACGATGATTATGTGA
GTATTAAACTGAACGCCCTCACTTTTTTTCACCTacgttttttttcaatt
agagCTTTAAAATTATTCTCCTCCGAAACTTGAGCTGCTTGCTAAAGTTC
CATTTTGTTTGAGGACTTTTGCAATGTGGTATGGTCTTCGTTTTTCGCTT
GCTGGTAATATGCGAAGTAAATTTTGGCCTTAAAGCTCTtgaatcaattt
tctttttcaaatcttggactaaatctttttttttttatatgaaggTGTAA
GAACGCTTTCATTATacatttggtttgtttttttgaaaattttcaaaaat
gaaacaaaactgttttaagattcataaaaatgttatttttctttaagttt
GTAAATATAATGAGACTTTTATTTTATACTCCTGTCAAACATGAATatga
cttcaaaatatttttttggtattATATCATGCACGCGCAAAATACCGCAA
acttttttgccattttttatttcaattttttctatgtatgatgatttttc
actaaaacatTATATCTTTTTATATGTTGTGAATAGATCTGATATagata
caattttttttggtatctttgtagaaatgtggaataaaaatgtctaaAAT
TTATTTATGTTTAACACTGTAAGGTATTTGTGTTTTGGACTTACcccgga
ggtcctttaaattaccttattacacgaaaataAGTAGACATGTAAATAAC
Acgaaa Run BLAST on NCBI transcript from alignment at scaffold_276:263851..280834- Legend: exon Hold the cursor over a type above to highlight its positions in the sequence below. >TCONS_00056491 ID=TCONS_00056491|Name=TCONS_00056491|organism=Clytia hemisphaerica|type=transcript|length=16984bp|location=Sequence derived from alignment at scaffold_276:263851..280834- (Clytia hemisphaerica)
TATTTAAAAAAGTTTTGCAAGAATCAAGAAGAATCCACTTTTTGATTTTG
CAGCATCATTGTGGCCTGATCATCCTTATAAATTCGATGCTTTCGAGTGT
ATCAATACGAACCATTTTCACCTCAACAATCTTTAGGGCTTGGTCGATTT
TTTCATCAAGTGCTGTTCCAGGAAATATGCCATCTGAAGAAATGGTACCC
AAAGAATTTAAGTAAGTTTATTTTTATTTTTGTTGCATGTCAAGGACTAG
AATTGAGCAGTCTTCTTTCAGTCTTTAACAAATAGGAAAACCTTTTGTTT
AATAATTGAAATTTCAATATCAAAAGAATTATGAAATGAAAATATTTATT
ACACATGTTTAAATATTGGGCCCTTCCAGTTTTTATAGACCTTTTTTCAA
AGAGGACGTCCTGTTGAATAATTATGTAGTCCAGCCATAAACAATGATAG
AGCCATGCATAATTACTGTATCATGCATATTGTAATAATTATGCATGGTT
TTATCATTGTTTTTCTGCTGGACTACATAATTATTNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NAAATAAATGTTTGAGACAATGTTGGAAAATGCCGCGCAAACCATTCAAC
AAGAAAGTTCAAATGTTTGAAGAACCATGCAGCCATGTTTGATGGTTTGC
TCCCAGCTTAAAGAAGACACCAGCCCCTCTTTCTTTTGGACTTTGACCCC
TCCCCTTTTCGACACAACTTTTATGATGGGCTGCCTGGTATCAAATGGAT
GTAGGTGACACCCTACTTGAAATAGAAGTACTTTAATACTTACATAATAA
AAATAAAGTCTGATGTCTCGAAAAATGTTGCACAACAACACCAAACAACT
TCCGAACTGTCAAAAATCGCAGCGCGCGCAAGTGGAGACCGGCCATAAGT
GATAAATAAGTGATGCAATCTTTGGTAAAATTGAATGTTGAATGTTAAAT
CGTCGGGAAAATTGCATCGTCAGCAAAACCAAAGGTTGCATAACGTATTG
GAATTAGCAAAATACACCTTTCCCGTAATTCAAATTTCTCAGAAATGGCC
CGGGAAAATGTGCGCTCCACCGTTGTGTAAAAATTGTTTGGGAGGTAAAA
AACGCGTTTTTGCCTGCGAGGGGTTAGGGAAAGTGGGTTTTTAGCTTCTA
ACTTTTGATAGCGATCTTCCTTTGGCAAAATATTTTCAGGGTGGTATAAT
ATCATGAATAGATTGAACATACTAAAATTTGAGGGGATTCTGTTCGACAG
AACTTAAGAAAAGCACAAAAAACCAACTTTCCCTAAGGGAACGCAGGCAA
AAACGGGTTTGTTTACCTCCAGAGACCAAACGATGGAGAGCATCAAAATA
ATGCGCGNGGAATTTCCGTAGCAAATTGCTTTCAAGAAAGTCCGAAATTA
AAATACAACTACGCGGCTCTGCTCGCAGCTCTGTTTGCAGCTCTACTCTA
CCATTTTTGTTTTGATTTAATTTTGTATTTTAAATGACCAGCCAGGTCTT
TCATTTGAGGTCTATGCATGTTAGCCTCCACTGATGCAAGTTACCCAATC
TCACGGTATGCATGGGGCTCTGAGTTCGATTCCGATGGGTGTCTAATTTT
TCAATTCTTCAATTTTCTTTTTTTAATTCTCTTTCTTTTATAATGAAGTT
CAATCAAACAAACTTGTAACTAGCTATAACTATATTACCTCCGCTCTCTG
TCTAAGGTTTAGATAAGTAAGTAAGTATTACAAAACCTCTGATTTTCAAA
AACTTGTTCGTGAAAACGGACCCTTTTCCTTTTCTTCTTTTCATCTGAAT
ATTGCTTCCTTAGCTCTACATTTTGATGACTTAACTACTCTTCTTTCTAA
ACTTAACTTCAATTTTGACGTAATGGCTATTACCGAGACCCGTCTTTTGA
AAGGCAAAAAACCTTCGTTTAACTTCAATCTTGAGAACTTTCATGTACCA
ATTCATACTCCTACGGAGGCTTCTGTTGGTNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNTGATTAGTCCAGGCTATAAGGCGG
TCTCCATCCTTTTTTATTTTGTGGATACCGTCTCATGTATTTTAAGTGTT
CAAATGGTAAATAAATAGTTACTTACTTAGTTACTTACTTATAAGCTATG
ATAGCACGAATAGCATCACTTAGAGCCAGTTTTTTTAAGAATGGGGCAGT
TTGGGGCAGTTCCAATAGTTTGAAACTTAGATTTTTTTCATTTTTGGATA
TGTTGTTAAGTACAATGAACTGAGTNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNGCTCATTTTCTGTTCAATCTTGAGCAAAAATTGCCTG
CCCTGCTCTTAAAAAAAACTGGCTCTTAATAAGAACGGGTATAGGCGTTT
GCGCCTGCGTTTGCTGACTGACAGTTTCACTTTCACTTTCAGCCAGCGAG
TGAGCGAGCAATTCTTTGTAATAGAATCATCAAATAAATTCTTTCAGAAT
CATTGAACTTCTCGTTTTATACTTTAAAGGCAGAATAATAATTGATTTCC
GGGTCAAAATGTTTGGCACTTGATCCAATCGTTTGCTTANNNNNNNNNNN
NATAATTGATTTCCGGGTCAAAATGTTTGGCACTTGATCCAATCGTTTTC
TTATCTTTCTTGCGTGGTCGTTATTTGAATTTCAGTATTCAATGCTTATA
AAATACAGTTGTTATAAGAGTATTAAACTCCTCACTAGGAGGGAACAGAT
CATAGATTCGAATTGAACGCTTAATTACTAATAGCAATTAACATTACATA
ACGCGTTGATATCTCTTCACTCTAATGAAAATGTGATATAAAATTAAAGT
GATGAGAGAATCACAAAAAAACACAAGAATTGAAAAATTGGACATCCATT
GGAATCGACGAACTTGGAGCCCCATGCATATGAGACAGACGATCTAACCG
CTCGAGCTAACCACGCTTTGAAAGTAGTGAGAGAAAGCATGAAAGAAAAA
GGAAAGAAAGAATCGAGAAAAAAATTAATTCCCGCTTTGATGTTATTATC
GAAACAAAAGGATCAGTCATGCCGAAATTCCTTTCCACACGTCAGTAATC
TACTTTTTATAAATAGAAAAACTAGATTGTAAGGAAGATTCTAAAAAAAA
ATAGCTGTTTTCTTAGACGACTATGTTTAAATGAAAAGAGGCAGCATTTT
TAAGTTTGACTGTTCAGTAGTAAACATGATATGTTTCAGAAGATATCAAT
TGAAATGAGATCAAAGTATTGTTAAAACAGATTCAAATCAAATTGAGTCC
AATTGAAAATCAAAGCAGACAGAAAATATTTTGCTTTGATTATATATTTA
NATTGAAAAACAAAGCGGACAGAAAATATTTTGCTTTGATTATATATTTA
ATGTTGTTCAAAGTTTATAGATTTAGAACATTAAAGTTTTGCTTCAATTA
TCAGTTTGACACAAAAAAAACAGATTTTCCAGACCAACTTAAGTAGCATT
TTAAAGCAGAATTGGAAAGTAATTTTAGTCGTTACTCTGTCTGATCTATT
TTATCACTAATGAAATAGATGGTTTATAAATAACTATTAATTTTTATTTA
GTAAAGCAACATTCGCCATGTCATGATTTTGGTTTCCCGAGGCACAATTT
GGTTGTGCGAGGGGAGTACTAAGAACCAAAGTTGGTTATACTGGTGGACG
CAAAGTCAATCCTACATACCATTCACTGTAAGTCATATTCTTTTTAATAG
TCGGTCAGATAGGTGAAACTTTCGTCTCCGGAGTTGGAGTACTCCTAAGG
TGGTTTTTTGGTATCCTTAGACATCCTAGTTATGGAAAAAGTTGGTCGAC
CAGATCAAATCGGTAGCTTAATATGATTTTTCAGACCCAAACGTTATAAT
CTCTTTCTGTATTTAAAGGTTTTGTTTTTAAATAAGTTGATATTATTTTC
GATTATTCAACTATTTTAGATTTATTCAAGCATATTGAATTACAAGCCTT
TTTATATAAATTAAGACAAATATTGAATATCTTAATAATACAAAAAAAAA
ACAACACTTTTCACCTCACACAAAATTCAATACAAGGCAAAAAGGGTTGG
GGGCGTTAACATTTCAACCAATAAACCAAACTATTCTCCACTTGTGGCAA
CTTTCCATTATGAATTATCTAAATCGTCCGTAAAGCATACATGCCTTAAA
TTTAAAGTAAAGACAACATGCTGAATTGAGATTTTAAATTAATGGCTAGT
GGTTGATCATATGGGAAAGCTTCTTTAAATGAGGAGATAGAAAATAAGTT
ATTCGATTGAGATTTCGTGGTACATTTTGTGGCTTTGGAATACTTTGGAG
CTGGTAATTTAATAATCCAGAAAGGGTTAGCTGCTAAAAGTCGATTATCA
TATTATCGAGGTCACCATAAAAACAAACTTTTTTCAAATCACAAATTTTC
TTGAAAATACATAGAAATTGTTATTAATTAAGGCTGGGAAAAGTCATGAT
AAATTTTAAAAAGAAATATTAAGATAAACATTAAAGTAAACATTATTTTT
ACAACTGATTCCTAAAGAGTCAGTCATTTTCTAGCTCAACTTGTTTCAAT
AAAAAAAGTTTATCAGCTTCGCAGAACATTTGTTTCAATCATCGCTGGCG
GGATAACCAAGATTTCCCCATGAGTGGTTCAAAATTCCCAATACATTCCA
CATTTCACATCGATTCTGATGGTACGTTAACATTCCTTGTTCAGAACGTG
TGAAACCTGCCCAAAAGTCAGTTGTTTTGCCTTGAAATTGTGTCATGAAA
TTTGAAAACAAGAAATCTTTATACATTCCTCGGAAAAGTTTCATCAATTT
TTCGTCCTCTTCAGGGAGCGTTTCTCCTTTATAGAATTTCAACCCAAACA
GAAGCACTGAATCCCATCCGTGATATGCAGTTTCTAAACCAAGACCGATT
TCTTTAGTGGGTGGTTGGCTCATAACATACCGTGATACTGTATAGCCTTT
AACTTTTGATAAATGATCTGCAACATAATTTGTTGTACACAGAACTAGCG
CGTCGCTTGTCATAACTTCGTAGACATATTTAGGTGTGATATTCTGAGGT
GGACTTTTCAAATCATTTTGGTATTGGTCTAAAAAATGAGGGTAATGTCC
TTTCTTAAAAGTATCCATCTGAGGCTCTAGTGCAGCTTGTAGGTCTGCCC
ACGTTGTGATGTTGGCATCTGGTTTCGGTTTGTGAGGAAACGGACCGGTT
TCTTGTGCACAGTTCCCGATCAAGAGCTCCACTTGAGTATTCTGGTGGAC
TGGAATTTGGTCTGGTGATTTTGTCACTACAACCGGATCCAGAATCTCAA
CAGGGTAGCCATTATATGGTTCATTAGTTGGCATTTTCCAATGATAAGGT
GTAACGGAAGTTCCTTTGAAGAGCGATAGAAAGTCATCAGCATCTATGTT
CTGCAAACATTCAACAATATTGTCTGGACTCTCTTTTTGACAATCAGCTT
TGTCAATAATACTACGATACTTCATATCAGCTACTTCATGAGTTGTCCGT
ATGTTCGGTGCTCCGGATTGCGGGCTTGCCTTCTGAAATAGTCCGTTTGC
CAGGGGTGAGCATAATAAACAGTAAACACCAGTACCGCCACCTGATTCAC
CATAAATCATAACGTTCTCAGAGTCTCCACCAAATTGTTTGATGTTACTT
TTAACCCATTTTAGTGTCTCAATCTGGTCCAGAATACCATAATTTCCATA
AGATTTGTTTGGTCCATTTTCAATCCATAACTCTTTCAAAGACATAAATC
CGAATACGTTCAACCGGTAGTTTATTGATACGGTTACTGCCTCCATATAA
GCGGAAAACTCCGTGTCCGGATGAAAAGCGAACATTTCGTTATATCCCCA
TAGCATTCCTCCTCCGTGTATCCATACAATTACTGGCAATTTAGAGCTAG
GATCCAGATTAGGGGTACGTACGGTCAATACCAGGCAGTCTTCGCTAGTA
TTAACGGACGGTGTAAAAGGATGGTCTTGCTTACACGCTACTACGTTTTT
GTTGTATTTCAAAACACCATCCCAACATTGGGCGGGATCGTCACTTAAAC
GAACTGGAGGGCGCCATCTGAGTTTTCCTACGGGTGGTTTTGCGTAAGGT
ATATTACGGAACTCGTAAACGTTTACAGAATCGTTATGCCACTTAACGTT
TTCCGTAAACCTCTTACCCTCTACCGGGCCGCATTCCGTATCTATGTTAA
CGTAATCCCGGTCGGCATCAGGGATTCGGTTCTGCGGAACGGCAAACGTA
GATGTTATGTGAACGCATAGAATCGTGAAAAGAAGTAATTTTCTTTGCAA
TTTGACTTTCATTTTCTTAGAGAGCTGAAAAGAAAGGAAAAATTACCATT
ACCCTTAGACTTCTTTGTCTTTTGCTTTGACATTCTCATGGGAGGCCATT
TCGAATTATGGAGAGTAAATGCATTTGTTTTGAATGTAAGATATGACATA
GAAAGCTTGAAGTAGATTTTCAATCCCAAAACAAGTCCCAATCTGAATTT
CAATTAGGGGGAAAATATACGAAAAACGAATTTAAATTTATGTAAGCTTA
CCTTAGTACTCCTCACACTATCGTCCCACGTTTCAACATCCTATACGAGC
TCTACTGCTATTTTGAATTCTGTTTTCATATACTCTATTGACCTTGTTTT
GTAATATGAACCTATGTTATTATTCTACATTGTAACCAATGTTTTTGCTC
AAGATAAGCAATTTTTGATACGCTATTTAGTATAAGAAACTTATTCATAA
ATCCTAAGCATTTTTTTTGCGAAATAAAATCTAATTTAAATCTAAATTCT
AATCTTCTATCTTCTTCTTCGATATCAGGTAGGCTATTTTATTCTCCTGG
ACTGGAACTTAGACTACTAAATTTTTCACGCATACATATTAACAATTTCT
TTTCCTCTGTTGTTCTTATCTTAATGGTTTCCATTTTAAATAAGTCGTCC
TCAAGTACTACAATTAACCTTTGATGTTTGATTCATTTGCACATTTTACT
GCTTAGCTCACCAGCTAAAGAACAAAGTATAATTTAGCACTGAACTTTGC
CCCTTTCATTAACTGTTTCATCAGTTTATATTTAACCCTCTCAATAGTCA
GATCTTTTCTTTCAGCAAATAACAATAAAAAACAAATTAAAAAGCTTGAT
TAGAAGAGCAAGAATGCTAGATATCCCTATAGCGTCAGCCCCCCTGCTAT
TTACACCCTCGAAAAAGCCAAAAATAGGTGGGGGTAAAGATGTTTCAAAT
ATTTAGGGGACCTAAATATACTTGGGGGGAGCTGAGCTGAAATTAGCCTA
GAAATCTAAGCTAGTTTGATTCAGTCACTAGAATAAATCTGATGGTCAGT
TGTGACTGGATAATAGTATAATAACAGTATTCCAAGGCAAACTTAAAATC
CGTAAATATTAAAAATCTTTAAAGCGCCGAAAATGCTATATTCAATGAAG
TATAAGCCCGAAGGGCTAGAATCGAATCTCCTTGGTAGGATTTGAAGCCA
ACGAATCCTACCAAAGTTGCGCGGCCTAACACGGTCCGCCTAGTTTTTAC
ACAAATGGCAGATTGGAACTAAAATTTACTGCTAAATTTTGAAAAAAATA
TCACATGAAAACAAAAGAATTGCTAGATCCAATCCGTCGTCAAAAATACG
ACGCATGTTTTAAGGCTTCACTTTTTCTTGCCTGAGAAAGGTTAGAGATT
CGATTCTAGCCCTTCGAGCTTATATTTCAATGGCTATATTGCCATTAGCC
GTGTGTCCTAGCCTTGTGAATACGGGCTTAATTAACTAGGCTAAGCTGAA
ATCTCATCATTTAACGTGGGAGCTGAATACTTCATCTTCATGGTTGGCTT
ACAATACAATTACTCAAATTAAAGCTCATGAAGCCGAAAAATTTTCGACT
GCGGCCCAATGTTTTTATTTAAACCCACCTTGCTCCTCTTTAAAGGATTT
AAAAAATTTTAATTTAACCCATGCTAAAGTTTTCAAAAAAAAAAGTCAAG
TATTAGCTCAAGAGACAGAGGTGCAAAATATCATCCAAATTGGACCCTTT
TTTTGGCCACCAGGCAACCCAAAAGTTTTTGCCTTATTTTTGAGAAAAAT
ATCGATCATCTATCGATTTAAATCGGTGACCGTCTGGTCAATTATATATC
TCTAATCAATTCTTTCTTTTTTTCGCTATATAGTGGTGATCATACTGAAA
CCATGCAAGTCGACTTCGATCCAACCCAAACAAACTATACAAACCTTTTA
CAATTATTCTGGGAGAATCACGATGCAACTTCACGGAACAAAGCGCAGTA
TATGTCGGCTATCTTTTTCCATGACGAGGAACAACGGGAACTGGCGGAAC
AAACCATGTTGGAACATCAGAAAAAAGTTCCGAGACCGATCACGACGAAA
ATTTTACCTGCTGAAACTTTCTACGACGCGGAAGAGTAAGTGACTCGAGA
TTCTGATTTTGTTTTTGTTTTTGTAAGGAAATCAAAAGGGTTTTAAGGCT
GATTGATTCCGCCTTTTGATCAAATTATACCTTCTATTTCCTCTATAAAG
AAAAGACAAAAATCCTGCACGAAAATGTTCTTTAAAATTTGAATTTTAAC
TTTCATTAAATTTCCGTAAATTTTAGACTCGCTAGCCATGAAACTGAACC
CCCTGATATTATAATAAATTTTTCAGATCCCTTCTTTGAGGGCCCTGAAA
GATTTTCTTTGCAACTTTACTACAATCGGTGCCGAAATATTTGGCACAAA
AAGGGAATACCCTCAAAACTTTAAAACTACAAGTGAATTTTAAGTGCTTT
GAAGTAAAGTTTGGAAGTAGAGTTTTAACTCTTGGCATAAGACTTAGGAC
CTTAGGATCTCAGGATCTAAAAGCTCAAAAATGTTCCAATAAGGCTGAGA
AAATAGCCTGGAAGCTACTTAACCCCTCCCAAATCGAAAAATCCAATGAA
GCAAAATGGAAGTACTGAAACTGCAATTCTCGCCCAACTTTTAAATTCTA
AAAAACGTTAAAATACCCAAAATTGCCAATATATTTCAGCGCTGATTGTA
GTCCTGTTCAAATACTCAATTCAGTTGCTCCTTAAGTTTTCAGCACTCTC
TTCATTCTTTCTTCCAGCTATCACCAGAAATATTTATTACGGCGACACTG
GAAAATCTTCCAATCGCTCAACCTGTCCGATCCTCAAGTCATTACGTCAC
ACGTGGCCACCCGCTTAAACGGTTACATTAACGGACATGGTCAAATGGCG
GACCTGTTAAATGAGATTGGTGCATGGAAATTGAATGAGAAACAAGAAGA
AATGATACGCGATGCGGTGGCAAATGTAAGATGTGTTGGTGGATCATGTA
GTAGGTAAAAAGAATTTTGCTTTGCTTTACTTATATATTATTTTAATTAT
TTTTGTAAATACAGTCGATCAAGGTTATACTGAGCTATCTGCCAAGGGTT
CGATAACAAAATGTCGAAGAATGCTGGCTTTATATATGTCTTAACTGGCG
AGGATCACTTAGTATATAGCATTCGCAGATCTTGACTCGAAATATGCTTT
AAATTATATTGTCGTTCTTAAGCTTTTGGTTTAAGATTTAGCTTTCAGCC
TGTGAGGATTTAAGGTTATGCTTATAAAAAGAAAAAGCCTGTGCTTTGTA
TTTCATTTTCGCATTATAGGTACTAATAATCTCTTCTACAAACAGATGGA
TAGTGCTGACTGTGCAAGTAGATCTTTAGATAACTATATTATATTGTTTC
AAAATATGAGTCTTCAATAATTTTGCGCAATTTTCGAACTTTTCTCTCAT
TTAGAATCATTTTACGATGATTATGTGAGTATTAAACTGAACGCCCTCAC
TTTTTTTCACCTACGTTTTTTTTCAATTAGAGCTTTAAAATTATTCTCCT
CCGAAACTTGAGCTGCTTGCTAAAGTTCCATTTTGTTTGAGGACTTTTGC
AATGTGGTATGGTCTTCGTTTTTCGCTTGCTGGTAATATGCGAAGTAAAT
TTTGGCCTTAAAGCTCTTGAATCAATTTTCTTTTTCAAATCTTGGACTAA
ATCTTTTTTTTTTTATATGAAGGTGTAAGAACGCTTTCATTATACATTTG
GTTTGTTTTTTTGAAAATTTTCAAAAATGAAACAAAACTGTTTTAAGATT
CATAAAAATGTTATTTTTCTTTAAGTTTGTAAATATAATGAGACTTTTAT
TTTATACTCCTGTCAAACATGAATATGACTTCAAAATATTTTTTTGGTAT
TATATCATGCACGCGCAAAATACCGCAAACTTTTTTGCCATTTTTTATTT
CAATTTTTTCTATGTATGATGATTTTTCACTAAAACATTATATCTTTTTA
TATGTTGTGAATAGATCTGATATAGATACAATTTTTTTTGGTATCTTTGT
AGAAATGTGGAATAAAAATGTCTAAAATTTATTTATGTTTAACACTGTAA
GGTATTTGTGTTTTGGACTTACCCCGGAGGTCCTTTAAATTACCTTATTA
CACGAAAATAAGTAGACATGTAAATAACACGAAA
Gene-mRNA-Prot
This transcript is a part of the following gene feature(s):
The following exon feature(s) are a part of this transcript:
| Feature Name | Unique Name | Species | Type |
|---|
| TCONS_00056491-exon-scaffold_276-1575043694:280624..280834 | TCONS_00056491-exon-scaffold_276-1575043694:280624..280834 | Clytia hemisphaerica | exon |
| TCONS_00056491-exon-scaffold_276-1575043694:270708..270833 | TCONS_00056491-exon-scaffold_276-1575043694:270708..270833 | Clytia hemisphaerica | exon |
| TCONS_00056491-exon-scaffold_276-1575043694:265950..266201 | TCONS_00056491-exon-scaffold_276-1575043694:265950..266201 | Clytia hemisphaerica | exon |
| TCONS_00056491-exon-scaffold_276-1575043694:263851..265267 | TCONS_00056491-exon-scaffold_276-1575043694:263851..265267 | Clytia hemisphaerica | exon |
| TCONS_00056491-exon-scaffold_276-1510915933:280624..280834 | TCONS_00056491-exon-scaffold_276-1510915933:280624..280834 | Clytia hemisphaerica | exon |
| TCONS_00056491-exon-scaffold_276-1510915933:270708..270833 | TCONS_00056491-exon-scaffold_276-1510915933:270708..270833 | Clytia hemisphaerica | exon |
| TCONS_00056491-exon-scaffold_276-1510915933:265950..266201 | TCONS_00056491-exon-scaffold_276-1510915933:265950..266201 | Clytia hemisphaerica | exon |
| TCONS_00056491-exon-scaffold_276-1510915933:263851..265267 | TCONS_00056491-exon-scaffold_276-1510915933:263851..265267 | Clytia hemisphaerica | exon |
| TCONS_00056491-exon-scaffold_276-1491911889:280624..280834 | TCONS_00056491-exon-scaffold_276-1491911889:280624..280834 | Clytia hemisphaerica | exon |
| TCONS_00056491-exon-scaffold_276-1491911889:270708..270833 | TCONS_00056491-exon-scaffold_276-1491911889:270708..270833 | Clytia hemisphaerica | exon |
| TCONS_00056491-exon-scaffold_276-1491911889:265950..266201 | TCONS_00056491-exon-scaffold_276-1491911889:265950..266201 | Clytia hemisphaerica | exon |
| TCONS_00056491-exon-scaffold_276-1491911889:263851..265267 | TCONS_00056491-exon-scaffold_276-1491911889:263851..265267 | Clytia hemisphaerica | exon |
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_276 | supercontig | scaffold_276:263851..280834 - |
Blast
BLAST of TCONS_00056491 vs. Swiss-Prot (Human)
Match: MSRA (Mitochondrial peptide methionine sulfoxide reductase OS=Homo sapiens GN=MSRA PE=1 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 5.229e-23 Identity = 59/156 (37.82%), Postives = 82/156 (52.56%), Query Frame = 3
Query: 189 EMVPKEFNKATFAMS*FWFPEAQFGCARGVLRTKVGYTGGRKVNPTYHSLGD----HTETMQVDFDPTQTNYTNLLQLFWENHDAT------SRNKAQYMSAIFFHDEEQRELAEQTMLEHQKKVPR----PITTKILPAETFYDAEDYHQKYLLR 614
E P+ A F M FW E +F +GV T+VG+ GG NPTY + H E ++V + P ++ LL++FWENHD T + + QY SAI+ +Q E A + +QK + PITT I +TFY AEDYHQ+YL +
Sbjct: 59 EPFPEGTQMAVFGMGCFWGAERKFWVLKGVYSTQVGFAGGYTSNPTYKEVCSEKTGHAEVVRVVYQPEHMSFEELLKVFWENHDPTQGMRQGNDHGTQYRSAIYPTSAKQMEAALSSKENYQKVLSEHGFGPITTDIREGQTFYYAEDYHQQYLSK 214
The following BLAST results are available for this feature:
|
